Lag0019632 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0019632
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr5: 44049285 .. 44049731 (+)
RNA-Seq Expression	Lag0019632
Synteny	Lag0019632

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCAAGAATCTCCTTTTCAAATGATTTTGTTGAGACTCAACAGCCATTGAAGCTTGAGAACATCTACAGAGAAGCACCTGTTTCTTCTGATTTTGAGTTCAGTGTTAAGGACAGATGTATGATAGCAGCAGATGAGATTTTCTTTCAGGGGAGGCTGCTGCCATTGAAGGACAGTTCAAGGAATCTTTTGGTGAAGACAACTTTAAGAGATGAGTTGCAAGTGAATGAAGATGATGAGGATGAGGATGAGGATGTTTCATTTCCAAAGCTAACAAAAACTTCTGCTAGCTGCTGGAAGGAGAGATTTGGCTTCAGGAGATCTCATTTTCTTCCAAAGAAACAGCATAGAACTGAAGGGGTCTTGAAAACTGTGGAAGAGGAAGAGAAAACTTCTGTGTTTCTTCATGAGGACCTCATAAATATTGCAAGAAAAAATGGGTAA

mRNA sequence

ATGGATCCAAGAATCTCCTTTTCAAATGATTTTGTTGAGACTCAACAGCCATTGAAGCTTGAGAACATCTACAGAGAAGCACCTGTTTCTTCTGATTTTGAGTTCAGTGTTAAGGACAGATGTATGATAGCAGCAGATGAGATTTTCTTTCAGGGGAGGCTGCTGCCATTGAAGGACAGTTCAAGGAATCTTTTGGTGAAGACAACTTTAAGAGATGAGTTGCAAGTGAATGAAGATGATGAGGATGAGGATGAGGATGTTTCATTTCCAAAGCTAACAAAAACTTCTGCTAGCTGCTGGAAGGAGAGATTTGGCTTCAGGAGATCTCATTTTCTTCCAAAGAAACAGCATAGAACTGAAGGGGTCTTGAAAACTGTGGAAGAGGAAGAGAAAACTTCTGTGTTTCTTCATGAGGACCTCATAAATATTGCAAGAAAAAATGGGTAA

Coding sequence (CDS)

ATGGATCCAAGAATCTCCTTTTCAAATGATTTTGTTGAGACTCAACAGCCATTGAAGCTTGAGAACATCTACAGAGAAGCACCTGTTTCTTCTGATTTTGAGTTCAGTGTTAAGGACAGATGTATGATAGCAGCAGATGAGATTTTCTTTCAGGGGAGGCTGCTGCCATTGAAGGACAGTTCAAGGAATCTTTTGGTGAAGACAACTTTAAGAGATGAGTTGCAAGTGAATGAAGATGATGAGGATGAGGATGAGGATGTTTCATTTCCAAAGCTAACAAAAACTTCTGCTAGCTGCTGGAAGGAGAGATTTGGCTTCAGGAGATCTCATTTTCTTCCAAAGAAACAGCATAGAACTGAAGGGGTCTTGAAAACTGTGGAAGAGGAAGAGAAAACTTCTGTGTTTCTTCATGAGGACCTCATAAATATTGCAAGAAAAAATGGGTAA

Protein sequence

MDPRISFSNDFVETQQPLKLENIYREAPVSSDFEFSVKDRCMIAADEIFFQGRLLPLKDSSRNLLVKTTLRDELQVNEDDEDEDEDVSFPKLTKTSASCWKERFGFRRSHFLPKKQHRTEGVLKTVEEEEKTSVFLHEDLINIARKNG

Homology

[Close]

BLAST of Lag0019632 vs. NCBI nr
Match: XP_022942817.1 (uncharacterized protein LOC111447733 [Cucurbita moschata])

HSP 1 Score: 261.9 bits (668), Expect = 3.3e-66
Identity = 132/148 (89.19%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MDPRISFSNDFVETQQPLKLENIYREAPVSSDFEFSVKDRCMIAADEIFFQGRLLPLKDS 60
           MDPRISFSNDFVETQ PLKLENIYREAPVSSDFEFSVKDRCMIAADEIF QGRLLPLKDS
Sbjct: 1   MDPRISFSNDFVETQLPLKLENIYREAPVSSDFEFSVKDRCMIAADEIFCQGRLLPLKDS 60

Query: 61  SRNLLVKTTLRDELQVNEDDEDEDEDVSFPKLTKTSASCWKERFGFRRSHFLPKKQHRTE 120
           SRNLLVKTTLRDELQVNEDD++E+EDVSFPKLTKT    WKE+FGFRRSHF+ +KQHR E
Sbjct: 61  SRNLLVKTTLRDELQVNEDDDEEEEDVSFPKLTKT---YWKEKFGFRRSHFVSRKQHRNE 120

Query: 121 GVLKTVEEEEKTSVFLHEDLINIARKNG 149
           GVLKTVEEE+K+SVFLHEDLINIARKNG
Sbjct: 121 GVLKTVEEEDKSSVFLHEDLINIARKNG 145

[Close]

BLAST of Lag0019632 vs. NCBI nr
Match: KAG6600329.1 (hypothetical protein SDJN03_05562, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030986.1 hypothetical protein SDJN02_05024, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.9 bits (668), Expect = 3.3e-66
Identity = 132/148 (89.19%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MDPRISFSNDFVETQQPLKLENIYREAPVSSDFEFSVKDRCMIAADEIFFQGRLLPLKDS 60
           MDPRISFSNDFVETQ PLKLENIYREAPVSSDFEFSVKDRCMIAADEIF QGRLLPLKDS
Sbjct: 1   MDPRISFSNDFVETQLPLKLENIYREAPVSSDFEFSVKDRCMIAADEIFCQGRLLPLKDS 60

Query: 61  SRNLLVKTTLRDELQVNEDDEDEDEDVSFPKLTKTSASCWKERFGFRRSHFLPKKQHRTE 120
           SRNLLVKTTLRDELQVNEDD++E+EDVSFPKLTKT    WKE+FGFRRSHF+ +KQHR E
Sbjct: 61  SRNLLVKTTLRDELQVNEDDDEEEEDVSFPKLTKT---YWKEKFGFRRSHFVSRKQHRNE 120

Query: 121 GVLKTVEEEEKTSVFLHEDLINIARKNG 149
           GVLKTVEEE+K+SVFLHEDLINIARKNG
Sbjct: 121 GVLKTVEEEDKSSVFLHEDLINIARKNG 145

[Close]

BLAST of Lag0019632 vs. NCBI nr
Match: XP_022983127.1 (uncharacterized protein LOC111481767 [Cucurbita maxima])

HSP 1 Score: 259.6 bits (662), Expect = 1.6e-65
Identity = 134/148 (90.54%), Postives = 139/148 (93.92%), Query Frame = 0


Query: 1   MDPRISFSNDFVETQQPLKLENIYREAPVSSDFEFSVKDRCMIAADEIFFQGRLLPLKDS 60
           MDPRISFSNDFVETQ PLKLENIYREAPVSSDFEFSVKDRCMIAADEIF QGRLLPLKDS
Sbjct: 1   MDPRISFSNDFVETQLPLKLENIYREAPVSSDFEFSVKDRCMIAADEIFCQGRLLPLKDS 60

Query: 61  SRNLLVKTTLRDELQVNEDDEDEDEDVSFPKLTKTSASCWKERFGFRRSHFLPKKQHRTE 120
           SRNLLVKTTLRDELQVNEDD DE+EDVSFPKLTKT    WKE+FGFRRSHF+ KKQHR E
Sbjct: 61  SRNLLVKTTLRDELQVNEDD-DEEEDVSFPKLTKT---YWKEKFGFRRSHFVSKKQHRNE 120

Query: 121 GVLKTVEEEEKTSVFLHEDLINIARKNG 149
           GVLKTVEEE+K+SVFLHEDLINIARKNG
Sbjct: 121 GVLKTVEEEDKSSVFLHEDLINIARKNG 144

[Close]

BLAST of Lag0019632 vs. NCBI nr
Match: XP_023516088.1 (uncharacterized protein LOC111780054 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 132/149 (88.59%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MDPRISFSNDFVETQQPLKLENIYREAPVSSDFEFSVKDRCMIAADEIFFQGRLLPLKDS 60
           MDPRISFSNDFVETQ PLKLENIYREAPVSSDFEFSVKDRCMIAADEIF QGRLLPLK+S
Sbjct: 1   MDPRISFSNDFVETQLPLKLENIYREAPVSSDFEFSVKDRCMIAADEIFCQGRLLPLKES 60

Query: 61  SRNLLVKTTLRDELQVNE-DDEDEDEDVSFPKLTKTSASCWKERFGFRRSHFLPKKQHRT 120
           SRNLLVKTTLRDELQVNE DDE+E+EDVSFPKLTKT    WKE+FGFRRSHF+ +KQHR 
Sbjct: 61  SRNLLVKTTLRDELQVNEDDDEEEEEDVSFPKLTKT---YWKEKFGFRRSHFVSRKQHRN 120

Query: 121 EGVLKTVEEEEKTSVFLHEDLINIARKNG 149
           EGVLKTVEEE+K+SVFLHEDLINIARKNG
Sbjct: 121 EGVLKTVEEEDKSSVFLHEDLINIARKNG 146

[Close]

BLAST of Lag0019632 vs. NCBI nr
Match: XP_038877999.1 (uncharacterized protein LOC120070205 [Benincasa hispida])

HSP 1 Score: 256.5 bits (654), Expect = 1.4e-64
Identity = 132/151 (87.42%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 1   MDPRISFSNDFVETQQPLKLENIYREAPVSSDFEFSVKDRCMIAADEIFFQGRLLPLKDS 60
           MDPRISFSNDFVET+Q LK+ENIYREAPVSSDFEFSVK+RCMI+ADEIFFQG+LLPLKDS
Sbjct: 1   MDPRISFSNDFVETKQGLKIENIYREAPVSSDFEFSVKNRCMISADEIFFQGKLLPLKDS 60

Query: 61  SR--NLLVKTTLRDELQVNEDDEDEDEDVSFPKLTK-TSASCWKERFGFRRSHFLPKKQH 120
           SR  NLLVKTTLRDELQVNE+D++EDE VSFPK TK +SASCWKE+FGFRRSHF+PKKQ 
Sbjct: 61  SRNNNLLVKTTLRDELQVNEEDDEEDE-VSFPKFTKVSSASCWKEKFGFRRSHFVPKKQS 120

Query: 121 RTEGVLKTVEEEEKTSVFLHEDLINIARKNG 149
           R EGVLKTVEEEEKTSVFLHEDLINIARKNG
Sbjct: 121 RNEGVLKTVEEEEKTSVFLHEDLINIARKNG 150

The following BLAST results are available for this feature:

BLAST of Lag0019632 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942817.1	3.3e-66	89.19	uncharacterized protein LOC111447733 [Cucurbita moschata]	[more]
KAG6600329.1	3.3e-66	89.19	hypothetical protein SDJN03_05562, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022983127.1	1.6e-65	90.54	uncharacterized protein LOC111481767 [Cucurbita maxima]	[more]
XP_023516088.1	1.1e-64	88.59	uncharacterized protein LOC111780054 [Cucurbita pepo subsp. pepo]	[more]
XP_038877999.1	1.4e-64	87.42	uncharacterized protein LOC120070205 [Benincasa hispida]	[more]

BLAST of Lag0019632 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31722:SF51	SUBFAMILY NOT NAMED	coord: 1..140
None	No IPR available	PANTHER	PTHR31722	OS06G0675200 PROTEIN	coord: 1..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0019632.1	Lag0019632.1	mRNA