Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAAGGAGGTTAAAGCTGAAGCAAGAGTTGGGGTTGGAGTTGAAACTGTTTGGAAAGCTTTGGTTGAAGACTTGAGATTTCTCATCCCAAAGCTCATGCCCAACACTGTTCAAAACATTGAGCTCCTTCATGGAAATGGTGGCCTTGGCTCTGTCTTTCTTTTCCATCTTGTTCATGGTAACTTTCATTTCACTTTACCCTATTCACTATAATGATTCAAATATTTGATTGAAGAACCTAATTGAGAGAGTTTGAAATTAAAAGAAGAATGATTTTGCATGCAGATGAGGAGATGATGAAAACCCAGAAGGAAAGGATTGTGGAACTTGATGAAACAAAGCATGAAATTGGGATACAAGTGATGGAAGGGAATATATTAAAAAGAGGGTTTTCTTCTTTCAAGACAACATTCAAGCTTTCTTCCATGGCTGAAAAGGAAACCCTAGTGGATGTCAAGGTTGTTTATGAGACTGAAAGACCACATGATGAAGATGAAGAAGCTCACATGGAAGAAATGGCAACTAGGCCAGCTCTTTCTTTCTTTCAACTCTTGGAAAAGTTTCTTCTTCATTCATCTTCTTAA
mRNA sequence
ATGGTTAAGGAGGTTAAAGCTGAAGCAAGAGTTGGGGTTGGAGTTGAAACTGTTTGGAAAGCTTTGGTTGAAGACTTGAGATTTCTCATCCCAAAGCTCATGCCCAACACTGTTCAAAACATTGAGCTCCTTCATGGAAATGGTGGCCTTGGCTCTGTCTTTCTTTTCCATCTTGTTCATGATGAGGAGATGATGAAAACCCAGAAGGAAAGGATTGTGGAACTTGATGAAACAAAGCATGAAATTGGGATACAAGTGATGGAAGGGAATATATTAAAAAGAGGGTTTTCTTCTTTCAAGACAACATTCAAGCTTTCTTCCATGGCTGAAAAGGAAACCCTAGTGGATGTCAAGGTTGTTTATGAGACTGAAAGACCACATGATGAAGATGAAGAAGCTCACATGGAAGAAATGGCAACTAGGCCAGCTCTTTCTTTCTTTCAACTCTTGGAAAAGTTTCTTCTTCATTCATCTTCTTAA
Coding sequence (CDS)
ATGGTTAAGGAGGTTAAAGCTGAAGCAAGAGTTGGGGTTGGAGTTGAAACTGTTTGGAAAGCTTTGGTTGAAGACTTGAGATTTCTCATCCCAAAGCTCATGCCCAACACTGTTCAAAACATTGAGCTCCTTCATGGAAATGGTGGCCTTGGCTCTGTCTTTCTTTTCCATCTTGTTCATGATGAGGAGATGATGAAAACCCAGAAGGAAAGGATTGTGGAACTTGATGAAACAAAGCATGAAATTGGGATACAAGTGATGGAAGGGAATATATTAAAAAGAGGGTTTTCTTCTTTCAAGACAACATTCAAGCTTTCTTCCATGGCTGAAAAGGAAACCCTAGTGGATGTCAAGGTTGTTTATGAGACTGAAAGACCACATGATGAAGATGAAGAAGCTCACATGGAAGAAATGGCAACTAGGCCAGCTCTTTCTTTCTTTCAACTCTTGGAAAAGTTTCTTCTTCATTCATCTTCTTAA
Protein sequence
MVKEVKAEARVGVGVETVWKALVEDLRFLIPKLMPNTVQNIELLHGNGGLGSVFLFHLVHDEEMMKTQKERIVELDETKHEIGIQVMEGNILKRGFSSFKTTFKLSSMAEKETLVDVKVVYETERPHDEDEEAHMEEMATRPALSFFQLLEKFLLHSSS
Homology
BLAST of Lag0018765 vs. NCBI nr
Match:
XP_004149307.1 (phytohormone-binding protein [Cucumis sativus] >KGN56215.1 hypothetical protein Csa_010608 [Cucumis sativus])
HSP 1 Score: 249.2 bits (635), Expect = 2.4e-62
Identity = 123/158 (77.85%), Postives = 143/158 (90.51%), Query Frame = 0
Query: 1 MVKEVKAEARVGVGVETVWKALVEDLRFLIPKLMPNTVQNIELLHGNGGLGSVFLFHLVH 60
MVKEV+AEA+VGVG+ET+WKALV+DLRF++PKLMPNTV+ +EL+HG+GGLGSV LFHLVH
Sbjct: 1 MVKEVEAEAKVGVGIETLWKALVKDLRFIVPKLMPNTVEKVELIHGDGGLGSVLLFHLVH 60
Query: 61 DEEMMKTQKERIVELDETKHEIGIQVMEGNILKRGFSSFKTTFKLSSMAEKETLVDVKVV 120
DEEMMK QKE+IV+LDETKHE GI+VMEGNILKRGF SF TTF+LSS++EKETLVD KVV
Sbjct: 61 DEEMMKRQKEKIVKLDETKHEFGIEVMEGNILKRGFRSFNTTFRLSSISEKETLVDFKVV 120
Query: 121 YETERPHDEDEEAHMEEMATRPALSFFQLLEKFLLHSS 159
YETE DE E+ H+E+MAT ALSFFQLLE FLLHSS
Sbjct: 121 YETELSDDEVEQTHLEKMATSTALSFFQLLENFLLHSS 158
BLAST of Lag0018765 vs. NCBI nr
Match:
KAA0046864.1 (phytohormone-binding protein-like [Cucumis melo var. makuwa] >TYK03282.1 phytohormone-binding protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 244.2 bits (622), Expect = 7.6e-61
Identity = 121/159 (76.10%), Postives = 145/159 (91.19%), Query Frame = 0
Query: 1 MVKEVKAEARVGVGVETVWKALVEDLRFLIPKLMPNTVQNIELLHGNGGLGSVFLFHLVH 60
MVKEV+AEA++ VG+ET+WKALV+DLRF++PKLMPN+V+ +EL+HG+GGLGSV LFHLVH
Sbjct: 1 MVKEVEAEAKLRVGIETLWKALVKDLRFIVPKLMPNSVEKVELIHGDGGLGSVLLFHLVH 60
Query: 61 DEEMMKTQKERIVELDETKHEIGIQVMEGNILKRGFSSFKTTFKLSSMAEKETLVDVKVV 120
DEEMMK QKE+IV+LDETKHE+GI+VMEGNILKRGFSSF TTFKLSS++EKETLVD KVV
Sbjct: 61 DEEMMKRQKEKIVKLDETKHELGIEVMEGNILKRGFSSFNTTFKLSSISEKETLVDFKVV 120
Query: 121 YETERPHDEDEEAHMEEMATRPALSFFQLLEKFLLHSSS 160
YETE DE E++H+E+MAT +LSFFQLLE FLL SSS
Sbjct: 121 YETELGDDEVEQSHLEKMATSTSLSFFQLLENFLLDSSS 159
BLAST of Lag0018765 vs. NCBI nr
Match:
XP_038904253.1 (phytohormone-binding protein CSBP-like [Benincasa hispida])
HSP 1 Score: 243.8 bits (621), Expect = 9.9e-61
Identity = 122/159 (76.73%), Postives = 141/159 (88.68%), Query Frame = 0
Query: 1 MVKEVKAEARVGVGVETVWKALVEDLRFLIPKLMPNTVQNIELLHGNGGLGSVFLFHLVH 60
MVKEVKA+A+VGVG+ET+W ALV+DLRF+IPKLMPNTV+ ++L+HGNGGLGSV LFHLVH
Sbjct: 1 MVKEVKAQAKVGVGIETLWNALVKDLRFIIPKLMPNTVEKVDLIHGNGGLGSVLLFHLVH 60
Query: 61 DEEMMKTQKERIVELDETKHEIGIQVMEGNILKRGFSSFKTTFKLSSMAEKETLVDVKVV 120
DE MM++QKERIVE+DETKHE GI+V+EGNI KRGF SFKT FKLSSM+EKETLVD KVV
Sbjct: 61 DEMMMRSQKERIVEVDETKHEFGIEVIEGNIWKRGFCSFKTIFKLSSMSEKETLVDFKVV 120
Query: 121 YETERPHDEDEEAHMEEMATRPALSFFQLLEKFLLHSSS 160
YETE D DE+ HMEE+AT LSFFQLLEKFLL SS+
Sbjct: 121 YETELRCDGDEQTHMEEIATSTTLSFFQLLEKFLLDSSN 159
BLAST of Lag0018765 vs. NCBI nr
Match:
XP_022929437.1 (phytohormone-binding protein-like [Cucurbita moschata])
HSP 1 Score: 241.9 bits (616), Expect = 3.8e-60
Identity = 124/159 (77.99%), Postives = 142/159 (89.31%), Query Frame = 0
Query: 1 MVKEVKAEARVGVGVETVWKALVEDLRFLIPKLMPNTVQNIELLHGNGGLGSVFLFHLVH 60
MVKE A+A++GVGVET+WKALVEDLRF+IPKLMPNTV+NIELLHGNGG+GSV LFHL
Sbjct: 1 MVKEATAQAKLGVGVETLWKALVEDLRFIIPKLMPNTVENIELLHGNGGIGSVLLFHLGP 60
Query: 61 DEEMMKTQKERIVELDETKHEIGIQVMEGNILKRGFSSFKTTFKLSSMAEKETLVDVKVV 120
D ++MKTQKERIVELDETKHE G++V+EG +LKRGFSSFKTTF LSSM EKETLVD+KVV
Sbjct: 61 DVKIMKTQKERIVELDETKHEFGLEVVEGIMLKRGFSSFKTTFNLSSMGEKETLVDIKVV 120
Query: 121 YETERPHDEDEEAHMEEMATRPALSFFQLLEKFLLHSSS 160
YETER D ++E M+E AT+PALSF QLLEKFLLHSSS
Sbjct: 121 YETER--DGEDEVEMKEAATKPALSFLQLLEKFLLHSSS 157
BLAST of Lag0018765 vs. NCBI nr
Match:
XP_008452280.1 (PREDICTED: phytohormone-binding protein-like [Cucumis melo])
HSP 1 Score: 238.4 bits (607), Expect = 4.2e-59
Identity = 122/159 (76.73%), Postives = 142/159 (89.31%), Query Frame = 0
Query: 1 MVKEVKAEARVGVGVETVWKALVEDLRFLIPKLMPNTVQNIELLHGNGGLGSVFLFHLVH 60
MVKE KA+A+V VG+ET+WKALV+DLRF+IPKLMPNTV+ IEL+HGNGGLGSVFLFHL
Sbjct: 1 MVKEAKAQAKVRVGIETLWKALVKDLRFIIPKLMPNTVEKIELIHGNGGLGSVFLFHLGR 60
Query: 61 DEEMMKTQKERIVELDETKHEIGIQVMEGNILKRGFSSFKTTFKLSSMAEKETLVDVKVV 120
+++K QKERIVELDETKHE G++VMEG +LKRGFSSFKTTFKLSSM EKETLVDVKVV
Sbjct: 61 GVKIVKIQKERIVELDETKHEFGLEVMEGILLKRGFSSFKTTFKLSSMKEKETLVDVKVV 120
Query: 121 YETERPHDEDEEAHMEEMATRPALSFFQLLEKFLLHSSS 160
Y TER D+++E HMEE+AT+PALSF QLLEKFL+ SSS
Sbjct: 121 YGTER--DDEDEVHMEEVATKPALSFLQLLEKFLIDSSS 157
BLAST of Lag0018765 vs. ExPASy Swiss-Prot
Match:
A0A1S3THR8 (Phytohormone-binding protein CSBP OS=Vigna radiata var. radiata OX=3916 GN=CSBP PE=1 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 3.1e-25
Identity = 61/160 (38.12%), Postives = 102/160 (63.75%), Query Frame = 0
Query: 1 MVKEVKAEARVGVGVETVWKALVEDLRFLIPKLMPNTVQNIELLHGNGGLGSVFLFHLVH 60
MVKE + + V +E +W L +D ++PK++P+ V++++L+ G+GG+G++ +F+ +
Sbjct: 1 MVKEFNTQTELSVRLEALWAVLSKDFITVVPKVLPHIVKDVQLIEGDGGVGTILIFNFL- 60
Query: 61 DEEMMKTQKERIVELDETKHEIGIQVMEGNILKRGFSSFKTTFKLSSMAEKETLVDVKVV 120
E Q+E I E DE+ HEIG+QV+EG L +G S +KTTFKLS + E +TLV+VK+
Sbjct: 61 PEVSPSYQREEITEFDESSHEIGLQVIEGGYLSQGLSYYKTTFKLSEIEEDKTLVNVKIS 120
Query: 121 YETERPHDED-EEAHMEEMATRPALSFFQLLEKFLLHSSS 160
Y+ HD D EE ++ L + + LE++L + S+
Sbjct: 121 YD----HDSDIEEKVTPTKTSQSTLMYLRRLERYLSNGSA 155
BLAST of Lag0018765 vs. ExPASy Swiss-Prot
Match:
G7J032 (Phytohormone-binding protein OS=Medicago truncatula OX=3880 GN=MTR_3g055120 PE=1 SV=1)
HSP 1 Score: 112.1 bits (279), Expect = 5.9e-24
Identity = 57/158 (36.08%), Postives = 99/158 (62.66%), Query Frame = 0
Query: 1 MVKEVKAEARVGVGVETVWKALVEDLRFLIPKLMPNTVQNIELLHGNGGLGSVFLFHLVH 60
M+KE + + VG+E +W A +D+ ++PK++PN V++++++ G+GG+G+ +F+ +
Sbjct: 1 MIKEFNTQTTLNVGLEALWAAQSKDITLVVPKVLPNIVKDVQVIEGDGGVGTKLIFNFLP 60
Query: 61 DEEMMKTQKERIVELDETKHEIGIQVMEGNILKRGFSSFKTTFKLSSMAEKETLVDVKVV 120
+ Q+E I E DE H IG+QV+EG L +G S +KTTF+ S+++E +TLV+VK+
Sbjct: 61 GIAPVNYQREVITEYDELSHTIGLQVVEGGYLNQGLSYYKTTFQFSAISENKTLVNVKIS 120
Query: 121 YETERPHDEDEEAHMEEMATRPALSFFQLLEKFLLHSS 159
Y+ E + EE + L + LEKFLL+ +
Sbjct: 121 YDHE--SELIEEKVKPTKTSESTLFYLGQLEKFLLNGA 156
BLAST of Lag0018765 vs. ExPASy Swiss-Prot
Match:
P19418 (Pathogenesis-related protein B OS=Petroselinum crispum OX=4043 GN=PCPR1-3 PE=2 SV=1)
HSP 1 Score: 59.7 bits (143), Expect = 3.5e-08
Identity = 41/154 (26.62%), Postives = 77/154 (50.00%), Query Frame = 0
Query: 2 VKEVKAEARVGVGVETVWKALVEDLRFLIPKLMPNTVQNIELLHGNGGLGSVFLFHLVHD 61
V++ + EA V E ++K L D+ L+P+++P +++ E L G+GG+G+V L HL D
Sbjct: 3 VQKSEVEATSSVSAEKLFKGLCLDIDTLLPRVLPGAIKSSETLEGDGGVGTVKLVHL-GD 62
Query: 62 EEMMKTQKERIVELDETKHEIGIQVMEGNILKRGFSSFKTTFKLSSMAEKETLVDVKVVY 121
KT K+++ +D+ +++G+IL S F A+ V +++
Sbjct: 63 ASPFKTMKQKVDAIDKATFTYSYSIIDGDILLGFIESINNHFTAVPNADGGCTVKSTIIF 122
Query: 122 ETERPHDEDEEAHMEEMATRPALSFFQLLEKFLL 156
T+ EE + A L+ F+ +E +L+
Sbjct: 123 NTKGDAVVPEE--NIKFANDQNLTIFKAVEAYLI 153
BLAST of Lag0018765 vs. ExPASy Swiss-Prot
Match:
P19417 (Pathogenesis-related protein A OS=Petroselinum crispum OX=4043 GN=PCPR1-1 PE=2 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07
Identity = 40/154 (25.97%), Postives = 76/154 (49.35%), Query Frame = 0
Query: 2 VKEVKAEARVGVGVETVWKALVEDLRFLIPKLMPNTVQNIELLHGNGGLGSVFLFHLVHD 61
V++ + E V E ++K L D+ L+P+++P +++ E L G+GG+G+V L HL D
Sbjct: 3 VQKSEVETTSSVSAEKLFKGLCLDIDTLLPQVLPGAIKSSETLEGDGGVGTVKLVHL-GD 62
Query: 62 EEMMKTQKERIVELDETKHEIGIQVMEGNILKRGFSSFKTTFKLSSMAEKETLVDVKVVY 121
KT K+++ +D+ +++G+IL S F A+ V +++
Sbjct: 63 ASPFKTMKQKVDAIDKATFTYSYSIIDGDILLGFIESINNHFTAVPNADGGCTVKSTIIF 122
Query: 122 ETERPHDEDEEAHMEEMATRPALSFFQLLEKFLL 156
T+ EE + A L+ F+ +E +L+
Sbjct: 123 NTKGDAVVPEE--NIKFANDQNLTIFKAVEAYLI 153
BLAST of Lag0018765 vs. ExPASy Swiss-Prot
Match:
P38950 (Major pollen allergen Car b 1 isoform 2 OS=Carpinus betulus OX=12990 PE=1 SV=2)
HSP 1 Score: 50.8 bits (120), Expect = 1.6e-05
Identity = 40/152 (26.32%), Postives = 70/152 (46.05%), Query Frame = 0
Query: 6 KAEARVGVGVETVWKALVEDLRFLIPKLMPNTVQNIELLHGNGGLGSVFLFHLVHDEEMM 65
+AE + ++KA + D LIPK+ P V ++E + GNGG G++ + +
Sbjct: 7 EAETTSVIPAARLFKAFILDGNKLIPKVSPQAVSSVENVEGNGGPGTIKKI-TFSEGSPV 66
Query: 66 KTQKERIVELDETKHEIGIQVMEGNILKRGFSSFKTTFKLSSMAEKETLVDVKVVYETER 125
K KER+ E+D T + V+EG++L K+ + ++V + + +
Sbjct: 67 KYVKERVEEIDHTNFKYNYTVIEGDVLGDKLEKVSHELKIVAAPGGGSIVKISSKFHAKG 126
Query: 126 PHDEDEEAHMEEM--ATRPALSFFQLLEKFLL 156
H E + EEM A A + +E +LL
Sbjct: 127 YH----EVNAEEMKGAKEMAEKLLRAVESYLL 153
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_004149307.1 | 2.4e-62 | 77.85 | phytohormone-binding protein [Cucumis sativus] >KGN56215.1 hypothetical protein ... | [more] |
KAA0046864.1 | 7.6e-61 | 76.10 | phytohormone-binding protein-like [Cucumis melo var. makuwa] >TYK03282.1 phytoho... | [more] |
XP_038904253.1 | 9.9e-61 | 76.73 | phytohormone-binding protein CSBP-like [Benincasa hispida] | [more] |
XP_022929437.1 | 3.8e-60 | 77.99 | phytohormone-binding protein-like [Cucurbita moschata] | [more] |
XP_008452280.1 | 4.2e-59 | 76.73 | PREDICTED: phytohormone-binding protein-like [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3THR8 | 3.1e-25 | 38.13 | Phytohormone-binding protein CSBP OS=Vigna radiata var. radiata OX=3916 GN=CSBP ... | [more] |
G7J032 | 5.9e-24 | 36.08 | Phytohormone-binding protein OS=Medicago truncatula OX=3880 GN=MTR_3g055120 PE=1... | [more] |
P19418 | 3.5e-08 | 26.62 | Pathogenesis-related protein B OS=Petroselinum crispum OX=4043 GN=PCPR1-3 PE=2 S... | [more] |
P19417 | 1.3e-07 | 25.97 | Pathogenesis-related protein A OS=Petroselinum crispum OX=4043 GN=PCPR1-1 PE=2 S... | [more] |
P38950 | 1.6e-05 | 26.32 | Major pollen allergen Car b 1 isoform 2 OS=Carpinus betulus OX=12990 PE=1 SV=2 | [more] |