Homology
BLAST of Lag0019687 vs. NCBI nr
Match:
XP_012461392.1 (PREDICTED: uncharacterized protein LOC105781396 [Gossypium raimondii])
HSP 1 Score: 216.5 bits (550), Expect = 2.7e-52
Identity = 122/310 (39.35%), Postives = 165/310 (53.23%), Query Frame = 0
Query: 3 EDTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANR 62
+D + CL ILN EI PIN T I LIPK +P TM +FR ISLCNV+YK+I K LANR
Sbjct: 169 DDVLSFCLQILNGNMEISPINTTNIVLIPKVSNPSTMMQFRPISLCNVLYKIIAKVLANR 228
Query: 63 MKQLLESIISPSQLASSPEDR-SQIMCWWVRVYPRSKQQRIGKTGYVAIKLDMSKAYDRV 122
+ ++ I +Q A P S + + + KQ+R GK G++A+KLDMSKAYDRV
Sbjct: 229 FRSVIGKCIDEAQSAFVPGRLISDNVLLTYEILHKLKQKRTGKKGFMAVKLDMSKAYDRV 288
Query: 123 EWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLF 182
EW IEE MK+MGF W+ +M C+SSV+YSV++NG + + F P+RGLRQ DPLSP+LF
Sbjct: 289 EWKLIEEVMKKMGFDFSWVNAIMKCVSSVAYSVVINGYRGDKFVPTRGLRQGDPLSPFLF 348
Query: 183 LLCAE------------------------------------------------------- 242
L+C E
Sbjct: 349 LICGEGLSSLLRLAMKRDRLKGVRVSRYGPQVSHLLFADDCILFGEATSRGANIIKDILC 408
Query: 243 ------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAV 251
GQ +N +KS SKN EE + LG++R++ +YLG+P+ GR K
Sbjct: 409 EFKVCSGQCVNFDKSTVFFSKNTLEEDRGQVVDVLGVRRTSEPERYLGLPNMVGRKKKES 468
BLAST of Lag0019687 vs. NCBI nr
Match:
KAA3465168.1 (reverse transcriptase [Gossypium australe])
HSP 1 Score: 208.0 bits (528), Expect = 9.6e-50
Identity = 120/281 (42.70%), Postives = 154/281 (54.80%), Query Frame = 0
Query: 3 EDTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANR 62
+D + CL ILN ++EI INKT I LIPK +PK MS FR ISLCNVIYK+I K L N+
Sbjct: 108 QDISRYCLDILNGKKEIGDINKTRIVLIPKIDNPKNMSHFRPISLCNVIYKIIAKVLVNQ 167
Query: 63 MKQLLESIISPSQLASSPEDR-SQIMCWWVRVYPRSKQQRIGKTGYVAIKLDMSKAYDRV 122
M Q+L I+ +Q A P S + V K +R G+ G +KLDMSKAYD V
Sbjct: 168 MSQILGDCINEAQGAFIPGRLISDSVLIAYEVLHSLKMKRSGRRGNFTLKLDMSKAYDHV 227
Query: 123 EWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLF 182
EW Y+ MK +GF W+ +M C++SVSYSV +NG + F P RGLRQ DPL+PYLF
Sbjct: 228 EWDYLAGMMKSLGFHDDWMVLIMRCVTSVSYSVSLNGMRSNWFSPLRGLRQGDPLNPYLF 287
Query: 183 LLCAE----------------------------GQTINLEKSIFMASKNVKEETLAKCEV 242
L+CAE GQ +N KS+ NVKEE
Sbjct: 288 LICAEDDCIIFGDATHVGVSTVRDIIREYEMSAGQKVNYNKSLIYFGANVKEEIKGDIIR 347
Query: 243 ALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG 255
LG++ +++ +YLG+P GR K F KDR K + G
Sbjct: 348 TLGVRVASNRKKYLGLPMMVGRRKAWAFASFKDRFRKRVDG 388
BLAST of Lag0019687 vs. NCBI nr
Match:
KAA3468713.1 (reverse transcriptase [Gossypium australe])
HSP 1 Score: 206.8 bits (525), Expect = 2.1e-49
Identity = 124/285 (43.51%), Postives = 155/285 (54.39%), Query Frame = 0
Query: 9 CLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLE 68
CL ILN ++EI INKT I LIPK +PK MS F+ ISLCNVIYK+I K L NRM +L
Sbjct: 196 CLDILNEQKEIGDINKTRIVLIPKIDNPKNMSYFQPISLCNVIYKIIPKVLVNRMSDILG 255
Query: 69 SIISPSQLASSP----EDRSQIMCWWVRVYPRSKQQRIGKTGYVAIKLDMSKAYDRVEWV 128
I+ +Q A P D I C V K ++ G+ G A+KLDMSKAYDRVEW
Sbjct: 256 DCINEAQGAFIPGKLISDNVLIAC---EVLHSLKMKKNGRRGNFALKLDMSKAYDRVEWD 315
Query: 129 YIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLC 188
++ MK +GF W+ +M CI+SVSYSV +NG + F PSRGLRQ DPLSPYLFLLC
Sbjct: 316 FLAGMMKSLGFHNDWMVLIMRCITSVSYSVSLNGMCSDWFSPSRGLRQGDPLSPYLFLLC 375
Query: 189 AE-----------------------------------GQTINLEKSIFMASKNVKEETLA 248
AE GQ +N +KS+ NVKEE
Sbjct: 376 AEGFSTLLEDAKQKGRMRGASGVCTVRYIIREYEMSAGQKVNYDKSLIYFGANVKEEVNE 435
Query: 249 KCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG 255
LG++ ++S +YLG+P GR K F KD+ K + G
Sbjct: 436 DIIRVLGVRVASSPEKYLGLPMMVGRRKAWAFANFKDKFRKRVDG 477
BLAST of Lag0019687 vs. NCBI nr
Match:
XP_042952177.1 (uncharacterized protein LOC122289261 [Carya illinoinensis])
HSP 1 Score: 205.7 bits (522), Expect = 4.8e-49
Identity = 115/258 (44.57%), Postives = 163/258 (63.18%), Query Frame = 0
Query: 3 EDTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANR 62
E+ K L ILN EI IN+T I LIPK K+P+T+ +F+ ISLCNVIYKV++K L+NR
Sbjct: 389 EEVTKAVLDILNGNGEISHINETYIVLIPKVKNPQTVMDFKPISLCNVIYKVVSKTLSNR 448
Query: 63 MKQLLESIISPSQLA--SSPEDRSQIMCWWVRVYPRSKQQRIGKTGYVAIKLDMSKAYDR 122
+K +L SII+P+Q A + ++ + ++ S + + G+ GY+AIKLD+SKA+DR
Sbjct: 449 LKLILPSIIAPTQSAFIQGRMIQDNVIVAFETLHSMSIKGK-GQQGYMAIKLDLSKAFDR 508
Query: 123 VEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYL 182
VEW ++ + M +MGF+ WI M C+++VSYS L+NG+ Q +F PSRG+RQ DPLSPYL
Sbjct: 509 VEWEFLAKVMAKMGFNRRWIFLTMQCVTTVSYSTLINGKPQGNFSPSRGIRQGDPLSPYL 568
Query: 183 FLLCAE----------GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMP 242
F+L AE GQ +N K+ S N + T + S+ +YLG+P
Sbjct: 569 FILVAEVILNLYEEASGQKLNKSKTSIYFSPNTRPATREYILSLAQTRASSCYERYLGLP 628
Query: 243 SQTGRNKGAVFKRIKDRV 249
+ GR+K A FK I DRV
Sbjct: 629 NLIGRSKYAAFKGILDRV 645
BLAST of Lag0019687 vs. NCBI nr
Match:
XP_028068804.1 (uncharacterized protein LOC114271378 [Camellia sinensis])
HSP 1 Score: 205.3 bits (521), Expect = 6.2e-49
Identity = 125/310 (40.32%), Postives = 165/310 (53.23%), Query Frame = 0
Query: 7 KTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQL 66
+ LG+LN + + +N T I LIPK K PK MS+FR ISLCNV+YK+++K LANRM+++
Sbjct: 412 RAVLGVLNEGKAVTAMNDTFIVLIPKVKSPKRMSQFRPISLCNVVYKLVSKVLANRMRKI 471
Query: 67 LESIISPSQLA-SSPEDRSQIMCWWVRVYPRSKQQRIGKTGYVAIKLDMSKAYDRVEWVY 126
L IIS +Q A + S M ++ K +R GK G+ A+KLDMSKAYDRVEW +
Sbjct: 472 LPDIISMNQSAFVAGRLISDNMLASFEIFHFLKNKRHGKEGHFALKLDMSKAYDRVEWSF 531
Query: 127 IEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCA 186
+ M++MGF+ ++ ++ CISSVSYSVLVNG + F P+RGLRQ DPLSPYLF+LCA
Sbjct: 532 LRGVMERMGFNQLFVDTIVHCISSVSYSVLVNGSPIKKFVPTRGLRQGDPLSPYLFVLCA 591
Query: 187 E----------------------------------------------------------- 246
E
Sbjct: 592 EGLSALIKRAEGEGKLTGVAVCRGSPRVSHLLFADDSLLFGAANMQELVVVQDILGKYEL 651
Query: 247 --GQTINLEKSIFMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRI 255
GQ INLEKS SKNV + A A+G+ G+YLG+P GR+K +F +
Sbjct: 652 VSGQKINLEKSAICFSKNVGIDIQAGLRNAMGVGNLVDSGKYLGLPYIVGRSKRGIFNSV 711
BLAST of Lag0019687 vs. ExPASy Swiss-Prot
Match:
P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)
HSP 1 Score: 82.0 bits (201), Expect = 1.0e-14
Identity = 63/222 (28.38%), Postives = 105/222 (47.30%), Query Frame = 0
Query: 27 IALIPK-SKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDRSQ 86
I LIPK KDP + FR ISL N+ K++ K LANR+++ +++II P Q+ P
Sbjct: 521 ITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPG---- 580
Query: 87 IMCWWVRVYPRSKQ----QRIGKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQ 146
M W + ++ ++ I LD KA+D+++ ++ + +++ G ++
Sbjct: 581 -MQGWFNIRKSINVIHYINKLKDKNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLN 640
Query: 147 KVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE--GQTINLE---KSI 206
+ + S ++ VNGE+ E G RQ PLSPYLF + E + I + K I
Sbjct: 641 MIKAIYSKPVANIKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVLEVLARAIRQQKEIKGI 700
Query: 207 FMASKNVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKG 239
+ + VK LA + NS + L + + G G
Sbjct: 701 QIGKEEVKISLLADDMIVYISDPKNSTRELLNLINSFGEVVG 737
BLAST of Lag0019687 vs. ExPASy Swiss-Prot
Match:
P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)
HSP 1 Score: 76.6 bits (187), Expect = 4.4e-13
Identity = 57/216 (26.39%), Postives = 105/216 (48.61%), Query Frame = 0
Query: 2 REDTMKTCLGILNNREEIEPINKTL----IALIPK-SKDPKTMSEFRSISLCNVIYKVIT 61
+E+ + L + N E+ + T I LIPK KDP +R ISL N+ K++
Sbjct: 484 KEELVPILLNLFQNIEKEGILPNTFYEANITLIPKPGKDPTRKENYRPISLMNIDAKILN 543
Query: 62 KALANRMKQLLESIISPSQLASSPEDRSQIMCWWVRVYPRSKQQRIGK---TGYVAIKLD 121
K L NR++Q ++ II Q+ P + W+ + Q I K ++ + +D
Sbjct: 544 KILTNRIQQHIKKIIHHDQVGFIPGSQG----WFNIRKSINVIQHINKLKNKDHMILSID 603
Query: 122 MSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQR 181
KA+D ++ ++ ++K++G +++ + + S + ++++NG + + F G RQ
Sbjct: 604 AEKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKPTANIILNGVKLKSFPLRSGTRQG 663
Query: 182 DPLSPYLFLLCAEGQTINLE-----KSIFMASKNVK 205
PLSP LF + E I + K I + S+ +K
Sbjct: 664 CPLSPLLFNIVMEVLAIAIREEKAIKGIHIGSEEIK 695
BLAST of Lag0019687 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 75.1 bits (183), Expect = 1.3e-12
Identity = 59/215 (27.44%), Postives = 104/215 (48.37%), Query Frame = 0
Query: 27 IALIPK-SKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDRSQ 86
I LIPK +D FR ISL N+ K++ K LANR++Q ++ +I Q+ P
Sbjct: 514 IILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG---- 573
Query: 87 IMCWWVRVYPR----SKQQRIGKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQ 146
M W + R +V I +D KA+D+++ ++ +++ ++G +++
Sbjct: 574 -MQGWFNIRKSINVIQHINRAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLK 633
Query: 147 KVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAEGQTINLEKSIFMASK 206
+ + + ++++NG++ E F G RQ PLSP LF + E L ++I K
Sbjct: 634 IIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE----VLARAI-RQEK 693
Query: 207 NVKEETLAKCEVALGIKRSNSLGQYLGMPSQTGRN 237
+K L K EV L + + + YL P + +N
Sbjct: 694 EIKGIQLGKEEVKLSLFADDMI-VYLENPIVSAQN 717
BLAST of Lag0019687 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 66.2 bits (160), Expect = 5.9e-10
Identity = 44/163 (26.99%), Postives = 80/163 (49.08%), Query Frame = 0
Query: 24 KTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDR 83
+ +++L+PK D + + +R +SL + YK++ KA++ R+K +L +I P Q + P
Sbjct: 507 RAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRT 566
Query: 84 SQIMCWWVRVYPRSKQQRIGKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKV 143
+ +R +R G + LD KA+DRV+ Y+ +++ F P ++ +
Sbjct: 567 IFDNVFLIRDLLHF-ARRTG-LSLAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYL 626
Query: 144 MSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE 187
+ +S V +N RG+RQ PLS L+ L E
Sbjct: 627 KTMYASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIE 667
BLAST of Lag0019687 vs. ExPASy Swiss-Prot
Match:
P16423 (Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 2.5e-08
Identity = 45/154 (29.22%), Postives = 75/154 (48.70%), Query Frame = 0
Query: 30 IPKSKDPKTMSEFRSISLCNVIYKVITKALANRMKQLLESIISPSQLASSPEDRSQIMCW 89
IPK+ K +FR IS+ +V+ + + LA R+ + P Q P D
Sbjct: 403 IPKTVTAKRPQDFRPISVPSVLVRQLNAILATRLNSSIN--WDPRQRGFLPTDGCADNAT 462
Query: 90 WVRVYPRSKQQRIGKTGYVAIKLDMSKAYDRVEWVYIEESMKQMGFSPCWIQKVMSCISS 149
V + R + ++ Y+A LD+SKA+D + I ++++ G ++ V +
Sbjct: 463 IVDLVLRHSHKHF-RSCYIA-NLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEG 522
Query: 150 VSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFLL 184
S+ +G E+F P+RG++Q DPLSP LF L
Sbjct: 523 GGTSLNGDGWSSEEFVPARGVKQGDPLSPILFNL 552
BLAST of Lag0019687 vs. ExPASy TrEMBL
Match:
M5XK32 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa016563mg PE=4 SV=1)
HSP 1 Score: 212.2 bits (539), Expect = 2.5e-51
Identity = 120/287 (41.81%), Postives = 165/287 (57.49%), Query Frame = 0
Query: 3 EDTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANR 62
+D + L + + + +N T + LIPK K+P+TM++ R ISLCNV+Y++ K LANR
Sbjct: 64 DDVVAAIRAFLQSNDMLRQLNHTFVTLIPKVKEPRTMAQLRPISLCNVLYRIGAKTLANR 123
Query: 63 MKQLLESIISPSQLASSP----EDRSQIMCWWVRVYPRSKQQRIGKTGYVAIKLDMSKAY 122
MK +++S+IS SQ A P D S + + KQ+R G+ G +A+KLDMSKAY
Sbjct: 124 MKFVMQSVISESQSAFVPGRLITDNSIVA---FEIAHFLKQRRRGRKGSLALKLDMSKAY 183
Query: 123 DRVEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSP 182
DRVEW ++E+ M MGF W++ VM C+++VSYS LVNGE P+RGLRQ DPLSP
Sbjct: 184 DRVEWEFLEKMMLAMGFPILWVRMVMDCVTTVSYSFLVNGEPTRILYPTRGLRQGDPLSP 243
Query: 183 YLFLLCAE-------------------------------GQTINLEKSIFMASKNVKEET 242
YLFLLCAE G+ IN +KS S N+ +T
Sbjct: 244 YLFLLCAEVLPHDSFVFAKATDNNCGVLKHIFEVYERASGEQINCQKSCVAFSANIHMDT 303
Query: 243 LAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG 255
++ LG+ R +S YLG+P GRNK F+ +K+RV K LQG
Sbjct: 304 QSRLASVLGVPRVDSHATYLGLPMMLGRNKTFCFRYLKERVWKKLQG 347
BLAST of Lag0019687 vs. ExPASy TrEMBL
Match:
A0A2N9J6I3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60908 PE=4 SV=1)
HSP 1 Score: 211.5 bits (537), Expect = 4.2e-51
Identity = 119/278 (42.81%), Postives = 159/278 (57.19%), Query Frame = 0
Query: 4 DTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRM 63
D + L LNN ++ +N T IALIPK K P+ M++FR ISLCNV+YK+I+K L NRM
Sbjct: 963 DVTDSILDFLNNGHMLKSLNYTHIALIPKVKSPELMTQFRPISLCNVLYKIISKVLVNRM 1022
Query: 64 KQLLESIISPSQLASSPEDR-SQIMCWWVRVYPRSKQQRIGKTGYVAIKLDMSKAYDRVE 123
K +L ++S SQ A P S + + K +R+GK +A+KLDMSKAYDRVE
Sbjct: 1023 KTILPFVVSDSQSAFVPGRMISDNIMIAFEILHHLKNKRVGKVPQMAVKLDMSKAYDRVE 1082
Query: 124 WVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFL 183
W Y+++ M ++GF+ W+ +M C++SVSYS+LVNGE + KPSRGLRQ DPLSPYLFL
Sbjct: 1083 WDYLKKMMLKLGFTARWVALIMECVTSVSYSILVNGEPKGYVKPSRGLRQGDPLSPYLFL 1142
Query: 184 LCAE--------------------------GQTINLEKSIFMASKNVKEETLAKCEVALG 243
+CAE GQ IN K+ S+N A G
Sbjct: 1143 ICAEGLTALLRKAERESVMQGISICRGGPQGQKINTAKTALFFSQNASPIVKASILNFFG 1202
Query: 244 IKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG 255
+ +YLG+P GR+K F IKDR+ + LQG
Sbjct: 1203 TSPTTQFEKYLGLPPVIGRSKKQAFSEIKDRIWRRLQG 1240
BLAST of Lag0019687 vs. ExPASy TrEMBL
Match:
A0A2N9J6K4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59981 PE=4 SV=1)
HSP 1 Score: 211.1 bits (536), Expect = 5.5e-51
Identity = 119/279 (42.65%), Postives = 159/279 (56.99%), Query Frame = 0
Query: 4 DTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRM 63
D + L LNN ++ +N T IALIPK K P+ M++FR ISLCNV+YK+I+K L NRM
Sbjct: 349 DVTDSILDFLNNGHMLKSLNYTHIALIPKVKSPELMTQFRPISLCNVLYKIISKVLVNRM 408
Query: 64 KQLLESIISPSQLASSPEDR-SQIMCWWVRVYPRSKQQRIGKTGYVAIKLDMSKAYDRVE 123
K +L ++S SQ A P S + + K +R+GK +A+KLDMSKAYDRVE
Sbjct: 409 KTILPFVVSDSQSAFVPGRMISDNIMIAFEILHHLKNKRVGKVPQMAVKLDMSKAYDRVE 468
Query: 124 WVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLFL 183
W Y+++ M ++GF+ W+ +M C++SVSYS+LVNGE + KPSRGLRQ DPLSPYLFL
Sbjct: 469 WDYLKKMMLKLGFTARWVALIMECVTSVSYSILVNGEPKGYVKPSRGLRQGDPLSPYLFL 528
Query: 184 LCAE---------------------------GQTINLEKSIFMASKNVKEETLAKCEVAL 243
+CAE GQ IN K+ S+N A
Sbjct: 529 ICAEGLTAFIAATDTECQALQDILTLYESASGQKINTAKTALFFSQNASPIVKASILNFF 588
Query: 244 GIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG 255
G + +YLG+P GR+K F IKDR+ + LQG
Sbjct: 589 GTSPTTQFEKYLGLPPVIGRSKKQAFSEIKDRIWRRLQG 627
BLAST of Lag0019687 vs. ExPASy TrEMBL
Match:
A0A2N9EK17 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7109 PE=4 SV=1)
HSP 1 Score: 210.7 bits (535), Expect = 7.2e-51
Identity = 121/290 (41.72%), Postives = 164/290 (56.55%), Query Frame = 0
Query: 4 DTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANRM 63
D + L L + ++ +N T IALIPK +++S+FR ISLCNV+YK+I+K LANRM
Sbjct: 27 DVLTAVLDCLRSGHILKSLNSTNIALIPKVGKAESLSQFRPISLCNVVYKIISKVLANRM 86
Query: 64 KQLLESIISPSQLASSPE---DRSQIMCWWVRVYPRSKQQRIGKTGYVAIKLDMSKAYDR 123
K +L +IS Q A PE + ++ + V Y +K+Q GKT ++A KLDMSKAYDR
Sbjct: 87 KSILSVVISDYQSAFVPERLITDNILIAFEVMHYLNTKRQ--GKTAHMAAKLDMSKAYDR 146
Query: 124 VEWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYL 183
VEW Y++ M +MGF W+ +M C+S+V+YSVL+NGE +PSRGLRQ DPLSPYL
Sbjct: 147 VEWNYLQAVMLKMGFESRWVNLIMECLSTVNYSVLINGEPHGYIRPSRGLRQGDPLSPYL 206
Query: 184 FLLCAE------------------------------------GQTINLEKSIFMASKNVK 243
FL+CAE GQ +N EKS F SKN
Sbjct: 207 FLICAEGLSALFRAAERERRLCALQSDSMALKEILHNYEMASGQQLNFEKSAFFFSKNTP 266
Query: 244 EETLAKCEVALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG 255
++ LG +++ G+YLG+P GR K F+ K R+ K LQG
Sbjct: 267 QQIKEDISTILGTSLTSNFGKYLGLPPLIGRKKRQAFEENKTRIWKRLQG 314
BLAST of Lag0019687 vs. ExPASy TrEMBL
Match:
A0A5B6V7P4 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_000369 PE=4 SV=1)
HSP 1 Score: 208.0 bits (528), Expect = 4.7e-50
Identity = 120/281 (42.70%), Postives = 154/281 (54.80%), Query Frame = 0
Query: 3 EDTMKTCLGILNNREEIEPINKTLIALIPKSKDPKTMSEFRSISLCNVIYKVITKALANR 62
+D + CL ILN ++EI INKT I LIPK +PK MS FR ISLCNVIYK+I K L N+
Sbjct: 108 QDISRYCLDILNGKKEIGDINKTRIVLIPKIDNPKNMSHFRPISLCNVIYKIIAKVLVNQ 167
Query: 63 MKQLLESIISPSQLASSPEDR-SQIMCWWVRVYPRSKQQRIGKTGYVAIKLDMSKAYDRV 122
M Q+L I+ +Q A P S + V K +R G+ G +KLDMSKAYD V
Sbjct: 168 MSQILGDCINEAQGAFIPGRLISDSVLIAYEVLHSLKMKRSGRRGNFTLKLDMSKAYDHV 227
Query: 123 EWVYIEESMKQMGFSPCWIQKVMSCISSVSYSVLVNGEQQEDFKPSRGLRQRDPLSPYLF 182
EW Y+ MK +GF W+ +M C++SVSYSV +NG + F P RGLRQ DPL+PYLF
Sbjct: 228 EWDYLAGMMKSLGFHDDWMVLIMRCVTSVSYSVSLNGMRSNWFSPLRGLRQGDPLNPYLF 287
Query: 183 LLCAE----------------------------GQTINLEKSIFMASKNVKEETLAKCEV 242
L+CAE GQ +N KS+ NVKEE
Sbjct: 288 LICAEDDCIIFGDATHVGVSTVRDIIREYEMSAGQKVNYNKSLIYFGANVKEEIKGDIIR 347
Query: 243 ALGIKRSNSLGQYLGMPSQTGRNKGAVFKRIKDRVEKILQG 255
LG++ +++ +YLG+P GR K F KDR K + G
Sbjct: 348 TLGVRVASNRKKYLGLPMMVGRRKAWAFASFKDRFRKRVDG 388
BLAST of Lag0019687 vs. TAIR 10
Match:
AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )
HSP 1 Score: 58.2 bits (139), Expect = 1.1e-08
Identity = 26/85 (30.59%), Postives = 50/85 (58.82%), Query Frame = 0
Query: 59 LANRMKQLLESIISPSQLASSPEDRSQIMCWWVRVYPRSKQQRIGKTGYVAIKLDMSKAY 118
+ R+K L+ ++I P+Q + P S +V+ S +++ G G++ +KLD+ KAY
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60
Query: 119 DRVEWVYIEESMKQMGFSPCWIQKV 144
DR+ W Y+E+++ GF W+ ++
Sbjct: 61 DRIRWDYLEDTLISAGFPEVWLPEI 85
BLAST of Lag0019687 vs. TAIR 10
Match:
ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )
HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05
Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 0
Query: 155 LVNGEQQEDFKPSRGLRQRDPLSPYLFLLCAE 187
++NG Q PSRGLRQ DPLSPYLF+LC E
Sbjct: 13 IINGAPQGLVTPSRGLRQGDPLSPYLFILCTE 44
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P11369 | 1.0e-14 | 28.38 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... | [more] |
P08548 | 4.4e-13 | 26.39 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 | [more] |
O00370 | 1.3e-12 | 27.44 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
P14381 | 5.9e-10 | 26.99 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
P16423 | 2.5e-08 | 29.22 | Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS... | [more] |
Match Name | E-value | Identity | Description | |
M5XK32 | 2.5e-51 | 41.81 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... | [more] |
A0A2N9J6I3 | 4.2e-51 | 42.81 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60908 PE=4 SV=1 | [more] |
A0A2N9J6K4 | 5.5e-51 | 42.65 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A2N9EK17 | 7.2e-51 | 41.72 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A5B6V7P4 | 4.7e-50 | 42.70 | Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_000369 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G20520.1 | 1.1e-08 | 30.59 | RNA binding;RNA-directed DNA polymerases | [more] |
ATMG01250.1 | 1.2e-05 | 65.63 | RNA-directed DNA polymerase (reverse transcriptase) | [more] |