Lag0018933 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTATTATTCGAGGAACCCAAAGGCGGCATCTGCAGCGAAGACATGGAGTTCAGGTACGTTTCTATATGGACTCACTTTCATAAATTACCTTATGCTTGTTTTACTACGGCATCTACAGAAGCGATTGGTAGTCTCCTTGGGAAGGTTGAAAAAGTGGATATAGGGGCTGAATCAGATTCGGAATGGGGTCGGTCATTGAGAGTTAAAATTCATATTGATGTCCAGCGACCTCTAAAACGCGGGATATTTTTAAAATCAGGGAGTAATGGAGAAGATAAATGGATCCCTGTTACGTATGAGAAGCTTTCGGATTTTTGTTATGGGTGTGGACGATTGGGGCACACTATTAAAGAATGTGAGGAACAAATCAGCTCTGCCGAAGAGGAACTTCTATACGGTGCTTTTCTTCGTGAACCAGTCCGTCTAAGGCACGAGGAAAGAGGACCTCCAACAGAAAATCTTCAAGGTAGAGGTAGGGGACGGGGAGCTTTTGGAGGACGAGGAAGATGGCGATATGAACACTTTGATGATGAAGAGGATGGAGAAACAAAATCCCATGAACAATTTGTGGAACAACCAAAACGGGTGGCGCCCCACCATACGCCGCCGTCTAGCGGTGGATCTCAGTCGGAGAGGACTAAGTCAAGCAAGGAAACGGTAGGATTCACAATTAAGGAAGGAGATCCTAGTAACGGAAAAATAATTCAAGAGGGTGGCGTTAGTTCAGGGAATAATGGGGGGTCAGAAGGAAAAAACGGAAATCAAGGAATCATAGGTGATAAATGCTTAAGCGGTGATAATTCTCAAATTTGTTCCAACGGTTCTACAAGTCAAAGTTCACAAATGGAAATAGATGCAAAACCTCACGTGGTAATAGATGACAGCTTGGAACAAAAGAACCAAGTGATAAATGTTAATGGGATCCAAAATGATGGGCCATCTATTGGGCTTACTCCTAAAGAGCCAGTAAAGGCCAAAGTATGGAAAAGGCATATACGAGAAAACAAGGCTGCAAGCAATAACTTAAAAAACCCATCGGATACTCAGCAGATGAGTGGGTTGAAACATAAGGCTGAGTGTGATATTGAAGGTGTTAAGGAAGCTCATTAG ATGCTATTATTCGAGGAACCCAAAGGCGGCATCTGCAGCGAAGACATGGAGTTCAGGTACGTTTCTATATGGACTCACTTTCATAAATTACCTTATGCTTGTTTTACTACGGCATCTACAGAAGCGATTGGTAGTCTCCTTGGGAAGGTTGAAAAAGTGGATATAGGGGCTGAATCAGATTCGGAATGGGGTCGGTCATTGAGAGTTAAAATTCATATTGATGTCCAGCGACCTCTAAAACGCGGGATATTTTTAAAATCAGGGAGTAATGGAGAAGATAAATGGATCCCTGTTACGTATGAGAAGCTTTCGGATTTTTGTTATGGGTGTGGACGATTGGGGCACACTATTAAAGAATGTGAGGAACAAATCAGCTCTGCCGAAGAGGAACTTCTATACGGTGCTTTTCTTCGTGAACCAGTCCGTCTAAGGCACGAGGAAAGAGGACCTCCAACAGAAAATCTTCAAGGTAGAGGTAGGGGACGGGGAGCTTTTGGAGGACGAGGAAGATGGCGATATGAACACTTTGATGATGAAGAGGATGGAGAAACAAAATCCCATGAACAATTTGTGGAACAACCAAAACGGGTGGCGCCCCACCATACGCCGCCGTCTAGCGGTGGATCTCAGTCGGAGAGGACTAAGTCAAGCAAGGAAACGGTAGGATTCACAATTAAGGAAGGAGATCCTAGTAACGGAAAAATAATTCAAGAGGGTGGCGTTAGTTCAGGGAATAATGGGGGGTCAGAAGGAAAAAACGGAAATCAAGGAATCATAGGTGATAAATGCTTAAGCGGTGATAATTCTCAAATTTGTTCCAACGGTTCTACAAGTCAAAGTTCACAAATGGAAATAGATGCAAAACCTCACGTGGTAATAGATGACAGCTTGGAACAAAAGAACCAAGTGATAAATGTTAATGGGATCCAAAATGATGGGCCATCTATTGGGCTTACTCCTAAAGAGCCAGTAAAGGCCAAAGTATGGAAAAGGCATATACGAGAAAACAAGGCTGCAAGCAATAACTTAAAAAACCCATCGGATACTCAGCAGATGAGTGGGTTGAAACATAAGGCTGAGTGTGATATTGAAGGTGTTAAGGAAGCTCATTAG ATGCTATTATTCGAGGAACCCAAAGGCGGCATCTGCAGCGAAGACATGGAGTTCAGGTACGTTTCTATATGGACTCACTTTCATAAATTACCTTATGCTTGTTTTACTACGGCATCTACAGAAGCGATTGGTAGTCTCCTTGGGAAGGTTGAAAAAGTGGATATAGGGGCTGAATCAGATTCGGAATGGGGTCGGTCATTGAGAGTTAAAATTCATATTGATGTCCAGCGACCTCTAAAACGCGGGATATTTTTAAAATCAGGGAGTAATGGAGAAGATAAATGGATCCCTGTTACGTATGAGAAGCTTTCGGATTTTTGTTATGGGTGTGGACGATTGGGGCACACTATTAAAGAATGTGAGGAACAAATCAGCTCTGCCGAAGAGGAACTTCTATACGGTGCTTTTCTTCGTGAACCAGTCCGTCTAAGGCACGAGGAAAGAGGACCTCCAACAGAAAATCTTCAAGGTAGAGGTAGGGGACGGGGAGCTTTTGGAGGACGAGGAAGATGGCGATATGAACACTTTGATGATGAAGAGGATGGAGAAACAAAATCCCATGAACAATTTGTGGAACAACCAAAACGGGTGGCGCCCCACCATACGCCGCCGTCTAGCGGTGGATCTCAGTCGGAGAGGACTAAGTCAAGCAAGGAAACGGTAGGATTCACAATTAAGGAAGGAGATCCTAGTAACGGAAAAATAATTCAAGAGGGTGGCGTTAGTTCAGGGAATAATGGGGGGTCAGAAGGAAAAAACGGAAATCAAGGAATCATAGGTGATAAATGCTTAAGCGGTGATAATTCTCAAATTTGTTCCAACGGTTCTACAAGTCAAAGTTCACAAATGGAAATAGATGCAAAACCTCACGTGGTAATAGATGACAGCTTGGAACAAAAGAACCAAGTGATAAATGTTAATGGGATCCAAAATGATGGGCCATCTATTGGGCTTACTCCTAAAGAGCCAGTAAAGGCCAAAGTATGGAAAAGGCATATACGAGAAAACAAGGCTGCAAGCAATAACTTAAAAAACCCATCGGATACTCAGCAGATGAGTGGGTTGAAACATAAGGCTGAGTGTGATATTGAAGGTGTTAAGGAAGCTCATTAG MLLFEEPKGGICSEDMEFRYVSIWTHFHKLPYACFTTASTEAIGSLLGKVEKVDIGAESDSEWGRSLRVKIHIDVQRPLKRGIFLKSGSNGEDKWIPVTYEKLSDFCYGCGRLGHTIKECEEQISSAEEELLYGAFLREPVRLRHEERGPPTENLQGRGRGRGAFGGRGRWRYEHFDDEEDGETKSHEQFVEQPKRVAPHHTPPSSGGSQSERTKSSKETVGFTIKEGDPSNGKIIQEGGVSSGNNGGSEGKNGNQGIIGDKCLSGDNSQICSNGSTSQSSQMEIDAKPHVVIDDSLEQKNQVINVNGIQNDGPSIGLTPKEPVKAKVWKRHIRENKAASNNLKNPSDTQQMSGLKHKAECDIEGVKEAH Homology
BLAST of Lag0018933 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia]) HSP 1 Score: 124.0 bits (310), Expect = 2.7e-24 Identity = 74/190 (38.95%), Postives = 109/190 (57.37%), Query Frame = 0
BLAST of Lag0018933 vs. NCBI nr
Match: KAG5542538.1 (hypothetical protein RHGRI_022172 [Rhododendron griersonianum]) HSP 1 Score: 112.1 bits (279), Expect = 1.0e-20 Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 0
BLAST of Lag0018933 vs. NCBI nr
Match: KAG5556475.1 (hypothetical protein RHGRI_006921 [Rhododendron griersonianum]) HSP 1 Score: 112.1 bits (279), Expect = 1.0e-20 Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 0
BLAST of Lag0018933 vs. NCBI nr
Match: KAG5515315.1 (hypothetical protein RHGRI_036380 [Rhododendron griersonianum]) HSP 1 Score: 112.1 bits (279), Expect = 1.0e-20 Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 0
BLAST of Lag0018933 vs. NCBI nr
Match: XP_042979975.1 (uncharacterized protein LOC122310162 [Carya illinoinensis]) HSP 1 Score: 110.9 bits (276), Expect = 2.3e-20 Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 0
BLAST of Lag0018933 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.3e-24 Identity = 74/190 (38.95%), Postives = 109/190 (57.37%), Query Frame = 0
BLAST of Lag0018933 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.9e-20 Identity = 53/139 (38.13%), Postives = 75/139 (53.96%), Query Frame = 0
BLAST of Lag0018933 vs. ExPASy TrEMBL
Match: A0A5C7GZQ4 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_025894 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.5e-20 Identity = 50/141 (35.46%), Postives = 87/141 (61.70%), Query Frame = 0
BLAST of Lag0018933 vs. ExPASy TrEMBL
Match: A0A5C7HBH6 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019455 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 9.6e-20 Identity = 53/166 (31.93%), Postives = 90/166 (54.22%), Query Frame = 0
BLAST of Lag0018933 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 9.6e-20 Identity = 53/164 (32.32%), Postives = 91/164 (55.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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