Lag0019014 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCTCCAAGGACTTGGCGAATTTATTAACCACAAACAAGGGGTGGGTGAGTTTCGGACCTGTCATTCTTAAAGTTGAGAGATGGAACAAAGATATTCATGGCAAAATTAATGTGGTGCCCAATTATGGCGGGTGGGTGAGAATTAGGAACCTCCCGCTGCATTTATGGCACTTGCAAACATTTAAAGCGTTGGGGGACTGCTTGGGTGGCTTTATCGAATTGCTGAACCTAATTCCATACTCATTGACTGTGTGGAAGTTGGAATTAGAGTGAAAGGAAACTATTGCGGCTTCATCCCTGGGGAGATTGAGATTGTTGAGGATGACCGGGCATTCAAAGCTCAGATTGTTACCTTTGAGGAAGGAAATATGTTGATTAATCGGATTGCTGGAGTTCATGGAAGTTTTTCGCCGGAAGCTGCACACGCCTTCTACAGAGGCCCCATGGACCCGAACTTTAATCCAGTGGATAAATGGAGGATTGAGAATAGTACGTTATGCCGCAGGTTAAAACCCATCAGTTACCCGAGGAAGATAAAAGGGCTGACATAGCATTTAATGAAAAGCAATCGGCAGCCTGCAAAACTTTTGAATTATCCCGCCAGAAAGGAAAGATGAAAATGAATGAAGCCCATGAGCCCATGAACAAATTAGAGAGTAGCACGGAATATCAGAATAGAATGAGGGATCAGGCCCAAAAGGAACGCCCCAAAAGGAAGAGCCCAGAGACTAGCCCGAGGGTCTTGACTAAATCGAAAAAAGGGGTTTCCTTCGCCAAAGAAGCCCAGGTTACTCTGTTTAAAAAAGGCAAGACGCAATTCACGAATAAGAAAAATGACCCACGATGTCAACATGATTATAAGGATTATGATGATGAAGAAACTCAATCTGGATTCTCGATCTCAAGCCCCGGAAGCAAAACAGAGGATGAAAACTTGGTTGAGGAAGATCGAACAGAGTCTTACGAAGATATACCGGGAGAATATTTCAACTGCTTTGTACAAGATGGTGAATGCTCATCTCAGGCCAATATCGGCTGCAAGGGTGATAAGGACGGAGCCCATAGCTATAGTAGGTCGGAGTATGATGGGGGTGATGAGATAGTCCCTCTTTCGCTGGTGGATTTTGAGGAGGGGCACCATGAGATCGAGGTGCACGACCAATCTCACCCAACGGCTCTGGACGTGATTACCCCTACGGGAAAGGAAAACAGAGCTCCTCCCAACATCGAAGGTTTTGCGATTAGTAGAGACTTGATCCTCACTTTAAAAGGAATAATTTGTGTATTCGCCGATTGCGGGTGTCGCTGCTAA ATGCCCTCCAAGGACTTGGCGAATTTATTAACCACAAACAAGGGGTGGGTGAGTTTCGGACCTGTCATTCTTAAAGTTGAGAGATGGAACAAAGATATTCATGGCAAAATTAATGTGGTGCCCAATTATGGCGGAGTGAAAGGAAACTATTGCGGCTTCATCCCTGGGGAGATTGAGATTGTTGAGGATGACCGGGCATTCAAAGCTCAGATTGTTACCTTTGAGGAAGGAAATATGTTGATTAATCGGATTGCTGGAGTTCATGGAAGTTTTTCGCCGGAAGCTGCACACGCCTTCTACAGAGGCCCCATGGACCCGAACTTTAATCCAGTGGATAAATGGAGGATTGAGAATACCTGCAAAACTTTTGAATTATCCCGCCAGAAAGGAAAGATGAAAATGAATGAAGCCCATGAGCCCATGAACAAATTAGAGAGTAGCACGGAATATCAGAATAGAATGAGGGATCAGGCCCAAAAGGAACGCCCCAAAAGGAAGAGCCCAGAGACTAGCCCGAGGGTCTTGACTAAATCGAAAAAAGGGGTTTCCTTCGCCAAAGAAGCCCAGGTTACTCTGTTTAAAAAAGGCAAGACGCAATTCACGAATAAGAAAAATGACCCACGATGTCAACATGATTATAAGGATTATGATGATGAAGAAACTCAATCTGGATTCTCGATCTCAAGCCCCGGAAGCAAAACAGAGGATGAAAACTTGGTTGAGGAAGATCGAACAGAGTCTTACGAAGATATACCGGGAGAATATTTCAACTGCTTTGTACAAGATGGTGAATGCTCATCTCAGGCCAATATCGGCTGCAAGGGTGATAAGGACGGAGCCCATAGCTATAGTAGGTCGGAGTATGATGGGGGTGATGAGATAGTCCCTCTTTCGCTGGTGGATTTTGAGGAGGGGCACCATGAGATCGAGGTGCACGACCAATCTCACCCAACGGCTCTGGACGTGATTACCCCTACGGGAAAGGAAAACAGAGCTCCTCCCAACATCGAAGGTTTTGCGATTAGTAGAGACTTGATCCTCACTTTAAAAGGAATAATTTGTGTATTCGCCGATTGCGGGTGTCGCTGCTAA ATGCCCTCCAAGGACTTGGCGAATTTATTAACCACAAACAAGGGGTGGGTGAGTTTCGGACCTGTCATTCTTAAAGTTGAGAGATGGAACAAAGATATTCATGGCAAAATTAATGTGGTGCCCAATTATGGCGGAGTGAAAGGAAACTATTGCGGCTTCATCCCTGGGGAGATTGAGATTGTTGAGGATGACCGGGCATTCAAAGCTCAGATTGTTACCTTTGAGGAAGGAAATATGTTGATTAATCGGATTGCTGGAGTTCATGGAAGTTTTTCGCCGGAAGCTGCACACGCCTTCTACAGAGGCCCCATGGACCCGAACTTTAATCCAGTGGATAAATGGAGGATTGAGAATACCTGCAAAACTTTTGAATTATCCCGCCAGAAAGGAAAGATGAAAATGAATGAAGCCCATGAGCCCATGAACAAATTAGAGAGTAGCACGGAATATCAGAATAGAATGAGGGATCAGGCCCAAAAGGAACGCCCCAAAAGGAAGAGCCCAGAGACTAGCCCGAGGGTCTTGACTAAATCGAAAAAAGGGGTTTCCTTCGCCAAAGAAGCCCAGGTTACTCTGTTTAAAAAAGGCAAGACGCAATTCACGAATAAGAAAAATGACCCACGATGTCAACATGATTATAAGGATTATGATGATGAAGAAACTCAATCTGGATTCTCGATCTCAAGCCCCGGAAGCAAAACAGAGGATGAAAACTTGGTTGAGGAAGATCGAACAGAGTCTTACGAAGATATACCGGGAGAATATTTCAACTGCTTTGTACAAGATGGTGAATGCTCATCTCAGGCCAATATCGGCTGCAAGGGTGATAAGGACGGAGCCCATAGCTATAGTAGGTCGGAGTATGATGGGGGTGATGAGATAGTCCCTCTTTCGCTGGTGGATTTTGAGGAGGGGCACCATGAGATCGAGGTGCACGACCAATCTCACCCAACGGCTCTGGACGTGATTACCCCTACGGGAAAGGAAAACAGAGCTCCTCCCAACATCGAAGGTTTTGCGATTAGTAGAGACTTGATCCTCACTTTAAAAGGAATAATTTGTGTATTCGCCGATTGCGGGTGTCGCTGCTAA MPSKDLANLLTTNKGWVSFGPVILKVERWNKDIHGKINVVPNYGGVKGNYCGFIPGEIEIVEDDRAFKAQIVTFEEGNMLINRIAGVHGSFSPEAAHAFYRGPMDPNFNPVDKWRIENTCKTFELSRQKGKMKMNEAHEPMNKLESSTEYQNRMRDQAQKERPKRKSPETSPRVLTKSKKGVSFAKEAQVTLFKKGKTQFTNKKNDPRCQHDYKDYDDEETQSGFSISSPGSKTEDENLVEEDRTESYEDIPGEYFNCFVQDGECSSQANIGCKGDKDGAHSYSRSEYDGGDEIVPLSLVDFEEGHHEIEVHDQSHPTALDVITPTGKENRAPPNIEGFAISRDLILTLKGIICVFADCGCRC Homology
BLAST of Lag0019014 vs. NCBI nr
Match: XP_022149859.1 (uncharacterized protein LOC111018186 [Momordica charantia] >XP_022149860.1 uncharacterized protein LOC111018186 [Momordica charantia]) HSP 1 Score: 125.2 bits (313), Expect = 1.2e-24 Identity = 61/165 (36.97%), Postives = 85/165 (51.52%), Query Frame = 0
BLAST of Lag0019014 vs. NCBI nr
Match: XP_031741396.1 (general transcription factor IIF subunit 2 isoform X2 [Cucumis sativus]) HSP 1 Score: 73.6 bits (179), Expect = 4.1e-09 Identity = 27/58 (46.55%), Postives = 45/58 (77.59%), Query Frame = 0
BLAST of Lag0019014 vs. NCBI nr
Match: KAA0056565.1 (hypothetical protein E6C27_scaffold288G00700 [Cucumis melo var. makuwa]) HSP 1 Score: 68.2 bits (165), Expect = 1.7e-07 Identity = 43/151 (28.48%), Postives = 60/151 (39.74%), Query Frame = 0
BLAST of Lag0019014 vs. NCBI nr
Match: TYK24247.1 (hypothetical protein E5676_scaffold205G00050 [Cucumis melo var. makuwa]) HSP 1 Score: 68.2 bits (165), Expect = 1.7e-07 Identity = 43/151 (28.48%), Postives = 60/151 (39.74%), Query Frame = 0
BLAST of Lag0019014 vs. NCBI nr
Match: ADN33672.1 (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 67.4 bits (163), Expect = 2.9e-07 Identity = 39/140 (27.86%), Postives = 58/140 (41.43%), Query Frame = 0
BLAST of Lag0019014 vs. ExPASy TrEMBL
Match: A0A6J1D6X4 (uncharacterized protein LOC111018186 OS=Momordica charantia OX=3673 GN=LOC111018186 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 5.7e-25 Identity = 61/165 (36.97%), Postives = 85/165 (51.52%), Query Frame = 0
BLAST of Lag0019014 vs. ExPASy TrEMBL
Match: A0A5A7TEP0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00440 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.4e-07 Identity = 87/326 (26.69%), Postives = 120/326 (36.81%), Query Frame = 0
BLAST of Lag0019014 vs. ExPASy TrEMBL
Match: A0A5D3DLT1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00990 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.1e-07 Identity = 68/263 (25.86%), Postives = 104/263 (39.54%), Query Frame = 0
BLAST of Lag0019014 vs. ExPASy TrEMBL
Match: A0A5D3BSE0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00040 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.6e-06 Identity = 40/151 (26.49%), Postives = 59/151 (39.07%), Query Frame = 0
BLAST of Lag0019014 vs. ExPASy TrEMBL
Match: A0A5A7TRS9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003060 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.5e-06 Identity = 85/323 (26.32%), Postives = 118/323 (36.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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