Lag0018762 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0018762
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionMonodehydroascorbate reductase
Locationchr5: 34008821 .. 34010244 (+)
RNA-Seq ExpressionLag0018762
SyntenyLag0018762
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGACGTCGTCGGAAACAACCGTATTCCTAATCTGAAAGACGGTTTCCACCACCGTGACCTGCGGACCAAGATCATCCAATTTCTAACCGGCGTTGGCAAGTTCGCCGTCGACTCCACCTTCTTCAGCTCTCTCAAGCCCGTCGCCGGTTGGTTTTCCCCTCTCTTCCTCACGAACATACATCCGTGGAGTATTTACGAAGCTTTGGTGATTTCTATTTTTTATTTACATCGAAAACACTATAAGTGTTTACGAACCCTAATTCGTTCTGGTTAAGATCCAGTATCGTGTTCAATAGCTCTAATATTTTGTATGGATCGTATTCTTTTTTCTTTCCCTAAATATTTATCTGAAATATCGGATTCCTTCCCTCCCTGCTGCCCCGAATGATGGAAAATCTGTGTATCTTGGGAGTATGTTTCTCTTGTATTCAATTAGGAATGTGCGTGGAAGAAAGTTGAAGTTTGTTTATTGAATTAGTATGCTTTGAGTATCATAGTTTTTTATGAAGCAAGTTCCAAATAGTTGGATTTTGCTCGGCTTGAATGTTAAATTTTCCTCCAGCTGCTCCGAAAAGAGTACCAAATTTTAAATTCCCCTTCGTTTTGATTCTGTTTTTCCTTTGTATGGCCATCCAAATATGGAAGGTTTTTATTTATTTTTGAAGTTTTAGATTACATTGGATTCTGATATGCAATGGAAATGGAGAAAAGTATGAGATCGCCCGATAGCTTATTGTGCCAGTTTTAGATTGGTTTAATAAGATTTTGGTCTCCGCTTCAGTATTTTTTTTTTCCCTTTTGTTTCCTTCTTAAACCAACATGTTGGTATGATATTGGTTTTGGTGAAAAACTGACCTGAATTGATCTGGGTACACCCCTACTAATAATTTTCTATCTTTTTAGTTGGTTTTATCTAAAAAAAAGACAGTTTACTCATTTCAAATGAAGAAAATGAATTGTGTTTACATCTGCTTGCCTTATGACTATTCTGTACATTTCTTTCTTGGCTGAAATGATTAGTCTCCTGGTTGTTTGTGGACGAGCTCTGATGTTCTCTGTTGACTTCTGCTTATAGTATTCGACTTTTAGTTTCTCATCTTCAGTTTCTTCTTATGACTGAGTGATGTAGATAAGAATCAGGTGCATAAGATTGGGCAGGAAGGATTAAAGAATACACCCCATTCATCCTCTTTAACTGAAAAGAAACCAGAAGAGCTTAAACTAGTGATGGATAAGATGCAGGCAGAGATGGAGGAAGCGGAGGAACACAAGAACAAAATGAAGCAACACCATTGCACATCTGCAAAGATTGTTGATGTCTCTGAACCTCTGAAGAAGTTTCCGGGTGAAGGCGCTAAAGGGCCGGCCAACGTAATGCAAAATGACAAGAAAAGGATCTTCATCCGTTCCCGACTGTAG

mRNA sequence

ATGGCTGACGTCGTCGGAAACAACCGTATTCCTAATCTGAAAGACGGTTTCCACCACCGTGACCTGCGGACCAAGATCATCCAATTTCTAACCGGCGTTGGCAAGTTCGCCGTCGACTCCACCTTCTTCAGCTCTCTCAAGCCCGTCGCCGATAAGAATCAGGTGCATAAGATTGGGCAGGAAGGATTAAAGAATACACCCCATTCATCCTCTTTAACTGAAAAGAAACCAGAAGAGCTTAAACTAGTGATGGATAAGATGCAGGCAGAGATGGAGGAAGCGGAGGAACACAAGAACAAAATGAAGCAACACCATTGCACATCTGCAAAGATTGTTGATGTCTCTGAACCTCTGAAGAAGTTTCCGGGTGAAGGCGCTAAAGGGCCGGCCAACGTAATGCAAAATGACAAGAAAAGGATCTTCATCCGTTCCCGACTGTAG

Coding sequence (CDS)

ATGGCTGACGTCGTCGGAAACAACCGTATTCCTAATCTGAAAGACGGTTTCCACCACCGTGACCTGCGGACCAAGATCATCCAATTTCTAACCGGCGTTGGCAAGTTCGCCGTCGACTCCACCTTCTTCAGCTCTCTCAAGCCCGTCGCCGATAAGAATCAGGTGCATAAGATTGGGCAGGAAGGATTAAAGAATACACCCCATTCATCCTCTTTAACTGAAAAGAAACCAGAAGAGCTTAAACTAGTGATGGATAAGATGCAGGCAGAGATGGAGGAAGCGGAGGAACACAAGAACAAAATGAAGCAACACCATTGCACATCTGCAAAGATTGTTGATGTCTCTGAACCTCTGAAGAAGTTTCCGGGTGAAGGCGCTAAAGGGCCGGCCAACGTAATGCAAAATGACAAGAAAAGGATCTTCATCCGTTCCCGACTGTAG

Protein sequence

MADVVGNNRIPNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTFFSSLKPVADKNQVHKIGQEGLKNTPHSSSLTEKKPEELKLVMDKMQAEMEEAEEHKNKMKQHHCTSAKIVDVSEPLKKFPGEGAKGPANVMQNDKKRIFIRSRL
Homology
BLAST of Lag0018762 vs. NCBI nr
Match: XP_038905013.1 (uncharacterized protein LOC120091185 [Benincasa hispida])

HSP 1 Score: 235.0 bits (598), Expect = 4.2e-58
Identity = 121/146 (82.88%), Postives = 129/146 (88.36%), Query Frame = 0

Query: 1   MADVVGNNRIPNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTFFSSLKPVADKNQVHKIGQ 60
           M DVVGNNRI NL+DGFHHRDLRTKIIQFLTGVGKFAVDSTFFSSLK V+ KNQ HK+G 
Sbjct: 41  MDDVVGNNRIRNLQDGFHHRDLRTKIIQFLTGVGKFAVDSTFFSSLKAVSGKNQAHKVGG 100

Query: 61  EGLKNTPHSSSLTEKKPEELKLVMDKMQAEMEEAEEHKNKMKQHHCTSAKIVDVSEPLKK 120
            GLK+TPHSSSL EKKPEELKLV+DKMQAEME+ E  KNKMKQHHCTSA+IVD SEPLKK
Sbjct: 101 GGLKDTPHSSSLNEKKPEELKLVLDKMQAEMEKTEADKNKMKQHHCTSAEIVDDSEPLKK 160

Query: 121 FPGEGAKGPANVMQNDKKRIFIRSRL 147
            PGEG KG AN +QN KKRIFIRSRL
Sbjct: 161 LPGEGVKGSANEIQN-KKRIFIRSRL 185

BLAST of Lag0018762 vs. NCBI nr
Match: KAG6577390.1 (hypothetical protein SDJN03_24964, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015467.1 hypothetical protein SDJN02_23103, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 219.2 bits (557), Expect = 2.4e-53
Identity = 116/146 (79.45%), Postives = 122/146 (83.56%), Query Frame = 0

Query: 1   MADVVGNNRIPNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTFFSSLKPVADKNQVHKIGQ 60
           M DV GNNRI NLKDGFHHRDLRTKII FL GVGKFAVDST F+SLK V+  NQV+KI Q
Sbjct: 1   MDDVAGNNRIRNLKDGFHHRDLRTKIIHFLNGVGKFAVDSTIFTSLKAVSGNNQVNKIRQ 60

Query: 61  EGLKNTPHSSSLTEKKPEELKLVMDKMQAEMEEAEEHKNKMKQHHCTSAKIVDVSEPLKK 120
            GLK+ PHS SL EK+PEELKLVMDKM AEMEEAE +KNKMK HHCTSA IVD S PLKK
Sbjct: 61  GGLKDPPHSPSLNEKQPEELKLVMDKMAAEMEEAEANKNKMKLHHCTSANIVDGSVPLKK 120

Query: 121 FPGEGAKGPANVMQNDKKRIFIRSRL 147
            PGEG KG ANVMQN KKRIFIRSRL
Sbjct: 121 LPGEGPKGSANVMQN-KKRIFIRSRL 145

BLAST of Lag0018762 vs. NCBI nr
Match: XP_022142728.1 (uncharacterized protein LOC111012775 [Momordica charantia])

HSP 1 Score: 217.6 bits (553), Expect = 7.0e-53
Identity = 117/148 (79.05%), Postives = 123/148 (83.11%), Query Frame = 0

Query: 1   MADVVGNNRIPNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTFFSSLKPVADKNQVHK-IG 60
           MADV G+ R   LKDGFHH DLR KIIQFLTGVGKFAVDST F+SL     KN+VHK I 
Sbjct: 1   MADVAGHRRSRTLKDGFHHPDLRMKIIQFLTGVGKFAVDSTIFNSLMAATGKNKVHKIIW 60

Query: 61  QEGLKNTPHSSSLTEKKPEELKLVMD-KMQAEMEEAEEHKNKMKQHHCTSAKIVDVSEPL 120
           Q GLK+ PHSSSL +KKPEELKLVMD KMQAEMEEAEE KNKMKQHHCTSA IV  SEPL
Sbjct: 61  QGGLKDIPHSSSLNDKKPEELKLVMDKKMQAEMEEAEERKNKMKQHHCTSANIVYGSEPL 120

Query: 121 KKFPGEGAKGPANVMQNDKKRIFIRSRL 147
           KKFPGEGAKG AN +QNDKKRIFIRSRL
Sbjct: 121 KKFPGEGAKGSANTVQNDKKRIFIRSRL 148

BLAST of Lag0018762 vs. NCBI nr
Match: XP_023552444.1 (uncharacterized protein LOC111810104 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 217.2 bits (552), Expect = 9.1e-53
Identity = 116/146 (79.45%), Postives = 122/146 (83.56%), Query Frame = 0

Query: 1   MADVVGNNRIPNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTFFSSLKPVADKNQVHKIGQ 60
           M DVVGNNRI NL DGFHHRDLRTKII FL GVGKFAVDST F+SLK V+  NQV+KI Q
Sbjct: 1   MDDVVGNNRIRNLIDGFHHRDLRTKIIHFLNGVGKFAVDSTIFTSLKAVSGNNQVNKIRQ 60

Query: 61  EGLKNTPHSSSLTEKKPEELKLVMDKMQAEMEEAEEHKNKMKQHHCTSAKIVDVSEPLKK 120
            GLK+TPHS SL EK+PEELKLVMDKM AEMEEAE +KNKMK HHCTSA I D S PLKK
Sbjct: 61  GGLKDTPHSPSLNEKQPEELKLVMDKMAAEMEEAEANKNKMKLHHCTSANIGDGSVPLKK 120

Query: 121 FPGEGAKGPANVMQNDKKRIFIRSRL 147
            PGEG KG ANVMQN KKRIFIRSRL
Sbjct: 121 LPGEGPKGSANVMQN-KKRIFIRSRL 145

BLAST of Lag0018762 vs. NCBI nr
Match: XP_008452286.1 (PREDICTED: uncharacterized protein LOC103493357 [Cucumis melo])

HSP 1 Score: 207.2 bits (526), Expect = 9.5e-50
Identity = 115/146 (78.77%), Postives = 124/146 (84.93%), Query Frame = 0

Query: 4   VVGNNRIPNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTFFSSLKPVADKNQVHKIGQEGL 63
           V+ NNRI NLKDG  HRDLR+KI QFLTGVGKFAVDST FSSLK V+ KNQVHKI Q GL
Sbjct: 42  VLPNNRIRNLKDGSQHRDLRSKIFQFLTGVGKFAVDSTIFSSLKAVSGKNQVHKIRQGGL 101

Query: 64  KNTPHSSSLTEKKPEELKLVMDKMQAEMEEAEEHKNKMK--QHHCTSAKIV-DVSEPLKK 123
           K+TPHSSSL E+KPEE+KLVMDKMQAEMEE E +KNKMK  QHHCTSA+IV D SEPLKK
Sbjct: 102 KDTPHSSSLNERKPEEVKLVMDKMQAEMEEKEGNKNKMKQRQHHCTSAEIVDDDSEPLKK 161

Query: 124 FPGEGAKGPANVMQNDKKRIFIRSRL 147
            PGE  KG ANV+QN KKRIFIRSRL
Sbjct: 162 KPGESDKGSANVIQN-KKRIFIRSRL 186

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038905013.14.2e-5882.88uncharacterized protein LOC120091185 [Benincasa hispida][more]
KAG6577390.12.4e-5379.45hypothetical protein SDJN03_24964, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022142728.17.0e-5379.05uncharacterized protein LOC111012775 [Momordica charantia][more]
XP_023552444.19.1e-5379.45uncharacterized protein LOC111810104 [Cucurbita pepo subsp. pepo][more]
XP_008452286.19.5e-5078.77PREDICTED: uncharacterized protein LOC103493357 [Cucumis melo][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0018762.1Lag0018762.1mRNA