Lag0018857 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAAAGAGGCCCACGCCCCCCTTCGCTCTTCTCCTCGGCCTCGACCCATTGCCGAGGCTGAGGAAGAGGTCGGCCTCGACCCAATGCCGAGGGCGACCAAGGGCATGGGCCTAAGCCCGTTGTGGATCGACCCATCGTTGTCTCTCAGAGCTCTAAGGTAAACCCCAGCAGAAAAAGGGATAAATACACATCAAGGCCACCTAAGAACCAAAAAAAAGAAAAATATTTAATACTGTAGGTACATCTTCGAGACTCTTGTGCTACCGTTTTTTTTTCTCTCCTCCAGAACTAACTTAAGCATCGGAGTGCGTGTGGCCGTGCTGCGTTTACTCATCTTACAAGTCATGTCTTCCTCCTTTATTCAACAAATTCACTGCTAGTGTCACGTGGAAGCTAGGTAATCCGCCTAACCTAAATTTGACTATCAACAAACTAGATGATTCAAACATAAGTTATAAAATTAAAAGAATCCTAGTTGTAAAATTCCAAGCACTTGAGGATGGCAAATGTTAGAGAATATGAAGTTAAATAATATCATTTTTTGTGGAAGGTTGCAACAATAACTAGCTAAATTTATGTCGAGAGCATAACTAGACAATTAAAATATGCACTCATTCTCTTTATGTGGAAGATTCAATTTTCCACTCCCAATATTTGTTATACTAAAAAACAACTCAATTTATAACTTATCATAAAGTGACTAAAACACAATTTTAATGTTTCGGTGACCAAATAAAAAACACGAGTAATTTAACAAATAAATTAAAAACGAAAAATGACAAAAATCACCCATAAAATCCTCAATTTAATCAATTACCCTTCTAAGTTATGAAATTTTATGATTAAGCCCTTGAAATATTGTAAAATACACAAACTACCTCTAAATTGTAAAGATAAATACAATTAAACTCTCTAATTTAAGTCTTTAGAGCCAACCTATTCAGTTTCTACTGTTCTCCGATCAGAGGAGTTTCTCTCAGGCTGGTTTTTGCAGCCTGCCTTCTTCCTTCCTCTGAAGGATTATTGCCAAATATGGATGTAATCGAAAAGCTCTCCACGCTCAAACTTTCACAGAAGGAATCTAGTGGAATAAACTCATCGGAGTTAGGCTTGTCTGAAAGCCAGACTAAGCTCCAAAATTGTTTGGTAGGCAAGGTTGTATCTCAAAGAATTATCAACATTGATGCTTTTCGGAAAACTATGACAAACGTATGGTATTTCTGCCGAGGGATTTCCATCGATAATGTTGGGGACAACCTCTTCCTTATCAATCCACAATCCATCGGGGGAAGAGACAGAATCGTGGAAGAAAGTCCATGGTGTTTTGACGGTAATTTAATACTACTCAAAGCCCCAACAACTTTTGATTTACCGGAAGATATAATTTTTGATGAACCAAATTTTTGGGTTCAATTCCACAATCTTCCGCTTGGATTACGAAACGACTCAGTAGCACAAATGCTTGGAAGCCGAATAGGGACTGTTCTGAGAATTGATACGAACGAATTGAATGAATGTTGGGGTCGTTTTCTTCGAGTACGGATAAAGATGAAGATTGACGAGCCTTTATGTAGGGGATTAACTATCAATGGCGGACCATCGAGAAAAATCATGGTGGCAATTAAATACGAGAGATTACCAGATTTCTGTTATTTTTGCGGAATGATTGACCACAACGATGGTTCATGCCCACTGCTAAAAACACAGGTGAAACCAGAAAAACAGTTTGGATCATGGATGCGAGCGGCTACTCCTCCAAGGAAAAATCGTGTTTACGCAAGCGGCCGAGGTTTCGATGGGTACCGAGGGGGCAGAGGACGTTTTGGAAACAAATGGTGGACCAAACAATCGTGGCGATCTGAACCAATGGCGGATGAACGAGACTCCGGCCACGATTTCGATCACGATGAAGACGTTGATTCAGTCGATTCACAAAACTTGAAAGGACGCAGTGGCGAACAACAAGCTGAAACCGATCACCGGACGGCCACTGCAACCGGCGTTGACAACCTGTCTCCTCTGCATTCAAAGCTACAAACGAAAAAGACGGGTATTAAATGTCCAGTATCCTTAGGAAACGCTAATATCACGTTTTCTTTCCAAAAAAATGCAGATGGCGTTTTTCTCGGAAATGAGGGTGATGGAATAAATGATTGCAACGACCAGAGATCCCTAAAAACCAGCGAAATCATAGAGGGTGAAGGGAAAGTTAGCGGCGGCAAGCTATTAGGAGATTTAGGGCAAATGGTTACTGATGCTCATGAAAATCAACTTGGGCCCATTGCAAAGGATAATACCATCTCAGCCCACATAACCACTTGCCCAGATCAGTCCAGTGAGCAGCATTTAAATGTGAACCTTGAATCTATTAATGGGCCAACTAATTCAAGCCCAATTTCCTCTAATGATCAGCAGCAGCGGACGAAACCACATGACCCAATTTCCCACGAAGACACTAGAATGGTCGAAATCTGGCCCGATTTTCAGTCTAGTCAAACGGAAATTTTCATGACTAACGATAAACAGAAGCAGCCCACAAGCGTTGTCTCAGAAAGTGGACAAAAGGGAAAGCAGGAAGAAGACATTTATAGTTTCAAGCCGTTAAAAGGTTGGAAAAGAAGAAATAGGCAGGAAGAACATATGGAGGCTGACCAATCCACATCTTACACGAAATTGTTTAGGAAAAAAAGAGCTGCAGAGGATGAGAATTTGACAGGAAGCTCAGACAAGAAATTCAAATCTCAAATTCCACTAAACAATGAAATTCTATCGGCGGAGCCTGATCAACAGGCCCGCCGGGAGCCATGA ATGAAAAAAGAGGCCCACGCCCCCCTTCGCTCTTCTCCTCGGCCTCGACCCATTGCCGAGGCTGAGGAAGAGGTCGGCCTCGACCCAATGCCGAGGGCGACCAAGGGCATGGGCCTAAGCCCGTTGTGGATCGACCCATCGTTGTCTCTCAGAGCTCTAAGTTTCTACTGTTCTCCGATCAGAGGAGTTTCTCTCAGGCTGGTTTTTGCAGCCTGCCTTCTTCCTTCCTCTGAAGGATTATTGCCAAATATGGATGTAATCGAAAAGCTCTCCACGCTCAAACTTTCACAGAAGGAATCTAGTGGAATAAACTCATCGGAGTTAGGCTTGTCTGAAAGCCAGACTAAGCTCCAAAATTGTTTGGTAGGCAAGGTTGTATCTCAAAGAATTATCAACATTGATGCTTTTCGGAAAACTATGACAAACGTATGGTATTTCTGCCGAGGGATTTCCATCGATAATGTTGGGGACAACCTCTTCCTTATCAATCCACAATCCATCGGGGGAAGAGACAGAATCGTGGAAGAAAGTCCATGGTGTTTTGACGGTAATTTAATACTACTCAAAGCCCCAACAACTTTTGATTTACCGGAAGATATAATTTTTGATGAACCAAATTTTTGGGTTCAATTCCACAATCTTCCGCTTGGATTACGAAACGACTCAGTAGCACAAATGCTTGGAAGCCGAATAGGGACTGTTCTGAGAATTGATACGAACGAATTGAATGAATGTTGGGGTCGTTTTCTTCGAGTACGGATAAAGATGAAGATTGACGAGCCTTTATGTAGGGGATTAACTATCAATGGCGGACCATCGAGAAAAATCATGGTGGCAATTAAATACGAGAGATTACCAGATTTCTGTTATTTTTGCGGAATGATTGACCACAACGATGGTTCATGCCCACTGCTAAAAACACAGGTGAAACCAGAAAAACAGTTTGGATCATGGATGCGAGCGGCTACTCCTCCAAGGAAAAATCGTGTTTACGCAAGCGGCCGAGGTTTCGATGGGTACCGAGGGGGCAGAGGACGTTTTGGAAACAAATGGTGGACCAAACAATCGTGGCGATCTGAACCAATGGCGGATGAACGAGACTCCGGCCACGATTTCGATCACGATGAAGACGTTGATTCAGTCGATTCACAAAACTTGAAAGGACGCAGTGGCGAACAACAAGCTGAAACCGATCACCGGACGGCCACTGCAACCGGCGTTGACAACCTGTCTCCTCTGCATTCAAAGCTACAAACGAAAAAGACGGGTATTAAATGTCCAGTATCCTTAGGAAACGCTAATATCACGTTTTCTTTCCAAAAAAATGCAGATGGCGTTTTTCTCGGAAATGAGGGTGATGGAATAAATGATTGCAACGACCAGAGATCCCTAAAAACCAGCGAAATCATAGAGGGTGAAGGGAAAGTTAGCGGCGGCAAGCTATTAGGAGATTTAGGGCAAATGGTTACTGATGCTCATGAAAATCAACTTGGGCCCATTGCAAAGGATAATACCATCTCAGCCCACATAACCACTTGCCCAGATCAGTCCAGTGAGCAGCATTTAAATGTGAACCTTGAATCTATTAATGGGCCAACTAATTCAAGCCCAATTTCCTCTAATGATCAGCAGCAGCGGACGAAACCACATGACCCAATTTCCCACGAAGACACTAGAATGGTCGAAATCTGGCCCGATTTTCAGTCTAGTCAAACGGAAATTTTCATGACTAACGATAAACAGAAGCAGCCCACAAGCGTTGTCTCAGAAAGTGGACAAAAGGGAAAGCAGGAAGAAGACATTTATAGTTTCAAGCCGTTAAAAGGTTGGAAAAGAAGAAATAGGCAGGAAGAACATATGGAGGCTGACCAATCCACATCTTACACGAAATTGTTTAGGAAAAAAAGAGCTGCAGAGGATGAGAATTTGACAGGAAGCTCAGACAAGAAATTCAAATCTCAAATTCCACTAAACAATGAAATTCTATCGGCGGAGCCTGATCAACAGGCCCGCCGGGAGCCATGA ATGAAAAAAGAGGCCCACGCCCCCCTTCGCTCTTCTCCTCGGCCTCGACCCATTGCCGAGGCTGAGGAAGAGGTCGGCCTCGACCCAATGCCGAGGGCGACCAAGGGCATGGGCCTAAGCCCGTTGTGGATCGACCCATCGTTGTCTCTCAGAGCTCTAAGTTTCTACTGTTCTCCGATCAGAGGAGTTTCTCTCAGGCTGGTTTTTGCAGCCTGCCTTCTTCCTTCCTCTGAAGGATTATTGCCAAATATGGATGTAATCGAAAAGCTCTCCACGCTCAAACTTTCACAGAAGGAATCTAGTGGAATAAACTCATCGGAGTTAGGCTTGTCTGAAAGCCAGACTAAGCTCCAAAATTGTTTGGTAGGCAAGGTTGTATCTCAAAGAATTATCAACATTGATGCTTTTCGGAAAACTATGACAAACGTATGGTATTTCTGCCGAGGGATTTCCATCGATAATGTTGGGGACAACCTCTTCCTTATCAATCCACAATCCATCGGGGGAAGAGACAGAATCGTGGAAGAAAGTCCATGGTGTTTTGACGGTAATTTAATACTACTCAAAGCCCCAACAACTTTTGATTTACCGGAAGATATAATTTTTGATGAACCAAATTTTTGGGTTCAATTCCACAATCTTCCGCTTGGATTACGAAACGACTCAGTAGCACAAATGCTTGGAAGCCGAATAGGGACTGTTCTGAGAATTGATACGAACGAATTGAATGAATGTTGGGGTCGTTTTCTTCGAGTACGGATAAAGATGAAGATTGACGAGCCTTTATGTAGGGGATTAACTATCAATGGCGGACCATCGAGAAAAATCATGGTGGCAATTAAATACGAGAGATTACCAGATTTCTGTTATTTTTGCGGAATGATTGACCACAACGATGGTTCATGCCCACTGCTAAAAACACAGGTGAAACCAGAAAAACAGTTTGGATCATGGATGCGAGCGGCTACTCCTCCAAGGAAAAATCGTGTTTACGCAAGCGGCCGAGGTTTCGATGGGTACCGAGGGGGCAGAGGACGTTTTGGAAACAAATGGTGGACCAAACAATCGTGGCGATCTGAACCAATGGCGGATGAACGAGACTCCGGCCACGATTTCGATCACGATGAAGACGTTGATTCAGTCGATTCACAAAACTTGAAAGGACGCAGTGGCGAACAACAAGCTGAAACCGATCACCGGACGGCCACTGCAACCGGCGTTGACAACCTGTCTCCTCTGCATTCAAAGCTACAAACGAAAAAGACGGGTATTAAATGTCCAGTATCCTTAGGAAACGCTAATATCACGTTTTCTTTCCAAAAAAATGCAGATGGCGTTTTTCTCGGAAATGAGGGTGATGGAATAAATGATTGCAACGACCAGAGATCCCTAAAAACCAGCGAAATCATAGAGGGTGAAGGGAAAGTTAGCGGCGGCAAGCTATTAGGAGATTTAGGGCAAATGGTTACTGATGCTCATGAAAATCAACTTGGGCCCATTGCAAAGGATAATACCATCTCAGCCCACATAACCACTTGCCCAGATCAGTCCAGTGAGCAGCATTTAAATGTGAACCTTGAATCTATTAATGGGCCAACTAATTCAAGCCCAATTTCCTCTAATGATCAGCAGCAGCGGACGAAACCACATGACCCAATTTCCCACGAAGACACTAGAATGGTCGAAATCTGGCCCGATTTTCAGTCTAGTCAAACGGAAATTTTCATGACTAACGATAAACAGAAGCAGCCCACAAGCGTTGTCTCAGAAAGTGGACAAAAGGGAAAGCAGGAAGAAGACATTTATAGTTTCAAGCCGTTAAAAGGTTGGAAAAGAAGAAATAGGCAGGAAGAACATATGGAGGCTGACCAATCCACATCTTACACGAAATTGTTTAGGAAAAAAAGAGCTGCAGAGGATGAGAATTTGACAGGAAGCTCAGACAAGAAATTCAAATCTCAAATTCCACTAAACAATGAAATTCTATCGGCGGAGCCTGATCAACAGGCCCGCCGGGAGCCATGA MKKEAHAPLRSSPRPRPIAEAEEEVGLDPMPRATKGMGLSPLWIDPSLSLRALSFYCSPIRGVSLRLVFAACLLPSSEGLLPNMDVIEKLSTLKLSQKESSGINSSELGLSESQTKLQNCLVGKVVSQRIINIDAFRKTMTNVWYFCRGISIDNVGDNLFLINPQSIGGRDRIVEESPWCFDGNLILLKAPTTFDLPEDIIFDEPNFWVQFHNLPLGLRNDSVAQMLGSRIGTVLRIDTNELNECWGRFLRVRIKMKIDEPLCRGLTINGGPSRKIMVAIKYERLPDFCYFCGMIDHNDGSCPLLKTQVKPEKQFGSWMRAATPPRKNRVYASGRGFDGYRGGRGRFGNKWWTKQSWRSEPMADERDSGHDFDHDEDVDSVDSQNLKGRSGEQQAETDHRTATATGVDNLSPLHSKLQTKKTGIKCPVSLGNANITFSFQKNADGVFLGNEGDGINDCNDQRSLKTSEIIEGEGKVSGGKLLGDLGQMVTDAHENQLGPIAKDNTISAHITTCPDQSSEQHLNVNLESINGPTNSSPISSNDQQQRTKPHDPISHEDTRMVEIWPDFQSSQTEIFMTNDKQKQPTSVVSESGQKGKQEEDIYSFKPLKGWKRRNRQEEHMEADQSTSYTKLFRKKRAAEDENLTGSSDKKFKSQIPLNNEILSAEPDQQARREP Homology
BLAST of Lag0018857 vs. NCBI nr
Match: OMO61345.1 (reverse transcriptase [Corchorus capsularis]) HSP 1 Score: 184.1 bits (466), Expect = 4.0e-42 Identity = 101/343 (29.45%), Postives = 175/343 (51.02%), Query Frame = 0
BLAST of Lag0018857 vs. NCBI nr
Match: OMP03234.1 (hypothetical protein COLO4_10561 [Corchorus olitorius]) HSP 1 Score: 181.8 bits (460), Expect = 2.0e-41 Identity = 84/254 (33.07%), Postives = 146/254 (57.48%), Query Frame = 0
BLAST of Lag0018857 vs. NCBI nr
Match: XP_040990949.1 (uncharacterized protein LOC121238174 [Juglans microcarpa x Juglans regia]) HSP 1 Score: 176.0 bits (445), Expect = 1.1e-39 Identity = 87/244 (35.66%), Postives = 136/244 (55.74%), Query Frame = 0
BLAST of Lag0018857 vs. NCBI nr
Match: XP_038708494.1 (uncharacterized protein LOC120003548 [Tripterygium wilfordii]) HSP 1 Score: 174.5 bits (441), Expect = 3.1e-39 Identity = 84/246 (34.15%), Postives = 142/246 (57.72%), Query Frame = 0
BLAST of Lag0018857 vs. NCBI nr
Match: TXG60685.1 (hypothetical protein EZV62_015258 [Acer yangbiense]) HSP 1 Score: 174.5 bits (441), Expect = 3.1e-39 Identity = 91/225 (40.44%), Postives = 131/225 (58.22%), Query Frame = 0
BLAST of Lag0018857 vs. ExPASy TrEMBL
Match: A0A1R3GTB5 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23588 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.9e-42 Identity = 101/343 (29.45%), Postives = 175/343 (51.02%), Query Frame = 0
BLAST of Lag0018857 vs. ExPASy TrEMBL
Match: A0A1R3K847 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10561 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 9.5e-42 Identity = 84/254 (33.07%), Postives = 146/254 (57.48%), Query Frame = 0
BLAST of Lag0018857 vs. ExPASy TrEMBL
Match: A0A5C7HUW5 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_015258 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.5e-39 Identity = 91/225 (40.44%), Postives = 131/225 (58.22%), Query Frame = 0
BLAST of Lag0018857 vs. ExPASy TrEMBL
Match: A0A2N9F689 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10176 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 2.6e-39 Identity = 120/387 (31.01%), Postives = 185/387 (47.80%), Query Frame = 0
BLAST of Lag0018857 vs. ExPASy TrEMBL
Match: A0A6J5TXP7 (CCHC-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS13519 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 3.7e-38 Identity = 82/259 (31.66%), Postives = 135/259 (52.12%), Query Frame = 0
BLAST of Lag0018857 vs. TAIR 10
Match: AT2G01050.1 (zinc ion binding;nucleic acid binding ) HSP 1 Score: 74.7 bits (182), Expect = 3.1e-13 Identity = 48/187 (25.67%), Postives = 84/187 (44.92%), Query Frame = 0
BLAST of Lag0018857 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding ) HSP 1 Score: 72.0 bits (175), Expect = 2.0e-12 Identity = 34/141 (24.11%), Postives = 65/141 (46.10%), Query Frame = 0
BLAST of Lag0018857 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 71.6 bits (174), Expect = 2.7e-12 Identity = 39/132 (29.55%), Postives = 58/132 (43.94%), Query Frame = 0
BLAST of Lag0018857 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding ) HSP 1 Score: 52.0 bits (123), Expect = 2.2e-06 Identity = 32/131 (24.43%), Postives = 54/131 (41.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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