Lag0018915 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0018915
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionABC transporter G family member 9
Locationchr5: 36318590 .. 36320228 (+)
RNA-Seq ExpressionLag0018915
SyntenyLag0018915
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGACAAGTTGGAGTCAAAGCTACAACTGATGAGCATTGGGTTGAAAGATGGATCAGAAGACAGGGCTTTAGGCGTTGGTCCACAACTACAAGATAAGGTTTCAATTCTCTCTCTCTTCTCTTATTTCTATGCAAGTTTCACTCCCATTATATACTTTATTTCTCTGTCTATTGTGTTTAACAAAATGTATATAGCAATGATATGACGAGTATGTTTGGAAGTGCTTTTGACTGGGTTAAAGAATTTTTGCTAGACTGAACATATTTCTTGCTTGAAATTAATCATTTTTGAAAAAGATTTACGAGTGTTTTTTAAAAAAGTCAAAAGCAAAGTGTTTTATGAAAAATCACTTGTAGAGTATTTTTGACTAGTGTGATGGTCAAGGAAGTGCCTAGAAGAACTTTTAATAGTGTAGAACCAAACACTAAACTGATTTGTCATGAATTACTTATTACAAAAATATATGTAAGCAAAGTGTTTTTGCAAAAATTACTTATTTGAAAAAACAGTCCCCAAACAAACTCTAAAAGATTAGCTAAAGTTTTAAGAAGAGAAGAGTTTGGTAACGGACAATATTTTCATTAGTGCAAAAGCTTTGAATGGAGTCTATATATTGTGTTAATGTGTTAATGTGGTAGAGATAAGAAAGATACATTACCCCCACAAACTTAGGATCCAATTTTTGGATGAGAGAAGAATGCTAGAATAGCAACAATCTTAGGCACACACAAAATAAGAACAAGACAGGGATAAAGTTGCAATTCAAATAATCATTGTGAAACAGTCCAAATGTTTCAAACTTTTTTTTTCTGATAAAGAAGAAAACTATGGGGGGAGGGGATACTAGCCAACATTTCTATATACTAAATTTTAGGGAAGAAAAAAATTAGTTATGCACACCAAGAACTAGAAACTTGCTTCATATGATGATCATGTCCAACATGTTATTAATTAACAAACTTTGTTTTGCAGATGTGTTAACAACAACCTTGCATTTTCAGAATGGGCTGCTCTACTTCTCAACAATCTATTGGGGTATCTTCCCTTCTATTTCAAGCCATTAGCGCCCTCCCAAAAGAAAGAATGATGCTTGAAAAAGAAAGATCCTTAGGAATGTACAGGCTCTCATCGTACTTCATCTAAAGGTCCACAAGCAAGCCTCCCAGTGGAGCTCGGTCTTTCCACCATAATCTATTGGATGGCGAGCTTGAAACGCTTCACCACAAGCTTCTTTGCCACTCTATTCTCTCAACTCCTCAGCGTTTTAGTGTCCCAAAGGCTCTAGTTTGGCCGTTGGCAGCCTTGTTTTGGACCAAAGTTCAACCACCATACTTGGTTCAGTCATCATGCTTTATTTCCATGTAATGTCCGGGTATTTTGTCCAGCATGTTCTGCAGTTTATTGCTTGGACCAAGTACCTTTCTATTGGTACGCACAGGCTTTTACTGATGTCTCAATATGAAGCTACTGATACGGGCAATGGAGGGCTATGGGAAGCTGGAGAGTTTCCTGCAATAAAGCAAGTGGGTCTCCATGGGAAAGCCACCGGCGATTTTGCTTTGGTTGTTGTGCTTGTTGGATATCGTCTTGTTGCTTACATTGCTTTGATGAGAATTGGAATCACCAAGGACTAG

mRNA sequence

ATGGCTGACAAGTTGGAGTCAAAGCTACAACTGATGAGCATTGGGTTGAAAGATGGATCAGAAGACAGGGCTTTAGGCGTTGGTCCACAACTACAAGATAAGGTTTCAATTCTCTCTCTCTTCTCTTATTTCTATGCAAGTTTCACTCCCATTATATACTTTATTTCTCTGTCTATTGTGTTTAACAAAATATGTGTTAACAACAACCTTGCATTTTCAGAATGGGCTGCTCTACTTCTCAACAATCTATTGGGGTCCACAAGCAAGCCTCCCAGTGGAGCTCGGTCTTTCCACCATAATCTATTGGATGGCGAGCTTGAAACGCTTCACCACAAGCTTCTTTGCCACTCTATTCTCTCAACTCCTCAGCGTTTTAGTGTCCCAAAGGCTCTAGTTTGGCCGTTGGCAGCCTTGTTTTGGACCAAAGTTCAACCACCATACTTGGTTCAGTCATCATGCTTTATTTCCATGCTTTTACTGATGTCTCAATATGAAGCTACTGATACGGGCAATGGAGGGCTATGGGAAGCTGGAGAGTTTCCTGCAATAAAGCAAGTGGGTCTCCATGGGAAAGCCACCGGCGATTTTGCTTTGGTTGTTGTGCTTGTTGGATATCGTCTTGTTGCTTACATTGCTTTGATGAGAATTGGAATCACCAAGGACTAG

Coding sequence (CDS)

ATGGCTGACAAGTTGGAGTCAAAGCTACAACTGATGAGCATTGGGTTGAAAGATGGATCAGAAGACAGGGCTTTAGGCGTTGGTCCACAACTACAAGATAAGGTTTCAATTCTCTCTCTCTTCTCTTATTTCTATGCAAGTTTCACTCCCATTATATACTTTATTTCTCTGTCTATTGTGTTTAACAAAATATGTGTTAACAACAACCTTGCATTTTCAGAATGGGCTGCTCTACTTCTCAACAATCTATTGGGGTCCACAAGCAAGCCTCCCAGTGGAGCTCGGTCTTTCCACCATAATCTATTGGATGGCGAGCTTGAAACGCTTCACCACAAGCTTCTTTGCCACTCTATTCTCTCAACTCCTCAGCGTTTTAGTGTCCCAAAGGCTCTAGTTTGGCCGTTGGCAGCCTTGTTTTGGACCAAAGTTCAACCACCATACTTGGTTCAGTCATCATGCTTTATTTCCATGCTTTTACTGATGTCTCAATATGAAGCTACTGATACGGGCAATGGAGGGCTATGGGAAGCTGGAGAGTTTCCTGCAATAAAGCAAGTGGGTCTCCATGGGAAAGCCACCGGCGATTTTGCTTTGGTTGTTGTGCTTGTTGGATATCGTCTTGTTGCTTACATTGCTTTGATGAGAATTGGAATCACCAAGGACTAG

Protein sequence

MADKLESKLQLMSIGLKDGSEDRALGVGPQLQDKVSILSLFSYFYASFTPIIYFISLSIVFNKICVNNNLAFSEWAALLLNNLLGSTSKPPSGARSFHHNLLDGELETLHHKLLCHSILSTPQRFSVPKALVWPLAALFWTKVQPPYLVQSSCFISMLLLMSQYEATDTGNGGLWEAGEFPAIKQVGLHGKATGDFALVVVLVGYRLVAYIALMRIGITKD
Homology
[Close]
BLAST of Lag0018915 vs. NCBI nr
Match: XP_022929301.1 (ABC transporter G family member 9 [Cucurbita moschata])

HSP 1 Score: 89.0 bits (219), Expect = 5.7e-14
Identity = 51/86 (59.30%), Postives = 61/86 (70.93%), Query Frame = 0 

Query: 140 WTKVQPPYLVQSSCFISMLLLMSQYEATDT----GNG-GLWEAGEFPAIKQVGLHGKATG 199
           WTK      +    +   LLL+SQY+ATDT    G+G G+ E GEFPAIKQ+GLHGK T 
Sbjct: 541 WTK-----YISIGTYTYKLLLISQYKATDTYLCPGHGVGVCEVGEFPAIKQMGLHGKTTA 600

Query: 200 DFALVVVLVGYRLVAYIALMRIGITK 221
             AL+ +LVGYRLVAYIALMRIG+TK
Sbjct: 601 ILALMAMLVGYRLVAYIALMRIGVTK 621

[Close]
BLAST of Lag0018915 vs. NCBI nr
Match: XP_023551984.1 (ABC transporter G family member 9 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-13
Identity = 51/86 (59.30%), Postives = 60/86 (69.77%), Query Frame = 0 

Query: 140 WTKVQPPYLVQSSCFISMLLLMSQYEATDT----GNG-GLWEAGEFPAIKQVGLHGKATG 199
           WTK      +    +   LLLMSQY+ATDT    G+G G+ E GEFPAIKQ+GLHGK T 
Sbjct: 542 WTK-----YISIGTYTYKLLLMSQYKATDTYLCPGHGVGVCEVGEFPAIKQMGLHGKITA 601

Query: 200 DFALVVVLVGYRLVAYIALMRIGITK 221
             AL+ +LVGYRLVAYIALMRIG+ K
Sbjct: 602 ILALMAMLVGYRLVAYIALMRIGVIK 622

[Close]
BLAST of Lag0018915 vs. NCBI nr
Match: XP_022985044.1 (ABC transporter G family member 9-like [Cucurbita maxima])

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-13
Identity = 50/86 (58.14%), Postives = 61/86 (70.93%), Query Frame = 0 

Query: 140 WTKVQPPYLVQSSCFISMLLLMSQYEATDT----GNG-GLWEAGEFPAIKQVGLHGKATG 199
           WTK      +    +   LLL+SQY+ATDT    G+G G+ E GEFPAI+Q+GLHGK T 
Sbjct: 543 WTK-----YISIGTYTYKLLLISQYKATDTYLCPGHGVGVCEVGEFPAIQQMGLHGKTTA 602

Query: 200 DFALVVVLVGYRLVAYIALMRIGITK 221
             AL+ +LVGYRLVAYIALMRIG+TK
Sbjct: 603 ILALMAMLVGYRLVAYIALMRIGVTK 623

[Close]
BLAST of Lag0018915 vs. NCBI nr
Match: KAG6577381.1 (ABC transporter G family member 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-13
Identity = 50/86 (58.14%), Postives = 61/86 (70.93%), Query Frame = 0 

Query: 140 WTKVQPPYLVQSSCFISMLLLMSQYEATDT----GNG-GLWEAGEFPAIKQVGLHGKATG 199
           WTK      +    +   LLL+SQY+ATDT    G+G G+ + GEFPAIKQ+GLHGK T 
Sbjct: 541 WTK-----YISIGTYTYKLLLISQYKATDTYLCPGHGVGVCKVGEFPAIKQMGLHGKTTA 600

Query: 200 DFALVVVLVGYRLVAYIALMRIGITK 221
             AL+ +LVGYRLVAYIALMRIG+TK
Sbjct: 601 ILALMAMLVGYRLVAYIALMRIGVTK 621

[Close]
BLAST of Lag0018915 vs. NCBI nr
Match: XP_022142763.1 (ABC transporter G family member 9-like [Momordica charantia])

HSP 1 Score: 86.3 bits (212), Expect = 3.7e-13
Identity = 49/67 (73.13%), Postives = 53/67 (79.10%), Query Frame = 0 

Query: 158 LLLMSQYEATDT----GNGGLWEAGEFPAIKQVGLHGKATGDFALVVVLVGYRLVAYIAL 217
           LLLMSQ+EAT+T     NGG  E GEFPAIKQVGL  K T   ALVV+LVGYRLVAYIAL
Sbjct: 558 LLLMSQFEATETYPCSSNGGHCEIGEFPAIKQVGLDRKLTTVVALVVMLVGYRLVAYIAL 617

Query: 218 MRIGITK 221
           MRIG+TK
Sbjct: 618 MRIGVTK 624

[Close]
BLAST of Lag0018915 vs. ExPASy Swiss-Prot
Match: Q9C6W5 (ABC transporter G family member 14 OS=Arabidopsis thaliana OX=3702 GN=ABCG14 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.2e-05
Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 0 

Query: 131 LVWPLAALFWTKVQPPYLV-----QSSCFISMLLLMSQYEATD--TGNGGLW-EAGEFPA 190
           LV+ +A  ++ +  PP++V       S +   LLL  QY   D    + G+W   G+FPA
Sbjct: 552 LVFLIAGGYYVQQIPPFIVWLKYLSYSYYCYKLLLGIQYTDDDYYECSKGVWCRVGDFPA 611

Query: 191 IKQVGLHGKATGDFALVVVLVGYRLVAYIALMRI 217
           IK +GL+      F + V+LVGYRL+AY+AL R+
Sbjct: 612 IKSMGLNNLWIDVFVMGVMLVGYRLMAYMALHRV 645

[Close]
BLAST of Lag0018915 vs. ExPASy Swiss-Prot
Match: Q9SZR9 (ABC transporter G family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCG9 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 3.2e-04
Identity = 29/68 (42.65%), Postives = 38/68 (55.88%), Query Frame = 0 

Query: 158 LLLMSQYEATDT----GNGGL-WEAGEFPAIKQVGLHGKATGDFALVVVLVGYRLVAYIA 217
           LL++ QY A +      NG L    G+F  IK +G +       AL  +LV YR++AYIA
Sbjct: 569 LLILGQYTANELYPCGDNGKLRCHVGDFEGIKHIGFNSGLVSALALTAMLVVYRVIAYIA 628

Query: 218 LMRIGITK 221
           L RIG TK
Sbjct: 629 LTRIGKTK 636

[Close]
BLAST of Lag0018915 vs. ExPASy TrEMBL
Match: A0A6J1EMR5 (ABC transporter G family member 9 OS=Cucurbita moschata OX=3662 GN=LOC111435925 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.7e-14
Identity = 51/86 (59.30%), Postives = 61/86 (70.93%), Query Frame = 0 

Query: 140 WTKVQPPYLVQSSCFISMLLLMSQYEATDT----GNG-GLWEAGEFPAIKQVGLHGKATG 199
           WTK      +    +   LLL+SQY+ATDT    G+G G+ E GEFPAIKQ+GLHGK T 
Sbjct: 541 WTK-----YISIGTYTYKLLLISQYKATDTYLCPGHGVGVCEVGEFPAIKQMGLHGKTTA 600

Query: 200 DFALVVVLVGYRLVAYIALMRIGITK 221
             AL+ +LVGYRLVAYIALMRIG+TK
Sbjct: 601 ILALMAMLVGYRLVAYIALMRIGVTK 621

[Close]
BLAST of Lag0018915 vs. ExPASy TrEMBL
Match: A0A6J1JC66 (ABC transporter G family member 9-like OS=Cucurbita maxima OX=3661 GN=LOC111483135 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 8.0e-14
Identity = 50/86 (58.14%), Postives = 61/86 (70.93%), Query Frame = 0 

Query: 140 WTKVQPPYLVQSSCFISMLLLMSQYEATDT----GNG-GLWEAGEFPAIKQVGLHGKATG 199
           WTK      +    +   LLL+SQY+ATDT    G+G G+ E GEFPAI+Q+GLHGK T 
Sbjct: 543 WTK-----YISIGTYTYKLLLISQYKATDTYLCPGHGVGVCEVGEFPAIQQMGLHGKTTA 602

Query: 200 DFALVVVLVGYRLVAYIALMRIGITK 221
             AL+ +LVGYRLVAYIALMRIG+TK
Sbjct: 603 ILALMAMLVGYRLVAYIALMRIGVTK 623

[Close]
BLAST of Lag0018915 vs. ExPASy TrEMBL
Match: A0A6J1CP36 (ABC transporter G family member 9-like OS=Momordica charantia OX=3673 GN=LOC111012802 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.8e-13
Identity = 49/67 (73.13%), Postives = 53/67 (79.10%), Query Frame = 0 

Query: 158 LLLMSQYEATDT----GNGGLWEAGEFPAIKQVGLHGKATGDFALVVVLVGYRLVAYIAL 217
           LLLMSQ+EAT+T     NGG  E GEFPAIKQVGL  K T   ALVV+LVGYRLVAYIAL
Sbjct: 558 LLLMSQFEATETYPCSSNGGHCEIGEFPAIKQVGLDRKLTTVVALVVMLVGYRLVAYIAL 617

Query: 218 MRIGITK 221
           MRIG+TK
Sbjct: 618 MRIGVTK 624

[Close]
BLAST of Lag0018915 vs. ExPASy TrEMBL
Match: A0A6J1CMG2 (ABC transporter G family member 9-like OS=Momordica charantia OX=3673 GN=LOC111012812 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 8.8e-13
Identity = 47/71 (66.20%), Postives = 54/71 (76.06%), Query Frame = 0 

Query: 154 FISMLLLMSQYEATDT----GNGGLWEAGEFPAIKQVGLHGKATGDFALVVVLVGYRLVA 213
           F   LLLMSQ+EA DT      GG+ + G+FPAIKQ+GL GKAT    LVV+LVGYRLVA
Sbjct: 523 FTYKLLLMSQFEADDTYPCPRLGGVCKVGDFPAIKQMGLRGKATTVLGLVVMLVGYRLVA 582

Query: 214 YIALMRIGITK 221
           YIALMRIG+TK
Sbjct: 583 YIALMRIGVTK 593

[Close]
BLAST of Lag0018915 vs. ExPASy TrEMBL
Match: A0A6J1CP45 (ABC transporter G family member 9-like OS=Momordica charantia OX=3673 GN=LOC111012811 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.0e-12
Identity = 46/71 (64.79%), Postives = 54/71 (76.06%), Query Frame = 0 

Query: 154 FISMLLLMSQYEATDT----GNGGLWEAGEFPAIKQVGLHGKATGDFALVVVLVGYRLVA 213
           F   LLL+SQ+EA DT      GG+ + G+FPAIKQ+GL GKAT    LVV+LVGYRLVA
Sbjct: 271 FTYKLLLLSQFEADDTYPCSRLGGVCKVGDFPAIKQMGLRGKATTVLGLVVMLVGYRLVA 330

Query: 214 YIALMRIGITK 221
           YIALMRIG+TK
Sbjct: 331 YIALMRIGVTK 341

[Close]
BLAST of Lag0018915 vs. TAIR 10
Match: AT1G31770.1 (ATP-binding cassette 14 )

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06
Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 0 

Query: 131 LVWPLAALFWTKVQPPYLV-----QSSCFISMLLLMSQYEATD--TGNGGLW-EAGEFPA 190
           LV+ +A  ++ +  PP++V       S +   LLL  QY   D    + G+W   G+FPA
Sbjct: 552 LVFLIAGGYYVQQIPPFIVWLKYLSYSYYCYKLLLGIQYTDDDYYECSKGVWCRVGDFPA 611

Query: 191 IKQVGLHGKATGDFALVVVLVGYRLVAYIALMRI 217
           IK +GL+      F + V+LVGYRL+AY+AL R+
Sbjct: 612 IKSMGLNNLWIDVFVMGVMLVGYRLMAYMALHRV 645

[Close]
BLAST of Lag0018915 vs. TAIR 10
Match: AT4G27420.1 (ABC-2 type transporter family protein )

HSP 1 Score: 47.0 bits (110), Expect = 2.3e-05
Identity = 29/68 (42.65%), Postives = 38/68 (55.88%), Query Frame = 0 

Query: 158 LLLMSQYEATDT----GNGGL-WEAGEFPAIKQVGLHGKATGDFALVVVLVGYRLVAYIA 217
           LL++ QY A +      NG L    G+F  IK +G +       AL  +LV YR++AYIA
Sbjct: 569 LLILGQYTANELYPCGDNGKLRCHVGDFEGIKHIGFNSGLVSALALTAMLVVYRVIAYIA 628

Query: 218 LMRIGITK 221
           L RIG TK
Sbjct: 629 LTRIGKTK 636

The following BLAST results are available for this feature:
BLAST of Lag0018915 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022929301.15.7e-1459.30ABC transporter G family member 9 [Cucurbita moschata][more]
XP_023551984.11.3e-1359.30ABC transporter G family member 9 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022985044.11.7e-1358.14ABC transporter G family member 9-like [Cucurbita maxima][more]
KAG6577381.11.7e-1358.14ABC transporter G family member 9, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022142763.13.7e-1373.13ABC transporter G family member 9-like [Momordica charantia][more]
BLAST of Lag0018915 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C6W52.2e-0538.30ABC transporter G family member 14 OS=Arabidopsis thaliana OX=3702 GN=ABCG14 PE=... [more]
Q9SZR93.2e-0442.65ABC transporter G family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCG9 PE=1 ... [more]
BLAST of Lag0018915 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EMR52.7e-1459.30ABC transporter G family member 9 OS=Cucurbita moschata OX=3662 GN=LOC111435925 ... [more]
A0A6J1JC668.0e-1458.14ABC transporter G family member 9-like OS=Cucurbita maxima OX=3661 GN=LOC1114831... [more]
A0A6J1CP361.8e-1373.13ABC transporter G family member 9-like OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1CMG28.8e-1366.20ABC transporter G family member 9-like OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1CP452.0e-1264.79ABC transporter G family member 9-like OS=Momordica charantia OX=3673 GN=LOC1110... [more]
BLAST of Lag0018915 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G31770.11.6e-0638.30ATP-binding cassette 14 [more]
AT4G27420.12.3e-0542.65ABC-2 type transporter family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0018915.1Lag0018915.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0140359 ABC-type transporter activity
molecular_function GO:0005524 ATP binding