Lag0019130 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0019130
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionTy3-gypsy retrotransposon protein
Locationchr5: 38922596 .. 38928484 (-)
RNA-Seq ExpressionLag0019130
SyntenyLag0019130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTTCAAGACTTCTTCAATGGTCGCTGTCATGAACAAGTCTTACATGGGTTCTACTGCCCATTGTTGCTTCAATAAACTGGCGTTGCAAGAAGATAAAGCTTCTATCGTTGCAGGCCAAGAAACAACCTTGCAAGGGGCATATACTAATGACAAGTTTATTGTTAAGTATAACCCTTTGTTTGAACATGATTCTGATGTAGTGACTGTCATGATGACTGGGACTAGAACTATGGAAGAAAGAATGGTTGAGATGCAGGAGCACATCGACACCTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGCGCAACTGAAGTGCCAAATTGAGAACCAACATATCGCCGAATCAAATCAAACCCAAGTCATAAAAAATCATGACAAAGGAAAGACTATAGTGCAAGATGATCAGCCACAGTGTTCTACTTCGATCGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTGTATCAGAGCTCAGTACGGTGGACCTACTCAAGATTCCCTCTTGTATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAATTCCAATCGGGTATCAGCCACCGAAATTTCAGCAGTTTGATGGAAAAGGCAATCCTAAACAACATATTGCCCACTTCGTTGAGACATGCGAGAACGCTGGTACTCGAGGGGACCTACTAGTCAAACAGTTCGTTCGAACACTTAAAGGAAATGCTTTTGACTGGTACACTGATCTAGAACCTGAGTCAGTAGACAGTTGGGAGGAACTCGAAAGAGAGTTTTTGAATCGCTTCTACAGCACTAGACGAACCGTTAGCATGTTCGAGCTCACAAACACTAAACAACGAAAAGGTGAACTCGTTGTTAACTATATAAATCGCTGGAGAGCTATGAGTCTAGATTGCAAAGATCGCCTCACTGAACTCTCTTCCGTTGAGATGTGCATTCAAGGCATGCACTGGGAACTCCTCTACATCCTTAAAGGTATAAAGCCTCGCACCTTTGAGGAACTAGCAACTCGTGCCCACGATATGGAGCTAAGTATTGCTAGTCGAGAAAACCAAGACCTTCTCCTCCCTAATATGAGAAAAGAAGGAAGGAACGACGAAGAGACTATAGAAGAATCTATGGTTGTCAACACAACCCTTCCCAAGTCGTCTTCGAAAGGAAAGCGACAAACAAATGGAGCGCATCACTTAACTTTAAAGGAAAGACAGAAGAAAATCTATCCTTTCCCTGATGCCGACATCCCTGATATGTTGGAACAACTATTGGAAGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCCCAAGTATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAGGATGTTTCGTCCTAAAGGACTTAATTTTAAAGCTGGCTAAGGAAGGCAAAATTGAGCTTGACCTTGATGAAGTAGCCCAATCAAATCTTGCTACAATCAAAGGAAAGAGCAAACATCAAAGAAAGAAGGATCCTAAGAAACTTCAACCCAAGAGGAAGAGAAGTAAAAAGTTTTCTCAACCTCAACAACTGGTGATGTTGAATAAATCGTTCTCCAAAAATTTCCACAAAAAGGAAAAAAAGAACCTTGCAACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAGAGTGAACAAAGGACTTCCGTCTTTGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGGCTGCGACAGAGGAAGAAAATCAATGTTTGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAAATTGGAGGTAAAACCTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAGGAAGTTATCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATCCTACAAGTCAAGGATCTGATCAAGACCATGATGAAGATAAGGGCTTTTAAAATGTAAAAGCTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGAGCCAAAAAAAAAAAAAAAAAAATCTTGAACTACGTTATGACTTGATCCCTATTCCATAAGGGTACGTAGGCAGCTTAAAGAAAATTTTAAGTTCAGTCCCTATAAACAAAAAAAAAAAAGGTTCTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACAACTGCTACGTTGTTCCTCCTCCAAGTGCGAATGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTTTCACGCCCTCCGTTGTAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACACACTTCGCTCCAGTTCCTTCTCCCAAATTCGAAGGTTCTCATGCGCTTCGCGCTGCAGTTCCTTCCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCTTTCCCCCAAGTTCGAAGGTTCTCAGGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCACTTCGCTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCGGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGCACTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCAAACGCTTCGCTGTCGTTCCTTCCTTACAGTTCGTAGGTTCTCACACGCTTCGTTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCGCTCACGCGTTTCACTGCAGTTCCTTCCTCCAATTTTGAAGGTTCTCACATCGCTTCGCTTCGCTCACGCGCTTCGCTGCGATCCTTCCCCCAAGTTCAAAGGTTCTCACGCACTCCGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTTGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCTCACGGGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATTGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCATCGCCATAGTTCCTTCCTCCGCGCATCGCCATAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACACGCTTCGCCACAGTTCCTTCCTCCCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCAAAGGTTCTCTCGCCACAGTTCCTTCCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTTCGCCACAGTTCCTTCATCCAAGTTCGAAGGTTCTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCATCGCCATAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCCACAGTTCACGCGCACTTCCTCCAAGTTCGAAGGATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTGTTCTCACGTGCATCGCGCGACAGTTCCTTCCTCCAAGTTCGCGCTTCGCCACAGTTCACGCGCACTTCCTCCAAGTTCGAAGGATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTGTTTTCCTCCAAGTTCGAAGGTTGTTCTCACGTGCATCGCGCGACAGTTCCTTCCTCCAAGTTCGAAGGTTGTTCTCACGTGCATCGCCTCCTCCAAGTTTGAAAGGTTTCTAGCTCCTAGGCTTCAAAGGCTCTCATGAGAAATATGAATCTTAAAATTTAAGATTAACAATTTTGGGACTCGAACCCATGACCTTTAAATATGCAGCTTGGCTATTAAACCAATAGACCATTCAAGTCTTTTGATTAACATTTGCTTGTTAATATATACATATATGCTATTCGGTCAACTCATATTATTCTCAATCCAAATTTTGTCAAACCCAAAATCAACCAAAGTCCCAAACTCAAATTCTATTCCAAATGCAAGTTAAAATTGGATAGAATTTTACCTCAAGCCAAAAGTTTGGCATAATCCAAATTTTATCCCAAATGAACCAAAGTCAAAACCTCAAATTCTATTCCAAATGCAAGTTAAAATTGGGTAGGATTTTACCTCAAATCAAAATTTGGGTATAAACCAAAATTTGCCCAAACTTCAAATCAAAGTTTGCTGCCAAATAAGAAAAAAAAATCATCAAAATTTTGACCAAACTTCAAATTTTGATTAATTGGCGATAAAAGTGTGTCAAATAAAAAAATCAAAATTTTGACCAAAATTCATATTTTGATTAAATTGACACACCAAAGGGAGTCAAAATCAAGAACAAATATCTTGCATTTTGATCCCAAAATATCTTTTTCGAGATTCACTCACACATAACTTGTGACTAACTCTCGAAAAGGGGGCATTTGTTGAAGGAGAAATTTTGGCCAATGACAAATTGCCACGTCATTATTTAAAATTAATGACAAAATTATAATTAATTAAATTTGGGACCAATTAGAAATTGACATGTGTCCCAAATTTAATTTGAAGACAAAGTTGGCCAATTATAAATTTTTAGGGTCAAATGTCCATTTGATCAATTAATTAAAAATAAATTATTTTGATCAGATTAATTGATTTGACCAATTAATTAAAGAAAATAATTAATTGGATCAAATTTGGGTCTTTTAAATATTTGGGTCATATGGTTTTGGGTGAAATATAAACCAGACCCAAGACCAATAAAGCCCAAGCCCAAGTTGTTAGGCCCAAAAGTCACCAGGGCCCATCCAGCGAGAACTCTATAAATAGAGGGGTTCTCCATCATTTCAAGGGTTCAGAAATTCTACACTCTCACAAAGACAAGAGTTCAGAGTTTCAAAGCTCTCAAGCAGAACCAAAGAATTCAGAGAGACTCCACCAAGTCTGAAGACCGAAAACTCTCTGCAATCCATAAGTTCAAGTGTTGAACACTTCTTGAAGACCAAACACTCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAACATTTCTTGAAGACCCAACACTCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAACATTTCTTGAAGACCCAACACTCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAACACTTCTTGAAGGCTGAAAACTCCTTCAAGACTAGAAGACTTCAAGCTCCAAGAATCCATTGA

mRNA sequence

ATGTCGTTCAAGACTTCTTCAATGGTCGCTGTCATGAACAAGTCTTACATGGGTTCTACTGCCCATTGTTGCTTCAATAAACTGGCGTTGCAAGAAGATAAAGCTTCTATCGTTGCAGGCCAAGAAACAACCTTGCAAGGGGCATATACTAATGACAAGTTTATTGTTAAGTATAACCCTTTGTTTGAACATGATTCTGATGTAGTGACTGTCATGATGACTGGGACTAGAACTATGGAAGAAAGAATGGTTGAGATGCAGGAGCACATCGACACCTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGCGCAACTGAAGTGCCAAATTGAGAACCAACATATCGCCGAATCAAATCAAACCCAAGTCATAAAAAATCATGACAAAGGAAAGACTATAGTGCAAGATGATCAGCCACAGTGTTCTACTTCGATCGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTGTATCAGAGCTCAGTACGGTGGACCTACTCAAGATTCCCTCTTGTATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAATTCCAATCGGGTATCAGCCACCGAAATTTCAGCAGTTTGATGGAAAAGGCAATCCTAAACAACATATTGCCCACTTCGTTGAGACATGCGAGAACGCTGGTACTCGAGGGGACCTACTAGTCAAACAGTTCGTTCGAACACTTAAAGGAAATGCTTTTGACTGGTACACTGATCTAGAACCTGAGTCAGTAGACAGTTGGGAGGAACTCGAAAGAGAGTTTTTGAATCGCTTCTACAGCACTAGACGAACCGTTAGCATGTTCGAGCTCACAAACACTAAACAACGAAAAGGTGAACTCGTTGTTAACTATATAAATCGCTGGAGAGCTATGAGTCTAGATTGCAAAGATCGCCTCACTGAACTCTCTTCCGTTGAGATGTGCATTCAAGGCATGCACTGGGAACTCCTCTACATCCTTAAAGGTATAAAGCCTCGCACCTTTGAGGAACTAGCAACTCGTGCCCACGATATGGAGCTAAGTATTGCTAGTCGAGAAAACCAAGACCTTCTCCTCCCTAATATGAGAAAAGAAGGAAGGAACGACGAAGAGACTATAGAAGAATCTATGGTTGTCAACACAACCCTTCCCAAGTCGTCTTCGAAAGGAAAGCGACAAACAAATGGAGCGCATCACTTAACTTTAAAGGAAAGACAGAAGAAAATCTATCCTTTCCCTGATGCCGACATCCCTGATATGTTGGAACAACTATTGGAAGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCCCAAGTATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAGGATGTTTCGTCCTAAAGGACTTAATTTTAAAGCTGGCTAAGGAAGGCAAAATTGAGCTTGACCTTGATGAAGTAGCCCAATCAAATCTTGCTACAATCAAAGGAAAGAGCAAACATCAAAGAAAGAAGGATCCTAAGAAACTTCAACCCAAGAGGAAGAGAAGTAAAAAGTTTTCTCAACCTCAACAACTGGTGATGTTGAATAAATCGTTCTCCAAAAATTTCCACAAAAAGGAAAAAAAGAACCTTGCAACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAGAGTGAACAAAGGACTTCCGTCTTTGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGGCTGCGACAGAGGAAGAAAATCAATGTTTGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAAATTGGAGGTAAAACCTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAGGAAGTTATCTGTTCTCATAAATACAGAAGGTTCCTTGAAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACAACTGCTACGTTGTTCCTCCTCCAAGTGCGAATGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTTTCACGCCCTCCGTTGTAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACACACTTCGCTCCAGTTCCTTCTCCCAAATTCGAAGGTTCTCATGCGCTTCGCGCTGCAGTTCCTTCCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCTTTCCCCCAAGTTCGAAGGTTCTCAGGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCACTTCGCTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCGGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGCACTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCAAACGCTTCGCTGTCGTTCCTTCCTTACAGTTCGTAGGTTCTCACACGCTTCGTTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCGCTCACGCGTTTCACTGCAGTTCCTTCCTCCAATTTTGAAGGTTCTCACATCGCTTCGCTTCGCTCACGCGCTTCGCTGCGATCCTTCCCCCAAGTTCAAAGGTTCTCACGGGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATTGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCATCGCCATAGTTCCTTCCTCCGCGCATCGCCATAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACACGCTTCGCCACAGTTCCTTCCTCCCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCAAAGGTTCTCTCGCCACAGTTCCTTCCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTTCGCCACAGTTCCTTCATCCAAGTTCGAAGGTTCTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCATCGCCATAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCCACAGTTCACGCGCACTTCCTCCAAGTTCGAAGGATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTGTTCTCACGTGCATCGCGCGACAGTTCCTTCCTCCAAGTTCGCGCTTCGCCACAGTTCACGCGCACTTCCTCCAAGTTCGAAGGATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTGTTTTCCTCCAAGTTCGAAGGTTGTTCTCACGTGCATCGCGCGACAGTTCCTTCCTCCAAGTTCGAAGGTTGTTCTCACGTGCATCGCCTCCTCCAAGTTTGAAAGAAATTCTACACTCTCACAAAGACAAGAGTTCAGAGTTTCAAAGCTCTCAAGCAGAACCAAAGAATTCAGAGAGACTCCACCAAGTCTGAAGACCGAAAACTCTCTGCAATCCATAAGTTCAAGTGTTGAACACTTCTTGAAGACCAAACACTCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAACATTTCTTGAAGACCCAACACTCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAACATTTCTTGAAGACCCAACACTCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAACACTTCTTGAAGGCTGAAAACTCCTTCAAGACTAGAAGACTTCAAGCTCCAAGAATCCATTGA

Coding sequence (CDS)

ATGTCGTTCAAGACTTCTTCAATGGTCGCTGTCATGAACAAGTCTTACATGGGTTCTACTGCCCATTGTTGCTTCAATAAACTGGCGTTGCAAGAAGATAAAGCTTCTATCGTTGCAGGCCAAGAAACAACCTTGCAAGGGGCATATACTAATGACAAGTTTATTGTTAAGTATAACCCTTTGTTTGAACATGATTCTGATGTAGTGACTGTCATGATGACTGGGACTAGAACTATGGAAGAAAGAATGGTTGAGATGCAGGAGCACATCGACACCTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGCGCAACTGAAGTGCCAAATTGAGAACCAACATATCGCCGAATCAAATCAAACCCAAGTCATAAAAAATCATGACAAAGGAAAGACTATAGTGCAAGATGATCAGCCACAGTGTTCTACTTCGATCGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTGTATCAGAGCTCAGTACGGTGGACCTACTCAAGATTCCCTCTTGTATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAATTCCAATCGGGTATCAGCCACCGAAATTTCAGCAGTTTGATGGAAAAGGCAATCCTAAACAACATATTGCCCACTTCGTTGAGACATGCGAGAACGCTGGTACTCGAGGGGACCTACTAGTCAAACAGTTCGTTCGAACACTTAAAGGAAATGCTTTTGACTGGTACACTGATCTAGAACCTGAGTCAGTAGACAGTTGGGAGGAACTCGAAAGAGAGTTTTTGAATCGCTTCTACAGCACTAGACGAACCGTTAGCATGTTCGAGCTCACAAACACTAAACAACGAAAAGGTGAACTCGTTGTTAACTATATAAATCGCTGGAGAGCTATGAGTCTAGATTGCAAAGATCGCCTCACTGAACTCTCTTCCGTTGAGATGTGCATTCAAGGCATGCACTGGGAACTCCTCTACATCCTTAAAGGTATAAAGCCTCGCACCTTTGAGGAACTAGCAACTCGTGCCCACGATATGGAGCTAAGTATTGCTAGTCGAGAAAACCAAGACCTTCTCCTCCCTAATATGAGAAAAGAAGGAAGGAACGACGAAGAGACTATAGAAGAATCTATGGTTGTCAACACAACCCTTCCCAAGTCGTCTTCGAAAGGAAAGCGACAAACAAATGGAGCGCATCACTTAACTTTAAAGGAAAGACAGAAGAAAATCTATCCTTTCCCTGATGCCGACATCCCTGATATGTTGGAACAACTATTGGAAGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCCCAAGTATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAGGATGTTTCGTCCTAAAGGACTTAATTTTAAAGCTGGCTAAGGAAGGCAAAATTGAGCTTGACCTTGATGAAGTAGCCCAATCAAATCTTGCTACAATCAAAGGAAAGAGCAAACATCAAAGAAAGAAGGATCCTAAGAAACTTCAACCCAAGAGGAAGAGAAGTAAAAAGTTTTCTCAACCTCAACAACTGGTGATGTTGAATAAATCGTTCTCCAAAAATTTCCACAAAAAGGAAAAAAAGAACCTTGCAACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAGAGTGAACAAAGGACTTCCGTCTTTGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGGCTGCGACAGAGGAAGAAAATCAATGTTTGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAAATTGGAGGTAAAACCTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAGGAAGTTATCTGTTCTCATAAATACAGAAGGTTCCTTGAAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACAACTGCTACGTTGTTCCTCCTCCAAGTGCGAATGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTTTCACGCCCTCCGTTGTAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACACACTTCGCTCCAGTTCCTTCTCCCAAATTCGAAGGTTCTCATGCGCTTCGCGCTGCAGTTCCTTCCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCTTTCCCCCAAGTTCGAAGGTTCTCAGGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCACTTCGCTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCGGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGCACTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCAAACGCTTCGCTGTCGTTCCTTCCTTACAGTTCGTAGGTTCTCACACGCTTCGTTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCGCTCACGCGTTTCACTGCAGTTCCTTCCTCCAATTTTGAAGGTTCTCACATCGCTTCGCTTCGCTCACGCGCTTCGCTGCGATCCTTCCCCCAAGTTCAAAGGTTCTCACGGGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATTGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCATCGCCATAGTTCCTTCCTCCGCGCATCGCCATAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACACGCTTCGCCACAGTTCCTTCCTCCCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCAAAGGTTCTCTCGCCACAGTTCCTTCCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTTCGCCACAGTTCCTTCATCCAAGTTCGAAGGTTCTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCATCGCCATAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCCACAGTTCACGCGCACTTCCTCCAAGTTCGAAGGATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTGTTCTCACGTGCATCGCGCGACAGTTCCTTCCTCCAAGTTCGCGCTTCGCCACAGTTCACGCGCACTTCCTCCAAGTTCGAAGGATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTGTTTTCCTCCAAGTTCGAAGGTTGTTCTCACGTGCATCGCGCGACAGTTCCTTCCTCCAAGTTCGAAGGTTGTTCTCACGTGCATCGCCTCCTCCAAGTTTGAAAGAAATTCTACACTCTCACAAAGACAAGAGTTCAGAGTTTCAAAGCTCTCAAGCAGAACCAAAGAATTCAGAGAGACTCCACCAAGTCTGAAGACCGAAAACTCTCTGCAATCCATAAGTTCAAGTGTTGAACACTTCTTGAAGACCAAACACTCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAACATTTCTTGAAGACCCAACACTCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAACATTTCTTGAAGACCCAACACTCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAACACTTCTTGAAGGCTGAAAACTCCTTCAAGACTAGAAGACTTCAAGCTCCAAGAATCCATTGA

Protein sequence

MSFKTSSMVAVMNKSYMGSTAHCCFNKLALQEDKASIVAGQETTLQGAYTNDKFIVKYNPLFEHDSDVVTVMMTGTRTMEERMVEMQEHIDTLMKAIEEKDSQIAQLKCQIENQHIAESNQTQVIKNHDKGKTIVQDDQPQCSTSIASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNLRIPIGYQPPKFQQFDGKGNPKQHIAHFVETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESVDSWEELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEETIEESMVVNTTLPKSSSKGKRQTNGAHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVEGCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKKNLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDKLEVKPFDEVNSDKKLQSSIPSRMKRKLSVLINTEGSLKFLLSKFEGPYTVRYCVVPSPSSKVLRCILLRCSFSKFEGSQLYNCYVVPPPSANDLMWCVVALFPLLSSSMVLTQLCWSFFSPSSKVFTPSVVVPSFQGRRFSLAALQFFLPKFEGSHTSLQFLLPNSKVLMRFALQFLPSKFEGSHIASLRSFLQVRRFSRASLCNSFPQVRRFSGASCSSFLQIRRFSRTSLHFLPPKFEGSHALRCGSFPPSSKVLTHFAAVPSSKFEGSQTLRCRSFLTVRRFSHASLQFLPPKFEGSHVASLRSRVSLQFLPPILKVLTSLRFAHALRCDPSPKFKGSHGHRHSSFLQVRRFSRASPQFLPPSSKVLTRIATVPSSKFEGSLTRIAIVPSSAHRHSSFLQVRRFSHTLRHSSFLPRASPQFLPPSSKVLSPQFLPPSSKVLSPQFLPPSSKVLSPQFLPPSSKVLSPQFLPSKFEGSLATVPSSKFEGSLATVPSSKFEGSLATVPSSKFEGSLTRFATVPSSKFEGSLTRFATVPSSKFEGSLTRFATVPSSKFEGSLTRIAIVPSSKFEGSHALRHSSRALPPSSKDRHSSFLQVRRLFSRASPQFLPPSSKVVLTCIARQFLPPSSRFATVHAHFLQVRRIATVPSSKFEGCFPPSSKVVLTCIARQFLPPSSKVVLTCIASSKFERNSTLSQRQEFRVSKLSSRTKEFRETPPSLKTENSLQSISSSVEHFLKTKHSSRLQHSLKIKDSSGHQHFLKTQHSSRLQHSLKIKDSSGHQHFLKTQHSSRLQHSLKIKDSSGHQHFLKAENSFKTRRLQAPRIH
Homology
BLAST of Lag0019130 vs. NCBI nr
Match: KAA0056121.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 711.1 bits (1834), Expect = 2.0e-200
Identity = 396/667 (59.37%), Postives = 488/667 (73.16%), Query Frame = 0

Query: 34  KASIVAGQETTLQGAYTNDKFIVKYNPLFEHDSDVVTVMMTGTRTMEERMVEMQEHIDTL 93
           K  IV  +   +   Y++ K   +  P      ++++VM+T   T E RM E+++ ++ L
Sbjct: 51  KGGIVIKENHAIDEHYSSSKPSSEEMP----HPNIMSVMVTNVDTSENRMAELEKKVNML 110

Query: 94  MKAIEEKDSQIAQLKCQIENQHIAESNQTQVIKNHDKGKTIVQDDQPQCSTSIASLSIQQ 153
           MK +EE+D +IA LK  IE++  AES+    +KN DKGK ++Q+ QPQ STSIASLS+QQ
Sbjct: 111 MKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQ 170

Query: 154 LQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNLRIPIGYQPPKFQQFDGKGNPKQHIAH 213
           LQ+MI + I+ QYGGP Q   LY KPYTKRIDNLR+P GYQPPKFQQFDGKGNPKQH+AH
Sbjct: 171 LQEMIASSIKMQYGGPAQTFSLYFKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPKQHVAH 230

Query: 214 FVETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESVDSWEELEREFLNRFYSTRRTV 273
           F++TCE AGTRGDLLVKQFVRTLKGNA DWY DLEPES+D+WE+LER+FLNRFYSTR  V
Sbjct: 231 FIKTCETAGTRGDLLVKQFVRTLKGNACDWYIDLEPESIDNWEQLERDFLNRFYSTRHIV 290

Query: 274 SMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKP 333
           SM ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKP
Sbjct: 291 SMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKP 350

Query: 334 RTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTTLPK 393
           RTFEELATRAHDMELSIA+R  +D L+P  R +    ++T       I+ESMVV+ T  K
Sbjct: 351 RTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLK 410

Query: 394 SSSKGK-----RQTNG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRP 453
           S SK K     R+ +G      TLKERQ+K+YPFPD+D+ DMLEQLLE QLI+LP+CKRP
Sbjct: 411 SFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRP 470

Query: 454 EEMEKVDDPKYCKYHRVIGHPVEGCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGKS 513
           E+  KVDDP YCKYHRVI HPVE CFVLK+LILKLA+E KIELD+DEVAQ+N A I+  S
Sbjct: 471 EQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHA-IEMTS 530

Query: 514 KHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKNFHKKEKKNLATSYCI 573
              + KD   LQ +R         RS     P++++ +    + +  + +  N  +S   
Sbjct: 531 NPIKGKDEDFLQLRRSITLAEFLPRSFLEDDPEEILEVTACHAASIVEVD-NNYGSS--- 590

Query: 574 DVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCLMSTSTRPSAFQRLS 633
             +EV+NS +  QRTSVFDRIKP TTR SVFQR+S+A  EEENQC     TR S  +RLS
Sbjct: 591 --KEVNNSNEINQRTSVFDRIKPSTTRSSVFQRLSVATKEEENQCPTFIYTRTSTSKRLS 650

Query: 634 VSTSKKSRPSTSVFDRLKVTSDQPKRKMDKLEVKPFDEVNSDKKLQSSIPSRMKRKLSVL 679
           +ST KK RPSTS FDRLK+T+DQ +R+M   + KPF E N D K+ S +PSRMKRKL V 
Sbjct: 651 ISTLKKDRPSTSSFDRLKMTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVD 706

BLAST of Lag0019130 vs. NCBI nr
Match: TYK03695.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 696.8 bits (1797), Expect = 4.0e-196
Identity = 411/791 (51.96%), Postives = 509/791 (64.35%), Query Frame = 0

Query: 15  SYMGS--TAHCCFNKLALQEDKASIVAGQETTLQ-GAYTNDKFIVKYNP-LFEHDS---- 74
           SY+G     H C  ++   ED       +    Q         ++K NP + EH+S    
Sbjct: 12  SYIGKRPNTHSCSREIQSFEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSEC 71

Query: 75  --------DVVTVMMTGTRTMEERMVEMQEHIDTLMKAIEEKDSQIAQLKCQIENQHIAE 134
                   ++++VM+T   T E RM E+++ ++ LMK +EE+D +IA LK  IE++  AE
Sbjct: 72  SNEEVPQPNIMSVMVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAE 131

Query: 135 SNQTQVIKNHDKGKTIVQDDQPQCSTSIASLSIQQLQDMITNCIRAQYGGPTQDSLLYSK 194
           S+    +KN DKGK ++Q+ QPQ STSIASLS+QQLQ+MI + I+ QYGGP Q   LYSK
Sbjct: 132 SSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSK 191

Query: 195 PYTKRIDNLRIPIGYQPPKFQQFDGKGNPKQHIAHFVETCENAGTRGDLLVKQFVRTLKG 254
           PYTKRIDNLR+P GYQPPKFQQFDGKGNPKQH+AHF+ETCE AGTRGDLLVKQFVRTLKG
Sbjct: 192 PYTKRIDNLRMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKG 251

Query: 255 NAFDWYTDLEPESVDSWEELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVNYINRWRA 314
           NAFD Y DLEPES+D+WE+LER+FLNRFYSTRR VSM ELTNT+Q+KGELV++YINRWRA
Sbjct: 252 NAFDLYMDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRA 311

Query: 315 MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDL 374
           +SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSI +R  +D 
Sbjct: 312 LSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIPNRGAKDF 371

Query: 375 LLPNMRKEGRNDEET-------IEESMVVNTTLPKSSSKGK-----RQTNG--AHHLTLK 434
           L+P  R +     +T       I+ESMVV+ T  KS SK K     R+ +G      TLK
Sbjct: 372 LIPKSRSDKNELNDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLK 431

Query: 435 ERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVEGC 494
           ERQ+K+YPF D+D+ DMLEQLLE QLI+LPKCKRP++ EKVDDP YCKYHRVI HPVE C
Sbjct: 432 ERQEKVYPFSDSDVADMLEQLLENQLIQLPKCKRPKQAEKVDDPNYCKYHRVISHPVEKC 491

Query: 495 FVLKDLILKLAKEGKIELDLDEVAQSN--------------------------------- 554
           FVLK+LILKLA+E KIEL++DEVAQ+N                                 
Sbjct: 492 FVLKELILKLAREKKIELNIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSILFQ 551

Query: 555 --LATIKGKSKHQRKKD---------------PKKLQ-----------------PKRKRS 614
             + TI  ++K    KD               P  +Q                  K +R+
Sbjct: 552 QRIVTINSQNKEAHGKDDDEGWITVTRQKGRQPNSIQKESQFHQKYAKGSISHKKKGRRN 611

Query: 615 KK-------------FSQPQQLVMLNKSFSKNF---HKKEKKNLATSYCIDVEEVDNSKK 674
           KK             F Q ++ + L +   ++F   H +E   + T +   + EV+N+  
Sbjct: 612 KKMWNPKPIKGKDEDFLQLRRSITLAEFLPRSFLEDHPEEILEVTTCHAASIVEVNNNYG 671

Query: 675 S----------EQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCLMSTSTRPSAFQRLS 683
           S           QRTSVFDRIKP TTR SVFQR+SMA  EEENQC     TR S F+RLS
Sbjct: 672 SSKEVNNLNEINQRTSVFDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSTFKRLS 731

BLAST of Lag0019130 vs. NCBI nr
Match: KAA0032121.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 631.3 bits (1627), Expect = 2.0e-176
Identity = 383/739 (51.83%), Postives = 486/739 (65.76%), Query Frame = 0

Query: 4   KTSSMVAVMNKSYMGSTAHCCFNKLALQEDKASIVAGQETTLQGAYTNDK--FIVKYNPL 63
           K +S  + ++ SY+G        K ++QE +   V  ++ +L+    + K   +++ NPL
Sbjct: 5   KAASKSSAVSDSYIGLVTQSHL-KRSMQEQEQGFVL-KKKSLEQLIESPKGGIVIRDNPL 64

Query: 64  FEHDS------------DVVTVMMTGTRTMEERMVEMQEHIDTLMKAIEEKDSQIAQLKC 123
           F + +            +VV+VMM    T E  M EM+  I+ LMK +EE+D +IA LK 
Sbjct: 65  FNNSTPASNLSDKESHLEVVSVMMVDV-TAEATMAEMERKINFLMKVVEERDHEIAALKD 124

Query: 124 QIENQHIAESNQTQVIKNHDKGKTIVQDDQP-QCSTSIASLSIQQLQDMITNCIRAQYGG 183
           Q++    +ES+QT V+K  DKGK +V+++QP Q S S+ASLS+QQLQDMI N IRAQYGG
Sbjct: 125 QMKACETSESSQTPVVKATDKGKNVVEENQPQQQSVSVASLSVQQLQDMIANSIRAQYGG 184

Query: 184 PTQDSLLYSKPYTKRIDNLRIPIGYQPPKFQQFDGKGNPKQHIAHFVETCENAGTRGDLL 243
           P Q S +YSKPYTKRIDNLR+P+GYQP KFQQFDGKGNPKQHI HFVETCENAG+RGD L
Sbjct: 185 PPQTSFMYSKPYTKRIDNLRMPLGYQPLKFQQFDGKGNPKQHIVHFVETCENAGSRGDQL 244

Query: 244 VKQFVRTLKGNAFDWYTDLEPESVDSWEELEREFLNRFYSTRRTVSMFELTNTKQRKGEL 303
           V+QFVR+LKGNAF+                          TRR VSM ELTNT QRKGE 
Sbjct: 245 VRQFVRSLKGNAFE-------------------------CTRRVVSMMELTNT-QRKGEP 304

Query: 304 VVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMEL 363
           V++YINRWRA+SLDCKD+LTELS+VEMC QGMHWELLYIL+GIKPRTFEELATRAHDM+L
Sbjct: 305 VIDYINRWRALSLDCKDKLTELSAVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMKL 364

Query: 364 SIASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTTLPKSSSKGKRQTNGAHH- 423
           SIA+R  +D L+   R +     +T       + ESM+V  T  KS SK K   +  +H 
Sbjct: 365 SIANRGVKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQETPLKSFSKRKETKHKRNHD 424

Query: 424 ------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYH 483
                  TL+ERQKK+YPFPD+D+ DMLEQL+E QLI+LP+CKRPE++ KVDDP YCKYH
Sbjct: 425 GDEKRRPTLRERQKKVYPFPDSDVADMLEQLIEKQLIQLPECKRPEQVGKVDDPNYCKYH 484

Query: 484 RVIGHPVEGCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGKSK--------HQRKK- 543
           RVI H VE CFVLK+LI KLA+E KIELD+DEVAQ+N   +   S          QRK  
Sbjct: 485 RVISHLVEKCFVLKELIRKLARENKIELDIDEVAQTNHVAVNMTSSVPLSILLYDQRKSL 544

Query: 544 ------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKNFHKKEKKNLATSY 603
                 +P  ++ ++K     SQ ++          +  L +SF ++ H +E   +   +
Sbjct: 545 IQFGTFEPILVRFQQKTMTSNSQNKEEPSEDEGEEWIEFLPRSFLED-HPEEILEVTACH 604

Query: 604 CIDV----------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCLMS 663
              +          EE+DNS + +QRTSVFD IKP TTR SVFQR+SMA  +EENQC   
Sbjct: 605 TTSIVEVDNNYDSYEEMDNSNEIKQRTSVFDCIKPLTTRSSVFQRLSMATKKEENQCPTF 664

Query: 664 TSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDKLEVKPFDEVNSDKKLQSS 679
           T  + SAF+RLS+S SKK RPST  FDRLK+T+DQ +R+M  L+ KPF E N D K+ S 
Sbjct: 665 TYAQTSAFKRLSISISKKHRPSTYTFDRLKMTNDQQQREMKTLKAKPFQEENDDDKIHSR 713

BLAST of Lag0019130 vs. NCBI nr
Match: KAA0033746.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 617.5 bits (1591), Expect = 3.1e-172
Identity = 384/802 (47.88%), Postives = 479/802 (59.73%), Query Frame = 0

Query: 4   KTSSMVAVMNKSYMGSTAHCCFNKLALQEDKASIVAGQETTLQGAYTNDK--FIVKYNPL 63
           K +S  +  + SY+G        K ++QE +   V  ++ +L+    + K   I++ NPL
Sbjct: 5   KAASKSSTASDSYIGLVTQSHL-KRSMQEQEQGFVL-KKISLEQLIESPKGGIIIRDNPL 64

Query: 64  F------------EHDSDVVTVMMTGTRTMEERMVEMQEHIDTLMKAIEEKDSQIAQLKC 123
           F            E   +VV+VMM    T E  M EM+  I+ LMK  EE+D +IA LK 
Sbjct: 65  FNNSMPASNLSNKESHLEVVSVMMVDV-TAEATMEEMERKINFLMKNFEERDHEIAALKD 124

Query: 124 QIENQHIAESNQTQVIKNHDKGKTIVQDDQP-QCSTSIASLSIQQLQDMITNCIRAQYGG 183
           Q++     ES+QT V+K  DKGK +VQ++QP Q S S+ASLS+QQLQDMI N IRAQYGG
Sbjct: 125 QMKACKTGESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQYGG 184

Query: 184 PTQDSLLYSKPYTKRIDNLRIPIGYQPPKFQQFDGKGNPKQHIAHFVETCENAGTRGDLL 243
           P Q S +YSK YTKRIDNLR+P+GYQPPKFQQFDGKGNPKQHIAHFVETCENAG+RGD L
Sbjct: 185 PPQTSFMYSKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSRGDQL 244

Query: 244 VKQFVRTLKGNAFDWYTDLEPESVDSWEELEREFLNRFYSTRRTVSMFELTNTKQRKGEL 303
           V+QFVR+LKGNAF+WYTDLEPE                                   GE 
Sbjct: 245 VRQFVRSLKGNAFEWYTDLEPE-----------------------------------GEP 304

Query: 304 VVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMEL 363
           V++YINRWRA+SLDCKD+LTELS+VEMC QGMHWELLYIL+GIKPRTFEEL+TRAHDMEL
Sbjct: 305 VIDYINRWRALSLDCKDKLTELSAVEMCTQGMHWELLYILQGIKPRTFEELSTRAHDMEL 364

Query: 364 SIASRENQDLLLPNMRKEGRND--------EETIEESMVVNTTLPKSSSKGKRQTNGAHH 423
           SIA+   +D L+   ++  +N+           + ESM+V  T  KS SK K   +  ++
Sbjct: 365 SIANIGAKDFLVQRTKRSDKNEINDTKKIANNILNESMLVQETPLKSFSKRKETKHERNY 424

Query: 424 -------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKY 483
                   TL+ERQKK+YPFPD+D+ DMLEQL+E QLI+LP+CKRPE+  KVDDP YCKY
Sbjct: 425 DGDEKRRPTLRERQKKVYPFPDSDVADMLEQLIEKQLIQLPECKRPEQAGKVDDPNYCKY 484

Query: 484 HRVIGHPVEGCFVLKDLILKLAKEGKIELDLDEVAQSN---------------------- 543
           HRVI HPVE CFVLK+LILKLA+E KIELD+DEVAQ+N                      
Sbjct: 485 HRVISHPVEKCFVLKELILKLARENKIELDIDEVAQTNHVAVNMTSSVLPSILLYDQRES 544

Query: 544 ------------------------------------------------------------ 603
                                                                       
Sbjct: 545 LIQFGTFEPILVRFQQKTMTSNSQNKEETSEDEGEEWIGVTHKKERQIGSVQTNSNFHQK 604

Query: 604 --LATIKGKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKKNLA--- 663
                I  K K +R K   K +P + + K F QP++ + L +   ++F +   + +    
Sbjct: 605 HSKGNISHKKKGRRNKKMWKPKPIKGKDKDFFQPRRSINLAEFLPRSFLEDHPEKILEVT 664

Query: 664 ---TSYCIDV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQC 679
              T+  ++V       EEVDNS + +QRT VF RIKP T R SVFQR+SMA  EEENQC
Sbjct: 665 ACHTTSIVEVDNNYDSYEEVDNSNEIKQRTFVFHRIKPLTIRSSVFQRLSMAMKEEENQC 724

BLAST of Lag0019130 vs. NCBI nr
Match: XP_031742199.1 (uncharacterized protein LOC105435721 [Cucumis sativus])

HSP 1 Score: 617.1 bits (1590), Expect = 4.0e-172
Identity = 326/523 (62.33%), Postives = 405/523 (77.44%), Query Frame = 0

Query: 2   SFKTSSMVAVMNKSYMGSTAHCCFNKLALQEDKASIVAGQETTLQGAYTNDK--FIVKYN 61
           S K +S  +  + +Y G         +   +D+ S +A  ++ L+    + K   ++K N
Sbjct: 3   SKKAASKSSAASDTYTGPITRSRSKGIIQGQDQGSAIA--QSILKQLMESPKAGIVIKEN 62

Query: 62  PLF-EHDS-----------DVVTVMMTGTRTMEERMVEMQEHIDTLMKAIEEKDSQIAQL 121
           PL+ ++DS           DV++VMM     +E  M EM+  I+ LMK ++E+D +IA L
Sbjct: 63  PLYNDYDSASSRSLKEAHPDVMSVMMADV-AVETAMAEMERKINLLMKVVDERDHEIAAL 122

Query: 122 KCQIENQHIAESNQTQVIKNHDKGKTIVQDDQP-QCSTSIASLSIQQLQDMITNCIRAQY 181
           K Q++ +  AES+QT V+K  DKGK +VQ++QP Q STS+ASLS+QQLQDMITN IRAQY
Sbjct: 123 KEQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITNSIRAQY 182

Query: 182 GGPTQDSLLYSKPYTKRIDNLRIPIGYQPPKFQQFDGKGNPKQHIAHFVETCENAGTRGD 241
           GGP+Q S +YSKPYTKRIDNLR+P+GYQPPKFQQFDGKGNPKQH+AHFVETCENAG+RGD
Sbjct: 183 GGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGD 242

Query: 242 LLVKQFVRTLKGNAFDWYTDLEPESVDSWEELEREFLNRFYSTRRTVSMFELTNTKQRKG 301
            LV+QFVR+LKGNAF+WYTDLEPES++SWE+LE+EFLNRFYSTRRTVSM ELTNTKQRKG
Sbjct: 243 QLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKG 302

Query: 302 ELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDM 361
           E V++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDM
Sbjct: 303 EPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDM 362

Query: 362 ELSIASRENQDLLLPNMRKEGRN-------DEETIEESMVVNTTLPKSSSKGK-----RQ 421
           ELSIASR  +D L+P ++K+ +         + T +ESMVVNTT P   SKGK     ++
Sbjct: 363 ELSIASRGTKDFLVPEVKKDKKEMKGAEKIVKSTSKESMVVNTT-PLKFSKGKEARVEKK 422

Query: 422 TNGA--HHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCK 481
            +G+    LTLKERQ+K+YPFPD+DI DMLEQLLE QLI+LP+CKRPE+  KVDDP YCK
Sbjct: 423 DDGSERRRLTLKERQEKVYPFPDSDIADMLEQLLEKQLIQLPECKRPEQAGKVDDPNYCK 482

Query: 482 YHRVIGHPVEGCFVLKDLILKLAKEGKIELDLDEVAQSNLATI 496
           YHRVI HPVE CFVLK+LIL+LA+E +IELDL+EVAQ+N A +
Sbjct: 483 YHRVISHPVEKCFVLKELILRLAREKRIELDLEEVAQTNHAEV 521

BLAST of Lag0019130 vs. ExPASy TrEMBL
Match: A0A5A7URH1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17350G00010 PE=4 SV=1)

HSP 1 Score: 711.1 bits (1834), Expect = 9.8e-201
Identity = 396/667 (59.37%), Postives = 488/667 (73.16%), Query Frame = 0

Query: 34  KASIVAGQETTLQGAYTNDKFIVKYNPLFEHDSDVVTVMMTGTRTMEERMVEMQEHIDTL 93
           K  IV  +   +   Y++ K   +  P      ++++VM+T   T E RM E+++ ++ L
Sbjct: 51  KGGIVIKENHAIDEHYSSSKPSSEEMP----HPNIMSVMVTNVDTSENRMAELEKKVNML 110

Query: 94  MKAIEEKDSQIAQLKCQIENQHIAESNQTQVIKNHDKGKTIVQDDQPQCSTSIASLSIQQ 153
           MK +EE+D +IA LK  IE++  AES+    +KN DKGK ++Q+ QPQ STSIASLS+QQ
Sbjct: 111 MKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQ 170

Query: 154 LQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNLRIPIGYQPPKFQQFDGKGNPKQHIAH 213
           LQ+MI + I+ QYGGP Q   LY KPYTKRIDNLR+P GYQPPKFQQFDGKGNPKQH+AH
Sbjct: 171 LQEMIASSIKMQYGGPAQTFSLYFKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPKQHVAH 230

Query: 214 FVETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESVDSWEELEREFLNRFYSTRRTV 273
           F++TCE AGTRGDLLVKQFVRTLKGNA DWY DLEPES+D+WE+LER+FLNRFYSTR  V
Sbjct: 231 FIKTCETAGTRGDLLVKQFVRTLKGNACDWYIDLEPESIDNWEQLERDFLNRFYSTRHIV 290

Query: 274 SMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKP 333
           SM ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKP
Sbjct: 291 SMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKP 350

Query: 334 RTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTTLPK 393
           RTFEELATRAHDMELSIA+R  +D L+P  R +    ++T       I+ESMVV+ T  K
Sbjct: 351 RTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLK 410

Query: 394 SSSKGK-----RQTNG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRP 453
           S SK K     R+ +G      TLKERQ+K+YPFPD+D+ DMLEQLLE QLI+LP+CKRP
Sbjct: 411 SFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRP 470

Query: 454 EEMEKVDDPKYCKYHRVIGHPVEGCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGKS 513
           E+  KVDDP YCKYHRVI HPVE CFVLK+LILKLA+E KIELD+DEVAQ+N A I+  S
Sbjct: 471 EQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHA-IEMTS 530

Query: 514 KHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKNFHKKEKKNLATSYCI 573
              + KD   LQ +R         RS     P++++ +    + +  + +  N  +S   
Sbjct: 531 NPIKGKDEDFLQLRRSITLAEFLPRSFLEDDPEEILEVTACHAASIVEVD-NNYGSS--- 590

Query: 574 DVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCLMSTSTRPSAFQRLS 633
             +EV+NS +  QRTSVFDRIKP TTR SVFQR+S+A  EEENQC     TR S  +RLS
Sbjct: 591 --KEVNNSNEINQRTSVFDRIKPSTTRSSVFQRLSVATKEEENQCPTFIYTRTSTSKRLS 650

Query: 634 VSTSKKSRPSTSVFDRLKVTSDQPKRKMDKLEVKPFDEVNSDKKLQSSIPSRMKRKLSVL 679
           +ST KK RPSTS FDRLK+T+DQ +R+M   + KPF E N D K+ S +PSRMKRKL V 
Sbjct: 651 ISTLKKDRPSTSSFDRLKMTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVD 706

BLAST of Lag0019130 vs. ExPASy TrEMBL
Match: A0A5D3BX77 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00570 PE=4 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 1.9e-196
Identity = 411/791 (51.96%), Postives = 509/791 (64.35%), Query Frame = 0

Query: 15  SYMGS--TAHCCFNKLALQEDKASIVAGQETTLQ-GAYTNDKFIVKYNP-LFEHDS---- 74
           SY+G     H C  ++   ED       +    Q         ++K NP + EH+S    
Sbjct: 12  SYIGKRPNTHSCSREIQSFEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSEC 71

Query: 75  --------DVVTVMMTGTRTMEERMVEMQEHIDTLMKAIEEKDSQIAQLKCQIENQHIAE 134
                   ++++VM+T   T E RM E+++ ++ LMK +EE+D +IA LK  IE++  AE
Sbjct: 72  SNEEVPQPNIMSVMVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAE 131

Query: 135 SNQTQVIKNHDKGKTIVQDDQPQCSTSIASLSIQQLQDMITNCIRAQYGGPTQDSLLYSK 194
           S+    +KN DKGK ++Q+ QPQ STSIASLS+QQLQ+MI + I+ QYGGP Q   LYSK
Sbjct: 132 SSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSK 191

Query: 195 PYTKRIDNLRIPIGYQPPKFQQFDGKGNPKQHIAHFVETCENAGTRGDLLVKQFVRTLKG 254
           PYTKRIDNLR+P GYQPPKFQQFDGKGNPKQH+AHF+ETCE AGTRGDLLVKQFVRTLKG
Sbjct: 192 PYTKRIDNLRMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKG 251

Query: 255 NAFDWYTDLEPESVDSWEELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVNYINRWRA 314
           NAFD Y DLEPES+D+WE+LER+FLNRFYSTRR VSM ELTNT+Q+KGELV++YINRWRA
Sbjct: 252 NAFDLYMDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRA 311

Query: 315 MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDL 374
           +SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSI +R  +D 
Sbjct: 312 LSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIPNRGAKDF 371

Query: 375 LLPNMRKEGRNDEET-------IEESMVVNTTLPKSSSKGK-----RQTNG--AHHLTLK 434
           L+P  R +     +T       I+ESMVV+ T  KS SK K     R+ +G      TLK
Sbjct: 372 LIPKSRSDKNELNDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLK 431

Query: 435 ERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVEGC 494
           ERQ+K+YPF D+D+ DMLEQLLE QLI+LPKCKRP++ EKVDDP YCKYHRVI HPVE C
Sbjct: 432 ERQEKVYPFSDSDVADMLEQLLENQLIQLPKCKRPKQAEKVDDPNYCKYHRVISHPVEKC 491

Query: 495 FVLKDLILKLAKEGKIELDLDEVAQSN--------------------------------- 554
           FVLK+LILKLA+E KIEL++DEVAQ+N                                 
Sbjct: 492 FVLKELILKLAREKKIELNIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSILFQ 551

Query: 555 --LATIKGKSKHQRKKD---------------PKKLQ-----------------PKRKRS 614
             + TI  ++K    KD               P  +Q                  K +R+
Sbjct: 552 QRIVTINSQNKEAHGKDDDEGWITVTRQKGRQPNSIQKESQFHQKYAKGSISHKKKGRRN 611

Query: 615 KK-------------FSQPQQLVMLNKSFSKNF---HKKEKKNLATSYCIDVEEVDNSKK 674
           KK             F Q ++ + L +   ++F   H +E   + T +   + EV+N+  
Sbjct: 612 KKMWNPKPIKGKDEDFLQLRRSITLAEFLPRSFLEDHPEEILEVTTCHAASIVEVNNNYG 671

Query: 675 S----------EQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCLMSTSTRPSAFQRLS 683
           S           QRTSVFDRIKP TTR SVFQR+SMA  EEENQC     TR S F+RLS
Sbjct: 672 SSKEVNNLNEINQRTSVFDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSTFKRLS 731

BLAST of Lag0019130 vs. ExPASy TrEMBL
Match: A0A5A7SRE2 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00210 PE=4 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 9.9e-177
Identity = 383/739 (51.83%), Postives = 486/739 (65.76%), Query Frame = 0

Query: 4   KTSSMVAVMNKSYMGSTAHCCFNKLALQEDKASIVAGQETTLQGAYTNDK--FIVKYNPL 63
           K +S  + ++ SY+G        K ++QE +   V  ++ +L+    + K   +++ NPL
Sbjct: 5   KAASKSSAVSDSYIGLVTQSHL-KRSMQEQEQGFVL-KKKSLEQLIESPKGGIVIRDNPL 64

Query: 64  FEHDS------------DVVTVMMTGTRTMEERMVEMQEHIDTLMKAIEEKDSQIAQLKC 123
           F + +            +VV+VMM    T E  M EM+  I+ LMK +EE+D +IA LK 
Sbjct: 65  FNNSTPASNLSDKESHLEVVSVMMVDV-TAEATMAEMERKINFLMKVVEERDHEIAALKD 124

Query: 124 QIENQHIAESNQTQVIKNHDKGKTIVQDDQP-QCSTSIASLSIQQLQDMITNCIRAQYGG 183
           Q++    +ES+QT V+K  DKGK +V+++QP Q S S+ASLS+QQLQDMI N IRAQYGG
Sbjct: 125 QMKACETSESSQTPVVKATDKGKNVVEENQPQQQSVSVASLSVQQLQDMIANSIRAQYGG 184

Query: 184 PTQDSLLYSKPYTKRIDNLRIPIGYQPPKFQQFDGKGNPKQHIAHFVETCENAGTRGDLL 243
           P Q S +YSKPYTKRIDNLR+P+GYQP KFQQFDGKGNPKQHI HFVETCENAG+RGD L
Sbjct: 185 PPQTSFMYSKPYTKRIDNLRMPLGYQPLKFQQFDGKGNPKQHIVHFVETCENAGSRGDQL 244

Query: 244 VKQFVRTLKGNAFDWYTDLEPESVDSWEELEREFLNRFYSTRRTVSMFELTNTKQRKGEL 303
           V+QFVR+LKGNAF+                          TRR VSM ELTNT QRKGE 
Sbjct: 245 VRQFVRSLKGNAFE-------------------------CTRRVVSMMELTNT-QRKGEP 304

Query: 304 VVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMEL 363
           V++YINRWRA+SLDCKD+LTELS+VEMC QGMHWELLYIL+GIKPRTFEELATRAHDM+L
Sbjct: 305 VIDYINRWRALSLDCKDKLTELSAVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMKL 364

Query: 364 SIASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTTLPKSSSKGKRQTNGAHH- 423
           SIA+R  +D L+   R +     +T       + ESM+V  T  KS SK K   +  +H 
Sbjct: 365 SIANRGVKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQETPLKSFSKRKETKHKRNHD 424

Query: 424 ------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYH 483
                  TL+ERQKK+YPFPD+D+ DMLEQL+E QLI+LP+CKRPE++ KVDDP YCKYH
Sbjct: 425 GDEKRRPTLRERQKKVYPFPDSDVADMLEQLIEKQLIQLPECKRPEQVGKVDDPNYCKYH 484

Query: 484 RVIGHPVEGCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGKSK--------HQRKK- 543
           RVI H VE CFVLK+LI KLA+E KIELD+DEVAQ+N   +   S          QRK  
Sbjct: 485 RVISHLVEKCFVLKELIRKLARENKIELDIDEVAQTNHVAVNMTSSVPLSILLYDQRKSL 544

Query: 544 ------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKNFHKKEKKNLATSY 603
                 +P  ++ ++K     SQ ++          +  L +SF ++ H +E   +   +
Sbjct: 545 IQFGTFEPILVRFQQKTMTSNSQNKEEPSEDEGEEWIEFLPRSFLED-HPEEILEVTACH 604

Query: 604 CIDV----------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCLMS 663
              +          EE+DNS + +QRTSVFD IKP TTR SVFQR+SMA  +EENQC   
Sbjct: 605 TTSIVEVDNNYDSYEEMDNSNEIKQRTSVFDCIKPLTTRSSVFQRLSMATKKEENQCPTF 664

Query: 664 TSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDKLEVKPFDEVNSDKKLQSS 679
           T  + SAF+RLS+S SKK RPST  FDRLK+T+DQ +R+M  L+ KPF E N D K+ S 
Sbjct: 665 TYAQTSAFKRLSISISKKHRPSTYTFDRLKMTNDQQQREMKTLKAKPFQEENDDDKIHSR 713

BLAST of Lag0019130 vs. ExPASy TrEMBL
Match: A0A5A7SUW1 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G002250 PE=4 SV=1)

HSP 1 Score: 617.5 bits (1591), Expect = 1.5e-172
Identity = 384/802 (47.88%), Postives = 479/802 (59.73%), Query Frame = 0

Query: 4   KTSSMVAVMNKSYMGSTAHCCFNKLALQEDKASIVAGQETTLQGAYTNDK--FIVKYNPL 63
           K +S  +  + SY+G        K ++QE +   V  ++ +L+    + K   I++ NPL
Sbjct: 5   KAASKSSTASDSYIGLVTQSHL-KRSMQEQEQGFVL-KKISLEQLIESPKGGIIIRDNPL 64

Query: 64  F------------EHDSDVVTVMMTGTRTMEERMVEMQEHIDTLMKAIEEKDSQIAQLKC 123
           F            E   +VV+VMM    T E  M EM+  I+ LMK  EE+D +IA LK 
Sbjct: 65  FNNSMPASNLSNKESHLEVVSVMMVDV-TAEATMEEMERKINFLMKNFEERDHEIAALKD 124

Query: 124 QIENQHIAESNQTQVIKNHDKGKTIVQDDQP-QCSTSIASLSIQQLQDMITNCIRAQYGG 183
           Q++     ES+QT V+K  DKGK +VQ++QP Q S S+ASLS+QQLQDMI N IRAQYGG
Sbjct: 125 QMKACKTGESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQYGG 184

Query: 184 PTQDSLLYSKPYTKRIDNLRIPIGYQPPKFQQFDGKGNPKQHIAHFVETCENAGTRGDLL 243
           P Q S +YSK YTKRIDNLR+P+GYQPPKFQQFDGKGNPKQHIAHFVETCENAG+RGD L
Sbjct: 185 PPQTSFMYSKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSRGDQL 244

Query: 244 VKQFVRTLKGNAFDWYTDLEPESVDSWEELEREFLNRFYSTRRTVSMFELTNTKQRKGEL 303
           V+QFVR+LKGNAF+WYTDLEPE                                   GE 
Sbjct: 245 VRQFVRSLKGNAFEWYTDLEPE-----------------------------------GEP 304

Query: 304 VVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMEL 363
           V++YINRWRA+SLDCKD+LTELS+VEMC QGMHWELLYIL+GIKPRTFEEL+TRAHDMEL
Sbjct: 305 VIDYINRWRALSLDCKDKLTELSAVEMCTQGMHWELLYILQGIKPRTFEELSTRAHDMEL 364

Query: 364 SIASRENQDLLLPNMRKEGRND--------EETIEESMVVNTTLPKSSSKGKRQTNGAHH 423
           SIA+   +D L+   ++  +N+           + ESM+V  T  KS SK K   +  ++
Sbjct: 365 SIANIGAKDFLVQRTKRSDKNEINDTKKIANNILNESMLVQETPLKSFSKRKETKHERNY 424

Query: 424 -------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKY 483
                   TL+ERQKK+YPFPD+D+ DMLEQL+E QLI+LP+CKRPE+  KVDDP YCKY
Sbjct: 425 DGDEKRRPTLRERQKKVYPFPDSDVADMLEQLIEKQLIQLPECKRPEQAGKVDDPNYCKY 484

Query: 484 HRVIGHPVEGCFVLKDLILKLAKEGKIELDLDEVAQSN---------------------- 543
           HRVI HPVE CFVLK+LILKLA+E KIELD+DEVAQ+N                      
Sbjct: 485 HRVISHPVEKCFVLKELILKLARENKIELDIDEVAQTNHVAVNMTSSVLPSILLYDQRES 544

Query: 544 ------------------------------------------------------------ 603
                                                                       
Sbjct: 545 LIQFGTFEPILVRFQQKTMTSNSQNKEETSEDEGEEWIGVTHKKERQIGSVQTNSNFHQK 604

Query: 604 --LATIKGKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKKNLA--- 663
                I  K K +R K   K +P + + K F QP++ + L +   ++F +   + +    
Sbjct: 605 HSKGNISHKKKGRRNKKMWKPKPIKGKDKDFFQPRRSINLAEFLPRSFLEDHPEKILEVT 664

Query: 664 ---TSYCIDV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQC 679
              T+  ++V       EEVDNS + +QRT VF RIKP T R SVFQR+SMA  EEENQC
Sbjct: 665 ACHTTSIVEVDNNYDSYEEVDNSNEIKQRTFVFHRIKPLTIRSSVFQRLSMAMKEEENQC 724

BLAST of Lag0019130 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 6.2e-171
Identity = 311/466 (66.74%), Postives = 374/466 (80.26%), Query Frame = 0

Query: 55  IVKYNP-LFEHDS------------DVVTVMMTGTRTMEERMVEMQEHIDTLMKAIEEKD 114
           ++K NP + EH+S            ++++VM+T   T E+RM E+++ ++ LMKA+EE+D
Sbjct: 55  VIKENPAMDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERD 114

Query: 115 SQIAQLKCQIENQHIAESNQTQVIKNHDKGKTIVQDDQPQCSTSIASLSIQQLQDMITNC 174
            +IA LK  IE++  AES+ T  IKN +KGK I+Q+ QPQ STSIASLS+QQLQ+MI N 
Sbjct: 115 FEIALLKNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMIANS 174

Query: 175 IRAQYGGPTQDSLLYSKPYTKRIDNLRIPIGYQPPKFQQFDGKGNPKQHIAHFVETCENA 234
           I+ QYGGP Q   LYSKPYTKRIDN+R+P GYQPPKFQQFDGKGNPKQH+AHF+ETCE A
Sbjct: 175 IKTQYGGPAQTFSLYSKPYTKRIDNMRMPHGYQPPKFQQFDGKGNPKQHVAHFIETCETA 234

Query: 235 GTRGDLLVKQFVRTLKGNAFDWYTDLEPESVDSWEELEREFLNRFYSTRRTVSMFELTNT 294
           GTRGDLLVKQFVRTLKGNAFDWYTDLEPES+DSWE+LER+FLNRFYSTRR VSM ELT T
Sbjct: 235 GTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEQLERDFLNRFYSTRRIVSMIELTAT 294

Query: 295 KQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELAT 354
           KQRKGE V++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELAT
Sbjct: 295 KQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELAT 354

Query: 355 RAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTT----LPKSSSK 414
           RAHDMELSIA+R N DLL+P +RKE +  + T        +E+MVV+TT    + K    
Sbjct: 355 RAHDMELSIANRGNNDLLVPEVRKEKKEVKSTQKALKGVTKEAMVVSTTPLKLVSKEKKM 414

Query: 415 GKRQTNG-AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPK 474
            KRQ  G     TLKERQ+K+YPFPD+D+PDML+QLLE QLI+LP+CKRP EM +V+DP 
Sbjct: 415 EKRQDEGEKRRPTLKERQEKVYPFPDSDLPDMLDQLLEKQLIQLPECKRPAEMGRVNDPN 474

Query: 475 YCKYHRVIGHPVEGCFVLKDLILKLAKEGKIELDLDEVAQSNLATI 496
           YCKYHRVI HPVE CFVLK+LILKLA + KIEL+LD+VAQ+N A +
Sbjct: 475 YCKYHRVISHPVEKCFVLKELILKLALDKKIELELDDVAQTNHAAV 520

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0056121.12.0e-20059.37ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
TYK03695.14.0e-19651.96retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0032121.12.0e-17651.83ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0033746.13.1e-17247.88retrotransposon gag protein [Cucumis melo var. makuwa][more]
XP_031742199.14.0e-17262.33uncharacterized protein LOC105435721 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7URH19.8e-20159.37Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3BX771.9e-19651.96Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5A7SRE29.9e-17751.83Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7SUW11.5e-17247.88Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5A7TZU96.2e-17166.74Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940... [more]

Pages

Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 599..619
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1349..1368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 495..522
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 497..520
NoneNo IPR availablePANTHERPTHR33437OS06G0361200 PROTEINcoord: 82..575
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 232..321
e-value: 2.3E-9
score: 37.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0019130.1Lag0019130.1mRNA