Lag0019175 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0019175
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionbZIP transcription factor 44-like
Locationchr5: 39558156 .. 39558611 (-)
RNA-Seq ExpressionLag0019175
SyntenyLag0019175
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCTCCGGTAGGAAGTTCATCGGGATCTCCCAGCTCCGACGAAGATCTGCGGCTGATCGTGGATCAGAGGAAGAGGAAGAGAATGATATCGAATCGAGAATCGGCTCGCCGATCTAGGATGCGAAAACAGAAGCAGCTCGACGATCTGACGGCTCAGGTGAGCCAGATCAGAACGGAGAATGAGCAGATCGCCGTTAACACCAATTTCACCACCCAACTTTACCTGAGTCTGGAGGCGGAGAACTCGGTGCTCCGGGCACAGATGGCGGAGCTCCGCCACAGATTGGACTCGCTTAACGAAATCATTGGCTTCATAAACTCGAGTACTAGAAATCTGTATGATTCTGAGGATCACGATGAAGTTTCCGGCATTGATGGGTTTGTTGATTCGTGGGGATTCCCCTTTCTCAACCAGCCAATCATGGCGGCTGGTGACATGTTTATGTGCTGA

mRNA sequence

ATGGCGTCTCCGGTAGGAAGTTCATCGGGATCTCCCAGCTCCGACGAAGATCTGCGGCTGATCGTGGATCAGAGGAAGAGGAAGAGAATGATATCGAATCGAGAATCGGCTCGCCGATCTAGGATGCGAAAACAGAAGCAGCTCGACGATCTGACGGCTCAGGTGAGCCAGATCAGAACGGAGAATGAGCAGATCGCCGTTAACACCAATTTCACCACCCAACTTTACCTGAGTCTGGAGGCGGAGAACTCGGTGCTCCGGGCACAGATGGCGGAGCTCCGCCACAGATTGGACTCGCTTAACGAAATCATTGGCTTCATAAACTCGAGTACTAGAAATCTGTATGATTCTGAGGATCACGATGAAGTTTCCGGCATTGATGGGTTTGTTGATTCGTGGGGATTCCCCTTTCTCAACCAGCCAATCATGGCGGCTGGTGACATGTTTATGTGCTGA

Coding sequence (CDS)

ATGGCGTCTCCGGTAGGAAGTTCATCGGGATCTCCCAGCTCCGACGAAGATCTGCGGCTGATCGTGGATCAGAGGAAGAGGAAGAGAATGATATCGAATCGAGAATCGGCTCGCCGATCTAGGATGCGAAAACAGAAGCAGCTCGACGATCTGACGGCTCAGGTGAGCCAGATCAGAACGGAGAATGAGCAGATCGCCGTTAACACCAATTTCACCACCCAACTTTACCTGAGTCTGGAGGCGGAGAACTCGGTGCTCCGGGCACAGATGGCGGAGCTCCGCCACAGATTGGACTCGCTTAACGAAATCATTGGCTTCATAAACTCGAGTACTAGAAATCTGTATGATTCTGAGGATCACGATGAAGTTTCCGGCATTGATGGGTTTGTTGATTCGTGGGGATTCCCCTTTCTCAACCAGCCAATCATGGCGGCTGGTGACATGTTTATGTGCTGA

Protein sequence

MASPVGSSSGSPSSDEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTAQVSQIRTENEQIAVNTNFTTQLYLSLEAENSVLRAQMAELRHRLDSLNEIIGFINSSTRNLYDSEDHDEVSGIDGFVDSWGFPFLNQPIMAAGDMFMC
Homology
[Close]
BLAST of Lag0019175 vs. NCBI nr
Match: XP_038897679.1 (bZIP transcription factor 44-like [Benincasa hispida])

HSP 1 Score: 265.4 bits (677), Expect = 3.0e-67
Identity = 139/151 (92.05%), Postives = 145/151 (96.03%), Query Frame = 0 

Query: 1   MASPVGSSSGSPSSDEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTAQVSQIRT 60
           MASPVGSSSGSPSSDEDLR IVDQRKRKRMISNRESARRSRMRKQKQLDDLT+QV QIRT
Sbjct: 1   MASPVGSSSGSPSSDEDLRQIVDQRKRKRMISNRESARRSRMRKQKQLDDLTSQVGQIRT 60

Query: 61  ENEQIAVNTNFTTQLYLSLEAENSVLRAQMAELRHRLDSLNEIIGFINSSTRNLYDSEDH 120
           ENEQIAVN NFTTQLY++LEAENSVLRAQM ELRHRLDSLNEII F+NSSTRNL+DSEDH
Sbjct: 61  ENEQIAVNINFTTQLYVNLEAENSVLRAQMVELRHRLDSLNEIISFMNSSTRNLFDSEDH 120

Query: 121 DEVSGIDGFVDSWGFPFLNQPIMAAGDMFMC 152
            EVSGIDGFVDSWGFPFLNQPIMAAGD+FMC
Sbjct: 121 HEVSGIDGFVDSWGFPFLNQPIMAAGDLFMC 151

[Close]
BLAST of Lag0019175 vs. NCBI nr
Match: AOZ56991.1 (bZIP2 [Citrullus lanatus])

HSP 1 Score: 259.2 bits (661), Expect = 2.2e-65
Identity = 136/151 (90.07%), Postives = 142/151 (94.04%), Query Frame = 0 

Query: 1   MASPVGSSSGSPSSDEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTAQVSQIRT 60
           MASPVGSSSGSPSSDEDLR IVDQRKRKRMISNRESARRSRMRKQKQLDDLT+QV QIRT
Sbjct: 1   MASPVGSSSGSPSSDEDLRQIVDQRKRKRMISNRESARRSRMRKQKQLDDLTSQVGQIRT 60

Query: 61  ENEQIAVNTNFTTQLYLSLEAENSVLRAQMAELRHRLDSLNEIIGFINSSTRNLYDSEDH 120
           ENEQIAVN NFT QLY++LEAENSVLRAQM ELRHRLDSLNEII F+NSSTRNL+DSEDH
Sbjct: 61  ENEQIAVNINFTNQLYVNLEAENSVLRAQMVELRHRLDSLNEIISFMNSSTRNLFDSEDH 120

Query: 121 DEVSGIDGFVDSWGFPFLNQPIMAAGDMFMC 152
            E  GIDGFVDSWGFPFLNQPIMAAGD+FMC
Sbjct: 121 YEAPGIDGFVDSWGFPFLNQPIMAAGDLFMC 151

[Close]
BLAST of Lag0019175 vs. NCBI nr
Match: XP_011653153.1 (bZIP transcription factor 44 [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 2.2e-65
Identity = 135/151 (89.40%), Postives = 146/151 (96.69%), Query Frame = 0 

Query: 1   MASPVGSSSGSPSSDEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTAQVSQIRT 60
           MASP+GSSSGSPSSDEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLT+QV QIRT
Sbjct: 1   MASPLGSSSGSPSSDEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTSQVGQIRT 60

Query: 61  ENEQIAVNTNFTTQLYLSLEAENSVLRAQMAELRHRLDSLNEIIGFINSSTRNLYDSEDH 120
           ENEQIAVN NFTTQLY++LEAENSVLRAQM ELRHRLDSLNEII F+NSS+R++YDSE++
Sbjct: 61  ENEQIAVNINFTTQLYVNLEAENSVLRAQMVELRHRLDSLNEIIRFMNSSSRHVYDSEEN 120

Query: 121 DEVSGIDGFVDSWGFPFLNQPIMAAGDMFMC 152
           DEV GIDGFVDSWGFPFLNQPIMAAGD+FMC
Sbjct: 121 DEVCGIDGFVDSWGFPFLNQPIMAAGDLFMC 151

[Close]
BLAST of Lag0019175 vs. NCBI nr
Match: KAA0044785.1 (bZIP transcription factor 53 [Cucumis melo var. makuwa])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 137/152 (90.13%), Postives = 145/152 (95.39%), Query Frame = 0 

Query: 1   MASPVGSSSGSPSSDEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTAQVSQIRT 60
           MASPVGSSSGSPSSDEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLT+QV QIRT
Sbjct: 1   MASPVGSSSGSPSSDEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTSQVGQIRT 60

Query: 61  ENEQIAVNTNFTTQLYLSLEAENSVLRAQMAELRHRLDSLNEIIGFINSSTRNLYD-SED 120
           ENEQIAVN NFTTQLY++LEAENSVLRAQM ELRHRLDSLNEII F+NSSTR+LYD SE+
Sbjct: 61  ENEQIAVNINFTTQLYVNLEAENSVLRAQMVELRHRLDSLNEIIRFMNSSTRHLYDNSEE 120

Query: 121 HDEVSGIDGFVDSWGFPFLNQPIMAAGDMFMC 152
           +DE  GIDGFVDSWGFPFLNQPIMAAGD+FMC
Sbjct: 121 NDEACGIDGFVDSWGFPFLNQPIMAAGDLFMC 152

[Close]
BLAST of Lag0019175 vs. NCBI nr
Match: XP_008452107.1 (PREDICTED: bZIP transcription factor 53 [Cucumis melo] >TYK16680.1 bZIP transcription factor 53 [Cucumis melo var. makuwa])

HSP 1 Score: 256.5 bits (654), Expect = 1.4e-64
Identity = 137/152 (90.13%), Postives = 144/152 (94.74%), Query Frame = 0 

Query: 1   MASPVGSSSGSPSSDEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTAQVSQIRT 60
           MASPVGSSSGSPSSDEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLT+QV QIRT
Sbjct: 1   MASPVGSSSGSPSSDEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTSQVGQIRT 60

Query: 61  ENEQIAVNTNFTTQLYLSLEAENSVLRAQMAELRHRLDSLNEIIGFINSSTRNLYD-SED 120
           ENEQIAVN NFTTQLY++LEAENSVLRAQM ELRHRLDSLNEII F+NSSTR LYD SE+
Sbjct: 61  ENEQIAVNINFTTQLYVNLEAENSVLRAQMVELRHRLDSLNEIIRFMNSSTRRLYDNSEE 120

Query: 121 HDEVSGIDGFVDSWGFPFLNQPIMAAGDMFMC 152
           +DE  GIDGFVDSWGFPFLNQPIMAAGD+FMC
Sbjct: 121 NDEACGIDGFVDSWGFPFLNQPIMAAGDLFMC 152

[Close]
BLAST of Lag0019175 vs. ExPASy Swiss-Prot
Match: C0Z2L5 (bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-28
Identity = 79/155 (50.97%), Postives = 97/155 (62.58%), Query Frame = 0 

Query: 3   SPVGSSSGSPSSDEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTAQVSQIRTEN 62
           S  G ++    SD   R ++D+RKRKR  SNRESARRSRMRKQK LDDLTAQV+ +R EN
Sbjct: 19  STTGLANSGSESDLRQRDLIDERKRKRKQSNRESARRSRMRKQKHLDDLTAQVTHLRKEN 78

Query: 63  EQIAVNTNFTTQLYLSLEAENSVLRAQMAELRHRLDSLNEIIGFINSSTRNLYDSEDHDE 122
            QI      TTQ Y+++EAEN +LRAQ+ EL HRL SLNEI+ F+ SS+           
Sbjct: 79  AQIVAGIAVTTQHYVTIEAENDILRAQVLELNHRLQSLNEIVDFVESSSSGFGMETGQGL 138

Query: 123 VSG--IDGFVDSWGFPFLNQPIMA----AGDMFMC 152
             G   DG ++     F NQPIMA    AGD+F C
Sbjct: 139 FDGGLFDGVMNPMNLGFYNQPIMASASTAGDVFNC 173

[Close]
BLAST of Lag0019175 vs. ExPASy Swiss-Prot
Match: O65683 (bZIP transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=BZIP11 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.9e-27
Identity = 78/155 (50.32%), Postives = 108/155 (69.68%), Query Frame = 0 

Query: 2   ASPVGSSSGSPSSDEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTAQVSQIRTE 61
           +S + +SSGS  S      +++QRKRKRM+SNRESARRSRM+KQK LDDLTAQV+ ++ E
Sbjct: 10  SSTIQTSSGSEES------LMEQRKRKRMLSNRESARRSRMKKQKLLDDLTAQVNHLKKE 69

Query: 62  NEQIAVNTNFTTQLYLSLEAENSVLRAQMAELRHRLDSLNEIIGFINSSTRNLYDSED-- 121
           N +I  + + TTQ YL++EAENSVLRAQ+ EL HRL SLN+II F++SS  N  ++    
Sbjct: 70  NTEIVTSVSITTQHYLTVEAENSVLRAQLDELNHRLQSLNDIIEFLDSSNNNNNNNMGMC 129

Query: 122 HDEVSGI---DGFVDSWGFPF-LNQPIMAAGDMFM 151
            + + G+   D FV+     + +NQP+MA+ D  M
Sbjct: 130 SNPLVGLECDDFFVNQMNMSYIMNQPLMASSDALM 158

[Close]
BLAST of Lag0019175 vs. ExPASy Swiss-Prot
Match: Q9SI15 (bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-25
Identity = 76/153 (49.67%), Postives = 96/153 (62.75%), Query Frame = 0 

Query: 7   SSSGSPSSDEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTAQVSQIRTENEQIA 66
           SS G  ++  D  + VD+RKRKRM+SNRESARRSRMRKQK +DDLTAQ++Q+  +N QI 
Sbjct: 13  SSDGGNNNPSDSVVTVDERKRKRMLSNRESARRSRMRKQKHVDDLTAQINQLSNDNRQIL 72

Query: 67  VNTNFTTQLYLSLEAENSVLRAQMAELRHRLDSLNEIIGFINSSTRNL-YDSED----HD 126
            +   T+QLY+ ++AENSVL AQM EL  RL SLNEI+  + S+      D  D     D
Sbjct: 73  NSLTVTSQLYMKIQAENSVLTAQMEELSTRLQSLNEIVDLVQSNGAGFGVDQIDGCGFDD 132

Query: 127 EVSGIDGFVDS---------W-GFPFLNQPIMA 145
              GIDG+ D          W G  + NQPIMA
Sbjct: 133 RTVGIDGYYDDMNMMSNVNHWGGSVYTNQPIMA 165

[Close]
BLAST of Lag0019175 vs. ExPASy Swiss-Prot
Match: Q9LZP8 (bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.6e-21
Identity = 63/143 (44.06%), Postives = 87/143 (60.84%), Query Frame = 0 

Query: 11  SPSSDEDLR--LIVDQRKRKRMISNRESARRSRMRKQKQLDDLTAQVSQIRTENEQIAVN 70
           SP SD D R   + D+RKRKRMISNRESARRSRMRKQKQL DL  +V+ ++ +N +I   
Sbjct: 9   SPESDNDPRYATVTDERKRKRMISNRESARRSRMRKQKQLGDLINEVTLLKNDNAKITEQ 68

Query: 71  TNFTTQLYLSLEAENSVLRAQMAELRHRLDSLNEIIGFINSSTRNLYDSEDHDEVSGIDG 130
            +  ++ Y+ +E++N+VLRAQ +EL  RL SLN ++  +   +    D  +  E      
Sbjct: 69  VDEASKKYIEMESKNNVLRAQASELTDRLRSLNSVLEMVEEISGQALDIPEIPE-----S 128

Query: 131 FVDSWGFPFLNQPIMAAGDMFMC 152
             + W  P   QPI A+ DMF C
Sbjct: 129 MQNPWQMPCPMQPIRASADMFDC 146

[Close]
BLAST of Lag0019175 vs. ExPASy Swiss-Prot
Match: P24068 (Ocs element-binding factor 1 OS=Zea mays OX=4577 GN=OBF1 PE=2 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 3.8e-12
Identity = 46/136 (33.82%), Postives = 77/136 (56.62%), Query Frame = 0 

Query: 2   ASPVGSSSGSPSSDEDLRLIVDQRKRKRMISNRESARRSRMRKQKQLDDLTAQVSQIRTE 61
           +S +  ++G  S  +        R+ KR +SNRESARRSR+RKQ+ LD+L  +V++++ +
Sbjct: 3   SSSLSPTAGRTSGSDGDSAADTHRREKRRLSNRESARRSRLRKQQHLDELVQEVARLQAD 62

Query: 62  NEQIAVNTNFTTQLYLSLEAENSVLRAQMAELRHRLDSLNEIIGFINSSTRNLYDSEDHD 121
           N ++A         Y  +E EN+VLRA+ AEL  RL S+NE++  +   +    D +  +
Sbjct: 63  NARVAARARDIASQYTRVEQENTVLRARAAELGDRLRSVNEVLRLVEEFSGVAMDIQ--E 122

Query: 122 EVSGIDGFVDSWGFPF 138
           E+   D  +  W  P+
Sbjct: 123 EMPADDPLLRPWQLPY 136

The following BLAST results are available for this feature:
BLAST of Lag0019175 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038897679.13.0e-6792.05bZIP transcription factor 44-like [Benincasa hispida][more]
AOZ56991.12.2e-6590.07bZIP2 [Citrullus lanatus][more]
XP_011653153.12.2e-6589.40bZIP transcription factor 44 [Cucumis sativus][more]
KAA0044785.11.1e-6490.13bZIP transcription factor 53 [Cucumis melo var. makuwa][more]
XP_008452107.11.4e-6490.13PREDICTED: bZIP transcription factor 53 [Cucumis melo] >TYK16680.1 bZIP transcri... [more]
BLAST of Lag0019175 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
C0Z2L51.3e-2850.97bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1[more]
O656831.9e-2750.32bZIP transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=BZIP11 PE=1 SV=1[more]
Q9SI151.3e-2549.67bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1[more]
Q9LZP87.6e-2144.06bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1[more]
P240683.8e-1233.82Ocs element-binding factor 1 OS=Zea mays OX=4577 GN=OBF1 PE=2 SV=2[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..103
NoneNo IPR availableCOILSCoilCoilcoord: 34..68
NoneNo IPR availableGENE3D1.20.5.170coord: 23..76
e-value: 5.2E-11
score: 44.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availablePANTHERPTHR45764BZIP TRANSCRIPTION FACTOR 44coord: 9..137
NoneNo IPR availablePANTHERPTHR45764:SF54BASIC-LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 9..137
NoneNo IPR availableCDDcd14702bZIP_plant_GBF1coord: 26..76
e-value: 2.97702E-18
score: 71.4109
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 25..78
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 21..85
e-value: 3.4E-14
score: 63.1
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 25..65
e-value: 3.9E-10
score: 39.7
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 28..43
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 23..65
score: 10.059065

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0019175.1Lag0019175.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0000976 transcription cis-regulatory region binding