Lag0018722 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0018722
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRNase H domain-containing protein
Locationchr5: 33255273 .. 33259204 (+)
RNA-Seq ExpressionLag0018722
SyntenyLag0018722
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTGTTAAATTCCAACAGCTCTCAAGAAGAATTAAGATGCATTTGGGTGAGCAGAGAAGAATCTCAAAGTAGTACCTGGAAGCGGCATCGTCAGAGAGTCTCGAGAATCATGTTTTGTGGACCCCCTCCCCCGTCGAACTACCTAAAGTTGAATGTTGATGCTTCATGGAATGAAGAGCTGAAGCAGGGAGGTGTGGGTTGGATCTTTCGTGATTCTCGTGGGTCTCCAGTGGATGTTGGATTTGCCAAAATCAGAAGAAATTGGACAATTGAAGCTGATGCTACGAATGTGGTGAAGGTGCTGAAATACGACGGTGAAATTGTTTCGGATTTGAAGGTGATTTTGAGTGACATCGAAGATTTAGCTGCTAAGGCTAGTGTGGTAGGCTTTCTCTAAATGCCCACGAGCATGCAACAAAATCATGCATTCCCTCGCGCGTTTGGCTGTTGGTTTTCGACCGATTTTCTCCCCATCATCCACTGTCGACGCTTGTCTTTTTGTGTTCTTCCCCTCTTCCACGCTGGAAGAGATATTTTTTTTGTAAGGGGGATGACATTTCCGTTTGGTTGTCCTCTTTAACTTCAGAGGACTTAGTGGTACCAAACTTTCTTTGCTTTTAATGATATTGTTTGTTTATAGCGATCTTCAAATACATGTATCGATTATTTTAGGACACATGTTTGGGATAAAAAGAATTTAAAGAATTTAAAACGAGACAGAGGAGAATAAAACACATGGTTGGGTGGGTGGAAAAATCCATACCATATGTTGATGGTCAAATTTCGCTTAGGAATTTGCCCTTCGCTCCACGTGACAATCGACAGTGAATTTGTAAACGAGCGGGAGAAACGTGACCTGCAAGACGAGAAAACGTTGCACACCGGTGTGGTGTAGACCACACACACTCCGATGCTTAAGTTAGCTTTCGCCGGAAACACGTAGAGTATATTTACGGATTGATGTTTGCATACCTGAATGCGTGTGTGGTCTCCATTTTTATAGACTCCCCTTAGGGTTTTCATTGTTGTCGAGCTCCAGGTGGTCACCGGGCCTTTGGTCCTGGTCAGCCTTGGTAATGGGCCGAGACCGACCTCATCCTCCTAGGGTTTTTAAGAATTCGAAGGTGTTTCGGGACGAACCAGGTGAAACCGGGGCAGTCAGGGACATCAGAGACCGAAGGGAGGTGGCCAAGCTCGACCCGCGCCAGCAGGCCAAAGGGTCGGCCTCGGCCTTATGCCGAGGTCGACCATTATGCTCGGCCTCGGCCTAGGCCGAGGCCGACCATATTGGCTCGACCCTTTGGTCTGGTCTTCCTCTGGGTCGGCTTTCTGGTCCCACCTCTGTCCAATTGTCCTCGTCAGCTCCTTGTGCGTCAATGGGTCTAAAATTACCTATAACATTAAGTCCCCACTGTTGAATTGGGATTCAGGTGTGACTTAATGCTATAGGTTGAGCTCTTTAAGCCCGATTTAAGAGTACCACTCCTGTCTCGTGTTGACTTATGTATGACTTCTTTGTTATCCTACAAGATAGGACAAACTAGACAAAATAGAAACTTCCTGAATAGGGGTTAGGTGAAATGGAAATGAGAAAAGTGAGAGGTTACAAAAGTGGCTGGAGGGCCTCTCTGGTCGACCCTCACAATCCAGCATGCATTTTCCCATTTTAGCTTGTCCATAATTAAAAATAGGAAAAACAGAAGACCTCAATCTTGCATTGAAAAATTAATTTCTGCAAAAGAAGAATGAAGGATGGGGCTATGGTCGGCCTCGGCCTCAAGCCCCTGTTAGCTTAATACTTAGCCCATTGCATTCATATGTCAATCCTTATTGGACAATAATGGGAGAATAAGCTAAAATATGTACTCATTATCCCATGTTACTTGCTTTCTACTTAATATATTCTGTACTTTCCTTTTAATCGATGAGAAATAAGGCTCTTCATCTCCTTACAACTTCTTCGTCATGCCTCACGTAATTTCAGAATTACATGAAAATCTCCACCAAAATAGTAGAAACCATATCCATGAAAAAGTTTCATCATAATCATAATGTATGAAATGATCCTATCTTGGAACAATAAGAAAAAATGGTCAAAACTATGCAAAAAATAGTCACAGTTATGACATGGAATGGGATCAAAACAATCACCATGATGATTATAGCAAGGGAATGGAATGGCCTTGACCTATCCCTATTCCCAGCCCCCACTCAACATGTGCATTTATTACTTCAGGAGTTGCATTTTTTGAGTAGGATGGACTAATTTCATACCTGACCTTTTGAAGGTGGATGGTCGGCCTCGGCCTTGGCATGAGGCCGATCCATGTTTTTACATTGTCTGCTCGTTCTCTTCATGGTTGGACTCATGTGTAGATTCGCTCCATGGTCGAACATCTCCTGCTGCTTTGAATGCTTTGGTTGTGCTAAACAGTGAAGTGACTGAGAAATCGAACCAGTCACGTTGCTTTGAATGCGTGCCTGAGGGTTGACTTTGGAGTTGGGATGCTCGGCCTCGGCCTTGGCATGAGGCCGAACATTTCTTTTGCTTTGCTTGCTAATTCGCTCTGTTGTATCCATCTCGAGGGTGCGTACACTCAGTCAGGGAAAACTTGGGGAGGCCGAGGATATTCCCGAGCCTCTCTTCAAGTGTTGTGTTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAACTTGGGGAGGCTAAGGAAATACCCGAGCCTCTCTTCAAGTATTGTATTCATCCCGAGAGTGCATACACTCAGTCGGGGAAAACTTGGGGAGGTCGAGGAAATTTCCGAGCCTCTCTTCAAGTGTTGTGTTCATCCCAGGGGTGCGTACACTCTTCTGGGAAAAACTTGGGGAGGCTGAGGAAATTCTCGAGCCTCTCTTATAGCGTTGTATTCATCCTAGGGGTGCGTACACTCTTCTGGGGAAAACTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGTGATGTGTTCATCCCAGAGGTGCGTACACTCTTATGGGGAAAACTTGGGGAGGCCGAGGAAATTCTCGAGCCTCTCTTCAAGTGATGTGTTCATCCCAAGGGTGCGTACACTCTTCTTGGGAAAACTTGAGGAGGCTAAGGAAATACCCGAGCCTCTCTTCAAGTATTGTATTCATCCCGAGGGTGCGTACATTCAGTCAGGAAAAACTTGGGGAGGCCGAGGAAATTCCCAAGCCTCTCTTCAAGTACTGTGTTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAACTTGGGGAGGTTGAGGGCATGTGTCAACCTCTCTGCAAGAATTTAGTCTCTTTCTAATGGAAAGTGCGGAAGTTTGGCCTCTGCAAGAATTATTCTCGTCTGGCCACATGCGGCACATCCTATGGAAAAATGTTTTGCACAAACACAGTATAAAGAACTTTATTAAATTTGCTAGTGTCGGCATTGTACCATGGGGAAAAGCTATGGACATGTGTCATAAAAGATGAAAATAAATAATCTTACAAATAGCTCCACCGCTATTCATAACGCAATCCTAACTTTAATAAATAAGAAAGGAAAGTCAAAATCATCGCAACATGACCATGATTATGATGGACTCGGTCTGTCCTTATTCCCAACCCCCCACTCAAAATATGTATTCAATATCTTGGACATACATTTTTTGAGTAAGGAAAAACTGACTTCGTACTTGGGCCTTTGAGCGTGGAGCTCGGCCTTGGCCTCTGGATGGTCGGCCTCGGCCTTGGCATGAGGCCGACCAGCTCTTCTGCGTTGTTTGCTTTCTTGTTTTCCATCCCAAGGGTGCCTGCAGTAAGTTGGGGACTTGGGGAGGTTGAGGGCATGCGTCAACCTCTCTTCAAGTGTTGTGTTCATCCTAGGTGTGCGTACACTCTTCTGGGGAAACTTGGGGAGACCTAG

mRNA sequence

ATGAAAGTGTTAAATTCCAACAGCTCTCAAGAAGAATTAAGATGCATTTGGGTGAGCAGAGAAGAATCTCAAAGTAGTACCTGGAAGCGGCATCGTCAGAGAGTCTCGAGAATCATGTTTTGTGGACCCCCTCCCCCGTCGAACTACCTAAAGTTGAATGTTGATGCTTCATGGAATGAAGAGCTGAAGCAGGGAGGTGTGGGTTGGATCTTTCGTGATTCTCGTGGGTCTCCAGTGGATGTTGGATTTGCCAAAATCAGAAGAAATTGGACAATTGAAGCTGATGCTACGAATGTGGTGAAGGTGCTGAAATACGACGGTGAAATTGTTTCGGATTTGAAGGTGATTTTGAGTGACATCGAAGATTTAGCTGCTAAGGCTAGTGTGACTCCCCTTAGGGTTTTCATTGTTGTCGAGCTCCAGGTGGTCACCGGGCCTTTGGTCCTGGTGAAACCGGGGCAGTCAGGGACATCAGAGACCGAAGGGAGGTGGCCAAGCTCGACCCGCGCCAGCAGGCCAAAGGGTCGGCCTCGGCCTTATGCCGAGGTCGACCATTATGCTCGGCCTCGGCCTAGGCCGAGGCCGACCATATTGGCTCGACCCTTTGGTCTGGTCTTCCTCTGGGTCGGCTTTCTGGTCCCACCTCTGTCCAATTGTCCTCGTCAGCTCCTTGTGGATGGTCGGCCTCGGCCTTGGCATGAGGCCGATCCATGTTTTTACATTGTCTGCTCGTTCTCTTCATGGTTGGACTCATGTGTAGATTCGCTCCATGGTCGAACATCTCCTGCTGCTTTGAATGCTTTGGTTGTGCTAAACAGTGAAGTGACTGAGAAATCGAACCAGTCACGTTGCTTTGAATGCGTGCCTGAGGGGTGCGTACACTCAGTCAGGGAAAACTTGGGGAGGCCGAGGATATTCCCGAGCCTCTCTTCAAGTGTTGTGTTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAACTTGGGGAGGCTAAGGAAATACCCGAGCCTCTCTTCAAGTATTGTATTCATCCCGAGAGTGCATACACTCAGTCGGGGAAAACTTGGGGAGGTCGAGGAAATTTCCGAGCCTCTCTTCAAGTGTTGTGTTCATCCCAGGGGGGTGCGTACACTCTTCTGGGGAAAACTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGTGATGTGTTCATCCCAGAGGTGCGTACACTCTTATGGGGAAAACTTGGGGAGGCCGAGGAAATTCTCGAGCCTCTCTTCAAGTGATGTGTTCATCCCAAGGGTGCGTACACTCTTCTTGGGAAAACTTGAGGAGGCTAAGGAAATACCCGAGCCTCTCTTCAAGTATTGTATTCATCCCGAGGGTGCGTACATTCAGTCAGGAAAAACTTGGGGAGGCCGAGGAAATTCCCAAGCCTCTCTTCAAGTACTGTGTTCATCCCAGGGCGTGGAGCTCGGCCTTGGCCTCTGGATGGTCGGCCTCGGCCTTGGCATGAGGCCGACCAGCTCTTCTGCGTTGTTTGCTTTCTTGTTTTCCATCCCAAGGGTGCCTGCAGTAAGTTGGGGACTTGGGGAGGTTGAGGGCATGCGTCAACCTCTCTTCAAGTGTTGTGTTCATCCTAGGTGTGCGTACACTCTTCTGGGGAAACTTGGGGAGACCTAG

Coding sequence (CDS)

ATGAAAGTGTTAAATTCCAACAGCTCTCAAGAAGAATTAAGATGCATTTGGGTGAGCAGAGAAGAATCTCAAAGTAGTACCTGGAAGCGGCATCGTCAGAGAGTCTCGAGAATCATGTTTTGTGGACCCCCTCCCCCGTCGAACTACCTAAAGTTGAATGTTGATGCTTCATGGAATGAAGAGCTGAAGCAGGGAGGTGTGGGTTGGATCTTTCGTGATTCTCGTGGGTCTCCAGTGGATGTTGGATTTGCCAAAATCAGAAGAAATTGGACAATTGAAGCTGATGCTACGAATGTGGTGAAGGTGCTGAAATACGACGGTGAAATTGTTTCGGATTTGAAGGTGATTTTGAGTGACATCGAAGATTTAGCTGCTAAGGCTAGTGTGACTCCCCTTAGGGTTTTCATTGTTGTCGAGCTCCAGGTGGTCACCGGGCCTTTGGTCCTGGTGAAACCGGGGCAGTCAGGGACATCAGAGACCGAAGGGAGGTGGCCAAGCTCGACCCGCGCCAGCAGGCCAAAGGGTCGGCCTCGGCCTTATGCCGAGGTCGACCATTATGCTCGGCCTCGGCCTAGGCCGAGGCCGACCATATTGGCTCGACCCTTTGGTCTGGTCTTCCTCTGGGTCGGCTTTCTGGTCCCACCTCTGTCCAATTGTCCTCGTCAGCTCCTTGTGGATGGTCGGCCTCGGCCTTGGCATGAGGCCGATCCATGTTTTTACATTGTCTGCTCGTTCTCTTCATGGTTGGACTCATGTGTAGATTCGCTCCATGGTCGAACATCTCCTGCTGCTTTGAATGCTTTGGTTGTGCTAAACAGTGAAGTGACTGAGAAATCGAACCAGTCACGTTGCTTTGAATGCGTGCCTGAGGGGTGCGTACACTCAGTCAGGGAAAACTTGGGGAGGCCGAGGATATTCCCGAGCCTCTCTTCAAGTGTTGTGTTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAACTTGGGGAGGCTAAGGAAATACCCGAGCCTCTCTTCAAGTATTGTATTCATCCCGAGAGTGCATACACTCAGTCGGGGAAAACTTGGGGAGGTCGAGGAAATTTCCGAGCCTCTCTTCAAGTGTTGTGTTCATCCCAGGGGGGTGCGTACACTCTTCTGGGGAAAACTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGTGATGTGTTCATCCCAGAGGTGCGTACACTCTTATGGGGAAAACTTGGGGAGGCCGAGGAAATTCTCGAGCCTCTCTTCAAGTGATGTGTTCATCCCAAGGGTGCGTACACTCTTCTTGGGAAAACTTGAGGAGGCTAAGGAAATACCCGAGCCTCTCTTCAAGTATTGTATTCATCCCGAGGGTGCGTACATTCAGTCAGGAAAAACTTGGGGAGGCCGAGGAAATTCCCAAGCCTCTCTTCAAGTACTGTGTTCATCCCAGGGCGTGGAGCTCGGCCTTGGCCTCTGGATGGTCGGCCTCGGCCTTGGCATGAGGCCGACCAGCTCTTCTGCGTTGTTTGCTTTCTTGTTTTCCATCCCAAGGGTGCCTGCAGTAAGTTGGGGACTTGGGGAGGTTGAGGGCATGCGTCAACCTCTCTTCAAGTGTTGTGTTCATCCTAGGTGTGCGTACACTCTTCTGGGGAAACTTGGGGAGACCTAG

Protein sequence

MKVLNSNSSQEELRCIWVSREESQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIRRNWTIEADATNVVKVLKYDGEIVSDLKVILSDIEDLAAKASVTPLRVFIVVELQVVTGPLVLVKPGQSGTSETEGRWPSSTRASRPKGRPRPYAEVDHYARPRPRPRPTILARPFGLVFLWVGFLVPPLSNCPRQLLVDGRPRPWHEADPCFYIVCSFSSWLDSCVDSLHGRTSPAALNALVVLNSEVTEKSNQSRCFECVPEGCVHSVRENLGRPRIFPSLSSSVVFIPGVRTLFWGKLGEAKEIPEPLFKYCIHPESAYTQSGKTWGGRGNFRASLQVLCSSQGGAYTLLGKTWGGRGNSRASLQVMCSSQRCVHSYGENLGRPRKFSSLSSSDVFIPRVRTLFLGKLEEAKEIPEPLFKYCIHPEGAYIQSGKTWGGRGNSQASLQVLCSSQGVELGLGLWMVGLGLGMRPTSSSALFAFLFSIPRVPAVSWGLGEVEGMRQPLFKCCVHPRCAYTLLGKLGET
Homology
[Close]
BLAST of Lag0018722 vs. NCBI nr
Match: XP_022143317.1 (uncharacterized protein LOC111013216 [Momordica charantia])

HSP 1 Score: 63.9 bits (154), Expect = 4.9e-06
Identity = 38/105 (36.19%), Postives = 58/105 (55.24%), Query Frame = 0 

Query: 3   VLNSNSSQEELRCIWVSREESQSSTW-KRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEE 62
           VL  NS+ ++  CI  +R   Q+  +  R R+ ++ +      PP+N  KLN DASW+EE
Sbjct: 65  VLFINSNIDKGTCISQTRRSQQNDGYLPRGRENLNMLGVRWSAPPTNCWKLNTDASWSEE 124

Query: 63  LKQGGVGWIFRDSRGSPVDVGFAKIRRNWTIEA-DATNVVKVLKY 106
            + GG+GWI  D RG  V  G  KIR    I A +   +++ L++
Sbjct: 125 REVGGIGWILCDCRGEIVLAGNCKIREKKEINALELMTIIRGLQF 169

[Close]
BLAST of Lag0018722 vs. NCBI nr
Match: CAA7029126.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 57.0 bits (136), Expect = 6.0e-04
Identity = 33/101 (32.67%), Postives = 54/101 (53.47%), Query Frame = 0 

Query: 17  WVSREE--SQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDS 76
           W +R E  SQS T K +    +       PPP+ +LK NVD +W+      GVGW+ RD 
Sbjct: 321 WTNRVEKNSQSGTPKTNPGTQASHREHWTPPPAGWLKCNVDGAWSHRGDHSGVGWVLRDD 380

Query: 77  RGSPVDVGFAKIRRNWT-IEADATNVVKVLKYDGEIVSDLK 115
           +G  + +G  +I +  T +EA+    ++ L++  E V+ L+
Sbjct: 381 KGKVLWMGAKRIHKTQTVVEAE----LEALRWAAEFVTSLR 417

[Close]
BLAST of Lag0018722 vs. ExPASy TrEMBL
Match: A0A1J3ELU2 (RNase H domain-containing protein OS=Noccaea caerulescens OX=107243 GN=LC_TR1531_c2_g1_i1_g.5180 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.2e-07
Identity = 42/135 (31.11%), Postives = 61/135 (45.19%), Query Frame = 0 

Query: 17  WVSREESQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRG 76
           W SR+E+Q S   ++    + +     PPPS ++K NVD +WN++    G+GW+ RDS+G
Sbjct: 66  WKSRKENQGSLEIKNPMPTNPLRESWKPPPSGWVKCNVDGTWNKDAVDNGIGWVLRDSKG 125

Query: 77  SPVDVGFAKIRR------------NWTI-------------EADATNVVKVLKYDGEIVS 127
             + +G  KI R             W I             E D+   V+ L  D E   
Sbjct: 126 DVLWIGGRKISRLSSILEVEIEALRWAILVTSNFNYDNIIFETDSKEAVEALSSD-EGWP 185

[Close]
BLAST of Lag0018722 vs. ExPASy TrEMBL
Match: A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.4e-06
Identity = 38/105 (36.19%), Postives = 58/105 (55.24%), Query Frame = 0 

Query: 3   VLNSNSSQEELRCIWVSREESQSSTW-KRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEE 62
           VL  NS+ ++  CI  +R   Q+  +  R R+ ++ +      PP+N  KLN DASW+EE
Sbjct: 65  VLFINSNIDKGTCISQTRRSQQNDGYLPRGRENLNMLGVRWSAPPTNCWKLNTDASWSEE 124

Query: 63  LKQGGVGWIFRDSRGSPVDVGFAKIRRNWTIEA-DATNVVKVLKY 106
            + GG+GWI  D RG  V  G  KIR    I A +   +++ L++
Sbjct: 125 REVGGIGWILCDCRGEIVLAGNCKIREKKEINALELMTIIRGLQF 169

[Close]
BLAST of Lag0018722 vs. ExPASy TrEMBL
Match: A0A1J3D6G7 (Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=GA_TR18843_c0_g1_i1_g.60521 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.5e-05
Identity = 25/71 (35.21%), Postives = 39/71 (54.93%), Query Frame = 0 

Query: 17   WVSREESQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRG 76
            W+ R E  S   + H  +         PPP  +LK NVD +W++E  Q G+GW+ RD+RG
Sbjct: 934  WLKRSEGVSKRLENHATK-DTTQLTWKPPPEGWLKCNVDGAWSKEQNQCGIGWVLRDNRG 993

Query: 77   SPVDVGFAKIR 88
              + +G  K++
Sbjct: 994  KIIWMGARKLK 1003

[Close]
BLAST of Lag0018722 vs. ExPASy TrEMBL
Match: A0A1J3C7A8 (Putative ribonuclease H protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR12511_c0_g1_i1_g.40014 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.8e-05
Identity = 30/85 (35.29%), Postives = 43/85 (50.59%), Query Frame = 0 

Query: 3   VLNSNSSQEELRCIWVSREESQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEEL 62
           VL +    EE    WV   E +S   K   +     +    PPP  +LK NVD +W+EE 
Sbjct: 552 VLKAREDMEE----WVKSTEEKSKKSKDSSKPNDSSINAWKPPPQGWLKCNVDGTWSEEH 611

Query: 63  KQGGVGWIFRDSRGSPVDVGFAKIR 88
            + G+GW+ RDSRG  + +G  K +
Sbjct: 612 DRSGIGWVLRDSRGKVIWMGARKTK 632

[Close]
BLAST of Lag0018722 vs. ExPASy TrEMBL
Match: A0A6D2IMK4 (RNase H domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS16361 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.9e-04
Identity = 33/101 (32.67%), Postives = 54/101 (53.47%), Query Frame = 0 

Query: 17  WVSREE--SQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDS 76
           W +R E  SQS T K +    +       PPP+ +LK NVD +W+      GVGW+ RD 
Sbjct: 321 WTNRVEKNSQSGTPKTNPGTQASHREHWTPPPAGWLKCNVDGAWSHRGDHSGVGWVLRDD 380

Query: 77  RGSPVDVGFAKIRRNWT-IEADATNVVKVLKYDGEIVSDLK 115
           +G  + +G  +I +  T +EA+    ++ L++  E V+ L+
Sbjct: 381 KGKVLWMGAKRIHKTQTVVEAE----LEALRWAAEFVTSLR 417

[Close]
BLAST of Lag0018722 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 8.9e-06
Identity = 36/137 (26.28%), Postives = 64/137 (46.72%), Query Frame = 0 

Query: 17  WVSREESQSSTWKRHRQRVSRIMFCG--PPPPSNYLKLNVDASWNEELKQGGVGWIFRDS 76
           W  R E++S   K    R S    CG   PPP  ++K N DA+WN + ++ G+GW+ R+ 
Sbjct: 397 WRIRTEAESCGTKPQVNRSS----CGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNE 456

Query: 77  RGSPVDVG------------------------FAKIRRNWTI-EADATNVVKVLKYDGEI 127
           +G    +G                         ++ + N+ I E+D+  ++++L  D EI
Sbjct: 457 KGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNND-EI 516

[Close]
BLAST of Lag0018722 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 7.5e-05
Identity = 22/58 (37.93%), Postives = 35/58 (60.34%), Query Frame = 0 

Query: 44  PPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIR-RNWTIEADATNVV 101
           PP  + LK N DAS +E     G+GWI R+S+G+ ++ G  K + R  T EA+ + ++
Sbjct: 107 PPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLI 164

The following BLAST results are available for this feature:
BLAST of Lag0018722 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022143317.14.9e-0636.19uncharacterized protein LOC111013216 [Momordica charantia][more]
CAA7029126.16.0e-0432.67unnamed protein product [Microthlaspi erraticum][more]
BLAST of Lag0018722 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0018722 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1J3ELU28.2e-0731.11RNase H domain-containing protein OS=Noccaea caerulescens OX=107243 GN=LC_TR1531... [more]
A0A6J1CQG02.4e-0636.19uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A1J3D6G74.5e-0535.21Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=GA_TR18843_c0_g1_i1... [more]
A0A1J3C7A85.8e-0535.29Putative ribonuclease H protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=... [more]
A0A6D2IMK42.9e-0432.67RNase H domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_L... [more]
BLAST of Lag0018722 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G29090.18.9e-0626.28Ribonuclease H-like superfamily protein [more]
AT5G65005.17.5e-0537.93Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..167

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0018722.1Lag0018722.1mRNA