Lag0019091 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0019091
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr5: 38523127 .. 38524395 (-)
RNA-Seq ExpressionLag0019091
SyntenyLag0019091
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGAGTGTGGAAATTCTGCAGAGGGATAACTATTGATAATGTTGGGGACAACCTTTTCCTTATTAATCCTCAATCAGAACTGGGCAGGGACAAAATCTTGGATGAGGGTCCGTGGTGTTTTGATGATCATTTGATCCTCCTGAAACCTCCAACAACATTCGATTTACCAGAAGATATGGTATTTGAGGAAGCCAATTTTTGGGTTCAATTCCATCACTTACCGTTGGGACTAAGGAACGAGACGGTGGCTCAAACTCTTGGAAGTCGGTTAGGGACAATCCAGAGAGTTGATACTAATGAAACGGATGAATGCTGGGGTCGTTTCCTTCGAGTACGGGTTAAGATGAAGATTAATGAACCTCTATGTCGAAGCCTAACTCTAAATGGTGGACCAACCGGAAAAATATTGACAGTGATTAAGTACGAGCGTTTACCGGACTTTTGCTACTATTGTGGGATGCTTGACCACAATGACGGATCGTGTCCACATCTCAAAGTTCAATCAAAGCCGGAGAAACAATTTGGTTCGTGGATGCGAGCTGCAACTCCTCCGAGACGGAACCGTTTTCACACAAACGACAGGGGATATGAAGGACTTAGAGGGGGGAGAGGACGATTTGGACAACGACAAAGATGGAGGCAACCATGGCGATCTAATGCGGAGAAAGAGGAAGCCAACAATGGAGATTCAGGGGATCTTAAAAAATCCGACGAAAGCGATGATGAACGGCAACCTAAACACCATCTCCGGCCGCCTACTGCACCCGATTCCGGTGACACTTCCCTGCAATCAATGCCATCGACGAAAATTACGGGTAATAAATGTTCTTTTTCCTTTGATAACGCCACTAGTATGGTTTCCCTCCCTGTGCCTGCAGATGGCGTGATTCACGGCAAGGAGAAAGGAGAAATAAATGGCCTCACCGAAAAATCAGGAGAAGAAACGGTACATTTAAAGCGTACAGGAGAAAACCAGGGAGAAATATGGGGAAGAAACGACGTGGAGGGAAAGTTAGGGCAAGGAGGATCGGTGGGGAAAATTAAGTTTGGTGGGGCCAATCCTAATATTACCAACCAAACGACCCAACCAGTCCAAAAAATGAGCAAGCCCAGCCATCCAAACACCCAAAATAATACAACCCAGCCTATGGAAGCTGATCAAGACTCAAACTCCATTTTAAGACCAACAATAGGTGACCCAACTAATGATGCTCCAACATTAGGCCTGAAACCAGAAATTTTATTGGGGAATTGTGGTAAATGA

mRNA sequence

ATGAAAGGAGTGTGGAAATTCTGCAGAGGGATAACTATTGATAATGTTGGGGACAACCTTTTCCTTATTAATCCTCAATCAGAACTGGGCAGGGACAAAATCTTGGATGAGGGTCCGTGGTGTTTTGATGATCATTTGATCCTCCTGAAACCTCCAACAACATTCGATTTACCAGAAGATATGGTATTTGAGGAAGCCAATTTTTGGGTTCAATTCCATCACTTACCGTTGGGACTAAGGAACGAGACGGTGGCTCAAACTCTTGGAAGTCGGTTAGGGACAATCCAGAGAGTTGATACTAATGAAACGGATGAATGCTGGGGTCGTTTCCTTCGAGTACGGGTTAAGATGAAGATTAATGAACCTCTATGTCGAAGCCTAACTCTAAATGGTGGACCAACCGGAAAAATATTGACAGTGATTAAGTACGAGCGTTTACCGGACTTTTGCTACTATTGTGGGATGCTTGACCACAATGACGGATCGTGTCCACATCTCAAAGTTCAATCAAAGCCGGAGAAACAATTTGGTTCGTGGATGCGAGCTGCAACTCCTCCGAGACGGAACCGTTTTCACACAAACGACAGGGGATATGAAGGACTTAGAGGGGGGAGAGGACGATTTGGACAACGACAAAGATGGAGGCAACCATGGCGATCTAATGCGGAGAAAGAGGAAGCCAACAATGGAGATTCAGGGGATCTTAAAAAATCCGACGAAAGCGATGATGAACGGCAACCTAAACACCATCTCCGGCCGCCTACTGCACCCGATTCCGGTGACACTTCCCTGCAATCAATGCCATCGACGAAAATTACGGGTAATAAATGTTCTTTTTCCTTTGATAACGCCACTAGTATGGTTTCCCTCCCTGTGCCTGCAGATGGCGTGATTCACGGCAAGGAGAAAGGAGAAATAAATGGCCTCACCGAAAAATCAGGAGAAGAAACGGTACATTTAAAGCGTACAGGAGAAAACCAGGGAGAAATATGGGGAAGAAACGACGTGGAGGGAAAGTTAGGGCAAGGAGGATCGGTGGGGAAAATTAAGTTTGGTGGGGCCAATCCTAATATTACCAACCAAACGACCCAACCAGTCCAAAAAATGAGCAAGCCCAGCCATCCAAACACCCAAAATAATACAACCCAGCCTATGGAAGCTGATCAAGACTCAAACTCCATTTTAAGACCAACAATAGGTGACCCAACTAATGATGCTCCAACATTAGGCCTGAAACCAGAAATTTTATTGGGGAATTGTGGTAAATGA

Coding sequence (CDS)

ATGAAAGGAGTGTGGAAATTCTGCAGAGGGATAACTATTGATAATGTTGGGGACAACCTTTTCCTTATTAATCCTCAATCAGAACTGGGCAGGGACAAAATCTTGGATGAGGGTCCGTGGTGTTTTGATGATCATTTGATCCTCCTGAAACCTCCAACAACATTCGATTTACCAGAAGATATGGTATTTGAGGAAGCCAATTTTTGGGTTCAATTCCATCACTTACCGTTGGGACTAAGGAACGAGACGGTGGCTCAAACTCTTGGAAGTCGGTTAGGGACAATCCAGAGAGTTGATACTAATGAAACGGATGAATGCTGGGGTCGTTTCCTTCGAGTACGGGTTAAGATGAAGATTAATGAACCTCTATGTCGAAGCCTAACTCTAAATGGTGGACCAACCGGAAAAATATTGACAGTGATTAAGTACGAGCGTTTACCGGACTTTTGCTACTATTGTGGGATGCTTGACCACAATGACGGATCGTGTCCACATCTCAAAGTTCAATCAAAGCCGGAGAAACAATTTGGTTCGTGGATGCGAGCTGCAACTCCTCCGAGACGGAACCGTTTTCACACAAACGACAGGGGATATGAAGGACTTAGAGGGGGGAGAGGACGATTTGGACAACGACAAAGATGGAGGCAACCATGGCGATCTAATGCGGAGAAAGAGGAAGCCAACAATGGAGATTCAGGGGATCTTAAAAAATCCGACGAAAGCGATGATGAACGGCAACCTAAACACCATCTCCGGCCGCCTACTGCACCCGATTCCGGTGACACTTCCCTGCAATCAATGCCATCGACGAAAATTACGGGTAATAAATGTTCTTTTTCCTTTGATAACGCCACTAGTATGGTTTCCCTCCCTGTGCCTGCAGATGGCGTGATTCACGGCAAGGAGAAAGGAGAAATAAATGGCCTCACCGAAAAATCAGGAGAAGAAACGGTACATTTAAAGCGTACAGGAGAAAACCAGGGAGAAATATGGGGAAGAAACGACGTGGAGGGAAAGTTAGGGCAAGGAGGATCGGTGGGGAAAATTAAGTTTGGTGGGGCCAATCCTAATATTACCAACCAAACGACCCAACCAGTCCAAAAAATGAGCAAGCCCAGCCATCCAAACACCCAAAATAATACAACCCAGCCTATGGAAGCTGATCAAGACTCAAACTCCATTTTAAGACCAACAATAGGTGACCCAACTAATGATGCTCCAACATTAGGCCTGAAACCAGAAATTTTATTGGGGAATTGTGGTAAATGA

Protein sequence

MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKVQSKPEKQFGSWMRAATPPRRNRFHTNDRGYEGLRGGRGRFGQRQRWRQPWRSNAEKEEANNGDSGDLKKSDESDDERQPKHHLRPPTAPDSGDTSLQSMPSTKITGNKCSFSFDNATSMVSLPVPADGVIHGKEKGEINGLTEKSGEETVHLKRTGENQGEIWGRNDVEGKLGQGGSVGKIKFGGANPNITNQTTQPVQKMSKPSHPNTQNNTTQPMEADQDSNSILRPTIGDPTNDAPTLGLKPEILLGNCGK
Homology
BLAST of Lag0019091 vs. NCBI nr
Match: XP_023888198.1 (uncharacterized protein LOC112000324 [Quercus suber])

HSP 1 Score: 164.9 bits (416), Expect = 1.6e-36
Identity = 74/199 (37.19%), Postives = 118/199 (59.30%), Query Frame = 0

Query: 1   MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPED 60
           +K +W+  +   + ++  N+ LI   +E+   KIL +GPW FD +LI L  P+  +  +D
Sbjct: 53  LKTMWRSIQNFQVHDLTSNIVLILFSNEVDAKKILSQGPWSFDKYLIGLYKPSESESVDD 112

Query: 61  MVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRFLRVRVKMKIN 120
             F+ A+FWVQ H+LPL   N   A+ +GS LG +++VD + T EC GR +R+RV + I 
Sbjct: 113 AKFDTASFWVQIHNLPLSRMNRANAEIIGSSLGKVEQVDASPTGECRGRCVRIRVALNIE 172

Query: 121 EPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSC----PHLKVQSKPEKQF 180
           +PLCR   ++ G TG +    +YER+P FCY+CG+++H++  C       +   K  +Q+
Sbjct: 173 QPLCRGRFVDMGATGPLWVSFQYERMPVFCYWCGLMNHDEKDCRLWTDSGETLEKESQQY 232

Query: 181 GSWMRA--ATPPRRNRFHT 194
           G W+RA  A P +    HT
Sbjct: 233 GPWLRATMANPQQTQVVHT 251

BLAST of Lag0019091 vs. NCBI nr
Match: XP_023926510.1 (uncharacterized protein LOC112037926 [Quercus suber])

HSP 1 Score: 163.3 bits (412), Expect = 4.5e-36
Identity = 74/199 (37.19%), Postives = 117/199 (58.79%), Query Frame = 0

Query: 1   MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPED 60
           +K +W+  +   + ++  N  LI   +E+   KIL +GPW FD +LI L  P+  +  +D
Sbjct: 53  LKTMWRSIQNFEVRDLTSNTVLILFSNEVDAKKILSQGPWSFDKYLIGLYKPSESESVDD 112

Query: 61  MVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRFLRVRVKMKIN 120
             F+ A+FWVQ H+LPL   N   A+ +GS LG +++VD + T EC GR +R+RV + I 
Sbjct: 113 AKFDTASFWVQIHNLPLSRMNRANAEIIGSSLGKVEQVDASPTGECRGRCVRIRVALNIE 172

Query: 121 EPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSC----PHLKVQSKPEKQF 180
           +PLCR   ++ G TG +    +YER+P FCY+CG+++H++  C       +   K  +Q+
Sbjct: 173 QPLCRGRFVDMGATGPLWVSFQYERMPVFCYWCGLMNHDEKDCQLWTDSGETLEKESQQY 232

Query: 181 GSWMRA--ATPPRRNRFHT 194
           G W+RA  A P +    HT
Sbjct: 233 GPWLRATMANPQQTQVVHT 251

BLAST of Lag0019091 vs. NCBI nr
Match: XP_038716189.1 (uncharacterized protein At4g02000-like [Tripterygium wilfordii])

HSP 1 Score: 162.5 bits (410), Expect = 7.7e-36
Identity = 79/191 (41.36%), Postives = 114/191 (59.69%), Query Frame = 0

Query: 1   MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPED 60
           MK +WK  RG+ I  VG+NL+L++  S+   +K+LD  PW FD H +LLK       P D
Sbjct: 59  MKNIWKPIRGMEISTVGENLYLLHFFSKEDYNKVLDGSPWTFDKHPLLLKEYNGNLRPCD 118

Query: 61  MVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRFLRVRVKMKIN 120
           +VFEE   WV+F +LP  + NE V   LG+ +G I++VD +     WG++LRVR+ + I 
Sbjct: 119 VVFEEMPLWVRFCNLPFKMMNEKVGLQLGAAVGRIEKVDLDRNGCGWGKYLRVRIHIDIT 178

Query: 121 EPLCRSLTLNGGPTGKILTV-IKYERLPDFCYYCGMLDHNDGSCPHLKVQSKPEKQFGSW 180
           +PL R + + G   G  + V ++YERLP+FCY CG L H D  C   +      K +G W
Sbjct: 179 KPLKRVVMVTGEEGGAAIRVGVQYERLPNFCYMCGKLGHVDHDCEVGETDFPEPKPYGDW 238

Query: 181 MRAATPPRRNR 191
           +R ++PPR  R
Sbjct: 239 LR-SSPPRGRR 248

BLAST of Lag0019091 vs. NCBI nr
Match: OMP03234.1 (hypothetical protein COLO4_10561 [Corchorus olitorius])

HSP 1 Score: 161.8 bits (408), Expect = 1.3e-35
Identity = 72/206 (34.95%), Postives = 113/206 (54.85%), Query Frame = 0

Query: 4   VWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVF 63
           VWK   G+ +  +G+ L++   +SE+ ++++  +GPW F+  L++LK    F   E++  
Sbjct: 62  VWKLSGGLQVREIGEKLYIFQFESEVEKERVYQQGPWNFNKALLVLKNYDAFISVEEIKL 121

Query: 64  EEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRFLRVRVKMKINEPL 123
           E   FW+Q H LPLG   E+V + +G   G +  +DT      WG+FLR+R  + +N+PL
Sbjct: 122 EWCAFWIQVHDLPLGFMTESVGKAIGDSFGEVIEIDTCGDKVAWGKFLRIRACLNVNKPL 181

Query: 124 CRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKV----QSKPEKQFGSW 183
            R + L     GKIL   +YE+LPDFCY CG L+H +  C    +      K +K++G W
Sbjct: 182 RRGMILTAPNGGKILVSFRYEKLPDFCYVCGCLNHTENECEKAVIMRRDSGKVKKEYGPW 241

Query: 184 MRAATPPRRNRFHTNDRGYEGLRGGR 206
           +RA   PR N    +  G    R G+
Sbjct: 242 LRAEV-PRSNTLKFDGPGISETRTGK 266

BLAST of Lag0019091 vs. NCBI nr
Match: XP_038708494.1 (uncharacterized protein LOC120003548 [Tripterygium wilfordii])

HSP 1 Score: 160.6 bits (405), Expect = 2.9e-35
Identity = 98/284 (34.51%), Postives = 144/284 (50.70%), Query Frame = 0

Query: 1   MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPED 60
           MK +WK  RG+    VG+NL+L+   S+   +K+LD  PW FD H +LLK       P D
Sbjct: 114 MKNIWKPVRGMEFSTVGENLYLLRFFSKEDYNKVLDGSPWTFDKHPLLLKEYNGNLRPCD 173

Query: 61  MVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRFLRVRVKMKIN 120
           +VFEE   WV+F++LP  + NE V   LG+ +G I++VD +     WG++LRVR+++ I 
Sbjct: 174 VVFEEMPLWVRFYNLPFKMMNEKVGLQLGAAVGRIEKVDLDRNGCGWGKYLRVRIRIDIT 233

Query: 121 EPLCRSLTLNGGPTGKILTV-IKYERLPDFCYYCGMLDHNDGSCPHLKVQSKPEKQFGSW 180
           +PL R + + G   G  + V ++YERLP+FCY CG L H D  C   + +    K +G W
Sbjct: 234 KPLKRVVMVTGEEGGAAIRVGVQYERLPNFCYMCGRLGHVDRDCEVGETEFPEPKPYGDW 293

Query: 181 MRAATPPRRNRFHTNDRGYEGLRGGRGRFGQRQRWRQPWRSNAEKEEANNGDSGDLKKSD 240
           +R++ P  R    ++D           R  QR+          E  ++   D GD K S+
Sbjct: 294 LRSSPPRGRRPTPSSD------PQSISRSSQRE---------TESSDSKTADFGDAKGSE 353

Query: 241 ESDDERQPKHHLRPPTAPDSG-----DTSLQSMPSTKITGNKCS 279
               E Q K    P    D G     + +L    S  IT +K S
Sbjct: 354 NQRGEDQCKSSSSPGDKVDDGHVLGVEKALSHCGSPIITCSKAS 382

BLAST of Lag0019091 vs. ExPASy TrEMBL
Match: A0A1R3K847 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10561 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.4e-36
Identity = 72/206 (34.95%), Postives = 113/206 (54.85%), Query Frame = 0

Query: 4   VWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVF 63
           VWK   G+ +  +G+ L++   +SE+ ++++  +GPW F+  L++LK    F   E++  
Sbjct: 62  VWKLSGGLQVREIGEKLYIFQFESEVEKERVYQQGPWNFNKALLVLKNYDAFISVEEIKL 121

Query: 64  EEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRFLRVRVKMKINEPL 123
           E   FW+Q H LPLG   E+V + +G   G +  +DT      WG+FLR+R  + +N+PL
Sbjct: 122 EWCAFWIQVHDLPLGFMTESVGKAIGDSFGEVIEIDTCGDKVAWGKFLRIRACLNVNKPL 181

Query: 124 CRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKV----QSKPEKQFGSW 183
            R + L     GKIL   +YE+LPDFCY CG L+H +  C    +      K +K++G W
Sbjct: 182 RRGMILTAPNGGKILVSFRYEKLPDFCYVCGCLNHTENECEKAVIMRRDSGKVKKEYGPW 241

Query: 184 MRAATPPRRNRFHTNDRGYEGLRGGR 206
           +RA   PR N    +  G    R G+
Sbjct: 242 LRAEV-PRSNTLKFDGPGISETRTGK 266

BLAST of Lag0019091 vs. ExPASy TrEMBL
Match: A0A1R3GTB5 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23588 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-34
Identity = 86/270 (31.85%), Postives = 136/270 (50.37%), Query Frame = 0

Query: 1   MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPED 60
           M  VWK   G+ +  +G+NLF+   +S+L ++++  + PW F+  L++LK    +D  ED
Sbjct: 59  MHMVWKLAGGLQVREIGENLFIFQFESDLEKERVYQQTPWNFNKALLVLKSYDAYDCVED 118

Query: 61  MVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRFLRVRVKMKIN 120
           +  +  +FW Q H LPLG  NE++ + +G   GT++ +DT      WG+FLR R ++ + 
Sbjct: 119 IKLDGCSFWKQAHDLPLGFMNESIGRVIGESFGTVEEIDTCGDKIAWGKFLRFRARLNVT 178

Query: 121 EPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKVQSKPE----KQF 180
           +PL R + L     GKIL   +YE+LPDFCY CG L H +  C    V  + +    K++
Sbjct: 179 KPLRRGMILTAPNGGKILISFRYEKLPDFCYVCGCLTHVENECEKAVVMRRDKGKIIKEY 238

Query: 181 GSWMRAATPPRRNRFHTNDRGYEGLRGGR----------GRFGQRQRWRQPWRSNAEKEE 240
           G W+RA   PR      +  G    R GR           R G+  + R+       K  
Sbjct: 239 GPWLRAEV-PRSKSVKFDGPGISETRTGREEEKKDSVNKRREGEGCKGRKGQSLLKLKAA 298

Query: 241 ANNGDSGDLKK-----SDESDDERQPKHHL 252
            +N DS D +      S  + ++   KHH+
Sbjct: 299 RDNEDSSDFQDDTDGLSATNKEQVTGKHHV 327

BLAST of Lag0019091 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-33
Identity = 75/184 (40.76%), Postives = 104/184 (56.52%), Query Frame = 0

Query: 1   MKGVWKF-CRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPE 60
           +K  WK  C+  ++D +G N+FL N      R++IL  GPW FD  LI++  P +   P 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 61  DMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRFLRVRVKMKI 120
           DM F   + WV F  L L   N+T+A  LG+ +G  + V++N  + CWG  LRVRV+  +
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 121 NEPLCRSLTLN-GGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKVQSKPEK-QFG 180
            +PL R + LN  GP G     I+YERLPDF Y+CG LDH    C    V S  +  Q+G
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYG 240

Query: 181 SWMR 182
            W+R
Sbjct: 241 PWLR 244

BLAST of Lag0019091 vs. ExPASy TrEMBL
Match: A0A2N9E949 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3389 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.9e-33
Identity = 72/192 (37.50%), Postives = 107/192 (55.73%), Query Frame = 0

Query: 1   MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPED 60
           M   W+  +G  + ++GDNLF+      + RD +L  GPW FD +L+LLK        + 
Sbjct: 1   MMSRWRPSQGAQMKDIGDNLFIAIFNDAMDRDLVLMNGPWAFDKNLVLLKLFDGDQKVQG 60

Query: 61  MVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRFLRVRVKMKIN 120
           M   EA+FW+Q H LP    NE  A ++G+ LG ++ +D  E    WG F+RV+V++ ++
Sbjct: 61  MQLTEASFWIQIHELPFKGMNEETATSVGNALGVLEEIDIPEDGITWGEFMRVQVRIDVS 120

Query: 121 EPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSC----PHLKVQSKPEKQF 180
            PL R   +  G    I   +KYE+LP FCY CG+L H++  C     H K +     ++
Sbjct: 121 MPLLRRQRVKLGKEESIWVTLKYEKLPTFCYNCGILGHSERECRLVTQHEKSKDGNHYEY 180

Query: 181 GSWMRAATPPRR 189
           GSW+R ATP RR
Sbjct: 181 GSWLR-ATPGRR 191

BLAST of Lag0019091 vs. ExPASy TrEMBL
Match: A0A2N9F689 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10176 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 8.6e-33
Identity = 69/191 (36.13%), Postives = 106/191 (55.50%), Query Frame = 0

Query: 1   MKGVWK--FCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLP 60
           M  +WK    RG+   ++GDNLFL     +  ++ +L   PWCFD  L++LK        
Sbjct: 59  MTNLWKPMTTRGVKARDIGDNLFLFEFHDQYDKETVLIASPWCFDRQLLVLKDFNGDSQL 118

Query: 61  EDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRFLRVRVKMK 120
            ++  +EA FWVQ + LP+      V + +G  +GT++ V+       WGRFLRVRV++ 
Sbjct: 119 ANISLDEALFWVQIYDLPIMAMTREVGKAIGETMGTVEEVEAEADGTAWGRFLRVRVRLD 178

Query: 121 INEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKVQSK------- 180
           + +PL R   +  G    IL   +YERLP+FC+YCG LDH +  C  +++++K       
Sbjct: 179 VRKPLTRVKRVKLGSDPSILVYFRYERLPNFCFYCGKLDHGEREC-KMRLRNKGKMAAES 238

Query: 181 PEKQFGSWMRA 183
            E Q+G W+RA
Sbjct: 239 SENQYGVWLRA 248

BLAST of Lag0019091 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.9 bits (180), Expect = 3.4e-13
Identity = 43/132 (32.58%), Postives = 58/132 (43.94%), Query Frame = 0

Query: 32  DKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSR 91
           + +L  GPW F+D +ILL+       P+  +F    FWVQ   +P    N  V + +G  
Sbjct: 184 ETVLRRGPWAFNDWMILLQRWE----PQIPLFPFIPFWVQIRGIPFQFLNRGVVEHIGRA 243

Query: 92  LGTIQRVDTNETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCY 151
           LG +   D N        F RV +   I  PL              L   +YERL  FC 
Sbjct: 244 LGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRHFQFTAGVNTLLRFRYERLRGFCE 303

Query: 152 YCGMLDHNDGSC 164
            CGML H+ G+C
Sbjct: 304 VCGMLTHDFGAC 311

BLAST of Lag0019091 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 62.8 bits (151), Expect = 7.8e-10
Identity = 39/141 (27.66%), Postives = 60/141 (42.55%), Query Frame = 0

Query: 26  QSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVA 85
           QSE     IL  GPW F+D + +++  T   L  D  F+   FW+Q   +PL      + 
Sbjct: 67  QSEESMFSILRRGPWSFNDWMCVIQRWT--KLHSDAEFKRIPFWIQIRGIPLRFLTARII 126

Query: 86  QTLGSRLGTIQRVDTNETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIK--Y 145
            ++G R+G    ++TN                                 G+ ++V+K  Y
Sbjct: 127 TSIGERMGLF--LETN--------------------------------LGRDVSVLKFQY 171

Query: 146 ERLPDFCYYCGMLDHNDGSCP 165
           E+L +FC  CGML H+   CP
Sbjct: 187 EKLKNFCTTCGMLSHDASECP 171

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023888198.11.6e-3637.19uncharacterized protein LOC112000324 [Quercus suber][more]
XP_023926510.14.5e-3637.19uncharacterized protein LOC112037926 [Quercus suber][more]
XP_038716189.17.7e-3641.36uncharacterized protein At4g02000-like [Tripterygium wilfordii][more]
OMP03234.11.3e-3534.95hypothetical protein COLO4_10561 [Corchorus olitorius][more]
XP_038708494.12.9e-3534.51uncharacterized protein LOC120003548 [Tripterygium wilfordii][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1R3K8476.4e-3634.95Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10561 PE=4 SV=1[more]
A0A1R3GTB51.6e-3431.85Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23588 PE=4 SV... [more]
A0A6J1BSZ11.3e-3340.76uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A2N9E9493.9e-3337.50CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3389... [more]
A0A2N9F6898.6e-3336.13Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10176 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G31430.13.4e-1332.58unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G42140.17.8e-1027.66zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 1..115
e-value: 1.2E-18
score: 67.0
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 140..164
e-value: 1.4E-8
score: 34.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..422
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..255
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 354..399
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 32..215
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 32..215

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0019091.1Lag0019091.1mRNA