Lag0019069 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0019069
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr5: 38264922 .. 38265725 (+)
RNA-Seq ExpressionLag0019069
SyntenyLag0019069
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACCTGTATTTGACATCCAAGAGTGTCAATAAAAGAAGGGAATTTGCCGTGGGTGACAAATAAGATTTCTATAATATATCCGTCTACTGATAGACTTCGATTGTTCAGAGTCTATCTCAGTGTCTATCGCTGATAGACCTCGATTAATCGAAATCTATCAATAACTATCATTGATAGACTTTAATTAATTAAAATCTATCAATGATAGACACTGTTCGCACGTAACTTCGAGGATGGAGACACGTGGAATAAATAATATATTGTATTAATGTTGTATGCGTGTGGGTGTACAATCTCTAACTTTAATCCTCTGATTCTATTTCTTAAATATATAAACTTTGGTCTCTAGCTTCTTGATCTTCTTGGGCTGGTTTGTTGAGCTTTTTCTTGAATGATCGGCTTGCTAGGTTGATGATCTCTTAGATCGGCCTGTTGGCTTGATGATCTTCTTAGATGATCGGCCTGCTGGCTTAATGATCTCTTGGATCGGCCTGTTGTGACTTGTTGATCTTCTTGGATGATCAGCCTGTTGGCTTGTTGATTTTCTTGGATGATCGGTCTGCTGACTTGTTGATCTTCTCGGATGATCGGTTTGATGATCGGTCTGCTAACTTGTTGATCTTCTTGGATGATCGGCCTGTTGGCTTGTTGATCTTCTTGGATGATCGGCCTGTTGGCTTGTTGATCTTCTTGGATGATCGGTCTGCTAACTTATTGATCTTCTCAGATGATCGGTTTGATGATCTGTCGAATCGGCTTGTTAGCTTGTTGATCTTCTTGATCGGTCGATTGGCTTATTGA

mRNA sequence

ATGCACCTGTATTTGACATCCAAGAGTGTCAATAAAAGAAGGGAATTTGCCCCTGTTGGCTTGTTGATTTTCTTGGATGATCGGTCTGCTGACTTGTTGATCTTCTCGGATGATCGGTTTGATGATCGGTCTGCTAACTTGTTGATCTTCTTGGATGATCGGCCTGTTGGCTTGTTGATCTTCTTGGATGATCGGCCTGTTGGCTTGTTGATCTTCTTGGATGATCGGTCTGCTAACTTATTGATCTTCTCAGATGATCGGTTTGATGATCTGTCGAATCGGCTTGTTAGCTTGTTGATCTTCTTGATCGGTCGATTGGCTTATTGA

Coding sequence (CDS)

ATGCACCTGTATTTGACATCCAAGAGTGTCAATAAAAGAAGGGAATTTGCCCCTGTTGGCTTGTTGATTTTCTTGGATGATCGGTCTGCTGACTTGTTGATCTTCTCGGATGATCGGTTTGATGATCGGTCTGCTAACTTGTTGATCTTCTTGGATGATCGGCCTGTTGGCTTGTTGATCTTCTTGGATGATCGGCCTGTTGGCTTGTTGATCTTCTTGGATGATCGGTCTGCTAACTTATTGATCTTCTCAGATGATCGGTTTGATGATCTGTCGAATCGGCTTGTTAGCTTGTTGATCTTCTTGATCGGTCGATTGGCTTATTGA

Protein sequence

MHLYLTSKSVNKRREFAPVGLLIFLDDRSADLLIFSDDRFDDRSANLLIFLDDRPVGLLIFLDDRPVGLLIFLDDRSANLLIFSDDRFDDLSNRLVSLLIFLIGRLAY
Homology
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BLAST of Lag0019069 vs. NCBI nr
Match: WP_217833387.1 (hypothetical protein, partial [Synechococcus sp. PCC 7002])

HSP 1 Score: 68.2 bits (165), Expect = 5.1e-08
Identity = 37/59 (62.71%), Postives = 40/59 (67.80%), Query Frame = 0 

Query: 23 IFLDDRSADLLIFSDDRFDDRSANLLIFLDDRPVGLLIFLDDRPVGLLIFLDDRSANLL 82
          IFLDDR   LLIF     DDR   L+IF  DRP+GLL  LDDRP+GLLIFLDDR    L
Sbjct: 1  IFLDDRPLGLLIF----LDDRPLGLMIFFGDRPLGLLTCLDDRPLGLLIFLDDRPLEFL 55

The following BLAST results are available for this feature:
BLAST of Lag0019069 vs. NCBI nr
Match NameE-valueIdentityDescription
WP_217833387.15.1e-0862.71hypothetical protein, partial [Synechococcus sp. PCC 7002][more]
BLAST of Lag0019069 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0019069.1Lag0019069.1mRNA