Lag0019501 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTTCTCCGCCGCCCGGTTCTGCGGCGGCGTTTTGTTTCTCATTTCTCTGCAAATCTTCCACCGCCGTGGGGCCGTCGTCGGAGACAGTTCTTCGACGGGGCGGCTGAAGCAGGGGAATAGTAATAATGATGGGTGTGGGTTTTACGAAGGCAGCTGGGTTTACGACGTGTCGTACCCGCTTTACGACGTGTCGAATTGCCCCTTCGTCGGAGACGGATTTAACTGCCGGCAGAATGGCCGCCAGGACTCCGACTACCTCAAGTTCCGGTGGCAGCCCAGTCGCTGCGACCTCCCCAGGTACCCCTTTCTTCAATCAAGTACAATTATTCGTTTTTTGAATTTTTTTTCATTGGATTTTGTTTTGTTTGTTAACAACATGAGTATTTGAACCACCGAACTTTTGATTATTTGTACGGATATTGAATTGATATTAATGTTTTTAACATTTTTAAAAATTTACAATAAATTCAAATGTTAATATATAGGTTAAAAATCACTTTTAGTCTCTAAACTTTCATAAAAGTAACAATTTGGTTCCTTAACTTTGATTTGTAACGATTTAGTTCCAGTACTTTCAATTTTGTAACAATTTAG ATGGCCTTCTCCGCCGCCCGGTTCTGCGGCGGCGTTTTGTTTCTCATTTCTCTGCAAATCTTCCACCGCCGTGGGGCCGTCGTCGGAGACAGTTCTTCGACGGGGCGGCTGAAGCAGGGGAATAGTAATAATGATGGGTGTGGGTTTTACGAAGGCAGCTGGGTTTACGACGTGTCGTACCCGCTTTACGACGTGTCGAATTGCCCCTTCGTCGGAGACGGATTTAACTGCCGGCAGAATGGCCGCCAGGACTCCGACTACCTCAAGTTCCGGTGGCAGCCCAGTCGCTGCGACCTCCCCAGTTCCAGTACTTTCAATTTTGTAACAATTTAG ATGGCCTTCTCCGCCGCCCGGTTCTGCGGCGGCGTTTTGTTTCTCATTTCTCTGCAAATCTTCCACCGCCGTGGGGCCGTCGTCGGAGACAGTTCTTCGACGGGGCGGCTGAAGCAGGGGAATAGTAATAATGATGGGTGTGGGTTTTACGAAGGCAGCTGGGTTTACGACGTGTCGTACCCGCTTTACGACGTGTCGAATTGCCCCTTCGTCGGAGACGGATTTAACTGCCGGCAGAATGGCCGCCAGGACTCCGACTACCTCAAGTTCCGGTGGCAGCCCAGTCGCTGCGACCTCCCCAGTTCCAGTACTTTCAATTTTGTAACAATTTAG MAFSAARFCGGVLFLISLQIFHRRGAVVGDSSSTGRLKQGNSNNDGCGFYEGSWVYDVSYPLYDVSNCPFVGDGFNCRQNGRQDSDYLKFRWQPSRCDLPSSSTFNFVTI Homology
BLAST of Lag0019501 vs. NCBI nr
Match: XP_004137309.1 (protein trichome birefringence-like 42 [Cucumis sativus] >KGN53586.1 hypothetical protein Csa_015123 [Cucumis sativus]) HSP 1 Score: 153.3 bits (386), Expect = 1.2e-33 Identity = 69/100 (69.00%), Postives = 79/100 (79.00%), Query Frame = 0
BLAST of Lag0019501 vs. NCBI nr
Match: XP_008451728.1 (PREDICTED: protein trichome birefringence-like 42 [Cucumis melo] >TYK16262.1 protein trichome birefringence-like 42 [Cucumis melo var. makuwa]) HSP 1 Score: 142.1 bits (357), Expect = 2.8e-30 Identity = 66/100 (66.00%), Postives = 76/100 (76.00%), Query Frame = 0
BLAST of Lag0019501 vs. NCBI nr
Match: KAA0059051.1 (protein VTE6 [Cucumis melo var. makuwa]) HSP 1 Score: 141.4 bits (355), Expect = 4.8e-30 Identity = 66/100 (66.00%), Postives = 76/100 (76.00%), Query Frame = 0
BLAST of Lag0019501 vs. NCBI nr
Match: TXG66670.1 (hypothetical protein EZV62_007945 [Acer yangbiense]) HSP 1 Score: 102.4 bits (254), Expect = 2.5e-18 Identity = 43/80 (53.75%), Postives = 60/80 (75.00%), Query Frame = 0
BLAST of Lag0019501 vs. NCBI nr
Match: XP_019104304.1 (PREDICTED: protein trichome birefringence-like 42 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 101.7 bits (252), Expect = 4.2e-18 Identity = 38/55 (69.09%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of Lag0019501 vs. ExPASy Swiss-Prot
Match: Q6DR10 (Protein trichome birefringence-like 43 OS=Arabidopsis thaliana OX=3702 GN=TBL43 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.8e-19 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 0
BLAST of Lag0019501 vs. ExPASy Swiss-Prot
Match: Q9SIN2 (Protein trichome birefringence-like 39 OS=Arabidopsis thaliana OX=3702 GN=TBL39 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.4e-16 Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = 0
BLAST of Lag0019501 vs. ExPASy Swiss-Prot
Match: F4K5K4 (Protein trichome birefringence-like 5 OS=Arabidopsis thaliana OX=3702 GN=TBL5 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 9.1e-16 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 0
BLAST of Lag0019501 vs. ExPASy Swiss-Prot
Match: O22960 (Protein trichome birefringence-like 37 OS=Arabidopsis thaliana OX=3702 GN=TBL37 PE=2 SV=2) HSP 1 Score: 79.7 bits (195), Expect = 2.2e-14 Identity = 33/75 (44.00%), Postives = 42/75 (56.00%), Query Frame = 0
BLAST of Lag0019501 vs. ExPASy Swiss-Prot
Match: Q5BPJ0 (Protein trichome birefringence-like 11 OS=Arabidopsis thaliana OX=3702 GN=TBL11 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 6.5e-14 Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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