Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTCTCAGCAAAAGTTTGCATTCTTCTAGTTTTGTTCTTGTTCTCTTCTTCTTCCTCCTCAGCCTTCCCAGGAAAGAAGCAAAAACCCAAGCCTTGTAAAGAGCTAGTTCTTTACTTTCATGACATTATTTACAATGGAACGAATGCAGCCAATGCCACTTCGGCCATTGTTGCAGCCCCTGAAGGTTCAAACTTGACAATTTTGGCACCCCACAACCACTTTGGAAACATAGTCGTTTTCGACGATCCCCTTACCTTGGACAACAATCTCCACTCGCCTCCCGTGGGTCGAGCTCAAGGGCTTTACCTTTACGACACCAAAAATACCTTCACCGCATGGTTCGGCTTCACGTTTTCTCTCAACTACACGTCCTATGTTGGCACCATCAACTGCATCGGAGCTGACCCGGCCTTGGTGAAGACTAGAGACATCTCCGTCGTCGGTGGCACCGGAGACTTCTTCATGCACCGCGGTATTGCTACCATCATGACTGATGCCGTTGAAGATGATGTCTACTTTCGACTCCGATTTGATATCAAGTTCTACGAGTGCTGGTGA
mRNA sequence
ATGGCTTTCTCAGCAAAAGTTTGCATTCTTCTAGTTTTGTTCTTGTTCTCTTCTTCTTCCTCCTCAGCCTTCCCAGGAAAGAAGCAAAAACCCAAGCCTTGTAAAGAGCTAGTTCTTTACTTTCATGACATTATTTACAATGGAACGAATGCAGCCAATGCCACTTCGGCCATTGTTGCAGCCCCTGAAGGTTCAAACTTGACAATTTTGGCACCCCACAACCACTTTGGAAACATAGTCGTTTTCGACGATCCCCTTACCTTGGACAACAATCTCCACTCGCCTCCCGTGGGTCGAGCTCAAGGGCTTTACCTTTACGACACCAAAAATACCTTCACCGCATGGTTCGGCTTCACGTTTTCTCTCAACTACACGTCCTATGTTGGCACCATCAACTGCATCGGAGCTGACCCGGCCTTGGTGAAGACTAGAGACATCTCCGTCGTCGGTGGCACCGGAGACTTCTTCATGCACCGCGGTATTGCTACCATCATGACTGATGCCGTTGAAGATGATGTCTACTTTCGACTCCGATTTGATATCAAGTTCTACGAGTGCTGGTGA
Coding sequence (CDS)
ATGGCTTTCTCAGCAAAAGTTTGCATTCTTCTAGTTTTGTTCTTGTTCTCTTCTTCTTCCTCCTCAGCCTTCCCAGGAAAGAAGCAAAAACCCAAGCCTTGTAAAGAGCTAGTTCTTTACTTTCATGACATTATTTACAATGGAACGAATGCAGCCAATGCCACTTCGGCCATTGTTGCAGCCCCTGAAGGTTCAAACTTGACAATTTTGGCACCCCACAACCACTTTGGAAACATAGTCGTTTTCGACGATCCCCTTACCTTGGACAACAATCTCCACTCGCCTCCCGTGGGTCGAGCTCAAGGGCTTTACCTTTACGACACCAAAAATACCTTCACCGCATGGTTCGGCTTCACGTTTTCTCTCAACTACACGTCCTATGTTGGCACCATCAACTGCATCGGAGCTGACCCGGCCTTGGTGAAGACTAGAGACATCTCCGTCGTCGGTGGCACCGGAGACTTCTTCATGCACCGCGGTATTGCTACCATCATGACTGATGCCGTTGAAGATGATGTCTACTTTCGACTCCGATTTGATATCAAGTTCTACGAGTGCTGGTGA
Protein sequence
MAFSAKVCILLVLFLFSSSSSSAFPGKKQKPKPCKELVLYFHDIIYNGTNAANATSAIVAAPEGSNLTILAPHNHFGNIVVFDDPLTLDNNLHSPPVGRAQGLYLYDTKNTFTAWFGFTFSLNYTSYVGTINCIGADPALVKTRDISVVGGTGDFFMHRGIATIMTDAVEDDVYFRLRFDIKFYECW
Homology
BLAST of Lag0019274 vs. NCBI nr
Match:
KAG6577167.1 (Disease resistance response protein 206, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 323.2 bits (827), Expect = 1.5e-84
Identity = 159/189 (84.13%), Postives = 170/189 (89.95%), Query Frame = 0
Query: 1 MAFSAKVCILLV-LFLFSSSSSSAFP-GKKQKPKPCKELVLYFHDIIYNGTNAANATSAI 60
MA SAK CI+LV LFLFS SSSSAFP GKKQ+PKPCKELVLYFHDIIYNG+NA NATSAI
Sbjct: 1 MASSAKNCIILVALFLFSISSSSAFPMGKKQRPKPCKELVLYFHDIIYNGSNAGNATSAI 60
Query: 61 VAAPEGSNLTILAPHNHFGNIVVFDDPLTLDNNLHSPPVGRAQGLYLYDTKNTFTAWFGF 120
VAAP G+NLTILAP HFGNI VFDDP+TLDNNLHS PVGRAQGLY+YDTKNTFTAW GF
Sbjct: 61 VAAPHGANLTILAPQFHFGNIAVFDDPITLDNNLHSKPVGRAQGLYIYDTKNTFTAWLGF 120
Query: 121 TFSLNYTSYVGTINCIGADPALVKTRDISVVGGTGDFFMHRGIATIMTDAVEDDVYFRLR 180
+FSLNYT+Y GTIN IGADP LVK RDISVVGGTGDFFMHRG+ATI+TDA E +VYFRLR
Sbjct: 121 SFSLNYTAYKGTINFIGADPILVKARDISVVGGTGDFFMHRGVATIVTDAFEGEVYFRLR 180
Query: 181 FDIKFYECW 188
DIKFYECW
Sbjct: 181 VDIKFYECW 189
BLAST of Lag0019274 vs. NCBI nr
Match:
XP_022931436.1 (disease resistance response protein 206-like [Cucurbita moschata])
HSP 1 Score: 322.8 bits (826), Expect = 2.0e-84
Identity = 159/189 (84.13%), Postives = 169/189 (89.42%), Query Frame = 0
Query: 1 MAFSAKVCILLV-LFLFSSSSSSAFP-GKKQKPKPCKELVLYFHDIIYNGTNAANATSAI 60
MA SAK CI+LV LFLFS SSSSAFP GKKQ+PKPCKELVLYFHDIIYNG NA NATSAI
Sbjct: 1 MASSAKNCIILVALFLFSISSSSAFPMGKKQRPKPCKELVLYFHDIIYNGNNAGNATSAI 60
Query: 61 VAAPEGSNLTILAPHNHFGNIVVFDDPLTLDNNLHSPPVGRAQGLYLYDTKNTFTAWFGF 120
VAAP G+NLTILAP HFGNI VFDDP+TLDNNLHS PVGRAQGLY+YDTKNTFTAW GF
Sbjct: 61 VAAPHGANLTILAPQFHFGNIAVFDDPITLDNNLHSKPVGRAQGLYIYDTKNTFTAWLGF 120
Query: 121 TFSLNYTSYVGTINCIGADPALVKTRDISVVGGTGDFFMHRGIATIMTDAVEDDVYFRLR 180
+FSLNYT+Y GTIN IGADP LVK RDISVVGGTGDFFMHRG+ATI+TDA E +VYFRLR
Sbjct: 121 SFSLNYTAYKGTINFIGADPILVKARDISVVGGTGDFFMHRGVATIVTDAFEGEVYFRLR 180
Query: 181 FDIKFYECW 188
DIKFYECW
Sbjct: 181 VDIKFYECW 189
BLAST of Lag0019274 vs. NCBI nr
Match:
XP_022985425.1 (disease resistance response protein 206-like [Cucurbita maxima])
HSP 1 Score: 322.8 bits (826), Expect = 2.0e-84
Identity = 160/189 (84.66%), Postives = 168/189 (88.89%), Query Frame = 0
Query: 1 MAFSAKVC-ILLVLFLFSSSSSSAFP-GKKQKPKPCKELVLYFHDIIYNGTNAANATSAI 60
MA SAK C ILL LFLFS SSSSAFP GKKQKPKPCKELVLYFHDIIYNG NA NATSAI
Sbjct: 1 MASSAKNCIILLALFLFSISSSSAFPWGKKQKPKPCKELVLYFHDIIYNGKNAGNATSAI 60
Query: 61 VAAPEGSNLTILAPHNHFGNIVVFDDPLTLDNNLHSPPVGRAQGLYLYDTKNTFTAWFGF 120
VAAP G+NLTILAP HFGNI VFDDP+TLDNNLHS PVGRAQGLY+YDTKNTFTAW GF
Sbjct: 61 VAAPHGANLTILAPQFHFGNIAVFDDPITLDNNLHSKPVGRAQGLYIYDTKNTFTAWLGF 120
Query: 121 TFSLNYTSYVGTINCIGADPALVKTRDISVVGGTGDFFMHRGIATIMTDAVEDDVYFRLR 180
+FSLNYT+Y GTIN IGADP LVK RDISVVGGTGDFFMHRG+ATI+TDA E +VYFRLR
Sbjct: 121 SFSLNYTAYKGTINFIGADPILVKARDISVVGGTGDFFMHRGVATIVTDAFEGEVYFRLR 180
Query: 181 FDIKFYECW 188
DIKFYECW
Sbjct: 181 VDIKFYECW 189
BLAST of Lag0019274 vs. NCBI nr
Match:
XP_023553111.1 (disease resistance response protein 206-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 318.9 bits (816), Expect = 2.9e-83
Identity = 157/189 (83.07%), Postives = 168/189 (88.89%), Query Frame = 0
Query: 1 MAFSAKVCI-LLVLFLFSSSSSSAFP-GKKQKPKPCKELVLYFHDIIYNGTNAANATSAI 60
MA +A+ CI LL LFLFS SSSSAFP GKKQ+PKPCKELVLYFHDIIYNG NA NATSAI
Sbjct: 1 MASTARNCIMLLALFLFSISSSSAFPWGKKQRPKPCKELVLYFHDIIYNGKNARNATSAI 60
Query: 61 VAAPEGSNLTILAPHNHFGNIVVFDDPLTLDNNLHSPPVGRAQGLYLYDTKNTFTAWFGF 120
VAAP G+NLTILAP HFGNI VFDDP+TLDNNLHS PVGRAQGLY+YDTKNTFTAW GF
Sbjct: 61 VAAPHGANLTILAPQFHFGNIAVFDDPITLDNNLHSKPVGRAQGLYIYDTKNTFTAWLGF 120
Query: 121 TFSLNYTSYVGTINCIGADPALVKTRDISVVGGTGDFFMHRGIATIMTDAVEDDVYFRLR 180
+FSLNYT+Y GTIN IGADP LVK RDISVVGGTGDFFMHRG+ATI+TDA E +VYFRLR
Sbjct: 121 SFSLNYTAYKGTINFIGADPILVKARDISVVGGTGDFFMHRGVATIVTDAFEGEVYFRLR 180
Query: 181 FDIKFYECW 188
DIKFYECW
Sbjct: 181 VDIKFYECW 189
BLAST of Lag0019274 vs. NCBI nr
Match:
XP_038906438.1 (disease resistance response protein 206-like [Benincasa hispida])
HSP 1 Score: 318.5 bits (815), Expect = 3.7e-83
Identity = 156/189 (82.54%), Postives = 169/189 (89.42%), Query Frame = 0
Query: 1 MAFSAKVCILLV-LFLFSSSSSSAFP-GKKQKPKPCKELVLYFHDIIYNGTNAANATSAI 60
MAFS + CI+L+ L LFS+SSSSA P GKKQK KPCKELVLYFHDIIYNG NA NATSAI
Sbjct: 1 MAFSTRNCIILIALLLFSTSSSSASPWGKKQKHKPCKELVLYFHDIIYNGKNAGNATSAI 60
Query: 61 VAAPEGSNLTILAPHNHFGNIVVFDDPLTLDNNLHSPPVGRAQGLYLYDTKNTFTAWFGF 120
VAAPEG+NLTILAP HFGNIVVFDDP+TLDNNLHS PVGRAQGLY+YDTKNTFT+W F
Sbjct: 61 VAAPEGANLTILAPQFHFGNIVVFDDPITLDNNLHSNPVGRAQGLYIYDTKNTFTSWLAF 120
Query: 121 TFSLNYTSYVGTINCIGADPALVKTRDISVVGGTGDFFMHRGIATIMTDAVEDDVYFRLR 180
+FSLNYT+Y GTIN +GADP LVKTRDISVVGGTGDFFMHRG+ATIMTDA E +VYFRLR
Sbjct: 121 SFSLNYTAYKGTINFVGADPILVKTRDISVVGGTGDFFMHRGVATIMTDAFEGEVYFRLR 180
Query: 181 FDIKFYECW 188
DIKFYECW
Sbjct: 181 VDIKFYECW 189
BLAST of Lag0019274 vs. ExPASy Swiss-Prot
Match:
P13240 (Disease resistance response protein 206 OS=Pisum sativum OX=3888 GN=PI206 PE=1 SV=2)
HSP 1 Score: 251.9 bits (642), Expect = 5.6e-66
Identity = 123/180 (68.33%), Postives = 141/180 (78.33%), Query Frame = 0
Query: 10 LLVLFLFSS--SSSSAFPGKKQKPKPCKELVLYFHDIIYNGTNAANATSAIVAAPEGSNL 69
LLVLF+F + SSA P K++ KPCK LV YFHDI+YNG NAANATSAIVAAPEG +L
Sbjct: 5 LLVLFVFVMLFALSSAIPNKRKPYKPCKNLVFYFHDILYNGKNAANATSAIVAAPEGVSL 64
Query: 70 TILAPHNHFGNIVVFDDPLTLDNNLHSPPVGRAQGLYLYDTKNTFTAWFGFTFSLNYTSY 129
T LAP +HFGNI+VFDDP+TL ++L S VGRAQG Y+YDTKNT+T+W FTF LN T +
Sbjct: 65 TKLAPQSHFGNIIVFDDPITLSHSLSSKQVGRAQGFYIYDTKNTYTSWLSFTFVLNSTHH 124
Query: 130 VGTINCIGADPALVKTRDISVVGGTGDFFMHRGIATIMTDAVEDDVYFRLRFDIKFYECW 188
GTI GADP + KTRDISV GGTGDFFMHRGIATI TDA E + YFRL IKF+ECW
Sbjct: 125 QGTITFAGADPIVAKTRDISVTGGTGDFFMHRGIATITTDAFEGEAYFRLGVYIKFFECW 184
BLAST of Lag0019274 vs. ExPASy Swiss-Prot
Match:
Q1ZZU9 (Dirigent protein OS=Sinopodophyllum hexandrum OX=93608 GN=DIR PE=2 SV=1)
HSP 1 Score: 249.2 bits (635), Expect = 3.6e-65
Identity = 118/188 (62.77%), Postives = 148/188 (78.72%), Query Frame = 0
Query: 2 AFSAKVCILLVLFLFSSSSSSAFPGKKQKPK--PCKELVLYFHDIIYNGTNAANATSAIV 61
AFS + L FL + S+SSA P +++ + PCK+LVLYFHD++YNG N ANAT++IV
Sbjct: 6 AFSFIFLLFLCFFLANLSASSAHPPRQKLKQRIPCKQLVLYFHDVVYNGHNKANATASIV 65
Query: 62 AAPEGSNLTILAPHNHFGNIVVFDDPLTLDNNLHSPPVGRAQGLYLYDTKNTFTAWFGFT 121
AP+G++L LA NHFGN+VVFDDP+TLDNN HSPPVGRAQGLY+YD K+TF +W F+
Sbjct: 66 GAPQGADLVKLAGENHFGNVVVFDDPITLDNNFHSPPVGRAQGLYVYDKKDTFHSWLSFS 125
Query: 122 FSLNYTSYVGTINCIGADPALVKTRDISVVGGTGDFFMHRGIATIMTDAVEDDVYFRLRF 181
F+LN T + GT+ +GADP L+K RDI+VVGGTGDFFM RGIATI TD+ E +VYFRL+
Sbjct: 126 FTLNTTMHQGTLIFMGADPILIKNRDITVVGGTGDFFMARGIATIATDSYEGEVYFRLKV 185
Query: 182 DIKFYECW 188
DIK YECW
Sbjct: 186 DIKLYECW 193
BLAST of Lag0019274 vs. ExPASy Swiss-Prot
Match:
Q9SH66 (Dirigent protein 5 OS=Arabidopsis thaliana OX=3702 GN=DIR5 PE=2 SV=1)
HSP 1 Score: 183.7 bits (465), Expect = 1.9e-45
Identity = 88/178 (49.44%), Postives = 113/178 (63.48%), Query Frame = 0
Query: 10 LLVLFLFSSSSSSAFPGKKQKPKPCKELVLYFHDIIYNGTNAANATSAIVAAPEGSNLTI 69
L V + + + SA K +PKPCK VLY+HDI++ + NATSA V P G
Sbjct: 11 LFVFLVLTKTVISARKPSKSQPKPCKNFVLYYHDIMFGVDDVQNATSAAVTNPPGLG--- 70
Query: 70 LAPHNHFGNIVVFDDPLTLDNNLHSPPVGRAQGLYLYDTKNTFTAWFGFTFSLNYTSYVG 129
+ FG +V+FDDP+T+D N S PV RAQG Y YD KN + AWF +T N T + G
Sbjct: 71 ---NFKFGKLVIFDDPMTIDKNFQSEPVARAQGFYFYDMKNDYNAWFAYTLVFNSTQHKG 130
Query: 130 TINCIGADPALVKTRDISVVGGTGDFFMHRGIATIMTDAVEDDVYFRLRFDIKFYECW 188
T+N +GAD +V++RD+SVVGGTGDFFM RGI T TD E YFR++ DIK YEC+
Sbjct: 131 TLNIMGADLMMVQSRDLSVVGGTGDFFMSRGIVTFETDTFEGAKYFRVKMDIKLYECY 182
BLAST of Lag0019274 vs. ExPASy Swiss-Prot
Match:
Q9SUQ8 (Dirigent protein 6 OS=Arabidopsis thaliana OX=3702 GN=DIR6 PE=1 SV=1)
HSP 1 Score: 178.3 bits (451), Expect = 7.9e-44
Identity = 90/185 (48.65%), Postives = 114/185 (61.62%), Query Frame = 0
Query: 3 FSAKVCILLVLFLFSSSSSSAFPGKKQKPKPCKELVLYFHDIIYNGTNAANATSAIVAAP 62
F A L++ LFS + S F + KPCK YFHDI+Y+G N ANATSA + +P
Sbjct: 10 FKALFSFFLLVLLFSDTVLS-FRKTIDQKKPCKHFSFYFHDILYDGDNVANATSAAIVSP 69
Query: 63 EGSNLTILAPHNHFGNIVVFDDPLTLDNNLHSPPVGRAQGLYLYDTKNTFTAWFGFTFSL 122
G + FG V+FD P+T+D N S PV RAQG Y YD K F +WF +T
Sbjct: 70 PGLG------NFKFGKFVIFDGPITMDKNYLSKPVARAQGFYFYDMKMDFNSWFSYTLVF 129
Query: 123 NYTSYVGTINCIGADPALVKTRDISVVGGTGDFFMHRGIATIMTDAVEDDVYFRLRFDIK 182
N T + GT+N +GAD + TRD+SVVGGTGDFFM RGIAT +TD + YFR++ DIK
Sbjct: 130 NSTEHKGTLNIMGADLMMEPTRDLSVVGGTGDFFMARGIATFVTDLFQGAKYFRVKMDIK 187
Query: 183 FYECW 188
YEC+
Sbjct: 190 LYECY 187
BLAST of Lag0019274 vs. ExPASy Swiss-Prot
Match:
Q9T019 (Dirigent protein 14 OS=Arabidopsis thaliana OX=3702 GN=DIR14 PE=2 SV=1)
HSP 1 Score: 159.8 bits (403), Expect = 2.9e-38
Identity = 80/179 (44.69%), Postives = 104/179 (58.10%), Query Frame = 0
Query: 9 ILLVLFLFSSSSSSAFPGKKQKPKPCKELVLYFHDIIYNGTNAANATSAIVAAPEGSNLT 68
I L + L S + S+F KPCK VL+ HDI Y+G NAANATSA + P G
Sbjct: 11 ICLSVLLCQSYTVSSFQKSLDLAKPCKRFVLHLHDIAYDGDNAANATSAAIVNPLGLG-- 70
Query: 69 ILAPHNHFGNIVVFDDPLTLDNNLHSPPVGRAQGLYLYDTKNTFTAWFGFTFSLNYTSYV 128
FG V+ DDP+T+D N S PV R QG + Y K T+ AW +T N T +
Sbjct: 71 ----DFSFGKFVIMDDPVTMDQNYLSKPVARVQGFFCYHGKATYDAWIAWTVVFNSTQHK 130
Query: 129 GTINCIGADPALVKTRDISVVGGTGDFFMHRGIATIMTDAVEDDVYFRLRFDIKFYECW 188
G +G +P + TRD+ +VGGTGDF M RGIAT+ TD ++ YFR++ DIK YEC+
Sbjct: 131 GAFTIMGENPFMEPTRDLPIVGGTGDFIMTRGIATLTTDHIDGSKYFRVKLDIKLYECY 183
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6577167.1 | 1.5e-84 | 84.13 | Disease resistance response protein 206, partial [Cucurbita argyrosperma subsp. ... | [more] |
XP_022931436.1 | 2.0e-84 | 84.13 | disease resistance response protein 206-like [Cucurbita moschata] | [more] |
XP_022985425.1 | 2.0e-84 | 84.66 | disease resistance response protein 206-like [Cucurbita maxima] | [more] |
XP_023553111.1 | 2.9e-83 | 83.07 | disease resistance response protein 206-like [Cucurbita pepo subsp. pepo] | [more] |
XP_038906438.1 | 3.7e-83 | 82.54 | disease resistance response protein 206-like [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
P13240 | 5.6e-66 | 68.33 | Disease resistance response protein 206 OS=Pisum sativum OX=3888 GN=PI206 PE=1 S... | [more] |
Q1ZZU9 | 3.6e-65 | 62.77 | Dirigent protein OS=Sinopodophyllum hexandrum OX=93608 GN=DIR PE=2 SV=1 | [more] |
Q9SH66 | 1.9e-45 | 49.44 | Dirigent protein 5 OS=Arabidopsis thaliana OX=3702 GN=DIR5 PE=2 SV=1 | [more] |
Q9SUQ8 | 7.9e-44 | 48.65 | Dirigent protein 6 OS=Arabidopsis thaliana OX=3702 GN=DIR6 PE=1 SV=1 | [more] |
Q9T019 | 2.9e-38 | 44.69 | Dirigent protein 14 OS=Arabidopsis thaliana OX=3702 GN=DIR14 PE=2 SV=1 | [more] |