Lag0019201 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCGTGGAATTCGAATTCTTGCGAGGGAGCAGAGAAGGACTGTCTCAATCATCACCTTCGGAAGAAGATGTATAAGCAACAGGGCGGTTATGAGCTTTGGGGATGGTAGCCATGGCGCAATCGGCTTGCCCACTTCGCTCACGGGCATTGGTGGCGCCGCTTACGAGCCCACCGCCGTCCCGGGGCTTCCTCCCGATGTTACCAGTGTAGCCGCAGGGCACTATCACTCTCTCGCTGTCGATTCGCAAGGCCGTCTCTGGGCTTGGGGCAGAGACCATGAAGCGCAGCTTGGCCGGGGCTTTGATTCCCCTAGGTAG ATGATTCGTGGAATTCGAATTCTTGCGAGGGAGCAGAGAAGGACTGTCTCAATCATCACCTTCGGAAGAAGATGTATAAGCAACAGGGCGGTTATGAGCTTTGGGGATGGTAGCCATGGCGCAATCGGCTTGCCCACTTCGCTCACGGGCATTGGTGGCGCCGCTTACGAGCCCACCGCCGTCCCGGGGCTTCCTCCCGATGTTACCAGTGTAGCCGCAGGGCACTATCACTCTCTCGCTGTCGATTCGCAAGGCCGTCTCTGGGCTTGGGGCAGAGACCATGAAGCGCAGCTTGGCCGGGGCTTTGATTCCCCTAGGTAG ATGATTCGTGGAATTCGAATTCTTGCGAGGGAGCAGAGAAGGACTGTCTCAATCATCACCTTCGGAAGAAGATGTATAAGCAACAGGGCGGTTATGAGCTTTGGGGATGGTAGCCATGGCGCAATCGGCTTGCCCACTTCGCTCACGGGCATTGGTGGCGCCGCTTACGAGCCCACCGCCGTCCCGGGGCTTCCTCCCGATGTTACCAGTGTAGCCGCAGGGCACTATCACTCTCTCGCTGTCGATTCGCAAGGCCGTCTCTGGGCTTGGGGCAGAGACCATGAAGCGCAGCTTGGCCGGGGCTTTGATTCCCCTAGGTAG MIRGIRILAREQRRTVSIITFGRRCISNRAVMSFGDGSHGAIGLPTSLTGIGGAAYEPTAVPGLPPDVTSVAAGHYHSLAVDSQGRLWAWGRDHEAQLGRGFDSPR Homology
BLAST of Lag0019201 vs. NCBI nr
Match: XP_022984599.1 (ultraviolet-B receptor UVR8 [Cucurbita maxima]) HSP 1 Score: 193.4 bits (490), Expect = 1.0e-45 Identity = 95/106 (89.62%), Postives = 99/106 (93.40%), Query Frame = 0
BLAST of Lag0019201 vs. NCBI nr
Match: XP_038905737.1 (ultraviolet-B receptor UVR8 [Benincasa hispida]) HSP 1 Score: 193.4 bits (490), Expect = 1.0e-45 Identity = 95/106 (89.62%), Postives = 99/106 (93.40%), Query Frame = 0
BLAST of Lag0019201 vs. NCBI nr
Match: XP_022929402.1 (ultraviolet-B receptor UVR8 [Cucurbita moschata]) HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44 Identity = 94/106 (88.68%), Postives = 98/106 (92.45%), Query Frame = 0
BLAST of Lag0019201 vs. NCBI nr
Match: KAG6577213.1 (Ultraviolet-B receptor UVR8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44 Identity = 94/106 (88.68%), Postives = 98/106 (92.45%), Query Frame = 0
BLAST of Lag0019201 vs. NCBI nr
Match: KAG7015304.1 (Ultraviolet-B receptor UVR8 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 188.3 bits (477), Expect = 3.3e-44 Identity = 93/106 (87.74%), Postives = 98/106 (92.45%), Query Frame = 0
BLAST of Lag0019201 vs. ExPASy Swiss-Prot
Match: F2Z461 (E3 ISG15--protein ligase Herc6 OS=Mus musculus OX=10090 GN=Herc6 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 4.1e-05 Identity = 27/75 (36.00%), Postives = 42/75 (56.00%), Query Frame = 0
BLAST of Lag0019201 vs. ExPASy Swiss-Prot
Match: D3ZGQ5 (Serine/threonine-protein kinase Nek8 OS=Rattus norvegicus OX=10116 GN=Nek8 PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.6e-04 Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 0
BLAST of Lag0019201 vs. ExPASy Swiss-Prot
Match: Q91ZR4 (Serine/threonine-protein kinase Nek8 OS=Mus musculus OX=10090 GN=Nek8 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 3.5e-04 Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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