Lag0019012 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0019012
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionComponent of oligomeric Golgi complex 4
Locationchr5: 37600024 .. 37612585 (+)
RNA-Seq ExpressionLag0019012
SyntenyLag0019012
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTTGCGGTTTATACTACTTTACTCTCCGTTAGGTTTGGAGGAGGAAGGGTTGCAGGTTTATGTGGGGTACTTGAAGAAGGTGATTGGGATGAGGTCTAGGCTTGAATTTGAGAATTTGGTGGAGTTGATGGAGAAACAATACCAAAATCATAATGTGAGTGGTAATCAAAGCCAAGTTAATTTTGTTGGGTGCTTGACAAATTTGTTCAAGGATATTGTTTTGGCTATGGAAGAAAATGATGAGATCTTAAAGGAGTGTCTGTGTTGATGGGTGAGGATGAGATTGTATATGCAATCTGTGAACTTCAGGAGGAGTGTGATTCACGTACGTGGATCTTTAGTCTTGAAGAAGTATGTGGAATATAGGATATTGACTCAGTTGTCTGAAATTAATGCTCAAAACAAGAATTTGCTTGTTGTTGGTGGACCGAAAGGACCTGATCCAAGGGAAGTTGAGTTATACTTGGACGAATTGCTTTTTTATATATATATATATATAAATACCAGCTTTCATTGAGAAAAAATGAAAGAATACAAGGGCATACAAAATACCAGCCCACAAACAGACCCCCTTTTAAACGAAGGGTCGTCAATCCAAGATTATACAACCTAAAGAGTAGTTACAAAAAGCCTTAGACATTGAGGCCTAGAGATAAACATAGAATCTAGTGAGAGCCCAAACATCAAAAGGACTCCTCTCAAGACCACAAAACACCCTATTATTCCTCTCGCTCCAAAGACTCCATAACACAGCACACACCCCAGCTAACCATAAAAACCTCCCCTTATCGCAAAAAGGCGGATGGAGGAGGAACTCTTGGATCATCTCCCTGTAGTCTCTAAAGGGTCTCGTCTGTAGTCCAAAAGCGAATACTTTGAGGAATTGTTGACGTTGATGCAGTTAGATGAGGATTACACTGAAATCATGGTCTCCAAAATCAAGGGAGATTGAGTTCTATAGATCCAGAGTTGGTTCCCCGAGCTACAAAGGCTTTCAAAAGTGGTCGTTTTAGCAAAATGGTTCAAGACATTACGGATTTTATCTGATTCTAGAGGGATTTTTCATGGTTGAAAATGTGAGGAAAACTATCAAGATAGATGAGTAGGTGCCTGATAGTCTTACAACCTCTATGGTAGACGATATGTTCTATGTCCTACAGAATTGCTTAAGACGTGCGACATCCACTTCGAATATCTGCTCATTGATTGCAGTTCTGAGTGGTCCTAGTAGTCTATTGAACAATGAGTACCAAGAGGCATTACAATAGAAAATGCGAGAACCAAATTTAAGTGCAAAACTATTCTTTTAGGTGGTGTTGGTGTACAAAAGACGGGGATAGAGATCGCAATAGCTTTGAATAACATGGACGTGAGCAGTGAATATGTTTTGAAACTCAAACATGAGATTGAGGAGCAATGTGCAGAGGTATCATACTTCACCTTGACATGTACTTCAAAGATAACTACTATTATTGTTCTATATTACACAACCTTTTGTTTCACACTTAGTTTTTCCTTTTTCATGTTCTGTGGCATCTTTGTTTATTGTTTAAAGGTAGGTTGAGATGTTGTGTGAATTTATAACCTTAGCAAATGAGTATTGCTTTTGAAATTGCATAGTTCATTGTCATACATCTGATAGCATATAACTATAGAAGTTTATTAAGTGGAAAATATATATGGATATGGAAGTGGAATTTAACCAATTGCTTGTGTATTTACCTCCACCAAATGCCACGATTTATAGGCAATTTGGCAAGTAGGATGTGGCTTAAAGTAGACACCAATCATCTATTGTTACAAGACACATGGACAATTTGAAAATGGACACATGGACAACATGAAAATGGACACGTGATTTAGAACACTAAGCATATGGGCATCTATCTTATAATATTTATAATAACAACATATTTTTAACGTTTTGCTTGTATCTCTTATCTCTTACTTTCAAAAAGGTAAAAACAAAAACAAATCATATTAAAAAATTAAATGTAACATATCTAAAACTATGTTCTTGTTGACATTACCAAATATGTTACTAAGTTAATATTAAAAAATAATAATAATAAAAACAAGATGAAGTTACTAAAAGTAATTTTGTTTTGTATTTTTTTTTTCTTTTCTAAAATAAGAAGGAAAAAAAAAACCAGAGAATACAAGTAACTGAAACTAAAAGGCTAACATGCAGACCCTACAAAACTTCTTTTAACAAAAACCATTCTTTCACACAAAAATAATGAGGAATGACCCATTAAAAATCTAACAACTATTTATATTTAATAAATAAAAAAAAATGTCTACTTTCTCTCTCCTTAATTGCATGTCTCCCTCTCTTTCTTACCAAAAAGTTAATAATGGTCAGGAAGAAAGTCTTGTCTTGCTTACCAATCAAAATTGCTAGATAAGTTTATTATTTTATAGATGCAGAATCCATAAAAGAATAGACACAACTTGGCAAAAGCGCACACACAATGAATGGAGAAGTAAAAAAATAAAAAAAAAGAATGGAGAAGTAAAAATTATAGTGAGTTTGAAAAACATTTTATTATATAAAAATTGTTTAGAATTTAAACACTCATATGTTTGGTTGCATTTTCCCATAGATGTTTTTATACACAAGTTATTGTATACTTAAAGAACTCTTACAAAAGTTGGTTTTAAGTGTTTCTCTCAAAATGGTTTATTTATCAATCTCATTTTTAGTGGTTGTCAAACACAATAAATTTTTTCAAAATGATTTTCATCCTCAAACTTCTGTCAAGTTTTTCATTGTGATCCCTAAGATCCTGCTTGAACTTTTATAGGCTTTCTATTCTTGGTCGTCTATGCTTGATATCTCAATTGAATAATGTTTAATCCTTTATCATAAAGGTGGTAATATCAAATATGGATACGACATATTGAATAGATGAAAGATGATTAGTAACATACATGTAAATACTTCTTATAACATAGCCAAAGATGTTAAAATTGTGTCCTTAATCAATTAAAAGAAAAGCACAAAAGATAAAGAGTGTTTTGGTGTTCATCAGCCAACACAAAGCACAGAATCATAGAACAAGGTATAAGGAGCAATTTTGGGAATTTTAAAACAAAAGCTTAAGAAAAAAACATAAGCTAATAGCTATTTGTTCTTCCTAAATCATAGACTTGACCAAGTTACAGGCCCTTGTGGTCTTGAAAGAAGCCCAAGCCCAATTATCATACCTAAGATTCACGATTTATGTTTCTTTATTTCTAGTTTTGTTTTGTCTTGATGGAGATCTTAATTTGATCTCATTTAACAAAAATGTTGTTTCTCAAAAAAAAACAAATGTCTCGTTTGATAACCATTTGGGTTTTGAAAATTATGCTTGTTTTTTTTCTTAAATTCCCTACCATGATTTTCATCTTTGTTAAGGATTCATTTGAATTTCTAGTCAAGTTCTAAAAACAAAAACTACTTTTTGAAAACTACTTTTTTTTTTTCAAAATTGGACTTGGTTTTTTAAACAAAGAAGAAGATTGATACTAGAACAAAGAAATGTATAGGTGGAAGTAGGTGTGTATAAGCTTAATTTTCAAAAACCAAAAATAAAAAATCAAATGGTTATCAAATTGGGCCAAAAATATGGAGATCTCACCCAAACCATTTCCTTAAAATAATAGTAGTAGTAATAATAATTTAAAAAAATACAGAAAATACCCTAAAGTCTCATCTCAATAATATCCTTCAACCTCAAAAAGTTTCGAAATTAACTCTAGTCTTAAAAAAAAAAAAAAAAAAAATCAAAATTACCACGTATTTTATGGAAAACATCAAATTCGCTTCAGTTTCATTTCATTGACCTTTCAAAAAATTTCAAAAATATCCCTACTAAAAAACATTTCTTCTTCTTCATCTCTATGCAAATTCTTTCTCCATGGAAAAATAATGAAAAGCTTCGCATATTTGCCATGTTTTCGTAGATGGTGAGTTTTTATTCTCCTTCAACACATCCCAAAAGAATTACTAGATTCTTATGTTAAAGCATCAAGATGACTATTGTTTCATTCTTGAATTCTTCATGTCATTAATTGATTTTATTGATAGCGTCCGGACGCTACAATGAAAAGTCCTAAGTATAAATTCATTTTATTTCTTTCCCATGGAGTACCAAGAGAGAATTTTCAAAATAAATATATATATATATATATATATATGTGTGTGTGTGTGTGTGGAGAAATTGGTTGGATTCATCATTTTGGGATCCCGAGGTGCCCAACAGTGCGAAGTTTGAAGACTCGTGGAATCGTTGGGATTTGTTTCTTTTTCCTTTTCCCTTCTCCTTTCTTGTTGGTAATGACTTCAACGTGTGATGTCATAATTCGAGGGTGAGAACAAGAGTTAAAATGTCAACATCAAATGAAATGTCAATGTCTCAATTTTATGGAACTGTGTTGATGGAAATATTGACAAAATGTCGATGTCGATAGACATTTCTCAAAAAATGTTTAAAACAAGAAGATTCAAAAAAATATTTAAAGTAATAAATAAATGTTTTACCATTTTAAAATAAGTTAAAATATTTATTATAAATATTATCTCCACACTAAGATTAAAAATCTTTTTTGGTCTCTGAACTTTATCACGAAAGTAACAATTTTGTCCCTGAACTTTGATTTGTAACAATTTAGTCCTTGTAATTTTAATTTTGTAACAATTTAGTCCCTGAACTTTAATGAGTAACAATTTAGTCATCATACTTTCAAATTTGTAACAATTTAATCATTGTTGCAAAAAAAAATCATCAAAATTAAATTTCGATTTTTATTATCTAATAATTAGACTTTGTAGCTTATAACCATATTGAGTCCCCAATTAGTTTATCTATGTAATTTTTTTTTATTAAATCTTAACATCAAATTTCACGATAGGGATTAAATTGTCACAAATTTTAAATTAATACACGGACTAAATTGTTATATATGAAATGTTAAGGACTAAATTGTAACAAAATTGAAAGCAAATGGACTAAATCATTACAAATCAAAGTTTATGGACTAAATTGTTACTTCATGAAAATTTAGGGGACCAAAACTAATTTTATCCCCACATTAATTACATTTTTTCTATTATTTCGATCGAATTTTCTACGGTATAATGGAAATATCGATTCACCCTTCGTGTCGATGTCAAACCCATGGACATGTGGAAATGTCGATAGAAATGTCGACATATCGATGAAGATTTAATACACTGGTTGAACGACAATAATTATTGATAGATCTAAATAATTTTCCTCAATTTATACAAGAGATAGAGATATTCTTATAGATTTTGTGGCAATTTTTAGGTTTTATGTTTTTCATTATTTGAATGGTTGGAATTGTTATGGAGATATAGGCAATTTACTGTCCAAGGAATTTTGTTATCGATGGAGAGATGATATTGATTCTATAGGCTAGAGCTTGCACAACAACCTATAAATAGATATATTTCAACTATTAATGATCGAAAAATAGGATGAGATAAATGTGAAATCATTGTTCTAAGTTTCCAGCAACTAAGCCCGTTTGATAACGTTCTTGTTTCTTGTTTTCAATTTTATTAAGAAATCTAAGGATTTAATAACTATGTATGTTTCTTGTTTCTCATTTTTTAGAAACACTCCCAAAATTTGTATAGAACTTTTGGGAACAACTAAAACTTGTTTCTCCTTTTTTGTTCTTGTTTCCAATTTTTTCCAAATATAAATAAGAATATAGGTTTATTATTATTGAATGTATAGGTGTTAGGGTCATGAAATTCTATTTTTCTTCACTAAAAATGAAGAAACAGAAACAAGAAAACGTTACCAAACAAGCCCTAAATTTACTCTTTTTGTTATTGTTAGTTTTAGGTTTTATTAGAATAGTTTAATTAAATGCATTTTTAATTTTCATCCATTTTTTAGAAGATCTCTCTGAATCCAAATTTGTGTTGAAGTCGATGCTGTAGAGGTGATTCAAGCCCTGAATTTCGAGAGATTGAAGATCTTTCTGAATCCAAATTTGTGTTTGGATGAGGTCGAGGCTCTCGCTTCGTCGGCGGGAGTAATCCGTTTCTCAAAATGCCTTAGGGGAGGTAACAAATCCGCGCACACTCTCGCGCGGGCGGTGGCTGGCTTTGTACCGAAGGCGATCTCTGAGTTTTCTAGAGTGGCCGTTGACGTTAGGGATGGTTTTGGTAGTTTTTGTGACCTTTCATCTTCGGAAGGTTTATTTTTGTGGAGGGAAGGTTGTTTCCCTTCGTGGATGGCCTCAGTTATTGAGGATGAGTTAGTTGTATCTGTTTGCAAAGACGTTTCCTTTTTCAACAAAAAAAAAATGTATTCTTCTTTGAGGCTATGATACAAAAATGTATTCTTCTTTGAGGCTATGATACAAAGTGCTTTTGCTTTGCCTTTGTACATGTAATCCTTTTGCTTCATATATTTTTCCTTTTCTTTTTTAATTAGATAGATTAAGGGTCCGTTTGGAATACATTTGAATTTAAATGTTTCCTAAGAATGCATTTAAAAAAAAAAAAACATTTTGTATAAAAATTGTTTAGAATTTAAACACTCATATGTTTGTTGCATTTACTCGCAAATGTTTTTCTACACAAGTTATTGTTTACTTAAGAAGTCTTTTTTTGAAAAGTTGGTTTCAAGTGTTTCTCTCAAAATGGTTTATTTATCAATCTTATTTTCTAAGAAGTCATTTTTAGGTCTTGCCAAACACTGTAAATTTTTTCAAAATGATTTGTTTTCAAAATTAAACACTTAAAAATGTAAACCAAACACACCCTAAATTATATTAGTCTCTCGATTAGTGAAATTAGTTTCTTCTACCTTTATTTTGATTGTGGATTGAAAAATATTTGCAATGTAAGTGGTTACTTTATTTTTTTATTTTTTTATTTATTTATTTATTTTGAGATAGAAAGTGGTTGCTTTATTTTCATATTAGTCAAAAGACTCAAAACTCTCTTTATGCATTTTTTTCTTTCTAAATGGTTTATCTCATGTTCTACAGGACTATGCATTTGCAATTGCCATGAGGGGTCTTCACCACAACGAGAGTGGGTATTTTTTAGATTATGCCACAAATACATGAGGATATGTTGAATTATTTCGTTTATATATTGATTTTATAATTAGTTTTAGGATAAGTTTGGTTTAATTTTTTAAGTGTTCAGTTTTGAAAAAAAAAAATCATTTTGAACAAATTTCTAATGTTTGGCAACCACTAAAAATGACTTATTAGAAAATGAGAATGATAAATAAACCATTTTGAGAGAAACACTTGAAACCAATTTTTTTTAAAAAGACTTCTTAAGTATACAATAGCTTGTATATAAAAACACTTGTGAGAAAATGCAACCAAACATATCATATGAGTGTTTAAATTCTAAACAATTTTTATACAAAATGTTTTTTAAAAAATGCATTCTTGAAAAACATTTAAATTAGAATGTATTCCAAACGGACCCTTAGAATATAACATTATGAAGGTGGGAATAGTGAAGTTTGAAACCTAGGGGAGAGGGAAAGGGGAGAAGAAGGATAATCAATGGGGGAAGGAAGATAAGGGAAGAGAGAGAAAGGGAAAAAGGGGAAAAAAGAAAATAACATGTAACCTAAAAAATAATAATATAAAATTATTAAATTGGTTACCTCAATTAAAATGTGTCATACCTTAACATGTCACATCATTTTCCCGTTAGTTAACTAACGATCAAATTAACTCATTGACCATTAAGAAATATTTTTCAAACCTTGAGGATTAAAGTATCATTTTTTAAACTTTAGAGACCAAATAGACATCAAGCTCAAACTTCAAGGATCAAAAGTGTATTTTGCCATTTTAATTACAATAAGTGGGTGGTGAAGGAAGAAATGTGAGTTTAATTTTTTTTTTTTTTAAAAAAAATAATTTTACTACTTACTTACTTACTTGGAAGAGTTACGAGGAAGAGTTTCTTTTGTATCAATGAAATCTAGATTGATTCAATTTATTTATAACAATTGTTTTTCCTAAACTTTTATAACAAATTTAGATCGAATAAAGTTACTTGTAATTTAATTAAATTATATGGTTTTTAAAATATTTATTATTTAATAATTATCTAATAATAAATTTGATATTAAATATTAATATAAAAATAATTGAAATATTATGTTTTCTTTTGTCAGCAACTTAGTATTAATTTATCAAACACCATCGTATGTTTTTTTCATGTTTAAAAATTAAATTTACCCAACACCGTTTTTACTTCATATCACAATTAATTTTTCTAAAAACACACGCCAACAATTATTTTAAAAGCTACAACAATTTCAAACTAAGCCTAAAAAGGTTATCAACAAAATCAAGTCAAGAACATGAAAATTTAAAAATGAAGCAAAAATCATTTTGAAGCTTCAATATAAGAATTTAGATAGACAACGGTTGGGGTGTTGTGTCAAAGGAGAATAAAAACTTAAAGTCTATGAATACATGACAAATAAGCAAAACTTCTCATTAGTTTCTATGAAAAAAGAATTTGGGAGAGAACCGAAGAAGAATTAAGCATTTTCTTTAGTAGGGATATTTTGTAAATTTTCTAAAAGGTCAAATGTATTAATGAAACTGAAACTTTAACCTTTCTTATCAAATATTTAATAAGTAATGATATTTTTTAACATCTTTTAAAGGTCAAAAGTATTTTTAAAACTTTTTAAAAATCCAGAGATAATATTCAAATGAGGTATAAAATTCGGGAGTATTTTTTATAATTTTGCCTAGATAGTAATATTCACATTGACCTAAAGAAACATGGATTAGAAACATCAAGTTTAAAATATTGTATATTTAATATGAGCATTAATTTAAAATATGGTATAGTTCAACTGACATAATGTCTATACTAATGACTAAAATGTCTGTAGTTCTAATTTTCTCCACTTCACATGTTGTAGATAAAAAAAGAAAAAAAAAATTAAAATATTGTACATTTGAGATAATTGTCATATCCTTAATCTTTATCCCCGTATAGTTGGAGTAAAAAATGAAAAGAAGAAGAAGAAAATATATATATATATCATTATCCCTAAGGATGCAAAGTCTTCAAATAGACGTGGACATTAGAGAAAAAGGTGTTGTCTTTCCAATTTAATTTTGAATTGACCTCTCAAGTCTTCATCAAAATCATTACGTCTTCCAAGCAAAGGTTGTGAAATTTCTTCAACATTAAATATCTTGTCTATTAAACCTTGGATTAGTTTAAAAAAAAAAAAAAAACTTGGGGTAAAATATAGTTTTGATTTTAAAAATCTAATCACTCTATTGATTTCAATTTGATCCTCAAGTTACAAGTTTCCATCCAATTTCTTCCATCATCCCAAATTTAATAAATTGCAGATTCGTTTAGTACTATTAAAATTTTACATATGTATGTATGTATTCACACAACTACACATTTGTTTTTTTGTTTTTTTTTTTTTAAATAAATATATACACATTACTTGTGTATCATTGAGAGAAAAAACAGCAGGTTAATTTTTTTTTTTTTTAAATAAGTATGTTTTATAGTCAAAAGAGGAATCTGTGTGTATGTATATAGATATTTTACAACATTTGAGGTGAGCAGATTTGAACCACATGCTTCTTGATCATTAGTATAAGCTTTATATGTTGAGTTATGTTCATGTTAGCAGAAACTATATATACATGTGTATATATATAATATGAAACTTCTCTACACATTTGATGATAAATAAAACATAACATATGTCAAAGTGAGCATAGCTCAGCAGTAATTGGCATGTACTCTTGCCCGAGAGGTCAGAGGTTCAAATTCTAGAATTCTCCATCTCCCAAGTGTTGATGTACTAAAAAAATAATAATAATAAATTAAAAAAAAAAACATAACATATGATTTTTTTTTCTCTTTTTCTCTCTATTATTAAATGTTTTGATTGTTGATGATTGAATATTTAATTTATATCCGTTAAAAAAAAAATAGTAATATTTATGGTGTGTTTGGTTTAACTTTTCAAGTGTTTAATTTTGAAAATAAATCATTTTGAAAAAAATTCTAATCTTTGGCAACCACCACAAATAACTTGTTAGAAAATGAGATTGATAAATAAACCATTTTGAGATAAACACTTAAAACCAACTTTTTAAAAATGACTTTTTAATTGAACAATTAATGAGAAGATCCAATGTGATTCTAGCATTGCCTCAACACCGTGGGACATCAAAGATATGAGAAATTCCTTTGATAAGGTCGTTTTTAAGTTTGTTAGTCGTAAGTGTTGTGGGTGATCTTGGACCACCCTAGGATCCAAGGACTAAGCAGGACAACATAGCACAACACCAAACGTGGTCGGGAAGCGGACTATGGAGGGGAGTGAACCGAAGGGATTGGGCCACCCCGACCCAATCCCATGGTCAACCCTTCGTGTGGGCCGAGTTCTTTCCACCTCCGTTCGTCCCAACTGCCTCGGTCCGTCCCAGTTCCACTCGGCTCAGCTCATAATCGCTTTTGAATGCCTAGAAAGCCCTAATTGAAGACACATGTATAAATAAGGTCTCTCACACCCGAAAAAGGGTTCCCAACTTTGGCTACCAAAATACACTCTTTCTATTTTTATCTGACTTAGGCATCAGAGTGCATGTGACCTACACCACACCGGTGTGCAGCAGTTTTGACTGGTCTTGCAGGTCACATCTTCCCCGTCTTCAACAAATTCACTGCTGATGTCACGTGATGGTCAGGTGAGTTGTTTGGCCAGATTTTGGCATCAACAGTAAGTTCAATGGATTTTCCCACAAGACTGCTAGACTGGGTCTTGAATCTGCACACTTCTTGTGGCTATAAAACTATCCCGAGTGGATGGTTTGTTTATCGCTCCATGAGCAAAATATGTTTGTATCCCCTTGGGGTTTGGTTGATTGTTAATGAAACTTTGTTCCTTAAAAAAAAAAAAAACCTACGGTTCATAAGCTTTATTACATAAAAGATTTAAGAAAAAAAAAAGTTTAATCTTTTGAAAAGTTTTATAGTATAAAAAATAATATTAAGGCCTCGTTTGATAACCATTTTGTTTTTTGTTTTTGGTTTTTGAAAATTTAGCCTATAAACACTATTTCCACTAATAAGTTTCTTTGTTTTGTTCCCTAACTTCTTCTCATGTTTTCAAAAACCAATTCAAATTTTGAAAACTAAAAAAAGTAGTTTCCAAAAACTTGTTTTTGTTTTTGGAATTTGACTAGGAATTCAAATATGCCCTTGACAAAAATGAAAACAATAGTAAGAAATTTAGGAGAAAACAAGCTTAATTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCAAATGGTTATCAAATGAGGCCTAAATAATGACAATATTTGACTTATGCATATGGATCTTCTTATCCACCACAGTTAAGATGTTTGACAACAAAGAGAGAGTATAAATATTTTGGGCAAAATATACTTTTGGTCCCTGAGGTTTGAAATTGATGTCTATTTGGTCCCTAAGGTTTGAAAAGAGATACTTTAGTCCCTCAAGTTTGGAAGATGATTCTAAATGGTCCTTGATTTAACTTTAAACTAACGGAATTGTGACTGGACCGTTATCTGCTGACATGGATTGACCTGCCATCCTGTTGGATTATTTGAAATAAGCTGGAAAATAATACATCTTTTAAGTATAAATTAGGTTTAAATCTCATTTTAGTCCCTAAACTTTTAAGTTTGTTCTATTTTAATCCTTAAACATTCAAAACGTTCATTTTGGTCCTTAAACTTTTAAATTTGTTCTATTCTAGTCCCTGAATTTTCATAATGTCTATTTTAGTCCCTAAACTTTTAAAAGATAATCATTTTGGTTCTTATTATGTTACTTTTATACTTCAAATTCGTTTTGCCTAATGTTCATATCTAACTTATTTGACTTGAAATCATGCTCATGATAACAATCTAATACACATACTCAAAAGCTATGTCATTAATTTGTTAAAATTGTAATAAAAGTAAGGACCAAAATAGTCATTTTTTTAAAAGTTTAGGGACTAAAATAGATATTTTGAAAGTTTAGGGACCAAAATGAAACAAACTTGAAAATTTAGGGACTAAAATGAATAATTTGAAAGTTCAAGGACCAAAATAGAATAATCTTAAAAGTTTAGGGACCAAAATAGGATTTAAACCAATTGCTGCAAATATATGGTGTTTTCCTTTTTCTTTTGGGATATATGAAAGAGGAGAAGAGAAGGCAGAACCCCCAAATTAAAAACAATACACAATACAATTTTCAAAATCTCAAGATACCAATATTTCCAAGAATTAAAACAATACCGATTTACACCCCTCCACAATTTTCTAAATTTGGGTACTTTTGAAAAGGTCTGGTGAGACCACCCAAAGCCGCAAGAAGTTTGATTTCTTTGAAGCTTTCTTCTCATATGGAACTTTTACTATCAAAGATCTCCTTTTCCTCCCTTCTGACTTGATGATGTTGGACCAAAGAATCCTCGACCACGGGTGGTTGGCATCGACAGATGACTAA

mRNA sequence

ATGATCTTGCGGTTTATACTACTTTACTCTCCGTTAGGTTTGGAGGAGGAAGGGTTGCAGGTTTATGTGGGGTACTTGAAGAAGGTGATTGGGATGAGGTCTAGGCTTGAATTTGAGAATTTGGTGGAGTTGATGGAGAAACAATACCAAAATCATAATGTGAGTGGAGTGTCTGTGTTGATGGGTGAGGATGAGATTGTATATGCAATCTGTGAACTTCAGGAGGAGTGTGATTCACGTGGTGTTGGTGTACAAAAGACGGGGATAGAGATCGCAATAGCTTTGAATAACATGGACGTGAGCAGTGAATATGTTTTGAAACTCAAACATGAGATTGAGGAGCAATGTGCAGAGGTATCATACTTCACCTTGACATTCGATGCTGTAGAGGTGATTCAAGCCCTGAATTTCGAGAGATTGAAGATCTTTCTGAATCCAAATTTGTGTTTGGATGAGGTCGAGGCTCTCGCTTCGTCGGCGGGAGTAATCCGTTTCTCAAAATGCCTTAGGGGAGGTAACAAATCCGCGCACACTCTCGCGCGGGCGGTGGCTGGCTTTGTACCGAAGGCGATCTCTGAGTTTTCTAGAGTGGCCGTTGACGTTAGGGATGGTTTTGGTAGTTTTTGTGACCTTTCATCTTCGGAAGGACTATGCATTTGCAATTGCCATGAGGGGTCTTCACCACAACGAGAGTGGGATCCAAGGACTAAGCAGGACAACATAGCACAACACCAAACGTGGTCGGGAAGCGGACTATGGAGGGGAGTGAACCGAAGGGATTGGGCCACCCCGACCCAATCCCATGGTCAACCCTTCGTGTGGGCCGAGTTCTTTCCACCTCCGTTCGTCCCAACTGCCTCGGTCACATCTTCCCCGTCTTCAACAAATTCACTGCTGATGTCACGTGATGGTCAGGTGAGTTGTTTGGCCAGATTTTGGCATCAACAGTCTGGTGAGACCACCCAAAGCCGCAAGAAGTTTGATTTCTTTGAAGCTTTCTTCTCATATGGAACTTTTACTATCAAAGATCTCCTTTTCCTCCCTTCTGACTTGATGATGTTGGACCAAAGAATCCTCGACCACGGGTGGTTGGCATCGACAGATGACTAA

Coding sequence (CDS)

ATGATCTTGCGGTTTATACTACTTTACTCTCCGTTAGGTTTGGAGGAGGAAGGGTTGCAGGTTTATGTGGGGTACTTGAAGAAGGTGATTGGGATGAGGTCTAGGCTTGAATTTGAGAATTTGGTGGAGTTGATGGAGAAACAATACCAAAATCATAATGTGAGTGGAGTGTCTGTGTTGATGGGTGAGGATGAGATTGTATATGCAATCTGTGAACTTCAGGAGGAGTGTGATTCACGTGGTGTTGGTGTACAAAAGACGGGGATAGAGATCGCAATAGCTTTGAATAACATGGACGTGAGCAGTGAATATGTTTTGAAACTCAAACATGAGATTGAGGAGCAATGTGCAGAGGTATCATACTTCACCTTGACATTCGATGCTGTAGAGGTGATTCAAGCCCTGAATTTCGAGAGATTGAAGATCTTTCTGAATCCAAATTTGTGTTTGGATGAGGTCGAGGCTCTCGCTTCGTCGGCGGGAGTAATCCGTTTCTCAAAATGCCTTAGGGGAGGTAACAAATCCGCGCACACTCTCGCGCGGGCGGTGGCTGGCTTTGTACCGAAGGCGATCTCTGAGTTTTCTAGAGTGGCCGTTGACGTTAGGGATGGTTTTGGTAGTTTTTGTGACCTTTCATCTTCGGAAGGACTATGCATTTGCAATTGCCATGAGGGGTCTTCACCACAACGAGAGTGGGATCCAAGGACTAAGCAGGACAACATAGCACAACACCAAACGTGGTCGGGAAGCGGACTATGGAGGGGAGTGAACCGAAGGGATTGGGCCACCCCGACCCAATCCCATGGTCAACCCTTCGTGTGGGCCGAGTTCTTTCCACCTCCGTTCGTCCCAACTGCCTCGGTCACATCTTCCCCGTCTTCAACAAATTCACTGCTGATGTCACGTGATGGTCAGGTGAGTTGTTTGGCCAGATTTTGGCATCAACAGTCTGGTGAGACCACCCAAAGCCGCAAGAAGTTTGATTTCTTTGAAGCTTTCTTCTCATATGGAACTTTTACTATCAAAGATCTCCTTTTCCTCCCTTCTGACTTGATGATGTTGGACCAAAGAATCCTCGACCACGGGTGGTTGGCATCGACAGATGACTAA

Protein sequence

MILRFILLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEKQYQNHNVSGVSVLMGEDEIVYAICELQEECDSRGVGVQKTGIEIAIALNNMDVSSEYVLKLKHEIEEQCAEVSYFTLTFDAVEVIQALNFERLKIFLNPNLCLDEVEALASSAGVIRFSKCLRGGNKSAHTLARAVAGFVPKAISEFSRVAVDVRDGFGSFCDLSSSEGLCICNCHEGSSPQREWDPRTKQDNIAQHQTWSGSGLWRGVNRRDWATPTQSHGQPFVWAEFFPPPFVPTASVTSSPSSTNSLLMSRDGQVSCLARFWHQQSGETTQSRKKFDFFEAFFSYGTFTIKDLLFLPSDLMMLDQRILDHGWLASTDD
Homology
[Close]
BLAST of Lag0019012 vs. NCBI nr
Match: KAG6575305.1 (Conserved oligomeric Golgi complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013837.1 Conserved oligomeric Golgi complex subunit 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 130.2 bits (326), Expect = 3.7e-26
Identity = 74/118 (62.71%), Postives = 78/118 (66.10%), Query Frame = 0 

Query: 1   MILRFILLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEKQYQNHNVSG---- 60
           MILRFI LYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELME+QYQNHNV      
Sbjct: 207 MILRFIRLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEQQYQNHNVGSNQGQ 266

Query: 61  ------------------------VSVLMGEDEIVYAICELQEECDSRGVGVQKTGIE 91
                                   +  L GED IVYAICELQEECDSRG  + K  +E
Sbjct: 267 INFVGGLTNLFKDIVLAIEENDEILRSLCGEDGIVYAICELQEECDSRGSLILKKYVE 324

[Close]
BLAST of Lag0019012 vs. NCBI nr
Match: KAG6575305.1 (Conserved oligomeric Golgi complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013837.1 Conserved oligomeric Golgi complex subunit 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 73.6 bits (179), Expect = 4.1e-09
Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0 

Query: 81  GVGVQKTGIEIAIALNNMDVSSEYVLKLKHEIEEQCAEV 120
           GVGVQKTG EIA ALNNMDVSSEYVLKLKHEIEEQC EV
Sbjct: 505 GVGVQKTGTEIATALNNMDVSSEYVLKLKHEIEEQCTEV 543


HSP 2 Score: 130.2 bits (326), Expect = 3.7e-26
Identity = 74/118 (62.71%), Postives = 78/118 (66.10%), Query Frame = 0 

Query: 1   MILRFILLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEKQYQNHNVSG---- 60
           MILRFI LYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELME+QYQNHNV      
Sbjct: 207 MILRFIRLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEQQYQNHNVGSNQSQ 266

Query: 61  ------------------------VSVLMGEDEIVYAICELQEECDSRGVGVQKTGIE 91
                                   +  L GED IVYAICELQEECDSRG  + K  +E
Sbjct: 267 INFIGGLTNLFKDIVLAIEENDEILRSLCGEDGIVYAICELQEECDSRGSLILKKYVE 324

[Close]
BLAST of Lag0019012 vs. NCBI nr
Match: XP_022992144.1 (conserved oligomeric Golgi complex subunit 4-like [Cucurbita maxima])

HSP 1 Score: 73.6 bits (179), Expect = 4.1e-09
Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0 

Query: 81  GVGVQKTGIEIAIALNNMDVSSEYVLKLKHEIEEQCAEV 120
           GVGVQKTG EIA ALNNMDVSSEYVLKLKHEIEEQC EV
Sbjct: 505 GVGVQKTGTEIATALNNMDVSSEYVLKLKHEIEEQCTEV 543


HSP 2 Score: 130.2 bits (326), Expect = 3.7e-26
Identity = 74/118 (62.71%), Postives = 78/118 (66.10%), Query Frame = 0 

Query: 1   MILRFILLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEKQYQNHNVSG---- 60
           MILRFI LYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELME+QYQNHNV      
Sbjct: 207 MILRFIRLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEQQYQNHNVGSNQSQ 266

Query: 61  ------------------------VSVLMGEDEIVYAICELQEECDSRGVGVQKTGIE 91
                                   +  L GED IVYAICELQEECDSRG  + K  +E
Sbjct: 267 INFVGGLTNLFKDIVLAIEENDEILRSLCGEDGIVYAICELQEECDSRGSLILKKYVE 324

[Close]
BLAST of Lag0019012 vs. NCBI nr
Match: XP_023548525.1 (conserved oligomeric Golgi complex subunit 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 73.6 bits (179), Expect = 4.1e-09
Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0 

Query: 81  GVGVQKTGIEIAIALNNMDVSSEYVLKLKHEIEEQCAEV 120
           GVGVQKTG EIA ALNNMDVSSEYVLKLKHEIEEQC EV
Sbjct: 505 GVGVQKTGTEIATALNNMDVSSEYVLKLKHEIEEQCTEV 543


HSP 2 Score: 130.2 bits (326), Expect = 3.7e-26
Identity = 74/118 (62.71%), Postives = 78/118 (66.10%), Query Frame = 0 

Query: 1   MILRFILLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEKQYQNHNVSG---- 60
           MILRFI LYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELME+QYQNHNV      
Sbjct: 231 MILRFIRLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEQQYQNHNVGSNQNH 290

Query: 61  ------------------------VSVLMGEDEIVYAICELQEECDSRGVGVQKTGIE 91
                                   +  L GED IVYAICELQEECDSRG  + K  +E
Sbjct: 291 VNFVGCLTNLFKDIVLAIEENDEILRSLCGEDGIVYAICELQEECDSRGSLILKKYVE 348

[Close]
BLAST of Lag0019012 vs. NCBI nr
Match: XP_022159129.1 (conserved oligomeric Golgi complex subunit 4 [Momordica charantia])

HSP 1 Score: 75.1 bits (183), Expect = 1.4e-09
Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 81  GVGVQKTGIEIAIALNNMDVSSEYVLKLKHEIEEQCAEV 120
           GVGVQKTG EIA ALNNMDVSSEYVLKLKHEIEEQCAEV
Sbjct: 529 GVGVQKTGTEIATALNNMDVSSEYVLKLKHEIEEQCAEV 567


HSP 2 Score: 129.4 bits (324), Expect = 6.3e-26
Identity = 74/118 (62.71%), Postives = 78/118 (66.10%), Query Frame = 0 

Query: 1   MILRFILLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEKQYQNHNVSG---- 60
           MILRFI LYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELME+QYQNHNV      
Sbjct: 207 MILRFIRLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEQQYQNHNVGSNQNQ 266

Query: 61  ------------------------VSVLMGEDEIVYAICELQEECDSRGVGVQKTGIE 91
                                   +  L GED IVYAICELQEECDSRG  + K  +E
Sbjct: 267 INFVGALTNLFKDIVLAIEENDEILRSLCGEDGIVYAICELQEECDSRGSLILKKYME 324

[Close]
BLAST of Lag0019012 vs. ExPASy Swiss-Prot
Match: Q8L838 (Conserved oligomeric Golgi complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=COG4 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.5e-19
Identity = 53/99 (53.54%), Postives = 63/99 (63.64%), Query Frame = 0 

Query: 2   ILRFILLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEKQYQNHNVSG----- 61
           ILRF+ LYSPLG+E EGLQ+YVGYLKKVI +R R+E+EN+VELME+     N  G     
Sbjct: 203 ILRFVRLYSPLGMETEGLQLYVGYLKKVIALRGRMEYENVVELMEQGLGQVNFVGCLTNL 262

Query: 62  --------------VSVLMGEDEIVYAICELQEECDSRG 82
                         +  L GED + YAICELQEECD RG
Sbjct: 263 FKDIVMAIEENDEILRGLCGEDGVAYAICELQEECDLRG 301


HSP 2 Score: 67.8 bits (164), Expect = 3.0e-10
Identity = 31/39 (79.49%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 81  GVGVQKTGIEIAIALNNMDVSSEYVLKLKHEIEEQCAEV 120
           G+GV+ TG EIA ALNNMDVS EY+LKLKHEIEEQC EV
Sbjct: 492 GIGVENTGTEIATALNNMDVSCEYILKLKHEIEEQCTEV 530

[Close]
BLAST of Lag0019012 vs. ExPASy TrEMBL
Match: A0A6J1JWR6 (Component of oligomeric Golgi complex 4 OS=Cucurbita maxima OX=3661 GN=LOC111488568 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.8e-26
Identity = 74/118 (62.71%), Postives = 78/118 (66.10%), Query Frame = 0 

Query: 1   MILRFILLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEKQYQNHNVSG---- 60
           MILRFI LYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELME+QYQNHNV      
Sbjct: 207 MILRFIRLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEQQYQNHNVGSNQSQ 266

Query: 61  ------------------------VSVLMGEDEIVYAICELQEECDSRGVGVQKTGIE 91
                                   +  L GED IVYAICELQEECDSRG  + K  +E
Sbjct: 267 INFIGGLTNLFKDIVLAIEENDEILRSLCGEDGIVYAICELQEECDSRGSLILKKYVE 324

[Close]
BLAST of Lag0019012 vs. ExPASy TrEMBL
Match: A0A6J1JWR6 (Component of oligomeric Golgi complex 4 OS=Cucurbita maxima OX=3661 GN=LOC111488568 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-09
Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0 

Query: 81  GVGVQKTGIEIAIALNNMDVSSEYVLKLKHEIEEQCAEV 120
           GVGVQKTG EIA ALNNMDVSSEYVLKLKHEIEEQC EV
Sbjct: 505 GVGVQKTGTEIATALNNMDVSSEYVLKLKHEIEEQCTEV 543


HSP 2 Score: 130.2 bits (326), Expect = 1.8e-26
Identity = 74/118 (62.71%), Postives = 78/118 (66.10%), Query Frame = 0 

Query: 1   MILRFILLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEKQYQNHNVSG---- 60
           MILRFI LYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELME+QYQNHNV      
Sbjct: 231 MILRFIRLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEQQYQNHNVGSNQNH 290

Query: 61  ------------------------VSVLMGEDEIVYAICELQEECDSRGVGVQKTGIE 91
                                   +  L GED IVYAICELQEECDSRG  + K  +E
Sbjct: 291 VNFVGCLTNLFKDIVLAIEENDEILRSLCGEDGIVYAICELQEECDSRGSLILKKYVE 348

[Close]
BLAST of Lag0019012 vs. ExPASy TrEMBL
Match: A0A6J1E1G7 (Component of oligomeric Golgi complex 4 OS=Momordica charantia OX=3673 GN=LOC111025559 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.9e-10
Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 81  GVGVQKTGIEIAIALNNMDVSSEYVLKLKHEIEEQCAEV 120
           GVGVQKTG EIA ALNNMDVSSEYVLKLKHEIEEQCAEV
Sbjct: 529 GVGVQKTGTEIATALNNMDVSSEYVLKLKHEIEEQCAEV 567


HSP 2 Score: 129.4 bits (324), Expect = 3.1e-26
Identity = 74/118 (62.71%), Postives = 78/118 (66.10%), Query Frame = 0 

Query: 1   MILRFILLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEKQYQNHNVSG---- 60
           MILRFI LYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELME+QYQNHNV      
Sbjct: 207 MILRFIRLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEQQYQNHNVGSNQGQ 266

Query: 61  ------------------------VSVLMGEDEIVYAICELQEECDSRGVGVQKTGIE 91
                                   +  L GED IVYAICELQEECDSRG  + K  +E
Sbjct: 267 INFVGGLTNLFKDIVLAIEENDEILRSLCGEDGIVYAICELQEECDSRGSLILKKYME 324

[Close]
BLAST of Lag0019012 vs. ExPASy TrEMBL
Match: A0A6J1ETE4 (Component of oligomeric Golgi complex 4 OS=Cucurbita moschata OX=3662 GN=LOC111436338 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.4e-09
Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0 

Query: 81  GVGVQKTGIEIAIALNNMDVSSEYVLKLKHEIEEQCAEV 120
           GVGVQKTG EIA ALNNMDVSSEYVLKLKHEIEEQC EV
Sbjct: 505 GVGVQKTGNEIATALNNMDVSSEYVLKLKHEIEEQCTEV 543


HSP 2 Score: 128.6 bits (322), Expect = 5.2e-26
Identity = 72/109 (66.06%), Postives = 74/109 (67.89%), Query Frame = 0 

Query: 1   MILRFILLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEKQYQNHNVSG---- 60
           MILRFI LYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELME+QYQNHNV      
Sbjct: 207 MILRFIRLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEQQYQNHNVGSNQNQ 266

Query: 61  ------------------------VSVLMGEDEIVYAICELQEECDSRG 82
                                   +  L GED IVYAICELQEECDSRG
Sbjct: 267 INFVGGLTNLFKDIVLAIEENDEILRSLCGEDGIVYAICELQEECDSRG 315

[Close]
BLAST of Lag0019012 vs. ExPASy TrEMBL
Match: A0A5A7T8L4 (Component of oligomeric Golgi complex 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002460 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.9e-10
Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 81  GVGVQKTGIEIAIALNNMDVSSEYVLKLKHEIEEQCAEV 120
           GVGVQKTG EIA ALNNMDVSSEYVLKLKHEIEEQCAEV
Sbjct: 505 GVGVQKTGTEIATALNNMDVSSEYVLKLKHEIEEQCAEV 543


HSP 2 Score: 128.6 bits (322), Expect = 5.2e-26
Identity = 72/109 (66.06%), Postives = 74/109 (67.89%), Query Frame = 0 

Query: 1   MILRFILLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEKQYQNHNVSG---- 60
           MILRFI LYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELME+QYQNHNV      
Sbjct: 207 MILRFIRLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEQQYQNHNVGSNQNQ 266

Query: 61  ------------------------VSVLMGEDEIVYAICELQEECDSRG 82
                                   +  L GED IVYAICELQEECDSRG
Sbjct: 267 INFVGGLTNLFKDIVLAIEENDEILRSLCGEDGIVYAICELQEECDSRG 315

[Close]
BLAST of Lag0019012 vs. TAIR 10
Match: AT4G01400.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 26268 Blast hits to 8959 proteins in 289 species: Archae - 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants - 25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink). )

HSP 1 Score: 97.4 bits (241), Expect = 2.5e-20
Identity = 53/99 (53.54%), Postives = 63/99 (63.64%), Query Frame = 0 

Query: 2   ILRFILLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEKQYQNHNVSG----- 61
           ILRF+ LYSPLG+E EGLQ+YVGYLKKVI +R R+E+EN+VELME+     N  G     
Sbjct: 575 ILRFVRLYSPLGMETEGLQLYVGYLKKVIALRGRMEYENVVELMEQGLGQVNFVGCLTNL 634

Query: 62  --------------VSVLMGEDEIVYAICELQEECDSRG 82
                         +  L GED + YAICELQEECD RG
Sbjct: 635 FKDIVMAIEENDEILRGLCGEDGVAYAICELQEECDLRG 673


HSP 2 Score: 67.8 bits (164), Expect = 2.1e-11
Identity = 31/39 (79.49%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 81  GVGVQKTGIEIAIALNNMDVSSEYVLKLKHEIEEQCAEV 120
           G+GV+ TG EIA ALNNMDVS EY+LKLKHEIEEQC EV
Sbjct: 864 GIGVENTGTEIATALNNMDVSCEYILKLKHEIEEQCTEV 902

[Close]
BLAST of Lag0019012 vs. TAIR 10
Match: AT4G01400.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167); Has 465 Blast hits to 425 proteins in 199 species: Archae - 0; Bacteria - 3; Metazoa - 153; Fungi - 166; Plants - 45; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). )

HSP 1 Score: 97.4 bits (241), Expect = 2.5e-20
Identity = 53/99 (53.54%), Postives = 63/99 (63.64%), Query Frame = 0 

Query: 2   ILRFILLYSPLGLEEEGLQVYVGYLKKVIGMRSRLEFENLVELMEKQYQNHNVSG----- 61
           ILRF+ LYSPLG+E EGLQ+YVGYLKKVI +R R+E+EN+VELME+     N  G     
Sbjct: 203 ILRFVRLYSPLGMETEGLQLYVGYLKKVIALRGRMEYENVVELMEQGLGQVNFVGCLTNL 262

Query: 62  --------------VSVLMGEDEIVYAICELQEECDSRG 82
                         +  L GED + YAICELQEECD RG
Sbjct: 263 FKDIVMAIEENDEILRGLCGEDGVAYAICELQEECDLRG 301


HSP 2 Score: 67.8 bits (164), Expect = 2.1e-11
Identity = 31/39 (79.49%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 81  GVGVQKTGIEIAIALNNMDVSSEYVLKLKHEIEEQCAEV 120
           G+GV+ TG EIA ALNNMDVS EY+LKLKHEIEEQC EV
Sbjct: 492 GIGVENTGTEIATALNNMDVSCEYILKLKHEIEEQCTEV 530

The following BLAST results are available for this feature:
BLAST of Lag0019012 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6575305.13.7e-2662.71Conserved oligomeric Golgi complex subunit 4, partial [Cucurbita argyrosperma su... [more]
KAG6575305.14.1e-0992.31Conserved oligomeric Golgi complex subunit 4, partial [Cucurbita argyrosperma su... [more]
XP_022992144.14.1e-0992.31conserved oligomeric Golgi complex subunit 4-like [Cucurbita maxima][more]
XP_023548525.14.1e-0992.31conserved oligomeric Golgi complex subunit 4-like [Cucurbita pepo subsp. pepo][more]
XP_022159129.11.4e-0994.87conserved oligomeric Golgi complex subunit 4 [Momordica charantia][more]

Pages

BLAST of Lag0019012 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L8383.5e-1953.54Conserved oligomeric Golgi complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=... [more]
BLAST of Lag0019012 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JWR61.8e-2662.71Component of oligomeric Golgi complex 4 OS=Cucurbita maxima OX=3661 GN=LOC111488... [more]
A0A6J1JWR62.0e-0992.31Component of oligomeric Golgi complex 4 OS=Cucurbita maxima OX=3661 GN=LOC111488... [more]
A0A6J1E1G76.9e-1094.87Component of oligomeric Golgi complex 4 OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A6J1ETE43.4e-0992.31Component of oligomeric Golgi complex 4 OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A5A7T8L46.9e-1094.87Component of oligomeric Golgi complex 4 OS=Cucumis melo var. makuwa OX=1194695 G... [more]

Pages

BLAST of Lag0019012 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G01400.12.5e-2053.54FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT4G01400.22.5e-2053.54FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.1060coord: 78..134
e-value: 7.0E-7
score: 31.3
NoneNo IPR availablePANTHERPTHR24016CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4coord: 2..85
NoneNo IPR availablePANTHERPTHR24016:SF0CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4coord: 2..85
NoneNo IPR availablePANTHERPTHR24016CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4coord: 84..135
NoneNo IPR availablePANTHERPTHR24016:SF0CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4coord: 84..135

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0019012.1Lag0019012.1mRNA