Lag0018869 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0018869
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr5: 35602438 .. 35604753 (-)
RNA-Seq ExpressionLag0018869
SyntenyLag0018869
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATGGAAGAATTACTGAATGAATGGAAAGATTTCAACTTGAGGGATAAAGAGAAAGAGAATTTCGTAGAACTGAATGAGAAAGAGTTGAAGGATATCGATGATCACCTAGAGACATGCATCATTGGAAAACTCATGGCTAAAAGAAATATTTCAGCAACTGCGGTCAGAAACGCCATGGCAGGTGCATGGAAAGCCAGAGAGAGATTTACCACGAAGACAATAGGCAAGAATACTTTTTTATTCAAGTTTGAAAACCAGCTGGACAAAGACTGGATGCTTGTAAATGGTCCATGGCCATTTGATAAGCAAATCTTGATTCTTGAAGAACCATTAGCAAACCAAAGAGTATTAGACTTAAAATTTAATGAAGTTGCCTTTTGGATAAGACTGATGAATCTCCCTCTGGGCTTTAGAAATCGAGCAGCAACAGAAAAAATAGGCAAGAATCTGGGGACATTTTTGGAGTATGATGAGGAAAGGAGTGGCTTCAACTGGGGGAATAACTTGAGACTGAAAATCAAATTTGATATATCCAAACTTATCCAGAGGGGCTTCATGTTAAAAGCAGACGACATTAAAGGCGAATGTTGGATTGCAATTAGATACGAGAGGCTGTCATATATATGCTACAGATGTGGCCGAATAGGTCATATAATGAAAGAATATGAGGAGCAGTTTCAAGGAGAATCATTTGGCACCAAGAAATATGAGTTTGGGAATTGGATCAAATTTCAAGGTTTTTTCAGTCAGTACAAAAAACCAGAATCACCCCTTTTTGATATTTACTGTACATATCATTTTTATTATTTAATCGTTTTATTAGACATATGTCATTTAAGGTAATTTATGTGGACATTTATTATATTAAACCTAATACATTTGATCTCAAATCTCATAAATAATATAATCCATAATAATTTTCATAATACACAAGTCAAGACCGAATAGAGAGGTTCTTGAAGCATTCCCTGAGAATTGGGGATCAACATCAGTCAAAGACTGTTTCGTCTAAGGAGGAGTACGAAGCAACAAAGGCTAGTAAAGATCAACGTTACGGTGAGGGATGGAGATGGAAGAATTACTGAATGAATGGAAAGATTTCAACTTGAGGGATAAAGAGAAAGAGAATTTCGTAGAACTGAATGAGAAAGAGTTGAAGGATATCGATGATCACCTAGAGACATGCATCATTGGAAAACTCATGGCTAAAAGAAATATTTCAGCAACTGCGGTCAGAAACGCCATGGCAGGTGCATGGAAAGCCAGAGAGAGATTTACCACGAAGACAATAGGCAAGAATACTTTTTTATTCAAGTTTGAAAACCAGCTGGACAAAGACTGGATGCTTGTAAATGGTCCATGGCCATTTGATAAGCAAATCTTGATTCTTGAAGAACCATTAGCAAACCAAAGAGTATTAGACTTAAAATTTAATGAAGTTGCCTTTTGGATAAGACTGATGAATCTCCCTCTGGGCTTTAGAAATCGAGCAGCAACAGAAAAAATAGGCAAGAATCTAGGGACATTTTTGGAGTATGATGAGGAAAGGAGTGGCTTCAACTGGGGGAATAACTTGAGACTGAAAATCAAATTTGATATATCCAAACTTATCCAGAGGGGCTTCATGTTAAAAGCAGACGACATTAAAGGCGAATGTTGGATTGCAATTAGATACGAGAGGCTGTCATATATATGCTACAGATGTGGCCGAATAGGTCATATAATGAAAGAATATGAGGAGCAGTTTCAAGGAGAATCATTTGGCACCAAGAAATATGAGTTTGGGAATTGGATCAAATTTCAAGGTTTTTTCAGTCAGTACAAAAAACCAGAATCACCCCTTTTTGAAGAGAAACACACGGAAGAAAATAAATCTAAGGAAGTGAAAGATGATAGGGAGAGGAATGGAGAAGATAAGGCCTTACCTGAAAACGACAGCCAAAATATGGAGATACCAAGTGAAGAGGAGGAAAATATTCTTGAATTACTAGAAGTGGAAAACAGAGGTGAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAGAGCAAATGGAACCAATGTGCGATGGCTTGAAGAAAATGTTGGAATTAATTTTAATAATTAATTCATATGTGGGTAACAAATTATATAACAATTATATTTGGGTTATTCAATGGGCATATTATGTGGTCTTGATTATGGACCCATAACTTCCCATGAAGAGGTGTGGCCTGCTGAGCAGAAACCAGCCCGTTGA

mRNA sequence

ATGGAGATGGAAGAATTACTGAATGAATGGAAAGATTTCAACTTGAGGGATAAAGAGAAAGAGAATTTCGTAGAACTGAATGAGAAAGAGTTGAAGGATATCGATGATCACCTAGAGACATGCATCATTGGAAAACTCATGGCTAAAAGAAATATTTCAGCAACTGCGGTCAGAAACGCCATGGCAGGTGCATGGAAAGCCAGAGAGAGATTTACCACGAAGACAATAGGCAAGAATACTTTTTTATTCAAGTTTGAAAACCAGCTGGACAAAGACTGGATGCTTGTAAATGGTCCATGGCCATTTGATAAGCAAATCTTGATTCTTGAAGAACCATTAGCAAACCAAAGAGTATTAGACTTAAAATTTAATGAAGTTGCCTTTTGGATAAGACTGATGAATCTCCCTCTGGGCTTTAGAAATCGAGCAGCAACAGAAAAAATAGGCAAGAATCTGGGGACATTTTTGGAGTATGATGAGGAAAGGAGTGGCTTCAACTGGGGGAATAACTTGAGACTGAAAATCAAATTTGATATATCCAAACTTATCCAGAGGGGCTTCATGTTAAAAGCAGACGACATTAAAGGCGAATGTTGGATTGCAATTAGATACGAGAGGCTGTCATATATATGCTACAGATGTGGCCGAATAGGTCATATAATGAAAGAATATGAGGAGCAGTTTCAAGGAGAATCATTTGGCACCAAGAAATATGAGTTTGGGAATTGGATCAAATTTCAAGATTTCAACTTGAGGGATAAAGAGAAAGAGAATTTCGTAGAACTGAATGAGAAAGAGTTGAAGGATATCGATGATCACCTAGAGACATGCATCATTGGAAAACTCATGGCTAAAAGAAATATTTCAGCAACTGCGGTCAGAAACGCCATGGCAGGTGCATGGAAAGCCAGAGAGAGATTTACCACGAAGACAATAGGCAAGAATACTTTTTTATTCAAGTTTGAAAACCAGCTGGACAAAGACTGGATGCTTGTAAATGGTCCATGGCCATTTGATAAGCAAATCTTGATTCTTGAAGAACCATTAGCAAACCAAAGAGTATTAGACTTAAAATTTAATGAAGTTGCCTTTTGGATAAGACTGATGAATCTCCCTCTGGGCTTTAGAAATCGAGCAGCAACAGAAAAAATAGGCAAGAATCTAGGGACATTTTTGGAGTATGATGAGGAAAGGAGTGGCTTCAACTGGGGGAATAACTTGAGACTGAAAATCAAATTTGATATATCCAAACTTATCCAGAGGGGCTTCATGTTAAAAGCAGACGACATTAAAGGCGAATGTTGGATTGCAATTAGATACGAGAGGCTGTCATATATATGCTACAGATGTGGCCGAATAGGTCATATAATGAAAGAATATGAGGAGCAGTTTCAAGGAGAATCATTTGGCACCAAGAAATATGAGTTTGGGAATTGGATCAAATTTCAAGGTTTTTTCAGTCAGTACAAAAAACCAGAATCACCCCTTTTTGAAGAGAAACACACGGAAGAAAATAAATCTAAGGAAGTGAAAGATGATAGGGAGAGGAATGGAGAAGATAAGGCCTTACCTGAAAACGACAGCCAAAATATGGAGATACCAAGTGAAGAGGAGGAAAATATTCTTGAATTACTAGAAGTGGAAAACAGAGAGGTGTGGCCTGCTGAGCAGAAACCAGCCCGTTGA

Coding sequence (CDS)

ATGGAGATGGAAGAATTACTGAATGAATGGAAAGATTTCAACTTGAGGGATAAAGAGAAAGAGAATTTCGTAGAACTGAATGAGAAAGAGTTGAAGGATATCGATGATCACCTAGAGACATGCATCATTGGAAAACTCATGGCTAAAAGAAATATTTCAGCAACTGCGGTCAGAAACGCCATGGCAGGTGCATGGAAAGCCAGAGAGAGATTTACCACGAAGACAATAGGCAAGAATACTTTTTTATTCAAGTTTGAAAACCAGCTGGACAAAGACTGGATGCTTGTAAATGGTCCATGGCCATTTGATAAGCAAATCTTGATTCTTGAAGAACCATTAGCAAACCAAAGAGTATTAGACTTAAAATTTAATGAAGTTGCCTTTTGGATAAGACTGATGAATCTCCCTCTGGGCTTTAGAAATCGAGCAGCAACAGAAAAAATAGGCAAGAATCTGGGGACATTTTTGGAGTATGATGAGGAAAGGAGTGGCTTCAACTGGGGGAATAACTTGAGACTGAAAATCAAATTTGATATATCCAAACTTATCCAGAGGGGCTTCATGTTAAAAGCAGACGACATTAAAGGCGAATGTTGGATTGCAATTAGATACGAGAGGCTGTCATATATATGCTACAGATGTGGCCGAATAGGTCATATAATGAAAGAATATGAGGAGCAGTTTCAAGGAGAATCATTTGGCACCAAGAAATATGAGTTTGGGAATTGGATCAAATTTCAAGATTTCAACTTGAGGGATAAAGAGAAAGAGAATTTCGTAGAACTGAATGAGAAAGAGTTGAAGGATATCGATGATCACCTAGAGACATGCATCATTGGAAAACTCATGGCTAAAAGAAATATTTCAGCAACTGCGGTCAGAAACGCCATGGCAGGTGCATGGAAAGCCAGAGAGAGATTTACCACGAAGACAATAGGCAAGAATACTTTTTTATTCAAGTTTGAAAACCAGCTGGACAAAGACTGGATGCTTGTAAATGGTCCATGGCCATTTGATAAGCAAATCTTGATTCTTGAAGAACCATTAGCAAACCAAAGAGTATTAGACTTAAAATTTAATGAAGTTGCCTTTTGGATAAGACTGATGAATCTCCCTCTGGGCTTTAGAAATCGAGCAGCAACAGAAAAAATAGGCAAGAATCTAGGGACATTTTTGGAGTATGATGAGGAAAGGAGTGGCTTCAACTGGGGGAATAACTTGAGACTGAAAATCAAATTTGATATATCCAAACTTATCCAGAGGGGCTTCATGTTAAAAGCAGACGACATTAAAGGCGAATGTTGGATTGCAATTAGATACGAGAGGCTGTCATATATATGCTACAGATGTGGCCGAATAGGTCATATAATGAAAGAATATGAGGAGCAGTTTCAAGGAGAATCATTTGGCACCAAGAAATATGAGTTTGGGAATTGGATCAAATTTCAAGGTTTTTTCAGTCAGTACAAAAAACCAGAATCACCCCTTTTTGAAGAGAAACACACGGAAGAAAATAAATCTAAGGAAGTGAAAGATGATAGGGAGAGGAATGGAGAAGATAAGGCCTTACCTGAAAACGACAGCCAAAATATGGAGATACCAAGTGAAGAGGAGGAAAATATTCTTGAATTACTAGAAGTGGAAAACAGAGAGGTGTGGCCTGCTGAGCAGAAACCAGCCCGTTGA

Protein sequence

MEMEELLNEWKDFNLRDKEKENFVELNEKELKDIDDHLETCIIGKLMAKRNISATAVRNAMAGAWKARERFTTKTIGKNTFLFKFENQLDKDWMLVNGPWPFDKQILILEEPLANQRVLDLKFNEVAFWIRLMNLPLGFRNRAATEKIGKNLGTFLEYDEERSGFNWGNNLRLKIKFDISKLIQRGFMLKADDIKGECWIAIRYERLSYICYRCGRIGHIMKEYEEQFQGESFGTKKYEFGNWIKFQDFNLRDKEKENFVELNEKELKDIDDHLETCIIGKLMAKRNISATAVRNAMAGAWKARERFTTKTIGKNTFLFKFENQLDKDWMLVNGPWPFDKQILILEEPLANQRVLDLKFNEVAFWIRLMNLPLGFRNRAATEKIGKNLGTFLEYDEERSGFNWGNNLRLKIKFDISKLIQRGFMLKADDIKGECWIAIRYERLSYICYRCGRIGHIMKEYEEQFQGESFGTKKYEFGNWIKFQGFFSQYKKPESPLFEEKHTEENKSKEVKDDRERNGEDKALPENDSQNMEIPSEEEENILELLEVENREVWPAEQKPAR
Homology
BLAST of Lag0018869 vs. NCBI nr
Match: GAU43133.1 (hypothetical protein TSUD_348540 [Trifolium subterraneum])

HSP 1 Score: 216.9 bits (551), Expect = 4.6e-52
Identity = 160/605 (26.45%), Postives = 288/605 (47.60%), Query Frame = 0

Query: 7   LNEWKDFNLRDKEKENFVELNEKELKDIDDHLETCIIGKLMAKRNISATAVRNAMAGAWK 66
           + +WK+F   ++E +  + ++E E    D+     +  KL      +A A +     +WK
Sbjct: 1   MEQWKNFKFSNQELQKSLNIDEFESYK-DELFHRTLAVKLWTNTTYNAKAFKQTTIQSWK 60

Query: 67  ARERFTTKTIGKNTFLFKFENQLDKDWMLVNGPWPFDKQILILEEPLANQRVLDLKFNEV 126
            +     + + KN +LF+F  + D D +  NGPW FDK  ++L +    +++ +   +++
Sbjct: 61  LKNPVQVQDLNKNLYLFRFSTKNDADNVFNNGPWCFDKSHIVLRKITGEEQLENFDMDKI 120

Query: 127 AFWIRLMNLPLGFRNRAATEKIGKNLGTFLEYDEERSGFNWGNNLRLKIKFDISKLIQRG 186
            FW+R+ +LPL  R+ +  +K G  +G + E  ++R  +  G  LR+++  D++K + RG
Sbjct: 121 LFWVRVYDLPLKLRSDSIAKKFGDVIGVY-EGIDQRDVYRMGRFLRIRVLLDLNKPLVRG 180

Query: 187 FML--KADDIKGECWIAIRYERLSYICYRCGRIGHIMKEYEEQFQGESFG-----TKKYE 246
            ++  +  +I+    +  +YE+L   C+ CGRIGH MK  +E    E+ G      K+Y 
Sbjct: 181 TLVCYQGRNIR----VFFKYEKLQRFCFICGRIGHQMKVCDENVDEENEGCEEVVEKEYS 240

Query: 247 FGNWI------KFQDFNLRDK-----EKENFVELNEKELKDID----------------- 306
           FG W+      K  +   +D+      K  F   +  E++D++                 
Sbjct: 241 FGQWLRASPPPKINNEEKKDRSSSSCRKSLFAYTSSSEVEDLETRKGEEVVMEQNKGLIV 300

Query: 307 DHLETCIIG--------KLMAKRNISATAVRNAMAGAWKARERFTTKTIGKNTFLFKFEN 366
           D +E    G        KL    + +A A +     +WK R     + + KN +LF+F  
Sbjct: 301 DEVEVYKDGLFCRTLAVKLWTNTSYNAKAFKQTTIQSWKLRNPVEVQDLNKNLYLFRFST 360

Query: 367 QLDKDWMLVNGPWPFDKQILILEEPLANQRVLDLKFNEVAFWIRLMNLPLGFRNRAATEK 426
           + D + +L NGPW FDK ++IL++    ++  +   ++V+FW+R+ +LPL  R+ +  +K
Sbjct: 361 KKDAENVLQNGPWSFDKNLIILQKITGEEQPAEFDMHKVSFWVRIYDLPLQLRSDSIAKK 420

Query: 427 IGKNLGTFLEYDEERSGFNWGNNLRLKIKFDISKLIQRGFMLKADDIKGECWIAIRYERL 486
           IG  +G   E   +R  +  G+ LR+++  D+ K + RG ++          +  +YERL
Sbjct: 421 IGDFIGVH-EETYQREIYRTGSFLRIRVLMDLKKPLMRGTVVCYQG--RSLRVFFKYERL 480

Query: 487 SYICYRCGRIGHIMK--EYEEQFQGESFG---TKKYEFGNWIKFQGFFSQYKKPESPLFE 546
              C+ CGRIGH  K  EY E+ + E FG    K+Y FG W+K          P    +E
Sbjct: 481 PTFCFNCGRIGHQKKTCEYNEE-EEEGFGEVEEKEYSFGPWLK-------ASPPPKTNYE 540

Query: 547 EKHTEENKSKE----------VKDDRERNGEDKALPEN----DSQNMEIPSEEEENILEL 550
           EK +  +  ++          V++     G++  + +N     S+   +  EE    L  
Sbjct: 541 EKDSNSSSCRKSLFACTSSSIVEESEPIKGKEVKVEQNKGNAKSKEQCLDFEESGKKLNN 588

BLAST of Lag0018869 vs. NCBI nr
Match: XP_039685362.1 (uncharacterized protein LOC112417101 [Medicago truncatula])

HSP 1 Score: 206.5 bits (524), Expect = 6.2e-49
Identity = 156/618 (25.24%), Postives = 291/618 (47.09%), Query Frame = 0

Query: 7   LNEWKDFNLRDKEKENFVELNEKELKDIDDHLETCIIGKLMAKRNISATAVR-NAMAGAW 66
           + +WKDFNL  +E +  + + E E+ + DD  +  +  KL      +A A +   +  +W
Sbjct: 1   MEQWKDFNLSKQELQKGLIIEESEVCE-DDVFDRTLAVKLWTNSTYNAKAFKQTTIQYSW 60

Query: 67  KARERFTTKTIGKNTFLFKFENQLDKDWMLVNGPWPFDKQILILEEPLANQRVLDL-KFN 126
           K +     + + KN +LF+F  + D + +L NGPW F   ++IL++    ++ ++L   +
Sbjct: 61  KLKNPVEVEDLDKNLYLFRFSTKKDAENVLKNGPWSFKNNVIILQKITGKEQPVELDNMH 120

Query: 127 EVAFWIRLMNLPLGFRNRAATEKIGKNLGTFLEYDEERSGFNWGNNLRLKIKFDISKLIQ 186
           +++FW+R+  LP   R+ +  +KIG  +G + E D++   +  G  LR+K+  D+ K + 
Sbjct: 121 KMSFWVRIYELPFKLRSDSIAKKIGDVIGVYEETDQQ-DVYRMGRFLRIKVLLDLKKPLM 180

Query: 187 RGFMLKADDIKGECWIAIRYERLSYICYRCGRIGHIMKEYEEQFQGESFG---------- 246
           RG ++     +    +   YERL   C++CGR+GH M + +     E  G          
Sbjct: 181 RGTVVCYQ--RKNLRVFFEYERLPAFCFKCGRLGHQMNKCDLNVDEEKEGCEEVFFLTQG 240

Query: 247 ------TKKYEFGNWIK-----------------------------FQDFNLRDKEKENF 306
                  K+Y FG W++                                    D  K + 
Sbjct: 241 CEEVAEEKEYPFGPWLRATTKPKITYDEKKDSSSSSCSKSLFPCTSSSKVEESDPRKGDD 300

Query: 307 VELNEKELKDIDDH-------LETCIIGKLMAKRNISATA-VRNAMAGAWKARERFTTKT 366
           VE+ + +   +D+            + GKL      +  A ++  +  +W+ +     + 
Sbjct: 301 VEMEQNKGLIVDEAEAYKDELFRRTLAGKLWTNNTYNVKAFMQTTIQYSWRLKNPVEVED 360

Query: 367 IGKNTFLFKFENQLDKDWMLVNGPWPFDKQILILEEPLANQRVLDL-KFNEVAFWIRLMN 426
           + KN +LF+F  + D D +L NGPW F  +++IL++    ++  +L    +V+FW+R+  
Sbjct: 361 LDKNLYLFRFSTKKDVDNVLKNGPWSFKNKVIILQKITGEEQPAELDMLKKVSFWVRIYE 420

Query: 427 LPLGFRNRAATEKIGKNLGTFLEYDEERSGFNWGNNLRLKIKFDISKLIQRGFMLKADDI 486
           LPL  R+ +  +KIG  +G   E D +R  +  G  LR+++  D+++ + RG M++  + 
Sbjct: 421 LPLKLRSDSIAKKIGDLIGVHEETD-QRDVYRMGRFLRIRVLLDLNRPLMRGTMIRYQE- 480

Query: 487 KGECWIAIRYERLSYICYRCGRIGHIMKEYEEQFQG----ESFGTKKYEFGNWIKFQGF- 546
                +  +YERL   C++CGRIGH + E +E  +     E    K++ FG W+K     
Sbjct: 481 -RNLQVFFKYERLPTFCFKCGRIGHQIMECDENIEEKESCEEVEEKEHSFGPWLKASPLP 540

BLAST of Lag0018869 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 191.0 bits (484), Expect = 2.7e-44
Identity = 92/249 (36.95%), Postives = 152/249 (61.04%), Query Frame = 0

Query: 1   MEMEELLNEWKDFNLRDKEKENFVELNEKELKDIDDHLETCIIGKLMAKRNISATAVRNA 60
           M+ E LL +W+ F L  +E E  ++++   +K  +  L   ++GKL+AKR ISA  +   
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  MAGAWKARERFTTKTIGKNTFLFKFENQLDKDWMLVNGPWPFDKQILILEEPLANQRVLD 120
           +  AWK   + T ++IGKN FLF F  + D + ++  GPW FDK +++L++P +++ + +
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 LKFNEVAFWIRLMNLPLGFRNRAATEKIGKNLGTFLEYDEERSGFNWGNNLRLKIKFDIS 180
           L+FN VAFWI L +LP+ + N+    ++G  +G F++ D    GF+WG +LR+++  DI+
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 181 KLIQRGFMLKADDIKGECWIAIRYERLSYICYRCGRIGHIMKEYEEQF---QGESFGTKK 240
           K ++RG  +  D   G CWI I+YERL   CY CG IGH   + + ++   Q +S  T  
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATS- 240

Query: 241 YEFGNWIKF 247
            E+G W++F
Sbjct: 241 -EYGPWLRF 247

BLAST of Lag0018869 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 173.3 bits (438), Expect = 5.8e-39
Identity = 86/248 (34.68%), Postives = 141/248 (56.85%), Query Frame = 0

Query: 1   MEMEELLNEWKDFNLRDKEKENFVELNEKELKDIDDHLETCIIGKLMAKRNISATAVRNA 60
           M    LL EWK+F L  +E +  V+++   L+     LE  +I KL++KR+IS T ++N 
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  MAGAWKAR-ERFTTKTIGKNTFLFKFENQLDKDWMLVNGPWPFDKQILILEEPLANQRVL 120
           +  AWK   + F+   IG N FLF F    D++ +L  GPW FD+ ++I++ P++  + L
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 DLKFNEVAFWIRLMNLPLGFRNRAATEKIGKNLGTFLEYDEERSGFNWGNNLRLKIKFDI 180
           D+ F  V+ W+   +L L   N+    ++G  +G F + +   + F WG+ LR++++FD+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 SKLIQRGFMLKADDIKGECWIAIRYERLSYICYRCGRIGHIMKEYEEQFQGESFGTKKYE 240
            K + RG  L  D   G CWI I+YERL    Y CGR+ HI+K+  +        +K  +
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSV--SKNLQ 240

Query: 241 FGNWIKFQ 248
           +G W++FQ
Sbjct: 241 YGPWLRFQ 246

BLAST of Lag0018869 vs. NCBI nr
Match: PNX71169.1 (cysteine desulfurase mitochondrial-like [Trifolium pratense])

HSP 1 Score: 172.6 bits (436), Expect = 9.9e-39
Identity = 126/520 (24.23%), Postives = 225/520 (43.27%), Query Frame = 0

Query: 7   LNEWKDFNLRDKEKENFVELNEKELKDIDDHLETCIIGKLMAKRNISATAVRNAMAGAWK 66
           + +WK+F   ++E +  + ++E E    D+     +  KL    N +A A +     +W+
Sbjct: 1   MEQWKNFTFSNQELQKSLNIDESESYK-DELFHHTLAVKLWTNTNYNAKAFKQTTIQSWR 60

Query: 67  ARERFTTKTIGKNTFLFKFENQLDKDWMLVNGPWPFDKQILILEEPLANQRVLDLKFNEV 126
            +     + + KN +LF+F  + D D +  NGPW FDK  ++L +    +   +   +++
Sbjct: 61  LKNPAEVQDLNKNLYLFRFSTKEDADNVYNNGPWCFDKNHVVLRKITGEEHPTEFDMDKI 120

Query: 127 AFWIRLMNLPLGFRNRAATEKIGKNLGTFLEYDEERSGFNWGNNLRLKIKFDISKLIQRG 186
            FW+R+ +LPL  R+ +  +KIG  +G   E         WG                  
Sbjct: 121 LFWVRIYDLPLKLRSDSIAKKIGDVIGVMKEMINVMF-IEWG------------------ 180

Query: 187 FMLKADDIKGECWIAIRYERLSYICYRCGRIGHIMKEYEEQFQGESFG-----TKKYEFG 246
                                          GH MK  +E    E+ G      K+Y FG
Sbjct: 181 -------------------------------GHQMKVCDENVDEENEGRGEVEEKEYSFG 240

Query: 247 NWIKFQ---DFNLRDKEKEN--------FVELNEKELKDID-----------------DH 306
            W++      FN  +K+  +        F   +  E++D++                 D 
Sbjct: 241 EWLRASPPPKFNYEEKKDRSSSSCRKFLFAYTSSSEVEDLETRKGEGVEMEQNKGLVIDE 300

Query: 307 LET--------CIIGKLMAKRNISATAVRNAMAGAWKARERFTTKTIGKNTFLFKFENQL 366
           +E          +  KL    + +A A +     +WK R     + + KN +LF+F  + 
Sbjct: 301 VEAYKDRLFCRTLTVKLWTNTSYNAKAFKQTTIQSWKLRNPVEVQDLNKNLYLFRFSTKK 360

Query: 367 DKDWMLVNGPWPFDKQILILEEPLANQRVLDLKFNEVAFWIRLMNLPLGFRNRAATEKIG 426
           D + +L NGPW FDK ++IL++    +++ +   ++V+F +R+ +LPL  R+ +  + IG
Sbjct: 361 DAENVLKNGPWSFDKNLIILQKITGEEQLAEFDMHKVSFLVRIYDLPLQLRSDSIAKTIG 420

Query: 427 KNLGTFLEYDEERSGFNWGNNLRLKIKFDISKLIQRGFMLKADDIKGECWIAIRYERLSY 482
             +G   E D+ +     G+ LR+++  D+ K + RG ++          +  +YERL  
Sbjct: 421 DFIGVHEETDQLKIN-RTGSFLRIRVLIDLKKPLTRGTVVCYQG--RSLRVFFKYERLPT 466

BLAST of Lag0018869 vs. ExPASy TrEMBL
Match: A0A2Z6NM90 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_348540 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.2e-52
Identity = 160/605 (26.45%), Postives = 288/605 (47.60%), Query Frame = 0

Query: 7   LNEWKDFNLRDKEKENFVELNEKELKDIDDHLETCIIGKLMAKRNISATAVRNAMAGAWK 66
           + +WK+F   ++E +  + ++E E    D+     +  KL      +A A +     +WK
Sbjct: 1   MEQWKNFKFSNQELQKSLNIDEFESYK-DELFHRTLAVKLWTNTTYNAKAFKQTTIQSWK 60

Query: 67  ARERFTTKTIGKNTFLFKFENQLDKDWMLVNGPWPFDKQILILEEPLANQRVLDLKFNEV 126
            +     + + KN +LF+F  + D D +  NGPW FDK  ++L +    +++ +   +++
Sbjct: 61  LKNPVQVQDLNKNLYLFRFSTKNDADNVFNNGPWCFDKSHIVLRKITGEEQLENFDMDKI 120

Query: 127 AFWIRLMNLPLGFRNRAATEKIGKNLGTFLEYDEERSGFNWGNNLRLKIKFDISKLIQRG 186
            FW+R+ +LPL  R+ +  +K G  +G + E  ++R  +  G  LR+++  D++K + RG
Sbjct: 121 LFWVRVYDLPLKLRSDSIAKKFGDVIGVY-EGIDQRDVYRMGRFLRIRVLLDLNKPLVRG 180

Query: 187 FML--KADDIKGECWIAIRYERLSYICYRCGRIGHIMKEYEEQFQGESFG-----TKKYE 246
            ++  +  +I+    +  +YE+L   C+ CGRIGH MK  +E    E+ G      K+Y 
Sbjct: 181 TLVCYQGRNIR----VFFKYEKLQRFCFICGRIGHQMKVCDENVDEENEGCEEVVEKEYS 240

Query: 247 FGNWI------KFQDFNLRDK-----EKENFVELNEKELKDID----------------- 306
           FG W+      K  +   +D+      K  F   +  E++D++                 
Sbjct: 241 FGQWLRASPPPKINNEEKKDRSSSSCRKSLFAYTSSSEVEDLETRKGEEVVMEQNKGLIV 300

Query: 307 DHLETCIIG--------KLMAKRNISATAVRNAMAGAWKARERFTTKTIGKNTFLFKFEN 366
           D +E    G        KL    + +A A +     +WK R     + + KN +LF+F  
Sbjct: 301 DEVEVYKDGLFCRTLAVKLWTNTSYNAKAFKQTTIQSWKLRNPVEVQDLNKNLYLFRFST 360

Query: 367 QLDKDWMLVNGPWPFDKQILILEEPLANQRVLDLKFNEVAFWIRLMNLPLGFRNRAATEK 426
           + D + +L NGPW FDK ++IL++    ++  +   ++V+FW+R+ +LPL  R+ +  +K
Sbjct: 361 KKDAENVLQNGPWSFDKNLIILQKITGEEQPAEFDMHKVSFWVRIYDLPLQLRSDSIAKK 420

Query: 427 IGKNLGTFLEYDEERSGFNWGNNLRLKIKFDISKLIQRGFMLKADDIKGECWIAIRYERL 486
           IG  +G   E   +R  +  G+ LR+++  D+ K + RG ++          +  +YERL
Sbjct: 421 IGDFIGVH-EETYQREIYRTGSFLRIRVLMDLKKPLMRGTVVCYQG--RSLRVFFKYERL 480

Query: 487 SYICYRCGRIGHIMK--EYEEQFQGESFG---TKKYEFGNWIKFQGFFSQYKKPESPLFE 546
              C+ CGRIGH  K  EY E+ + E FG    K+Y FG W+K          P    +E
Sbjct: 481 PTFCFNCGRIGHQKKTCEYNEE-EEEGFGEVEEKEYSFGPWLK-------ASPPPKTNYE 540

Query: 547 EKHTEENKSKE----------VKDDRERNGEDKALPEN----DSQNMEIPSEEEENILEL 550
           EK +  +  ++          V++     G++  + +N     S+   +  EE    L  
Sbjct: 541 EKDSNSSSCRKSLFACTSSSIVEESEPIKGKEVKVEQNKGNAKSKEQCLDFEESGKKLNN 588

BLAST of Lag0018869 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-44
Identity = 92/249 (36.95%), Postives = 152/249 (61.04%), Query Frame = 0

Query: 1   MEMEELLNEWKDFNLRDKEKENFVELNEKELKDIDDHLETCIIGKLMAKRNISATAVRNA 60
           M+ E LL +W+ F L  +E E  ++++   +K  +  L   ++GKL+AKR ISA  +   
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  MAGAWKARERFTTKTIGKNTFLFKFENQLDKDWMLVNGPWPFDKQILILEEPLANQRVLD 120
           +  AWK   + T ++IGKN FLF F  + D + ++  GPW FDK +++L++P +++ + +
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 LKFNEVAFWIRLMNLPLGFRNRAATEKIGKNLGTFLEYDEERSGFNWGNNLRLKIKFDIS 180
           L+FN VAFWI L +LP+ + N+    ++G  +G F++ D    GF+WG +LR+++  DI+
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 181 KLIQRGFMLKADDIKGECWIAIRYERLSYICYRCGRIGHIMKEYEEQF---QGESFGTKK 240
           K ++RG  +  D   G CWI I+YERL   CY CG IGH   + + ++   Q +S  T  
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATS- 240

Query: 241 YEFGNWIKF 247
            E+G W++F
Sbjct: 241 -EYGPWLRF 247

BLAST of Lag0018869 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.8e-39
Identity = 86/248 (34.68%), Postives = 141/248 (56.85%), Query Frame = 0

Query: 1   MEMEELLNEWKDFNLRDKEKENFVELNEKELKDIDDHLETCIIGKLMAKRNISATAVRNA 60
           M    LL EWK+F L  +E +  V+++   L+     LE  +I KL++KR+IS T ++N 
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  MAGAWKAR-ERFTTKTIGKNTFLFKFENQLDKDWMLVNGPWPFDKQILILEEPLANQRVL 120
           +  AWK   + F+   IG N FLF F    D++ +L  GPW FD+ ++I++ P++  + L
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 DLKFNEVAFWIRLMNLPLGFRNRAATEKIGKNLGTFLEYDEERSGFNWGNNLRLKIKFDI 180
           D+ F  V+ W+   +L L   N+    ++G  +G F + +   + F WG+ LR++++FD+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 SKLIQRGFMLKADDIKGECWIAIRYERLSYICYRCGRIGHIMKEYEEQFQGESFGTKKYE 240
            K + RG  L  D   G CWI I+YERL    Y CGR+ HI+K+  +        +K  +
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSV--SKNLQ 240

Query: 241 FGNWIKFQ 248
           +G W++FQ
Sbjct: 241 YGPWLRFQ 246

BLAST of Lag0018869 vs. ExPASy TrEMBL
Match: A0A2K3KY15 (Cysteine desulfurase mitochondrial-like OS=Trifolium pratense OX=57577 GN=L195_g027040 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.8e-39
Identity = 126/520 (24.23%), Postives = 225/520 (43.27%), Query Frame = 0

Query: 7   LNEWKDFNLRDKEKENFVELNEKELKDIDDHLETCIIGKLMAKRNISATAVRNAMAGAWK 66
           + +WK+F   ++E +  + ++E E    D+     +  KL    N +A A +     +W+
Sbjct: 1   MEQWKNFTFSNQELQKSLNIDESESYK-DELFHHTLAVKLWTNTNYNAKAFKQTTIQSWR 60

Query: 67  ARERFTTKTIGKNTFLFKFENQLDKDWMLVNGPWPFDKQILILEEPLANQRVLDLKFNEV 126
            +     + + KN +LF+F  + D D +  NGPW FDK  ++L +    +   +   +++
Sbjct: 61  LKNPAEVQDLNKNLYLFRFSTKEDADNVYNNGPWCFDKNHVVLRKITGEEHPTEFDMDKI 120

Query: 127 AFWIRLMNLPLGFRNRAATEKIGKNLGTFLEYDEERSGFNWGNNLRLKIKFDISKLIQRG 186
            FW+R+ +LPL  R+ +  +KIG  +G   E         WG                  
Sbjct: 121 LFWVRIYDLPLKLRSDSIAKKIGDVIGVMKEMINVMF-IEWG------------------ 180

Query: 187 FMLKADDIKGECWIAIRYERLSYICYRCGRIGHIMKEYEEQFQGESFG-----TKKYEFG 246
                                          GH MK  +E    E+ G      K+Y FG
Sbjct: 181 -------------------------------GHQMKVCDENVDEENEGRGEVEEKEYSFG 240

Query: 247 NWIKFQ---DFNLRDKEKEN--------FVELNEKELKDID-----------------DH 306
            W++      FN  +K+  +        F   +  E++D++                 D 
Sbjct: 241 EWLRASPPPKFNYEEKKDRSSSSCRKFLFAYTSSSEVEDLETRKGEGVEMEQNKGLVIDE 300

Query: 307 LET--------CIIGKLMAKRNISATAVRNAMAGAWKARERFTTKTIGKNTFLFKFENQL 366
           +E          +  KL    + +A A +     +WK R     + + KN +LF+F  + 
Sbjct: 301 VEAYKDRLFCRTLTVKLWTNTSYNAKAFKQTTIQSWKLRNPVEVQDLNKNLYLFRFSTKK 360

Query: 367 DKDWMLVNGPWPFDKQILILEEPLANQRVLDLKFNEVAFWIRLMNLPLGFRNRAATEKIG 426
           D + +L NGPW FDK ++IL++    +++ +   ++V+F +R+ +LPL  R+ +  + IG
Sbjct: 361 DAENVLKNGPWSFDKNLIILQKITGEEQLAEFDMHKVSFLVRIYDLPLQLRSDSIAKTIG 420

Query: 427 KNLGTFLEYDEERSGFNWGNNLRLKIKFDISKLIQRGFMLKADDIKGECWIAIRYERLSY 482
             +G   E D+ +     G+ LR+++  D+ K + RG ++          +  +YERL  
Sbjct: 421 DFIGVHEETDQLKIN-RTGSFLRIRVLIDLKKPLTRGTVVCYQG--RSLRVFFKYERLPT 466

BLAST of Lag0018869 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.2e-36
Identity = 84/244 (34.43%), Postives = 134/244 (54.92%), Query Frame = 0

Query: 5   ELLNEWKDFNLRDKEKENFVELNEKELKDIDDHLETCIIGKLMAKRNISATAVRNAMAGA 64
           +LL EWK+F L  +E+E  ++++          LE  ++GKL  KR I+   ++N M  A
Sbjct: 5   DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64

Query: 65  WKARER-FTTKTIGKNTFLFKFENQLDKDWMLVNGPWPFDKQILILEEPLANQRVLDLKF 124
           WK     F  +++G N FLF F   LD++ +  +GPW FD+ ++++ +P+A     +L F
Sbjct: 65  WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124

Query: 125 NEVAFWIRLMNLPLGFRNRAATEKIGKNLGTFLEYDEERSGFNWGNNLRLKIKFDISKLI 184
            ++  W+R  +LPLG   R    ++G  LG F E D +    +WG+NLR+++  DISK +
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184

Query: 185 QRGFMLKADDIKGECWIAIRYERLSYICYRCGRIGHIMKEYEEQFQGESFGTKKYEFGNW 244
           +RG  L  D   G  WI I+YERL   CY CG                S   KK+++G+W
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL---------------SSSRKKHQYGSW 233

Query: 245 IKFQ 248
           +++Q
Sbjct: 245 LRYQ 233

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
GAU43133.14.6e-5226.45hypothetical protein TSUD_348540 [Trifolium subterraneum][more]
XP_039685362.16.2e-4925.24uncharacterized protein LOC112417101 [Medicago truncatula][more]
XP_022156185.12.7e-4436.95uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022132681.15.8e-3934.68uncharacterized protein LOC111005481 [Momordica charantia][more]
PNX71169.19.9e-3924.23cysteine desulfurase mitochondrial-like [Trifolium pratense][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2Z6NM902.2e-5226.45Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_348540 PE=4 SV... [more]
A0A6J1DU551.3e-4436.95uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1BSZ12.8e-3934.68uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A2K3KY154.8e-3924.23Cysteine desulfurase mitochondrial-like OS=Trifolium pratense OX=57577 GN=L195_g... [more]
A0A6J1DX302.2e-3634.43uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 210..226
e-value: 0.45
score: 13.4
coord: 446..462
e-value: 0.45
score: 13.4
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 414..459
e-value: 2.9E-8
score: 33.3
coord: 178..223
e-value: 2.9E-8
score: 33.3
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 35..175
e-value: 4.5E-25
score: 87.9
coord: 271..411
e-value: 4.5E-25
score: 87.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..540
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..526
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 249..517
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 15..252
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 15..252
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 249..517

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0018869.1Lag0018869.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding