Lag0019190 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0019190
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	GATA transcription factor 19-like
Location	chr5: 39697946 .. 39699020 (+)
RNA-Seq Expression	Lag0019190
Synteny	Lag0019190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCACCATTGCGGCGGCGGCGGAGGCGGCGGCGGCGCCTCTTCCTTTTCTGTTTTCTTGTCTGTCCCCAACCACGGCGCCGCCCATGAGATGATGGATATCTATTCTACTAATTACCCCTCCTCCTCCTCCTCCTCTCCTTCTTCCGTCGATTGTACTCTCTCTCTCGGCACTCCCTCCACGCGATCGTCGGAATTGGATTCCGACAAACGCGCCGCCGCACGCCACCACCGGCGCTCTGCCGGCTCTTACGTCTCTAACTTCTGTTGGGATTTGTTGCACCCCAAACACAAGAGTACTGCCCGTTCCGGTGCTGGTAATAGTGCCGCCGCGCCCCCCGGCGGTGATCCGCTTCTTGCTCGGCGTTGCGCTAACTGCGACACCACCTCCACTCCGCTTTGGAGAAATGGGCCGAGAGGGCCTAAGGTATATCACGTGATCTGAAATACCGAAAATGATTTTTAATTATTTTTTTTTTCTATTATTTATTCTTTTACCTTTTCATTTTTCAATTCGAGTTTATAATTTAAAATTTTGAATTACGACAAAGTTCAACAACTGCTTTAAAGAATAATTCGATTAAATGAGTCCGAATCTCACTATTTTTTAATGTAATTTATAGAATTTGAAATGATTTATTCGATTGAAAAATGCATAATCATTCAAAATTTTGGGATTTCTAATTGGTTGGCATTTGTGAACTTGACTGCAGTCTTTATGCAATGCGTGTGGGATTCGATTTAAGAAGGAAGAGCGGCGGGCGGCGGCGACGGTGAACACCACGGCGGTCGGAGCGGCGGCGGAATCAAATCACCACCACCATTACCAACAACAACAACACCACATGTTCGGCGGGAACTATACGAATTCAAGTACGTGGGTCCCACAACACTCGCCGGTGACGACCCAGAAACTTCCATGCCTGTCGCCGGCCGCCATGAACAACGAATCGATGTTCATCGGAAACGACGACGTTCGAAGAACAGAACCCGAAAATGGAATTTCTTTCCTCTCTTGGCGCCTTAACGTTACCGATCACCGGCCCAGCCTCGTCCCTGACTTCACAAGATGA

mRNA sequence

ATGATGCACCATTGCGGCGGCGGCGGAGGCGGCGGCGGCGCCTCTTCCTTTTCTGTTTTCTTGTCTGTCCCCAACCACGGCGCCGCCCATGAGATGATGGATATCTATTCTACTAATTACCCCTCCTCCTCCTCCTCCTCTCCTTCTTCCGTCGATTGTACTCTCTCTCTCGGCACTCCCTCCACGCGATCGTCGGAATTGGATTCCGACAAACGCGCCGCCGCACGCCACCACCGGCGCTCTGCCGGCTCTTACGTCTCTAACTTCTGTTGGGATTTGTTGCACCCCAAACACAAGAGTACTGCCCGTTCCGGTGCTGGTAATAGTGCCGCCGCGCCCCCCGGCGGTGATCCGCTTCTTGCTCGGCGTTGCGCTAACTGCGACACCACCTCCACTCCGCTTTGGAGAAATGGGCCGAGAGGGCCTAAGTCTTTATGCAATGCGTGTGGGATTCGATTTAAGAAGGAAGAGCGGCGGGCGGCGGCGACGGTGAACACCACGGCGGTCGGAGCGGCGGCGGAATCAAATCACCACCACCATTACCAACAACAACAACACCACATGTTCGGCGGGAACTATACGAATTCAAGTACGTGGGTCCCACAACACTCGCCGGTGACGACCCAGAAACTTCCATGCCTGTCGCCGGCCGCCATGAACAACGAATCGATGTTCATCGGAAACGACGACGTTCGAAGAACAGAACCCGAAAATGGAATTTCTTTCCTCTCTTGGCGCCTTAACGTTACCGATCACCGGCCCAGCCTCGTCCCTGACTTCACAAGATGA

Coding sequence (CDS)

ATGATGCACCATTGCGGCGGCGGCGGAGGCGGCGGCGGCGCCTCTTCCTTTTCTGTTTTCTTGTCTGTCCCCAACCACGGCGCCGCCCATGAGATGATGGATATCTATTCTACTAATTACCCCTCCTCCTCCTCCTCCTCTCCTTCTTCCGTCGATTGTACTCTCTCTCTCGGCACTCCCTCCACGCGATCGTCGGAATTGGATTCCGACAAACGCGCCGCCGCACGCCACCACCGGCGCTCTGCCGGCTCTTACGTCTCTAACTTCTGTTGGGATTTGTTGCACCCCAAACACAAGAGTACTGCCCGTTCCGGTGCTGGTAATAGTGCCGCCGCGCCCCCCGGCGGTGATCCGCTTCTTGCTCGGCGTTGCGCTAACTGCGACACCACCTCCACTCCGCTTTGGAGAAATGGGCCGAGAGGGCCTAAGTCTTTATGCAATGCGTGTGGGATTCGATTTAAGAAGGAAGAGCGGCGGGCGGCGGCGACGGTGAACACCACGGCGGTCGGAGCGGCGGCGGAATCAAATCACCACCACCATTACCAACAACAACAACACCACATGTTCGGCGGGAACTATACGAATTCAAGTACGTGGGTCCCACAACACTCGCCGGTGACGACCCAGAAACTTCCATGCCTGTCGCCGGCCGCCATGAACAACGAATCGATGTTCATCGGAAACGACGACGTTCGAAGAACAGAACCCGAAAATGGAATTTCTTTCCTCTCTTGGCGCCTTAACGTTACCGATCACCGGCCCAGCCTCGTCCCTGACTTCACAAGATGA

Protein sequence

MMHHCGGGGGGGGASSFSVFLSVPNHGAAHEMMDIYSTNYPSSSSSSPSSVDCTLSLGTPSTRSSELDSDKRAAARHHRRSAGSYVSNFCWDLLHPKHKSTARSGAGNSAAAPPGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNTTAVGAAAESNHHHHYQQQQHHMFGGNYTNSSTWVPQHSPVTTQKLPCLSPAAMNNESMFIGNDDVRRTEPENGISFLSWRLNVTDHRPSLVPDFTR

Homology

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BLAST of Lag0019190 vs. NCBI nr
Match: KAG6600583.1 (GATA transcription factor 18, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031223.1 GATA transcription factor 18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 438.0 bits (1125), Expect = 5.9e-119
Identity = 227/266 (85.34%), Postives = 233/266 (87.59%), Query Frame = 0


Query: 1   MMHHCGGGGGGGGASSFSVFLSVPNH-GAAHEMMDIYSTNY--PSSSSSSPSSVDCTLSL 60
           MMHHC G G GG ASSFSVFLSVPNH GAAH+MMDIYS NY   SSSSSSPSSVDCTLSL
Sbjct: 1   MMHHC-GAGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSELDSDKRAAARHHRRSAGSYVSNFCWDLLHPKHKSTARSGAGNSAAAPPGGD 120
           GTPSTRSSE DSDKRAA RHHRRSAGSYVSNFCWDLLHPKHKS  RS A N+AA P GGD
Sbjct: 61  GTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD 120

Query: 121 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNTTAVGAAAESNH 180
           PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVN TA   AAESN+
Sbjct: 121 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN 180

Query: 181 HHHYQQQQHHMFGGNYTNS-STWVPQHSPVTTQKLPCLSPAAMNNESMFIGNDDVRRTEP 240
           HHH   Q H MF GNYTNS +TWVP HSPV TQKLPCLS AA+NNESMFIGNDDVRRTE 
Sbjct: 181 HHHL-HQHHQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQ 240

Query: 241 ENGISFLSWRLNVTDHRPSLVPDFTR 263
           ENGIS+LSWRLNVTDHRPSLV DFTR
Sbjct: 241 ENGISYLSWRLNVTDHRPSLVHDFTR 264

[Close]

BLAST of Lag0019190 vs. NCBI nr
Match: XP_022942846.1 (GATA transcription factor 19-like [Cucurbita moschata])

HSP 1 Score: 438.0 bits (1125), Expect = 5.9e-119
Identity = 227/267 (85.02%), Postives = 233/267 (87.27%), Query Frame = 0


Query: 1   MMHHCGGGGGGGGASSFSVFLSVPNH-GAAHEMMDIYSTNY---PSSSSSSPSSVDCTLS 60
           MMHHC GGG GG ASSFSVFLSVPNH GAAH+MMDIYS NY    SSSSSSPSSVDCTLS
Sbjct: 1   MMHHC-GGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLS 60

Query: 61  LGTPSTRSSELDSDKRAAARHHRRSAGSYVSNFCWDLLHPKHKSTARSGAGNSAAAPPGG 120
           LGTPSTRSSE DSDKRAA RHHRRSAGSYVSNFCWDLLHPKHKS  RS A N+AA P GG
Sbjct: 61  LGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGG 120

Query: 121 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNTTAVGAAAESN 180
           DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVN TA   AAESN
Sbjct: 121 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESN 180

Query: 181 HHHHYQQQQHHMFGGNYTNS-STWVPQHSPVTTQKLPCLSPAAMNNESMFIGNDDVRRTE 240
           +HHH   Q H MF GNYTNS + WVP HSPV TQKLPCLS AA+NNESMFIGNDDVRRTE
Sbjct: 181 NHHHL-HQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTE 240

Query: 241 PENGISFLSWRLNVTDHRPSLVPDFTR 263
            ENGIS+LSWRLNVTDHRPSLV DFTR
Sbjct: 241 QENGISYLSWRLNVTDHRPSLVHDFTR 265

[Close]

BLAST of Lag0019190 vs. NCBI nr
Match: XP_023533953.1 (GATA transcription factor 19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.6 bits (1119), Expect = 2.9e-118
Identity = 226/265 (85.28%), Postives = 232/265 (87.55%), Query Frame = 0


Query: 1   MMHHCGGGGGGGGASSFSVFLSVPNH-GAAHEMMDIYSTNY-PSSSSSSPSSVDCTLSLG 60
           MMHHC  GG GG ASSFSVFLSVPNH GAAH+MMDIYS NY  SSSSSSPSSVDCTLSLG
Sbjct: 1   MMHHC--GGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSPSSVDCTLSLG 60

Query: 61  TPSTRSSELDSDKRAAARHHRRSAGSYVSNFCWDLLHPKHKSTARSGAGNSAAAPPGGDP 120
           TPSTRSSE DSDKRAA RHHRRSAGSYVSNFCWDLLHPKHKS  RS A N+AA P  GDP
Sbjct: 61  TPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSSGDP 120

Query: 121 LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNTTAVGAAAESNHH 180
           LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVN TA   AAESN+H
Sbjct: 121 LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATTMAAESNNH 180

Query: 181 HHYQQQQHHMFGGNYTNS-STWVPQHSPVTTQKLPCLSPAAMNNESMFIGNDDVRRTEPE 240
           HH   Q H MF GNYTNS +TWVP HSPV TQKLPCLS AA+NNESMFIGNDDVRRTE E
Sbjct: 181 HHL-HQHHQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQE 240

Query: 241 NGISFLSWRLNVTDHRPSLVPDFTR 263
           NGIS+LSWRLNVTDHRPSLV DFTR
Sbjct: 241 NGISYLSWRLNVTDHRPSLVHDFTR 262

[Close]

BLAST of Lag0019190 vs. NCBI nr
Match: XP_022982306.1 (GATA transcription factor 19-like [Cucurbita maxima])

HSP 1 Score: 430.6 bits (1106), Expect = 9.4e-117
Identity = 226/268 (84.33%), Postives = 232/268 (86.57%), Query Frame = 0


Query: 1   MMHHCGGGGGGGGASSFSVFLSVPNH-GAAHEMMDIYSTNY---PSSSSSSPSSVDCTLS 60
           MMHHC  GG GG ASSFSVFLSVPNH GAAH+MMDIYS NY    SSSSSSPSSVDCTLS
Sbjct: 1   MMHHC--GGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLS 60

Query: 61  LGTPSTRSSELDSDKRAAARHHRRSAGSYVSNFCWDLLHPKHKSTARSGAGNSAAAPPGG 120
           LGTPSTRSSE DSDKRAA RHHR SAGSYVSNFCWDLLHPKHKS  RS A N+AA P GG
Sbjct: 61  LGTPSTRSSEFDSDKRAAPRHHRHSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGG 120

Query: 121 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNTTAVGAAAESN 180
           DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVN TA   AAESN
Sbjct: 121 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESN 180

Query: 181 HHHHYQQQQHHMFGGNYTNSS-TWVPQHSPVTTQKLPCLS-PAAMNNESMFIGNDDVRRT 240
           +HHH   Q H MF GNYTNSS TWVP HSPV TQKLPCLS  AA++NESMFIGNDDVRRT
Sbjct: 181 NHHH-PHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAISNESMFIGNDDVRRT 240

Query: 241 EPENGISFLSWRLNVTDHRPSLVPDFTR 263
           E ENGIS+LSWRLNVTDHRPSLV DFTR
Sbjct: 241 EQENGISYLSWRLNVTDHRPSLVHDFTR 265

[Close]

BLAST of Lag0019190 vs. NCBI nr
Match: XP_038875549.1 (GATA transcription factor 18-like [Benincasa hispida])

HSP 1 Score: 352.4 bits (903), Expect = 3.3e-93
Identity = 206/273 (75.46%), Postives = 216/273 (79.12%), Query Frame = 0


Query: 1   MMHHCGGGGGGGGASSFSVFLSVPNHGAAHEMMDIY--STNYPSSSSSSPSSVDCTLSLG 60
           MMHH   GGGGGGASSFSVFLSVPNHGAA    D+Y  STNY +SSSSSPSSVDCTLSLG
Sbjct: 1   MMHHY--GGGGGGASSFSVFLSVPNHGAA----DMYSSSTNY-ASSSSSPSSVDCTLSLG 60

Query: 61  TPSTRSSELDSDKRAAAR-HHRRSAGSYVSNFCWDLLHPKHKSTARSGA---GNSAAAPP 120
           TPSTRSSE D+DKRAAAR HHRRSAGSYVSNFCWDLLHPKHK++ R+ A     +AA   
Sbjct: 61  TPSTRSSEFDADKRAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRAAAPPNNLTAAVTS 120

Query: 121 GGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR-AAATVNTTAVGAAA 180
           G DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR AAATVN+T    AA
Sbjct: 121 GADPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNST----AA 180

Query: 181 ESNHHHHYQQQQHH--MFGGNYTNSSTWVPQHSPVTTQKLPCLSPAAMNNESMFIGNDDV 240
           ESNHHHH     HH  MF GNYTNSSTWVPQ SP  +QK PCLS A        IGND  
Sbjct: 181 ESNHHHHL---HHHPIMFNGNYTNSSTWVPQQSPTMSQKHPCLSAA--------IGND-- 240

Query: 241 RRTEPENGISFLSWRLNV--TDHRPSLVPDFTR 263
              EPENGISFLSWRLNV  TDHRP+LV DFTR
Sbjct: 241 ---EPENGISFLSWRLNVANTDHRPTLVHDFTR 246

[Close]

BLAST of Lag0019190 vs. ExPASy Swiss-Prot
Match: Q8LC79 (GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2)

HSP 1 Score: 185.7 bits (470), Expect = 6.9e-46
Identity = 130/295 (44.07%), Postives = 149/295 (50.51%), Query Frame = 0


Query: 1   MMHH-----CGGGGGGGGASSFSVFLSVPNHGAAHEMMDIYSTNYPSSSSSSPSSVDCTL 60
           M HH     C        A S+S+  S+ N G   +  + Y          S S VDCTL
Sbjct: 20  MFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFEQNGEDY--------HHSSSLVDCTL 79

Query: 61  SLGTPSTRSSELDSDKRAAARHHRRSAGSYVSNFCWDLLHPKHK---------------- 120
           SLGTPSTR  E D  +R   R     A S +SNF WDL+H K+                 
Sbjct: 80  SLGTPSTRLCEEDEKRR---RSTSSGASSCISNF-WDLIHTKNNNSKTAPYNNVPSFSAN 139

Query: 121 --STARSGAGNSAAAPPGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEE 180
             S   SG G       GGD LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEE
Sbjct: 140 KPSRGCSGGGGGGGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEE 199

Query: 181 RRAAATVNTTAVGAAA----ESNHHHHYQQQQHHMFGGNYTNSSTWVPQHSPVTTQKLPC 240
           RR  A    T VGAA     +  HH+      H     N  N + W   HS   TQ++PC
Sbjct: 200 RRTTAATGNTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHHS---TQRVPC 259

Query: 241 LSPAAMNNESMFIGN------DDVRRTEPENGISFLSWRLNVTDHRPSLVPDFTR 263
             PA   NE  F+ +      ++V       G+ FLSWRLNV D R SLV DFTR
Sbjct: 260 NYPA---NEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVAD-RASLVHDFTR 295

[Close]

BLAST of Lag0019190 vs. ExPASy Swiss-Prot
Match: Q6QPM2 (GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 4.1e-38
Identity = 113/227 (49.78%), Postives = 131/227 (57.71%), Query Frame = 0


Query: 39  NYPSSSSSSPSSVDCTLSLGTPSTRSSELDSDKRAAARHHRRSAGSYVSNFCWDLLHPKH 98
           N  S  SS  +SVDCTLSLGTPSTR    D D+R  + H   + G       WD L+   
Sbjct: 11  NDVSHHSSPYASVDCTLSLGTPSTRLCNED-DERRFSSHTSDTIG-------WDFLNGSK 70

Query: 99  KSTARSGAGNSAAAPPGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 158
           K     G G       GG  LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER
Sbjct: 71  K-----GGGG------GGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 130

Query: 159 RAAATVNTTAVG---AAAESNHHHHYQQQQHHMFGGNYTNSSTWVPQHSPVTTQKLPCLS 218
           RA+   N+T+ G   AA      H      ++     Y +SS W  QH+   TQ++P  S
Sbjct: 131 RASTARNSTSGGGSTAAGVPTLDHQASANYYYNNNNQYASSSPWHHQHN---TQRVPYYS 190

Query: 219 PAAMNNESMFIGNDDVRRTEPE-NGISFLSWRLNVTDHRPSLVPDFT 262
           PA  NNE  ++  DDVR  + +     FLSWRLNV D R  LV DFT
Sbjct: 191 PA--NNEYSYV--DDVRVVDHDVTTDPFLSWRLNVAD-RTGLVHDFT 210

[Close]

BLAST of Lag0019190 vs. ExPASy Swiss-Prot
Match: B8AX51 (GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.8e-28
Identity = 93/203 (45.81%), Postives = 109/203 (53.69%), Query Frame = 0


Query: 1   MMHHCGGGGGGG-------------GASSFSVFLSVPN----------HGAAHEMMDIYS 60
           M+HH   GG G               +S+FS+F  + N            AA++     +
Sbjct: 1   MLHHYYSGGAGHHQDVAAAGSPGDMASSTFSLFFPMSNGQCWPPSTVEESAAYDDHSTVT 60

Query: 61  TNYPSSSSSSPSSVDCTLSLGTPSTRSSELDSDKRAAARHHRRSAGSYVS----NFCWDL 120
           T+  S SSSS  SVDCTLSLGTPS+R +E  +    AA H       Y S       WD 
Sbjct: 61  TSPSSPSSSSTGSVDCTLSLGTPSSRRAEPVAAAAPAANHGAPVPAHYPSLSAATVSWDA 120

Query: 121 LHPKH----KSTARSGAGNSAAAPPGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNAC 173
               +    +    +GA   AA   G D LL RRCANC T STPLWRNGPRGPKSLCNAC
Sbjct: 121 TAESYYCGQQGRPATGAAKCAAG-AGHDALLDRRCANCGTASTPLWRNGPRGPKSLCNAC 180

[Close]

BLAST of Lag0019190 vs. ExPASy Swiss-Prot
Match: Q6L5E5 (GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.8e-28
Identity = 93/203 (45.81%), Postives = 109/203 (53.69%), Query Frame = 0


Query: 1   MMHHCGGGGGGG-------------GASSFSVFLSVPN----------HGAAHEMMDIYS 60
           M+HH   GG G               +S+FS+F  + N            AA++     +
Sbjct: 1   MLHHYYSGGAGHHQDVAAAGSPGDMASSTFSLFFPMSNGQCWPPSTVEESAAYDDHSTVT 60

Query: 61  TNYPSSSSSSPSSVDCTLSLGTPSTRSSELDSDKRAAARHHRRSAGSYVS----NFCWDL 120
           T+  S SSSS  SVDCTLSLGTPS+R +E  +    AA H       Y S       WD 
Sbjct: 61  TSPSSPSSSSTGSVDCTLSLGTPSSRRAEPVAAAAPAANHGAPVPAHYPSLSAATVSWDA 120

Query: 121 LHPKH----KSTARSGAGNSAAAPPGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNAC 173
               +    +    +GA   AA   G D LL RRCANC T STPLWRNGPRGPKSLCNAC
Sbjct: 121 TAESYYCGQQGRPATGAAKCAAG-AGHDALLDRRCANCGTASTPLWRNGPRGPKSLCNAC 180

[Close]

BLAST of Lag0019190 vs. ExPASy Swiss-Prot
Match: Q9ZPX0 (GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-27
Identity = 97/247 (39.27%), Postives = 125/247 (50.61%), Query Frame = 0


Query: 15  SSFSVFLSVPNHGAAHEMMDIYSTNYPSSSSSSPSSVDCTLSLGTPSTRSSELDSDKRAA 74
           S+FS+F S  N    H   D      P ++ SS +SVDCTLSLGTPSTR   LD   R +
Sbjct: 8   SNFSMFFSSENDDQNHHNYD------PYNNFSSSTSVDCTLSLGTPSTR---LDDHHRFS 67

Query: 75  ARHHRRSAGSYVSNFCWDLLHPKHKSTARSGAGNSAAAPPGGDPLLARRCANCDTTSTPL 134
           + +    +G +        +H  +  T+    G  A + P       RRCA+CDTTSTPL
Sbjct: 68  SANSNNISGDF-------YIHGGNAKTSSYKKGGVAHSLP-------RRCASCDTTSTPL 127

Query: 135 WRNGPRGPKSLCNACGIRFKKEERRAAATVNTTAVG--AAAE--------------SNHH 194
           WRNGP+GPKSLCNACGIRFKKEERRA A   T + G  +AAE              S+HH
Sbjct: 128 WRNGPKGPKSLCNACGIRFKKEERRATARNLTISGGGSSAAEVPVENSYNGGGNYYSHHH 187

Query: 195 HHYQQQQHHMFGGNYTNSSTWVPQHSPVTTQKLPCLSPAAMNNESMFIGNDDVRRTEPEN 246
           HHY            ++S +W  Q+    TQ++P  SP     E  ++ N          
Sbjct: 188 HHYA-----------SSSPSWAHQN----TQRVPYFSPVP-EMEYPYVDN--------VT 207

[Close]

BLAST of Lag0019190 vs. ExPASy TrEMBL
Match: A0A6J1FQ08 (GATA transcription factor 19-like OS=Cucurbita moschata OX=3662 GN=LOC111447753 PE=3 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.9e-119
Identity = 227/267 (85.02%), Postives = 233/267 (87.27%), Query Frame = 0


Query: 1   MMHHCGGGGGGGGASSFSVFLSVPNH-GAAHEMMDIYSTNY---PSSSSSSPSSVDCTLS 60
           MMHHC GGG GG ASSFSVFLSVPNH GAAH+MMDIYS NY    SSSSSSPSSVDCTLS
Sbjct: 1   MMHHC-GGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLS 60

Query: 61  LGTPSTRSSELDSDKRAAARHHRRSAGSYVSNFCWDLLHPKHKSTARSGAGNSAAAPPGG 120
           LGTPSTRSSE DSDKRAA RHHRRSAGSYVSNFCWDLLHPKHKS  RS A N+AA P GG
Sbjct: 61  LGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGG 120

Query: 121 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNTTAVGAAAESN 180
           DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVN TA   AAESN
Sbjct: 121 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESN 180

Query: 181 HHHHYQQQQHHMFGGNYTNS-STWVPQHSPVTTQKLPCLSPAAMNNESMFIGNDDVRRTE 240
           +HHH   Q H MF GNYTNS + WVP HSPV TQKLPCLS AA+NNESMFIGNDDVRRTE
Sbjct: 181 NHHHL-HQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTE 240

Query: 241 PENGISFLSWRLNVTDHRPSLVPDFTR 263
            ENGIS+LSWRLNVTDHRPSLV DFTR
Sbjct: 241 QENGISYLSWRLNVTDHRPSLVHDFTR 265

[Close]

BLAST of Lag0019190 vs. ExPASy TrEMBL
Match: A0A6J1IYZ2 (GATA transcription factor 19-like OS=Cucurbita maxima OX=3661 GN=LOC111481178 PE=3 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.6e-117
Identity = 226/268 (84.33%), Postives = 232/268 (86.57%), Query Frame = 0


Query: 1   MMHHCGGGGGGGGASSFSVFLSVPNH-GAAHEMMDIYSTNY---PSSSSSSPSSVDCTLS 60
           MMHHC  GG GG ASSFSVFLSVPNH GAAH+MMDIYS NY    SSSSSSPSSVDCTLS
Sbjct: 1   MMHHC--GGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLS 60

Query: 61  LGTPSTRSSELDSDKRAAARHHRRSAGSYVSNFCWDLLHPKHKSTARSGAGNSAAAPPGG 120
           LGTPSTRSSE DSDKRAA RHHR SAGSYVSNFCWDLLHPKHKS  RS A N+AA P GG
Sbjct: 61  LGTPSTRSSEFDSDKRAAPRHHRHSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGG 120

Query: 121 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNTTAVGAAAESN 180
           DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVN TA   AAESN
Sbjct: 121 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESN 180

Query: 181 HHHHYQQQQHHMFGGNYTNSS-TWVPQHSPVTTQKLPCLS-PAAMNNESMFIGNDDVRRT 240
           +HHH   Q H MF GNYTNSS TWVP HSPV TQKLPCLS  AA++NESMFIGNDDVRRT
Sbjct: 181 NHHH-PHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAISNESMFIGNDDVRRT 240

Query: 241 EPENGISFLSWRLNVTDHRPSLVPDFTR 263
           E ENGIS+LSWRLNVTDHRPSLV DFTR
Sbjct: 241 EQENGISYLSWRLNVTDHRPSLVHDFTR 265

[Close]

BLAST of Lag0019190 vs. ExPASy TrEMBL
Match: A0A0A0KY15 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G046650 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.5e-93
Identity = 203/278 (73.02%), Postives = 215/278 (77.34%), Query Frame = 0


Query: 1   MMHHCGGGGGGGGASSFSVFLSVPNHGAAHEMMDIY--STNYPSSSSSSPSSVDCTLSLG 60
           MMHH  GGGGGG ASSFSVFLSVPNHGAA    D+Y  STNY +SSSSSPSSVDCTLSLG
Sbjct: 1   MMHHY-GGGGGGSASSFSVFLSVPNHGAA----DMYSSSTNY-ASSSSSPSSVDCTLSLG 60

Query: 61  TPSTRSSELDSDKRAAA----RHHRRSAGSYVSNFCWDLLHPKHKSTARSGAGN------ 120
           TPSTRSSE D DKRAAA     HHRRSAGSYVSNFCWDLLHPKHK++ R G G       
Sbjct: 61  TPSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNNN 120

Query: 121 -SAAAPPGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR-AAATVNT 180
            +AA   GGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR AAATVN+
Sbjct: 121 INAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNS 180

Query: 181 TAVGAAAESNHHHHYQQQQHHMFGGNYTNSSTWVPQHSPVTTQKLPCLSPAAMNNESMFI 240
               + AESNHHHH+    H MF G+YTNS+TWVPQ  P TTQK PCLS A        I
Sbjct: 181 ----SVAESNHHHHH--HHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAA--------I 240

Query: 241 GNDDVRRTEPENGISFLSWRLNV--TDHRPSLVPDFTR 263
           GN+DV    PENGISFLSWRLNV  TDHRP+LV DFTR
Sbjct: 241 GNEDV---GPENGISFLSWRLNVANTDHRPTLVHDFTR 255

[Close]

BLAST of Lag0019190 vs. ExPASy TrEMBL
Match: A0A1S3BSF9 (GATA transcription factor 18-like OS=Cucumis melo OX=3656 GN=LOC103493199 PE=3 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.7e-92
Identity = 205/279 (73.48%), Postives = 215/279 (77.06%), Query Frame = 0


Query: 1   MMHHC--GGGGGGGGASSFSVFLSVPNHGAAHEMMDIY--STNY---PSSSSSSPSSVDC 60
           MMHH   GGGGGGGGASSFS+FLSVPNHGAA    D+Y  STNY    SSSSSSPSSVDC
Sbjct: 1   MMHHYGGGGGGGGGGASSFSLFLSVPNHGAA----DMYSSSTNYASSSSSSSSSPSSVDC 60

Query: 61  TLSLGTPSTRSSELDSDKRAAARH-HRRSAGSYVSNFCWDLLHPKHKSTARSGAGN---- 120
           TLSLGTPSTRSSE DSDKRAAAR+ HRRSAGSYVSNFCWDLLHPKHK++ R   G     
Sbjct: 61  TLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASNN 120

Query: 121 --SAAAPPGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR-AAATVN 180
             +AA    GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR AAATVN
Sbjct: 121 NITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVN 180

Query: 181 TTAVGAAAESNHHHHYQQQQHHMFGGNYTNSSTWVPQHSPVTTQKLPCLSPAAMNNESMF 240
           +    + AESNHHH      H MF G+YTNSSTWVPQ  P TTQK PCLS A        
Sbjct: 181 S----STAESNHHH------HSMFNGSYTNSSTWVPQQLPATTQKHPCLSAA-------- 240

Query: 241 IGNDDVRRTEPENGISFLSWRLNV--TDHRPSLVPDFTR 263
           IGNDDV    PENGISFLSWRLNV  TDHRP+LV DFTR
Sbjct: 241 IGNDDV---GPENGISFLSWRLNVANTDHRPTLVHDFTR 254

[Close]

BLAST of Lag0019190 vs. ExPASy TrEMBL
Match: A0A5A7TMS0 (GATA transcription factor 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00840 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 6.9e-81
Identity = 176/236 (74.58%), Postives = 185/236 (78.39%), Query Frame = 0


Query: 37  STNYPSSSSSSPSSVDCTLSLGTPSTRSSELDSDKRAAARH-HRRSAGSYVSNFCWDLLH 96
           STNY +SSSSSPSSVDCTLSLGTPSTRSSE DSDKRAAAR+ HRRSAGSYVSNFCWDLLH
Sbjct: 5   STNY-ASSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLH 64

Query: 97  PKHKSTARSGAGN------SAAAPPGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNAC 156
           PKHK++ R   G       +AA   GGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNAC
Sbjct: 65  PKHKTSGRGAVGAASNNNITAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNAC 124

Query: 157 GIRFKKEERR-AAATVNTTAVGAAAESNHHHHYQQQQHHMFGGNYTNSSTWVPQHSPVTT 216
           GIRFKKEERR AAATVN+    + AESNHHH      H MF G+YTNSSTWVPQ  P TT
Sbjct: 125 GIRFKKEERRAAAATVNS----STAESNHHH------HSMFNGSYTNSSTWVPQQLPATT 184

Query: 217 QKLPCLSPAAMNNESMFIGNDDVRRTEPENGISFLSWRLNV--TDHRPSLVPDFTR 263
           QK PCLS A        IGNDDV    PENGISFLSWRLNV  TDHRP+LV DFTR
Sbjct: 185 QKHPCLSAA--------IGNDDV---GPENGISFLSWRLNVANTDHRPTLVHDFTR 218

[Close]

BLAST of Lag0019190 vs. TAIR 10
Match: AT3G50870.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 185.7 bits (470), Expect = 4.9e-47
Identity = 130/295 (44.07%), Postives = 149/295 (50.51%), Query Frame = 0


Query: 1   MMHH-----CGGGGGGGGASSFSVFLSVPNHGAAHEMMDIYSTNYPSSSSSSPSSVDCTL 60
           M HH     C        A S+S+  S+ N G   +  + Y          S S VDCTL
Sbjct: 20  MFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFEQNGEDY--------HHSSSLVDCTL 79

Query: 61  SLGTPSTRSSELDSDKRAAARHHRRSAGSYVSNFCWDLLHPKHK---------------- 120
           SLGTPSTR  E D  +R   R     A S +SNF WDL+H K+                 
Sbjct: 80  SLGTPSTRLCEEDEKRR---RSTSSGASSCISNF-WDLIHTKNNNSKTAPYNNVPSFSAN 139

Query: 121 --STARSGAGNSAAAPPGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEE 180
             S   SG G       GGD LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEE
Sbjct: 140 KPSRGCSGGGGGGGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEE 199

Query: 181 RRAAATVNTTAVGAAA----ESNHHHHYQQQQHHMFGGNYTNSSTWVPQHSPVTTQKLPC 240
           RR  A    T VGAA     +  HH+      H     N  N + W   HS   TQ++PC
Sbjct: 200 RRTTAATGNTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHHS---TQRVPC 259

Query: 241 LSPAAMNNESMFIGN------DDVRRTEPENGISFLSWRLNVTDHRPSLVPDFTR 263
             PA   NE  F+ +      ++V       G+ FLSWRLNV D R SLV DFTR
Sbjct: 260 NYPA---NEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVAD-RASLVHDFTR 295

[Close]

BLAST of Lag0019190 vs. TAIR 10
Match: AT4G36620.1 (GATA transcription factor 19 )

HSP 1 Score: 159.8 bits (403), Expect = 2.9e-39
Identity = 113/227 (49.78%), Postives = 131/227 (57.71%), Query Frame = 0


Query: 39  NYPSSSSSSPSSVDCTLSLGTPSTRSSELDSDKRAAARHHRRSAGSYVSNFCWDLLHPKH 98
           N  S  SS  +SVDCTLSLGTPSTR    D D+R  + H   + G       WD L+   
Sbjct: 11  NDVSHHSSPYASVDCTLSLGTPSTRLCNED-DERRFSSHTSDTIG-------WDFLNGSK 70

Query: 99  KSTARSGAGNSAAAPPGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 158
           K     G G       GG  LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER
Sbjct: 71  K-----GGGG------GGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 130

Query: 159 RAAATVNTTAVG---AAAESNHHHHYQQQQHHMFGGNYTNSSTWVPQHSPVTTQKLPCLS 218
           RA+   N+T+ G   AA      H      ++     Y +SS W  QH+   TQ++P  S
Sbjct: 131 RASTARNSTSGGGSTAAGVPTLDHQASANYYYNNNNQYASSSPWHHQHN---TQRVPYYS 190

Query: 219 PAAMNNESMFIGNDDVRRTEPE-NGISFLSWRLNVTDHRPSLVPDFT 262
           PA  NNE  ++  DDVR  + +     FLSWRLNV D R  LV DFT
Sbjct: 191 PA--NNEYSYV--DDVRVVDHDVTTDPFLSWRLNVAD-RTGLVHDFT 210

[Close]

BLAST of Lag0019190 vs. TAIR 10
Match: AT2G18380.1 (GATA transcription factor 20 )

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-28
Identity = 97/247 (39.27%), Postives = 125/247 (50.61%), Query Frame = 0


Query: 15  SSFSVFLSVPNHGAAHEMMDIYSTNYPSSSSSSPSSVDCTLSLGTPSTRSSELDSDKRAA 74
           S+FS+F S  N    H   D      P ++ SS +SVDCTLSLGTPSTR   LD   R +
Sbjct: 8   SNFSMFFSSENDDQNHHNYD------PYNNFSSSTSVDCTLSLGTPSTR---LDDHHRFS 67

Query: 75  ARHHRRSAGSYVSNFCWDLLHPKHKSTARSGAGNSAAAPPGGDPLLARRCANCDTTSTPL 134
           + +    +G +        +H  +  T+    G  A + P       RRCA+CDTTSTPL
Sbjct: 68  SANSNNISGDF-------YIHGGNAKTSSYKKGGVAHSLP-------RRCASCDTTSTPL 127

Query: 135 WRNGPRGPKSLCNACGIRFKKEERRAAATVNTTAVG--AAAE--------------SNHH 194
           WRNGP+GPKSLCNACGIRFKKEERRA A   T + G  +AAE              S+HH
Sbjct: 128 WRNGPKGPKSLCNACGIRFKKEERRATARNLTISGGGSSAAEVPVENSYNGGGNYYSHHH 187

Query: 195 HHYQQQQHHMFGGNYTNSSTWVPQHSPVTTQKLPCLSPAAMNNESMFIGNDDVRRTEPEN 246
           HHY            ++S +W  Q+    TQ++P  SP     E  ++ N          
Sbjct: 188 HHYA-----------SSSPSWAHQN----TQRVPYFSPVP-EMEYPYVDN--------VT 207

[Close]

BLAST of Lag0019190 vs. TAIR 10
Match: AT4G26150.1 (cytokinin-responsive gata factor 1 )

HSP 1 Score: 74.3 bits (181), Expect = 1.6e-13
Identity = 36/70 (51.43%), Postives = 44/70 (62.86%), Query Frame = 0


Query: 104 SGAGNSAAAPPGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAT 163
           S   NS       +  + R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A AT
Sbjct: 181 SNLSNSERQNGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAT 240

Query: 164 VNTTAVGAAA 174
              TAV   +
Sbjct: 241 ATATAVSGVS 250

[Close]

BLAST of Lag0019190 vs. TAIR 10
Match: AT5G56860.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.1e-11
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 0


Query: 122 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA 163
           R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A A
Sbjct: 230 RVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMA 270

The following BLAST results are available for this feature:

BLAST of Lag0019190 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600583.1	5.9e-119	85.34	GATA transcription factor 18, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022942846.1	5.9e-119	85.02	GATA transcription factor 19-like [Cucurbita moschata]	[more]
XP_023533953.1	2.9e-118	85.28	GATA transcription factor 19-like [Cucurbita pepo subsp. pepo]	[more]
XP_022982306.1	9.4e-117	84.33	GATA transcription factor 19-like [Cucurbita maxima]	[more]
XP_038875549.1	3.3e-93	75.46	GATA transcription factor 18-like [Benincasa hispida]	[more]

BLAST of Lag0019190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LC79	6.9e-46	44.07	GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2	[more]
Q6QPM2	4.1e-38	49.78	GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2	[more]
B8AX51	3.8e-28	45.81	GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE...	[more]
Q6L5E5	3.8e-28	45.81	GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 ...	[more]
Q9ZPX0	1.9e-27	39.27	GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2	[more]

BLAST of Lag0019190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FQ08	2.9e-119	85.02	GATA transcription factor 19-like OS=Cucurbita moschata OX=3662 GN=LOC111447753 ...	[more]
A0A6J1IYZ2	4.6e-117	84.33	GATA transcription factor 19-like OS=Cucurbita maxima OX=3661 GN=LOC111481178 PE...	[more]
A0A0A0KY15	3.5e-93	73.02	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G046650 P...	[more]
A0A1S3BSF9	1.7e-92	73.48	GATA transcription factor 18-like OS=Cucumis melo OX=3656 GN=LOC103493199 PE=3 S...	[more]
A0A5A7TMS0	6.9e-81	74.58	GATA transcription factor 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Lag0019190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50870.1	4.9e-47	44.07	GATA type zinc finger transcription factor family protein	[more]
AT4G36620.1	2.9e-39	49.78	GATA transcription factor 19	[more]
AT2G18380.1	1.3e-28	39.27	GATA transcription factor 20	[more]
AT4G26150.1	1.6e-13	51.43	cytokinin-responsive gata factor 1	[more]
AT5G56860.1	1.1e-11	70.73	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 118..170 e-value: 2.5E-19 score: 80.2
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 124..158 e-value: 6.4E-18 score: 64.1
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 124..149
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 118..154 score: 13.889895
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 123..155 e-value: 8.33313E-14 score: 62.3902
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 120..187 e-value: 1.5E-16 score: 62.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..64
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 121..159
IPR044272	GATA transcription factor 18/19/20	PANTHER	PTHR46813	GATA TRANSCRIPTION FACTOR 18	coord: 14..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0019190.1	Lag0019190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009908	flower development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0031969	chloroplast membrane
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding