Lag0018787 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0018787
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionTranscription factor
Locationchr5: 34346919 .. 34351279 (+)
RNA-Seq ExpressionLag0018787
SyntenyLag0018787
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCAAAAGAGAGGAAGTAAGGGAGAAGAAAAGAAAAAAAATTATAGTCGCCGGCGGCCGACCGGTGGCGGCGAGCGGTGGCCGGCCGCCGGAGATGTGAAGAAGAAGATGGAGGGGTTGAGGGAAGAAGATGAAGAAGTGGGTGGAGAGTTTTTTATTATTTTTTATTGTTTTTCTTTATTTTTATTTTAAAATTAAAAAAATTTGACCACATCAGCAATCTGTTAGCATTTAACAGAAAATTGGACGGCAGGGACCAAAATGCTCCTTATCTCAAACCTCAGGAGTATTTTTGTTGAGTTTGAAAACTCAGGGACCAAAGTGTCACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCGCTGTTGTAATTACCAAATGAACAACCATAGATTTTCAACCTCATCTTTGATAAACATATGTTTTCTTTGATTTGTATTCTTTTATTTTTAATCAAAATCCCTATTACCAAATCAAACGTTTAATAATAGAAATAGGTTTTATATATAATGTTGATGCCAAAATTTGGCCAAGCAATCCACCTGCCCTTCACGTGACACCAACAATGAATTTGTAGAAGCTGGGGAAGACGTGACCTGCAAGACCAGCAAGAATCGCTGGACACCGGTGTGGTGTAGGCCACACCACCTCCGATGCCTAAGTCAGGAAACTGAGCAGCTAGAGAATAGAGAAAGAAGTCAAGAATCGACTTTTCGGCCCCCTTCTTCGATGACGAAGAGGGGTATAAATACCTGCTCGGACTCCTAGGGTTTGGAGGCGTTCGGGGACGAAGCAGGCTGGACCGAGGTAGCTGGAAGCGATAGGGGCCAAGCGGAGGCAAACGGACTCGGCCCGCGCAAACGGGCCGAGTGGTCGGCCTCGGCCTTGGGCCGAGGCCGACCATAATGCTCGGCCTCGGCCTAAGGCCGAGGCCGACCGTACGGGTCGGGCCACGTTGGCCCGGCCCGTCGGTATGGTTTCCCTCTGGGTCCCTTTCCTGGTCCTATCTCCTCTCGGTTGTCCTGTCAGCTCCTCGTACGCTGTGGTGGTCCAAAATTACCTATAACATATAATTTCACAATTTAAAAATTTATCTAATATTTAAGAACTTGATAGGTATCTCTAAAACAATAGTGAATAATGCAAATCACTACAACAAATTATAGCTTTAATGTCGGACAAAAAAATGGGCGCGGGGCTTTTAATGTCGGACAAAAAAACACGCGGGCCTTTTAATGTCGGACGCGCGCATTTTGAAATTTTCAGACATTTAATGTCGGGCAATGCCCGACATTAAAAGCACTACAACAATTAATACATTTGATGTCGGACAGAAAAAAATGCTGAGGACTTTTAATGTCGGACGAAAAAACACGCTGAATTTTTAATGTCGGACGCACATTTTTAAAAATTTTGGGCTTTTAATGTCGGGCATAAAGGTTGCCTTTATTGTTGGTTTCTAGGGTTTTTTTTAAAGAACTATTTATGCTCTCTCTCCCTGAAAAACTTGAAAACCCTCACGATCTCCCCCTCTCTCAATACCCGCGAGTTGGGCCACAAATCCGACGGCCAGACCATCGAGTGGCTCCTCCGTCAAGCCGAGCCCTCCATCATCGCCGCCACTGGCACCGGCACCACTCCTGCTAGCTTCTCCACTATCTCCGCCTCCCTCCGCGGCGGTCCCACTGCCGCCGCTTCCTCTTCTTCCTCCCCTTCTCTCGACCACAAGCCGCTTCTCGCTCCCGCGCCCTTCATTCTCGGCAAGCGCGTCAGGACCAACGACGATGGAGGGAGTAAAGACGACGACGGCGGTGGCGCTGGCGTTGGCATTTCGGTTGGACCCTCTGTCGGTTCGATTATGGGTCCGGCTGCCGCGGGTGGGTACTGGGTGATTCCTGCGAGGCCGGATTTCGGACAGGTGTGGAGCTTCGCCGCCGCCGCGGCTCCCGAGATGGTGATTCAGCCGGCGGCGGTTTCTCATCAGGCGTTGCTGTTCGTTCAACATTCATTTTTTAAGGTGAGTTGATTATTTTTTGATCTTAATGCCCACATATTCATGAAAATATTCATGTAAACATATGCTTAAGTAAACAAAATATACTGATTTCTTACTCGAGGATGCACTGCTCATGTTGTGTGAATAAACAGGTATGCTTGGATTATTGGAACTCCTTGGTTCTGGAACTGTTTGAGGCACATCATAATATGGATAATCTTGCTGTGTCAGCAAACATGATGGGATTGCAGGTATGGTTGTCATGTTGTTTGTCTAATAGTTGCCACTCAGATTAATGGAGTATTTGTGTCCTTGAGCTTTGTACAGTTAAAATTTCTTTGTTCAATTGGTAATCTACCTCAGGATTTAAGAAGGTGGGTATAGATATTATGCAGAATGACTACGTTTGCAACTCTCTTGTATGGAATTGAATTAAAGTAAATGTCTGGCTGGAAAAATATTGCAATGTCTGGAATACCTGGAATGAAGAATTTTATTATTTTTGTTGCTTATAGTATTTTTGTACTCGATATGTCTGGCCTTTTTTTAATAATGTTTGAAAACTTTTGAAAATTTTCATGTTATTTGGGTACATATTTTCCACCCTGTCCTTGACGTAGTGAATTTCAAGTTCAACCACGATTTCCTCGATGGTATATTTGCAGAAATATATAAAAGTGTTTCTTATAGTTGAGTTCTCTGACTCCCTCCCTCCAATTTGATGACCAGGTGCCTTTGATTTCTGGTGTGGTTGATGGCCTTGGATCACAACTCATGCAGAGGAGGCAGCTTTATTCTGGTCCTATGTCAAAGTTGAGAATGCTTATGATATGTCGCATGGCTAAACCTGAAGAGGTGCTCATCGTTGAGGATGAGAATGGAAACATTGTTCGAGAAACCATGAAGGATAATGATGTCCTTGTTCAGTATAAGGTTATTAATCTAAACTACTACTTAATTGTTTTTTTTTGGTGGGGCGGGTGGGTGGGGGGAAGAGTGTAATTGAGTGATTCACAGAGGTATGGGCAAGAATGAACTTTAATAACCGTGGATAAGAGCTCCTTTCTTGATAAGGGTTTTGAACTCATTTTTGGCTTCATTGTGAGGGGCCCATTGACTTGTTATTCTGGGATGCTGTTTTTATGTGGTGTTATGCATTTTTAAGGGGTTGGGAGGCTCTTGGGCGTGTTTTTAGGGCCACCCTTGATCTTCTTATTGCATACAAGGATCAAGTTGCAGGTCTCTCTTTCACTCTCTCCCTCTCCCTCTTTTTTATTTATATCTATAATTTCTGGCCAAATTCTTTTGACTTTAGATTAGAGTTCAAGTAGATGGCTTGTTTTTCCTCTTTTCATATTCTTCTCTCTCTTTTGCCAACATTAAAAAAATTGTGTCCAATATTCTCAAGTAACTTGATTTGTGGGAAGTAACTTGAAAAACTGAATTCTCTATGATTTTGATCTAGTGGGTTCAAAATTTTATTTTGGTCATTTTGTTATTAGAGTATTTTTAGACGTGTAATTCTTTTCAACCATCAATGGAAAGTTTGTTTCATGTTCAATTCAGAAAAATGTTGATTCCTATGCCTGCACCTCTTGGCAACTTTACTCGTACGTCTTGAGCTTTAATTTTAGTCTAAGGATTTGATTGGAGATGTGTGTCAATTGTATTTTACTTACGTTTTTTCTTTGTATAAGGTTTGAAATTCAACTTGTTAAGCGTTAACTGTTGCAGACGATGAAATGAATTTTCTCGAAAAGGAGCTTTAAGAGGAACTTAGGAAAGAGCGTGTCAATTGTATTTTACTGATAACTGTTGTCTAGATTTTGTCATTTGCTGGCTGAAAATTAGGAAAATATTTGCTTTGTTGAAGTCAACCTCATGCCTTTGTCAATTAGGAAAATATTTGCTTTGTTGAAGTCAACCTCGTACATCGATGAATGTACAGGTTGTTGATAGTAAGTGTTATAAAAGAAGATTTTTCTGAATTGTTAGTTGCTTTAATAGAGTTTGCTGAATTTACAGGTTGCTACAAAATTGTTAGTTGCTTTAATAGAGTTTGCTGAATTGGGACTAATTTTTTACCTTACTTTAGTAGCATATATGTGATTCAAGAAGTCAGATTGGTGGGGTGACTTATTTCTACACTTGATCTTTTTATCTAGTCTGTTCTTTTTTTTTTTTTTTTGTTAATAAGTTTACCCTGTCATATTCTTGTCATTTCACGATTGTGTTTTACTCACGTTTTTGCTTTGTATAAGGTTTGGAATTCATCTTGTTAAGCGAGAACTGTTGCAGATGATGAAATGGATATTCTCGAAAAGGAGCTCGAAGAGGAACTTGGTCGGAAGAGTGTAG

mRNA sequence

ATGGGGCAAAAGAGAGGAAGTAAGGGAGAAGAAAAGAAAAAAAATTATAGTCGCCGGCGGCCGACCGGTGGCGGCGAGCGGTGGCCGGCCGCCGGAGATGTGAAGAAGAAGATGGAGGGGTTGAGGGAAGAAGATGAAGAACAATCCACCTGCCCTTCACGTGACACCAACAATGAATTTGTAGAAGCTGGGGAAGACGTGACCTGCAAGACCAGCAAGAATCGCTGGACACCGGTGTGGTGTAGGCCACACCACCTCCGATGCCTAAGTCAGGAAACTGAGCAGCTAGAGAATAGAGAAAGAAGTCAAGAATCGACTTTTCGGCCCCCTTCTTCGATGACGAAGAGGGGGGCCAAGCGGAGGCAAACGGACTCGGCCCGCGCAAACGGGCCGAGTGGTCGGCCTCGGCCTTGGGCCGAGGCCGACCATAATGCTCGGCCTCGGCCTAAGGCCGAGGCCGACCGTACGGGTCGGGCCACGTTGGCCCGGCCCGTCGGGTTTTTTTTAAAGAACTATTTATGCTCTCTCTCCCTGAAAAACTTGAAAACCCTCACGATCTCCCCCTCTCTCAATACCCGCGAGTTGGGCCACAAATCCGACGGCCAGACCATCGAGTGGCTCCTCCGTCAAGCCGAGCCCTCCATCATCGCCGCCACTGGCACCGGCACCACTCCTGCTAGCTTCTCCACTATCTCCGCCTCCCTCCGCGGCGGTCCCACTGCCGCCGCTTCCTCTTCTTCCTCCCCTTCTCTCGACCACAAGCCGCTTCTCGCTCCCGCGCCCTTCATTCTCGGCAAGCGCGTCAGGACCAACGACGATGGAGGGAGTAAAGACGACGACGGCGGTGGCGCTGGCGTTGGCATTTCGGTTGGACCCTCTGTCGGTTCGATTATGGGTCCGGCTGCCGCGGGTGGGTACTGGGTGATTCCTGCGAGGCCGGATTTCGGACAGGTGTGGAGCTTCGCCGCCGCCGCGGCTCCCGAGATGGTGATTCAGCCGGCGGCGGTTTCTCATCAGGCGTTGCTGTTCGTTCAACATTCATTTTTTAAGGTATGCTTGGATTATTGGAACTCCTTGGTTCTGGAACTGTTTGAGGCACATCATAATATGGATAATCTTGCTGTGTCAGCAAACATGATGGGATTGCAGGTGCCTTTGATTTCTGGTGTGGTTGATGGCCTTGGATCACAACTCATGCAGAGGAGGCAGCTTTATTCTGGTCCTATGTCAAAGTTGAGAATGCTTATGATATGTCGCATGGCTAAACCTGAAGAGGTGCTCATCGTTGAGGATGAGAATGGAAACATTGTTCGAGAAACCATGAAGGATAATGATGTCCTTGTTCAGTATAAGAAAAATGTTGATTCCTATGCCTGCACCTCTTGGCAACTTTACTCGTTTGGAATTCATCTTGTTAAGCGAGAACTGTTGCAGATGATGAAATGGATATTCTCGAAAAGGAGCTCGAAGAGGAACTTGGTCGGAAGAGTGTAG

Coding sequence (CDS)

ATGGGGCAAAAGAGAGGAAGTAAGGGAGAAGAAAAGAAAAAAAATTATAGTCGCCGGCGGCCGACCGGTGGCGGCGAGCGGTGGCCGGCCGCCGGAGATGTGAAGAAGAAGATGGAGGGGTTGAGGGAAGAAGATGAAGAACAATCCACCTGCCCTTCACGTGACACCAACAATGAATTTGTAGAAGCTGGGGAAGACGTGACCTGCAAGACCAGCAAGAATCGCTGGACACCGGTGTGGTGTAGGCCACACCACCTCCGATGCCTAAGTCAGGAAACTGAGCAGCTAGAGAATAGAGAAAGAAGTCAAGAATCGACTTTTCGGCCCCCTTCTTCGATGACGAAGAGGGGGGCCAAGCGGAGGCAAACGGACTCGGCCCGCGCAAACGGGCCGAGTGGTCGGCCTCGGCCTTGGGCCGAGGCCGACCATAATGCTCGGCCTCGGCCTAAGGCCGAGGCCGACCGTACGGGTCGGGCCACGTTGGCCCGGCCCGTCGGGTTTTTTTTAAAGAACTATTTATGCTCTCTCTCCCTGAAAAACTTGAAAACCCTCACGATCTCCCCCTCTCTCAATACCCGCGAGTTGGGCCACAAATCCGACGGCCAGACCATCGAGTGGCTCCTCCGTCAAGCCGAGCCCTCCATCATCGCCGCCACTGGCACCGGCACCACTCCTGCTAGCTTCTCCACTATCTCCGCCTCCCTCCGCGGCGGTCCCACTGCCGCCGCTTCCTCTTCTTCCTCCCCTTCTCTCGACCACAAGCCGCTTCTCGCTCCCGCGCCCTTCATTCTCGGCAAGCGCGTCAGGACCAACGACGATGGAGGGAGTAAAGACGACGACGGCGGTGGCGCTGGCGTTGGCATTTCGGTTGGACCCTCTGTCGGTTCGATTATGGGTCCGGCTGCCGCGGGTGGGTACTGGGTGATTCCTGCGAGGCCGGATTTCGGACAGGTGTGGAGCTTCGCCGCCGCCGCGGCTCCCGAGATGGTGATTCAGCCGGCGGCGGTTTCTCATCAGGCGTTGCTGTTCGTTCAACATTCATTTTTTAAGGTATGCTTGGATTATTGGAACTCCTTGGTTCTGGAACTGTTTGAGGCACATCATAATATGGATAATCTTGCTGTGTCAGCAAACATGATGGGATTGCAGGTGCCTTTGATTTCTGGTGTGGTTGATGGCCTTGGATCACAACTCATGCAGAGGAGGCAGCTTTATTCTGGTCCTATGTCAAAGTTGAGAATGCTTATGATATGTCGCATGGCTAAACCTGAAGAGGTGCTCATCGTTGAGGATGAGAATGGAAACATTGTTCGAGAAACCATGAAGGATAATGATGTCCTTGTTCAGTATAAGAAAAATGTTGATTCCTATGCCTGCACCTCTTGGCAACTTTACTCGTTTGGAATTCATCTTGTTAAGCGAGAACTGTTGCAGATGATGAAATGGATATTCTCGAAAAGGAGCTCGAAGAGGAACTTGGTCGGAAGAGTGTAG

Protein sequence

MGQKRGSKGEEKKKNYSRRRPTGGGERWPAAGDVKKKMEGLREEDEEQSTCPSRDTNNEFVEAGEDVTCKTSKNRWTPVWCRPHHLRCLSQETEQLENRERSQESTFRPPSSMTKRGAKRRQTDSARANGPSGRPRPWAEADHNARPRPKAEADRTGRATLARPVGFFLKNYLCSLSLKNLKTLTISPSLNTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTNDDGGSKDDDGGGAGVGISVGPSVGSIMGPAAAGGYWVIPARPDFGQVWSFAAAAAPEMVIQPAAVSHQALLFVQHSFFKVCLDYWNSLVLELFEAHHNMDNLAVSANMMGLQVPLISGVVDGLGSQLMQRRQLYSGPMSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKKNVDSYACTSWQLYSFGIHLVKRELLQMMKWIFSKRSSKRNLVGRV
Homology
[Close]
BLAST of Lag0018787 vs. NCBI nr
Match: XP_038876310.1 (transcription factor TCP21-like [Benincasa hispida])

HSP 1 Score: 248.8 bits (634), Expect = 9.6e-62
Identity = 134/154 (87.01%), Postives = 139/154 (90.26%), Query Frame = 0 

Query: 192 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSL 251
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRG P  A+SSSS  SL
Sbjct: 73  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGTPAVASSSSS--SL 132

Query: 252 DHKPLLAPAPFILGKRVRTNDDGGSKDDDGGGAGVGISVGPSVGSIMGPAAAGGYWVIPA 311
           DHKPLLAPAPFILGKRVRT+DDG +KDD GGG   GISVGP++GSIMGPAA GGYW IPA
Sbjct: 133 DHKPLLAPAPFILGKRVRTDDDGANKDDSGGG---GISVGPTIGSIMGPAATGGYWAIPA 192

Query: 312 RPDFGQVWSFAAAAAPEMVIQPAAVSHQALLFVQ 346
           R DFGQVWSFAAAAAPEMVIQP AVSHQA LFVQ
Sbjct: 193 RSDFGQVWSFAAAAAPEMVIQPTAVSHQASLFVQ 221

[Close]
BLAST of Lag0018787 vs. NCBI nr
Match: XP_022141345.1 (transcription factor TCP21-like [Momordica charantia])

HSP 1 Score: 248.4 bits (633), Expect = 1.3e-61
Identity = 136/157 (86.62%), Postives = 140/157 (89.17%), Query Frame = 0 

Query: 192 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSL 251
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTIS SLRG    + S SSS SL
Sbjct: 68  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISGSLRGVVGCSTSLSSSSSL 127

Query: 252 DHKPLLAPAPFILGKRVRTNDDGGSKDDDGGGAGVGISVGPSVGSIMGPAAAGGYWVIPA 311
           DHKPLLAPAPFILGKRVRT+DDGGSKDD GGG   GISVGP+VGSIMGPAAAGGYW IPA
Sbjct: 128 DHKPLLAPAPFILGKRVRTDDDGGSKDDGGGGG--GISVGPTVGSIMGPAAAGGYWAIPA 187

Query: 312 RPDFGQVWSF---AAAAAPEMVIQPAAVSHQALLFVQ 346
           RPDFGQVWSF   AAAAAPEMV+QPAAVSHQA LFVQ
Sbjct: 188 RPDFGQVWSFAAAAAAAAPEMVLQPAAVSHQASLFVQ 222

[Close]
BLAST of Lag0018787 vs. NCBI nr
Match: XP_022990893.1 (transcription factor TCP21-like [Cucurbita maxima])

HSP 1 Score: 236.9 bits (603), Expect = 3.8e-58
Identity = 131/160 (81.88%), Postives = 134/160 (83.75%), Query Frame = 0 

Query: 192 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSL 251
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTI ASLRG P A  SSSS  SL
Sbjct: 104 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTP-ATLSSSSPASL 163

Query: 252 DHKPLLAPAPFILGKRVRTNDDGGSKDDDGGGAGVG------ISVGPSVGSIMGPAAAGG 311
           DHKPLL PAPFILGKRVR +DD G KD+DGGG G G      ISVGPSVGSIMG AAAGG
Sbjct: 164 DHKPLLPPAPFILGKRVRPDDDAGHKDNDGGGGGGGNGGGGAISVGPSVGSIMGSAAAGG 223

Query: 312 YWVIPARPDFGQVWSFAAAAAPEMVIQPAAVSHQALLFVQ 346
           YW  PAR DFGQVWSFAAAAAPEMVIQP A+SHQA LF Q
Sbjct: 224 YWAFPARSDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQ 262

[Close]
BLAST of Lag0018787 vs. NCBI nr
Match: XP_023520182.1 (transcription factor TCP21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.7 bits (600), Expect = 8.4e-58
Identity = 130/161 (80.75%), Postives = 134/161 (83.23%), Query Frame = 0 

Query: 192 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSL 251
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTI ASLRG P   A+ SSS SL
Sbjct: 67  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTP---AALSSSASL 126

Query: 252 DHKPLLAPAPFILGKRVRTNDDGGSKDDDGGGAGVG-------ISVGPSVGSIMGPAAAG 311
           DHKPLL PAPFILGKRVR +DD G KD+DG G G G       ISVGPSVGSIMG AAAG
Sbjct: 127 DHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAAAG 186

Query: 312 GYWVIPARPDFGQVWSFAAAAAPEMVIQPAAVSHQALLFVQ 346
           GYW  PARPDFGQVWSFAAAAAPEMVIQP A+SHQA LF Q
Sbjct: 187 GYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQ 224

[Close]
BLAST of Lag0018787 vs. NCBI nr
Match: XP_022923377.1 (transcription factor TCP21-like [Cucurbita moschata] >KAG6601984.1 Transcription factor TCP7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032682.1 Transcription factor TCP7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235.7 bits (600), Expect = 8.4e-58
Identity = 130/161 (80.75%), Postives = 134/161 (83.23%), Query Frame = 0 

Query: 192 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSL 251
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTI ASLRG P   A+ SSS SL
Sbjct: 66  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTP---AALSSSASL 125

Query: 252 DHKPLLAPAPFILGKRVRTNDDGGSKDDDGGGAGVG-------ISVGPSVGSIMGPAAAG 311
           DHKPLL PAPFILGKRVR +DD G KD+DG G G G       ISVGPSVGSIMG AAAG
Sbjct: 126 DHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAAAG 185

Query: 312 GYWVIPARPDFGQVWSFAAAAAPEMVIQPAAVSHQALLFVQ 346
           GYW  PARPDFGQVWSFAAAAAPEMVIQP A+SHQA LF Q
Sbjct: 186 GYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQ 223

[Close]
BLAST of Lag0018787 vs. ExPASy Swiss-Prot
Match: Q9SMV6 (Protein EXPORTIN 1A OS=Arabidopsis thaliana OX=3702 GN=XPO1 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.2e-41
Identity = 89/103 (86.41%), Postives = 95/103 (92.23%), Query Frame = 0 

Query: 349 FKVCLDYWNSLVLELFEAHHNMDNLAVSANMMGLQVPLISGVVDGLGSQLMQRRQLYSGP 408
           FKVCLDYWNSLVLELF+AHHN DN AVSA++MGLQ P + G+VDGLGSQ+MQRRQLYS P
Sbjct: 357 FKVCLDYWNSLVLELFDAHHNSDNPAVSASLMGLQ-PFLPGMVDGLGSQVMQRRQLYSHP 416

Query: 409 MSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYK 452
           MSKLR LMI RMAKPEEVLIVEDENGNIVRETMKDNDVLVQYK
Sbjct: 417 MSKLRGLMINRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYK 458

[Close]
BLAST of Lag0018787 vs. ExPASy Swiss-Prot
Match: Q9FTA2 (Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 4.4e-33
Identity = 87/156 (55.77%), Postives = 100/156 (64.10%), Query Frame = 0 

Query: 192 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSL 251
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFST S S                 
Sbjct: 59  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLS----------------- 118

Query: 252 DHKPLLAPAPFILGKRVRTNDDGGSKDDDGGGAGVGISVGPSVG-SIMGPAAAGGYWVIP 311
                   +PF LGKRV   ++G    + GGG G G++VG ++G S+MG   +GG+W +P
Sbjct: 119 ------TSSPFTLGKRVVRAEEG----ESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVP 178

Query: 312 ARPDFGQVWSFAAAAAPEMVIQPAAVSHQALLFVQH 347
           ARPDFGQVWSFA  A PEMV   A     A LFV+H
Sbjct: 179 ARPDFGQVWSFATGAPPEMVF--AQQQQPATLFVRH 185

[Close]
BLAST of Lag0018787 vs. ExPASy Swiss-Prot
Match: Q9FMX2 (Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.7e-32
Identity = 88/156 (56.41%), Postives = 101/156 (64.74%), Query Frame = 0 

Query: 192 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSL 251
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFST S S+RG       +++S SL
Sbjct: 67  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRG-------ATNSTSL 126

Query: 252 DHKP---LLAPAPFILGKRVRTNDDGGSKDDDGGGAGVGISVGPSVGSIMGPAAAGGYWV 311
           DHKP   L   +PFILGKRVR ++D  +  +         SVG        PA   G+W 
Sbjct: 127 DHKPTSLLGGTSPFILGKRVRADEDSNNSHNHS-------SVGKDETFTTTPA---GFWA 186

Query: 312 IPARPDFGQVWSFAAAAAPEMVIQPAAVSHQALLFV 345
           +PARPDFGQVWSF  A AP+ +       HQ  LFV
Sbjct: 187 VPARPDFGQVWSF--AGAPQEMFLQQQHHHQQPLFV 203

[Close]
BLAST of Lag0018787 vs. ExPASy Swiss-Prot
Match: F4IZR5 (Protein EXPORTIN 1B OS=Arabidopsis thaliana OX=3702 GN=XPO1B PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.4e-31
Identity = 70/103 (67.96%), Postives = 84/103 (81.55%), Query Frame = 0 

Query: 349 FKVCLDYWNSLVLELFEAHHNMDNLAVSANMMGLQVPLISGVVDGLGSQLMQRRQLYSGP 408
           FKVCLDYWNSLVLELF   H+  + A++ ++ GLQ+  +   VDG+ S++ +R++LYS P
Sbjct: 357 FKVCLDYWNSLVLELFGTRHHACHPALTPSLFGLQMAFLPSTVDGVKSEVTERQKLYSDP 416

Query: 409 MSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYK 452
           MSKLR LMI R AKPEEVLIVEDENGNIVRETMKDNDVLVQYK
Sbjct: 417 MSKLRGLMISRTAKPEEVLIVEDENGNIVRETMKDNDVLVQYK 459

[Close]
BLAST of Lag0018787 vs. ExPASy Swiss-Prot
Match: Q9C7G4 (Transcription factor TCP22 OS=Arabidopsis thaliana OX=3702 GN=TCP22 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.5e-14
Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 0 

Query: 192 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGP-----TAAASSS 251
           TRELGHKSDG+TIEWLL+QAEP+IIA+TGTGT PA+FST++ASLR G      + A+ SS
Sbjct: 91  TRELGHKSDGETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQASKSS 150

Query: 252 SSPSLDH 254
           SSP   H
Sbjct: 151 SSPLSFH 157

[Close]
BLAST of Lag0018787 vs. ExPASy TrEMBL
Match: A0A6J1CHT6 (transcription factor TCP21-like OS=Momordica charantia OX=3673 GN=LOC111011767 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.1e-62
Identity = 136/157 (86.62%), Postives = 140/157 (89.17%), Query Frame = 0 

Query: 192 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSL 251
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTIS SLRG    + S SSS SL
Sbjct: 68  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISGSLRGVVGCSTSLSSSSSL 127

Query: 252 DHKPLLAPAPFILGKRVRTNDDGGSKDDDGGGAGVGISVGPSVGSIMGPAAAGGYWVIPA 311
           DHKPLLAPAPFILGKRVRT+DDGGSKDD GGG   GISVGP+VGSIMGPAAAGGYW IPA
Sbjct: 128 DHKPLLAPAPFILGKRVRTDDDGGSKDDGGGGG--GISVGPTVGSIMGPAAAGGYWAIPA 187

Query: 312 RPDFGQVWSF---AAAAAPEMVIQPAAVSHQALLFVQ 346
           RPDFGQVWSF   AAAAAPEMV+QPAAVSHQA LFVQ
Sbjct: 188 RPDFGQVWSFAAAAAAAAPEMVLQPAAVSHQASLFVQ 222

[Close]
BLAST of Lag0018787 vs. ExPASy TrEMBL
Match: A0A6J1JUL9 (transcription factor TCP21-like OS=Cucurbita maxima OX=3661 GN=LOC111487646 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.8e-58
Identity = 131/160 (81.88%), Postives = 134/160 (83.75%), Query Frame = 0 

Query: 192 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSL 251
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTI ASLRG P A  SSSS  SL
Sbjct: 104 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTP-ATLSSSSPASL 163

Query: 252 DHKPLLAPAPFILGKRVRTNDDGGSKDDDGGGAGVG------ISVGPSVGSIMGPAAAGG 311
           DHKPLL PAPFILGKRVR +DD G KD+DGGG G G      ISVGPSVGSIMG AAAGG
Sbjct: 164 DHKPLLPPAPFILGKRVRPDDDAGHKDNDGGGGGGGNGGGGAISVGPSVGSIMGSAAAGG 223

Query: 312 YWVIPARPDFGQVWSFAAAAAPEMVIQPAAVSHQALLFVQ 346
           YW  PAR DFGQVWSFAAAAAPEMVIQP A+SHQA LF Q
Sbjct: 224 YWAFPARSDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQ 262

[Close]
BLAST of Lag0018787 vs. ExPASy TrEMBL
Match: A0A6J1E5Y0 (transcription factor TCP21-like OS=Cucurbita moschata OX=3662 GN=LOC111431092 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.1e-58
Identity = 130/161 (80.75%), Postives = 134/161 (83.23%), Query Frame = 0 

Query: 192 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSL 251
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTI ASLRG P   A+ SSS SL
Sbjct: 66  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTP---AALSSSASL 125

Query: 252 DHKPLLAPAPFILGKRVRTNDDGGSKDDDGGGAGVG-------ISVGPSVGSIMGPAAAG 311
           DHKPLL PAPFILGKRVR +DD G KD+DG G G G       ISVGPSVGSIMG AAAG
Sbjct: 126 DHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAAAG 185

Query: 312 GYWVIPARPDFGQVWSFAAAAAPEMVIQPAAVSHQALLFVQ 346
           GYW  PARPDFGQVWSFAAAAAPEMVIQP A+SHQA LF Q
Sbjct: 186 GYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQ 223

[Close]
BLAST of Lag0018787 vs. ExPASy TrEMBL
Match: A0A0A0KMY3 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G352090 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 5.9e-57
Identity = 129/158 (81.65%), Postives = 133/158 (84.18%), Query Frame = 0 

Query: 192 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSL 251
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLR  P A+ S       
Sbjct: 74  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRTPPAASLS------- 133

Query: 252 DHKPLLAPAPFILGKRVRTNDDGGSKDDDGGGAGVGISVGPSVGSIMGPAAAGGYWVIPA 311
           DHKPLL PAPFILGKRVRT+DDG +KDD  GGAG GISVGPS+GSIMGPA AGGYW IPA
Sbjct: 134 DHKPLLPPAPFILGKRVRTDDDGANKDDT-GGAGAGISVGPSIGSIMGPAVAGGYWAIPA 193

Query: 312 RPDFGQVWSF----AAAAAPEMVIQPAAVSHQALLFVQ 346
           R DFGQVWSF    AAAAAPEMVIQP AVSHQA LFVQ
Sbjct: 194 RSDFGQVWSFAAAAAAAAAPEMVIQPTAVSHQASLFVQ 223

[Close]
BLAST of Lag0018787 vs. ExPASy TrEMBL
Match: A0A6J1FD69 (transcription factor TCP21-like OS=Cucurbita moschata OX=3662 GN=LOC111444685 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.9e-56
Identity = 128/158 (81.01%), Postives = 133/158 (84.18%), Query Frame = 0 

Query: 192 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSL 251
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGG  AA+      SL
Sbjct: 61  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAAAS------SL 120

Query: 252 DHKPLLAPAPFILGKRVRTNDDGGSKDD--DGGGAGVGISVGPSVGSIMGPAAAGGYWVI 311
           DHKPLLAPAPFILGKRVRT+DDG +KDD   GGG G G+SVG +V S MG AAAGGYW I
Sbjct: 121 DHKPLLAPAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMGTAAAGGYWAI 180

Query: 312 PARPDFGQVWSF--AAAAAPEMVIQPAAVSHQALLFVQ 346
           P RPDFGQVWSF  AAAAAPEMVIQP AVSH A LFVQ
Sbjct: 181 PTRPDFGQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQ 212

[Close]
BLAST of Lag0018787 vs. TAIR 10
Match: AT5G17020.1 (exportin 1A )

HSP 1 Score: 172.6 bits (436), Expect = 8.2e-43
Identity = 89/103 (86.41%), Postives = 95/103 (92.23%), Query Frame = 0 

Query: 349 FKVCLDYWNSLVLELFEAHHNMDNLAVSANMMGLQVPLISGVVDGLGSQLMQRRQLYSGP 408
           FKVCLDYWNSLVLELF+AHHN DN AVSA++MGLQ P + G+VDGLGSQ+MQRRQLYS P
Sbjct: 357 FKVCLDYWNSLVLELFDAHHNSDNPAVSASLMGLQ-PFLPGMVDGLGSQVMQRRQLYSHP 416

Query: 409 MSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYK 452
           MSKLR LMI RMAKPEEVLIVEDENGNIVRETMKDNDVLVQYK
Sbjct: 417 MSKLRGLMINRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYK 458

[Close]
BLAST of Lag0018787 vs. TAIR 10
Match: AT5G17020.2 (exportin 1A )

HSP 1 Score: 172.6 bits (436), Expect = 8.2e-43
Identity = 89/103 (86.41%), Postives = 95/103 (92.23%), Query Frame = 0 

Query: 349 FKVCLDYWNSLVLELFEAHHNMDNLAVSANMMGLQVPLISGVVDGLGSQLMQRRQLYSGP 408
           FKVCLDYWNSLVLELF+AHHN DN AVSA++MGLQ P + G+VDGLGSQ+MQRRQLYS P
Sbjct: 342 FKVCLDYWNSLVLELFDAHHNSDNPAVSASLMGLQ-PFLPGMVDGLGSQVMQRRQLYSHP 401

Query: 409 MSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYK 452
           MSKLR LMI RMAKPEEVLIVEDENGNIVRETMKDNDVLVQYK
Sbjct: 402 MSKLRGLMINRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYK 443

[Close]
BLAST of Lag0018787 vs. TAIR 10
Match: AT5G08330.1 (TCP family transcription factor )

HSP 1 Score: 144.1 bits (362), Expect = 3.1e-34
Identity = 87/156 (55.77%), Postives = 100/156 (64.10%), Query Frame = 0 

Query: 192 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSL 251
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFST S S                 
Sbjct: 59  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLS----------------- 118

Query: 252 DHKPLLAPAPFILGKRVRTNDDGGSKDDDGGGAGVGISVGPSVG-SIMGPAAAGGYWVIP 311
                   +PF LGKRV   ++G    + GGG G G++VG ++G S+MG   +GG+W +P
Sbjct: 119 ------TSSPFTLGKRVVRAEEG----ESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVP 178

Query: 312 ARPDFGQVWSFAAAAAPEMVIQPAAVSHQALLFVQH 347
           ARPDFGQVWSFA  A PEMV   A     A LFV+H
Sbjct: 179 ARPDFGQVWSFATGAPPEMVF--AQQQQPATLFVRH 185

[Close]
BLAST of Lag0018787 vs. TAIR 10
Match: AT5G23280.1 (TCP family transcription factor )

HSP 1 Score: 141.0 bits (354), Expect = 2.6e-33
Identity = 88/156 (56.41%), Postives = 101/156 (64.74%), Query Frame = 0 

Query: 192 TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSL 251
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFST S S+RG       +++S SL
Sbjct: 67  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRG-------ATNSTSL 126

Query: 252 DHKP---LLAPAPFILGKRVRTNDDGGSKDDDGGGAGVGISVGPSVGSIMGPAAAGGYWV 311
           DHKP   L   +PFILGKRVR ++D  +  +         SVG        PA   G+W 
Sbjct: 127 DHKPTSLLGGTSPFILGKRVRADEDSNNSHNHS-------SVGKDETFTTTPA---GFWA 186

Query: 312 IPARPDFGQVWSFAAAAAPEMVIQPAAVSHQALLFV 345
           +PARPDFGQVWSF  A AP+ +       HQ  LFV
Sbjct: 187 VPARPDFGQVWSF--AGAPQEMFLQQQHHHQQPLFV 203

[Close]
BLAST of Lag0018787 vs. TAIR 10
Match: AT3G03110.1 (exportin 1B )

HSP 1 Score: 139.0 bits (349), Expect = 1.0e-32
Identity = 70/103 (67.96%), Postives = 84/103 (81.55%), Query Frame = 0 

Query: 349 FKVCLDYWNSLVLELFEAHHNMDNLAVSANMMGLQVPLISGVVDGLGSQLMQRRQLYSGP 408
           FKVCLDYWNSLVLELF   H+  + A++ ++ GLQ+  +   VDG+ S++ +R++LYS P
Sbjct: 357 FKVCLDYWNSLVLELFGTRHHACHPALTPSLFGLQMAFLPSTVDGVKSEVTERQKLYSDP 416

Query: 409 MSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYK 452
           MSKLR LMI R AKPEEVLIVEDENGNIVRETMKDNDVLVQYK
Sbjct: 417 MSKLRGLMISRTAKPEEVLIVEDENGNIVRETMKDNDVLVQYK 459

The following BLAST results are available for this feature:
BLAST of Lag0018787 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038876310.19.6e-6287.01transcription factor TCP21-like [Benincasa hispida][more]
XP_022141345.11.3e-6186.62transcription factor TCP21-like [Momordica charantia][more]
XP_022990893.13.8e-5881.88transcription factor TCP21-like [Cucurbita maxima][more]
XP_023520182.18.4e-5880.75transcription factor TCP21-like [Cucurbita pepo subsp. pepo][more]
XP_022923377.18.4e-5880.75transcription factor TCP21-like [Cucurbita moschata] >KAG6601984.1 Transcription... [more]
BLAST of Lag0018787 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SMV61.2e-4186.41Protein EXPORTIN 1A OS=Arabidopsis thaliana OX=3702 GN=XPO1 PE=1 SV=1[more]
Q9FTA24.4e-3355.77Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1[more]
Q9FMX23.7e-3256.41Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1[more]
F4IZR51.4e-3167.96Protein EXPORTIN 1B OS=Arabidopsis thaliana OX=3702 GN=XPO1B PE=2 SV=1[more]
Q9C7G43.5e-1467.16Transcription factor TCP22 OS=Arabidopsis thaliana OX=3702 GN=TCP22 PE=2 SV=1[more]
BLAST of Lag0018787 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CHT66.1e-6286.62transcription factor TCP21-like OS=Momordica charantia OX=3673 GN=LOC111011767 P... [more]
A0A6J1JUL91.8e-5881.88transcription factor TCP21-like OS=Cucurbita maxima OX=3661 GN=LOC111487646 PE=4... [more]
A0A6J1E5Y04.1e-5880.75transcription factor TCP21-like OS=Cucurbita moschata OX=3662 GN=LOC111431092 PE... [more]
A0A0A0KMY35.9e-5781.65TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G352090 PE=4 SV... [more]
A0A6J1FD692.9e-5681.01transcription factor TCP21-like OS=Cucurbita moschata OX=3662 GN=LOC111444685 PE... [more]
BLAST of Lag0018787 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G17020.18.2e-4386.41exportin 1A [more]
AT5G17020.28.2e-4386.41exportin 1A [more]
AT5G08330.13.1e-3455.77TCP family transcription factor [more]
AT5G23280.12.6e-3356.41TCP family transcription factor [more]
AT3G03110.11.0e-3267.96exportin 1B [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 86..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..157
NoneNo IPR availablePANTHERPTHR31072:SF165TRANSCRIPTION FACTOR TCP FAMILY-RELATEDcoord: 192..346
IPR041235Exportin-1, repeat 2PFAMPF18784CRM1_repeat_2coord: 401..452
e-value: 6.1E-22
score: 77.1
IPR017887Transcription factor TCP subgroupPFAMPF03634TCPcoord: 192..240
e-value: 1.3E-11
score: 45.3
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 322..490
e-value: 4.0E-26
score: 93.8
IPR005333Transcription factor, TCPPANTHERPTHR31072TRANSCRIPTION FACTOR TCP4-RELATEDcoord: 192..346

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0018787.1Lag0018787.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006611 protein export from nucleus
biological_process GO:0042752 regulation of circadian rhythm
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0005049 nuclear export signal receptor activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0031267 small GTPase binding