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Lag0019091 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGGAGTGTGGAAATTCTGCAGAGGGATAACTATTGATAATGTTGGGGACAACCTTTTCCTTATTAATCCTCAATCAGAACTGGGCAGGGACAAAATCTTGGATGAGGGTCCGTGGTGTTTTGATGATCATTTGATCCTCCTGAAACCTCCAACAACATTCGATTTACCAGAAGATATGGTATTTGAGGAAGCCAATTTTTGGGTTCAATTCCATCACTTACCGTTGGGACTAAGGAACGAGACGGTGGCTCAAACTCTTGGAAGTCGGTTAGGGACAATCCAGAGAGTTGATACTAATGAAACGGATGAATGCTGGGGTCGTTTCCTTCGAGTACGGGTTAAGATGAAGATTAATGAACCTCTATGTCGAAGCCTAACTCTAAATGGTGGACCAACCGGAAAAATATTGACAGTGATTAAGTACGAGCGTTTACCGGACTTTTGCTACTATTGTGGGATGCTTGACCACAATGACGGATCGTGTCCACATCTCAAAGTTCAATCAAAGCCGGAGAAACAATTTGGTTCGTGGATGCGAGCTGCAACTCCTCCGAGACGGAACCGTTTTCACACAAACGACAGGGGATATGAAGGACTTAGAGGGGGGAGAGGACGATTTGGACAACGACAAAGATGGAGGCAACCATGGCGATCTAATGCGGAGAAAGAGGAAGCCAACAATGGAGATTCAGGGGATCTTAAAAAATCCGACGAAAGCGATGATGAACGGCAACCTAAACACCATCTCCGGCCGCCTACTGCACCCGATTCCGGTGACACTTCCCTGCAATCAATGCCATCGACGAAAATTACGGGTAATAAATGTTCTTTTTCCTTTGATAACGCCACTAGTATGGTTTCCCTCCCTGTGCCTGCAGATGGCGTGATTCACGGCAAGGAGAAAGGAGAAATAAATGGCCTCACCGAAAAATCAGGAGAAGAAACGGTACATTTAAAGCGTACAGGAGAAAACCAGGGAGAAATATGGGGAAGAAACGACGTGGAGGGAAAGTTAGGGCAAGGAGGATCGGTGGGGAAAATTAAGTTTGGTGGGGCCAATCCTAATATTACCAACCAAACGACCCAACCAGTCCAAAAAATGAGCAAGCCCAGCCATCCAAACACCCAAAATAATACAACCCAGCCTATGGAAGCTGATCAAGACTCAAACTCCATTTTAAGACCAACAATAGGTGACCCAACTAATGATGCTCCAACATTAGGCCTGAAACCAGAAATTTTATTGGGGAATTGTGGTAAATGA ATGAAAGGAGTGTGGAAATTCTGCAGAGGGATAACTATTGATAATGTTGGGGACAACCTTTTCCTTATTAATCCTCAATCAGAACTGGGCAGGGACAAAATCTTGGATGAGGGTCCGTGGTGTTTTGATGATCATTTGATCCTCCTGAAACCTCCAACAACATTCGATTTACCAGAAGATATGGTATTTGAGGAAGCCAATTTTTGGGTTCAATTCCATCACTTACCGTTGGGACTAAGGAACGAGACGGTGGCTCAAACTCTTGGAAGTCGGTTAGGGACAATCCAGAGAGTTGATACTAATGAAACGGATGAATGCTGGGGTCGTTTCCTTCGAGTACGGGTTAAGATGAAGATTAATGAACCTCTATGTCGAAGCCTAACTCTAAATGGTGGACCAACCGGAAAAATATTGACAGTGATTAAGTACGAGCGTTTACCGGACTTTTGCTACTATTGTGGGATGCTTGACCACAATGACGGATCGTGTCCACATCTCAAAGTTCAATCAAAGCCGGAGAAACAATTTGGTTCGTGGATGCGAGCTGCAACTCCTCCGAGACGGAACCGTTTTCACACAAACGACAGGGGATATGAAGGACTTAGAGGGGGGAGAGGACGATTTGGACAACGACAAAGATGGAGGCAACCATGGCGATCTAATGCGGAGAAAGAGGAAGCCAACAATGGAGATTCAGGGGATCTTAAAAAATCCGACGAAAGCGATGATGAACGGCAACCTAAACACCATCTCCGGCCGCCTACTGCACCCGATTCCGGTGACACTTCCCTGCAATCAATGCCATCGACGAAAATTACGGGTAATAAATGTTCTTTTTCCTTTGATAACGCCACTAGTATGGTTTCCCTCCCTGTGCCTGCAGATGGCGTGATTCACGGCAAGGAGAAAGGAGAAATAAATGGCCTCACCGAAAAATCAGGAGAAGAAACGGTACATTTAAAGCGTACAGGAGAAAACCAGGGAGAAATATGGGGAAGAAACGACGTGGAGGGAAAGTTAGGGCAAGGAGGATCGGTGGGGAAAATTAAGTTTGGTGGGGCCAATCCTAATATTACCAACCAAACGACCCAACCAGTCCAAAAAATGAGCAAGCCCAGCCATCCAAACACCCAAAATAATACAACCCAGCCTATGGAAGCTGATCAAGACTCAAACTCCATTTTAAGACCAACAATAGGTGACCCAACTAATGATGCTCCAACATTAGGCCTGAAACCAGAAATTTTATTGGGGAATTGTGGTAAATGA ATGAAAGGAGTGTGGAAATTCTGCAGAGGGATAACTATTGATAATGTTGGGGACAACCTTTTCCTTATTAATCCTCAATCAGAACTGGGCAGGGACAAAATCTTGGATGAGGGTCCGTGGTGTTTTGATGATCATTTGATCCTCCTGAAACCTCCAACAACATTCGATTTACCAGAAGATATGGTATTTGAGGAAGCCAATTTTTGGGTTCAATTCCATCACTTACCGTTGGGACTAAGGAACGAGACGGTGGCTCAAACTCTTGGAAGTCGGTTAGGGACAATCCAGAGAGTTGATACTAATGAAACGGATGAATGCTGGGGTCGTTTCCTTCGAGTACGGGTTAAGATGAAGATTAATGAACCTCTATGTCGAAGCCTAACTCTAAATGGTGGACCAACCGGAAAAATATTGACAGTGATTAAGTACGAGCGTTTACCGGACTTTTGCTACTATTGTGGGATGCTTGACCACAATGACGGATCGTGTCCACATCTCAAAGTTCAATCAAAGCCGGAGAAACAATTTGGTTCGTGGATGCGAGCTGCAACTCCTCCGAGACGGAACCGTTTTCACACAAACGACAGGGGATATGAAGGACTTAGAGGGGGGAGAGGACGATTTGGACAACGACAAAGATGGAGGCAACCATGGCGATCTAATGCGGAGAAAGAGGAAGCCAACAATGGAGATTCAGGGGATCTTAAAAAATCCGACGAAAGCGATGATGAACGGCAACCTAAACACCATCTCCGGCCGCCTACTGCACCCGATTCCGGTGACACTTCCCTGCAATCAATGCCATCGACGAAAATTACGGGTAATAAATGTTCTTTTTCCTTTGATAACGCCACTAGTATGGTTTCCCTCCCTGTGCCTGCAGATGGCGTGATTCACGGCAAGGAGAAAGGAGAAATAAATGGCCTCACCGAAAAATCAGGAGAAGAAACGGTACATTTAAAGCGTACAGGAGAAAACCAGGGAGAAATATGGGGAAGAAACGACGTGGAGGGAAAGTTAGGGCAAGGAGGATCGGTGGGGAAAATTAAGTTTGGTGGGGCCAATCCTAATATTACCAACCAAACGACCCAACCAGTCCAAAAAATGAGCAAGCCCAGCCATCCAAACACCCAAAATAATACAACCCAGCCTATGGAAGCTGATCAAGACTCAAACTCCATTTTAAGACCAACAATAGGTGACCCAACTAATGATGCTCCAACATTAGGCCTGAAACCAGAAATTTTATTGGGGAATTGTGGTAAATGA MKGVWKFCRGITIDNVGDNLFLINPQSELGRDKILDEGPWCFDDHLILLKPPTTFDLPEDMVFEEANFWVQFHHLPLGLRNETVAQTLGSRLGTIQRVDTNETDECWGRFLRVRVKMKINEPLCRSLTLNGGPTGKILTVIKYERLPDFCYYCGMLDHNDGSCPHLKVQSKPEKQFGSWMRAATPPRRNRFHTNDRGYEGLRGGRGRFGQRQRWRQPWRSNAEKEEANNGDSGDLKKSDESDDERQPKHHLRPPTAPDSGDTSLQSMPSTKITGNKCSFSFDNATSMVSLPVPADGVIHGKEKGEINGLTEKSGEETVHLKRTGENQGEIWGRNDVEGKLGQGGSVGKIKFGGANPNITNQTTQPVQKMSKPSHPNTQNNTTQPMEADQDSNSILRPTIGDPTNDAPTLGLKPEILLGNCGK Homology
BLAST of Lag0019091 vs. NCBI nr
Match: XP_023888198.1 (uncharacterized protein LOC112000324 [Quercus suber]) HSP 1 Score: 164.9 bits (416), Expect = 1.6e-36 Identity = 74/199 (37.19%), Postives = 118/199 (59.30%), Query Frame = 0
BLAST of Lag0019091 vs. NCBI nr
Match: XP_023926510.1 (uncharacterized protein LOC112037926 [Quercus suber]) HSP 1 Score: 163.3 bits (412), Expect = 4.5e-36 Identity = 74/199 (37.19%), Postives = 117/199 (58.79%), Query Frame = 0
BLAST of Lag0019091 vs. NCBI nr
Match: XP_038716189.1 (uncharacterized protein At4g02000-like [Tripterygium wilfordii]) HSP 1 Score: 162.5 bits (410), Expect = 7.7e-36 Identity = 79/191 (41.36%), Postives = 114/191 (59.69%), Query Frame = 0
BLAST of Lag0019091 vs. NCBI nr
Match: OMP03234.1 (hypothetical protein COLO4_10561 [Corchorus olitorius]) HSP 1 Score: 161.8 bits (408), Expect = 1.3e-35 Identity = 72/206 (34.95%), Postives = 113/206 (54.85%), Query Frame = 0
BLAST of Lag0019091 vs. NCBI nr
Match: XP_038708494.1 (uncharacterized protein LOC120003548 [Tripterygium wilfordii]) HSP 1 Score: 160.6 bits (405), Expect = 2.9e-35 Identity = 98/284 (34.51%), Postives = 144/284 (50.70%), Query Frame = 0
BLAST of Lag0019091 vs. ExPASy TrEMBL
Match: A0A1R3K847 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10561 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 6.4e-36 Identity = 72/206 (34.95%), Postives = 113/206 (54.85%), Query Frame = 0
BLAST of Lag0019091 vs. ExPASy TrEMBL
Match: A0A1R3GTB5 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23588 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.6e-34 Identity = 86/270 (31.85%), Postives = 136/270 (50.37%), Query Frame = 0
BLAST of Lag0019091 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.3e-33 Identity = 75/184 (40.76%), Postives = 104/184 (56.52%), Query Frame = 0
BLAST of Lag0019091 vs. ExPASy TrEMBL
Match: A0A2N9E949 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3389 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 3.9e-33 Identity = 72/192 (37.50%), Postives = 107/192 (55.73%), Query Frame = 0
BLAST of Lag0019091 vs. ExPASy TrEMBL
Match: A0A2N9F689 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10176 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 8.6e-33 Identity = 69/191 (36.13%), Postives = 106/191 (55.50%), Query Frame = 0
BLAST of Lag0019091 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 73.9 bits (180), Expect = 3.4e-13 Identity = 43/132 (32.58%), Postives = 58/132 (43.94%), Query Frame = 0
BLAST of Lag0019091 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding ) HSP 1 Score: 62.8 bits (151), Expect = 7.8e-10 Identity = 39/141 (27.66%), Postives = 60/141 (42.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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