Lag0018715 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATATAGTTGCCTTAGCTTTAGTAAATGCAAATACATCCATTGATGTATTTGTTGAGCATGTAGTGCATGAAGATGTAAACATGAGAGATGTCTATTATGAAGAAGCAGGAGTGGAGCATGAAAGTGAAAATGACCAAATATCTGATAAAGAAGATAGCGTAGAAGATATATCATTTTCTGGTAGTGAGGAGGATTTAAATGATGATCTAGAACATAAGATAGTCGAGGATTTTGAAGAGGAAGATAGGGAAGAACATAAATTTGGTTGGGAGAACATAAATTTGAAGTAAGGAGGGGTAGCAACGCATACATAGTAGACTTGAAAGGTAGATGTTGTGCTTGCAGGAAATGGGAGTTGGCTGGAATCCCATGTCAACATGCTATCAGTTCAATCTTTTACAAGTATGATATAGTTGAAAATTATGTTGATGATTGTTATTCAACATCTATCTATGAAGCATGTTATGCTCCCATGATTCATCCTATTAATGGCGAGAATTTATGGAACCATGCGAACGATGACCTAAACCCAATTCGCCCTCCACCAATGAGGAAACAACCTGGGAGGCCCAAAAAGTTAAGACGAAGAGAGCCTGATGAACCACGACCATCTACCAAGTTTAGTAGGAAGCATATTGTTCTCACATGCTCAATTTGCCATAAAGTTGGACATAACAAAAGAGGTTGTAAGGGGAAGGTTAGTAAAAAGAGTGTTTTCTTTTCTTTTTTTTTTTCAATTATTGTGTGTTGCTTGTTGGTGATCTAACTTAACTTTTAATTATGTTTTAATTTGATAGGAAACCATCTCGGTGCAAAGTAGTGGAGTACGATGTTCCCAACAATCGGTTGGTATTTTGCATTTTAAAATATTTGTGCACTTACCTACTTTTAATAATGATCTAATGTTTGTGGGTGGTACCATACCAAAGTGGACGAGTGCAAGCAACTCTGAGAAGTGGACATGAAAAAAGAGCTTGTAAGGGAAAGGTTAGACTTCTTTTTCAATTCAAATTCTTCTCATGAGTTTCAATATGATGTTTTTTCATTGCTTGAGCACAATTCAATTTAGTACTTCTTCAATATGGCAAGGAACAAATTGCAATCTTCCACCACAAGTTTCAGTTTTACCTTCAACTAATGTTGCATCGACTAACACTCGACAAGTGGACAAACTACCAATAAGAGGAAAGTTGAAGAAGAAAGTTAGTAGTGTTCCACTGCTACCAATTTGGGATAATAATAGAATTACACATCCGATTCACTCTGATCCACATGGAGCAGAGCATACATCCAAGGAATGA ATGAATATAGTTGCCTTAGCTTTAGTAAATGCAAATACATCCATTGATGTATTTGTTGAGCATGTAGTGCATGAAGATGTAAACATGAGAGATGTCTATTATGAAGAAGCAGGAGTGGAGCATGAAAGTGAAAATGACCAAATATCTGATAAAGAAGATAGCGTAGAAGATATATCATTTTCTGGTAGTGAGGAGGATTTAAATGATGATCTAGAACATAAGATAGTCGAGGATTTTGAAGAGGAAGATAGGGAAGAACATAAATTTGGTTGGGAGAACATAAATTTGAAGAAATGGGAGTTGGCTGGAATCCCATGTCAACATGCTATCAGTTCAATCTTTTACAAGTATGATATAGTTGAAAATTATGTTGATGATTGTTATTCAACATCTATCTATGAAGCATGTTATGCTCCCATGATTCATCCTATTAATGGCGAGAATTTATGGAACCATGCGAACGATGACCTAAACCCAATTCGCCCTCCACCAATGAGGAAACAACCTGGGAGGCCCAAAAAGTTAAGACGAAGAGAGCCTGATGAACCACGACCATCTACCAAGAAACCATCTCGGTGCAAAGTAGTGGAGTACGATGTTCCCAACAATCGTACTTCTTCAATATGGCAAGGAACAAATTGCAATCTTCCACCACAAGTTTCAGTTTTACCTTCAACTAATGTTGCATCGACTAACACTCGACAAGTGGACAAACTACCAATAAGAGGAAAGTTGAAGAAGAAAGTTAGTAGTGTTCCACTGCTACCAATTTGGGATAATAATAGAATTACACATCCGATTCACTCTGATCCACATGGAGCAGAGCATACATCCAAGGAATGA ATGAATATAGTTGCCTTAGCTTTAGTAAATGCAAATACATCCATTGATGTATTTGTTGAGCATGTAGTGCATGAAGATGTAAACATGAGAGATGTCTATTATGAAGAAGCAGGAGTGGAGCATGAAAGTGAAAATGACCAAATATCTGATAAAGAAGATAGCGTAGAAGATATATCATTTTCTGGTAGTGAGGAGGATTTAAATGATGATCTAGAACATAAGATAGTCGAGGATTTTGAAGAGGAAGATAGGGAAGAACATAAATTTGGTTGGGAGAACATAAATTTGAAGAAATGGGAGTTGGCTGGAATCCCATGTCAACATGCTATCAGTTCAATCTTTTACAAGTATGATATAGTTGAAAATTATGTTGATGATTGTTATTCAACATCTATCTATGAAGCATGTTATGCTCCCATGATTCATCCTATTAATGGCGAGAATTTATGGAACCATGCGAACGATGACCTAAACCCAATTCGCCCTCCACCAATGAGGAAACAACCTGGGAGGCCCAAAAAGTTAAGACGAAGAGAGCCTGATGAACCACGACCATCTACCAAGAAACCATCTCGGTGCAAAGTAGTGGAGTACGATGTTCCCAACAATCGTACTTCTTCAATATGGCAAGGAACAAATTGCAATCTTCCACCACAAGTTTCAGTTTTACCTTCAACTAATGTTGCATCGACTAACACTCGACAAGTGGACAAACTACCAATAAGAGGAAAGTTGAAGAAGAAAGTTAGTAGTGTTCCACTGCTACCAATTTGGGATAATAATAGAATTACACATCCGATTCACTCTGATCCACATGGAGCAGAGCATACATCCAAGGAATGA MNIVALALVNANTSIDVFVEHVVHEDVNMRDVYYEEAGVEHESENDQISDKEDSVEDISFSGSEEDLNDDLEHKIVEDFEEEDREEHKFGWENINLKKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDEPRPSTKKPSRCKVVEYDVPNNRTSSIWQGTNCNLPPQVSVLPSTNVASTNTRQVDKLPIRGKLKKKVSSVPLLPIWDNNRITHPIHSDPHGAEHTSKE Homology
BLAST of Lag0018715 vs. NCBI nr
Match: XP_023896782.1 (uncharacterized protein LOC112008678 [Quercus suber]) HSP 1 Score: 111.7 bits (278), Expect = 1.0e-20 Identity = 60/138 (43.48%), Postives = 79/138 (57.25%), Query Frame = 0
BLAST of Lag0018715 vs. NCBI nr
Match: XP_023875200.1 (uncharacterized protein LOC111987710 [Quercus suber]) HSP 1 Score: 107.8 bits (268), Expect = 1.5e-19 Identity = 54/121 (44.63%), Postives = 73/121 (60.33%), Query Frame = 0
BLAST of Lag0018715 vs. NCBI nr
Match: XP_023905004.1 (uncharacterized protein LOC112016740, partial [Quercus suber]) HSP 1 Score: 107.8 bits (268), Expect = 1.5e-19 Identity = 55/121 (45.45%), Postives = 73/121 (60.33%), Query Frame = 0
BLAST of Lag0018715 vs. NCBI nr
Match: XP_030936973.1 (uncharacterized protein LOC115962214 [Quercus lobata]) HSP 1 Score: 107.5 bits (267), Expect = 2.0e-19 Identity = 67/161 (41.61%), Postives = 88/161 (54.66%), Query Frame = 0
BLAST of Lag0018715 vs. NCBI nr
Match: XP_030936410.1 (uncharacterized protein LOC115961597 [Quercus lobata]) HSP 1 Score: 105.9 bits (263), Expect = 5.7e-19 Identity = 63/158 (39.87%), Postives = 84/158 (53.16%), Query Frame = 0
BLAST of Lag0018715 vs. ExPASy TrEMBL
Match: A0A2N9EMB4 (SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7888 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 8.3e-24 Identity = 60/115 (52.17%), Postives = 76/115 (66.09%), Query Frame = 0
BLAST of Lag0018715 vs. ExPASy TrEMBL
Match: A0A2N9HUS0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43291 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-23 Identity = 60/120 (50.00%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Lag0018715 vs. ExPASy TrEMBL
Match: A0A2N9FLE9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15984 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-23 Identity = 60/120 (50.00%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Lag0018715 vs. ExPASy TrEMBL
Match: A0A2N9EQ17 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4581 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 7.7e-22 Identity = 60/128 (46.88%), Postives = 79/128 (61.72%), Query Frame = 0
BLAST of Lag0018715 vs. ExPASy TrEMBL
Match: A0A2N9FFQ0 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13895 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 6.6e-21 Identity = 65/148 (43.92%), Postives = 86/148 (58.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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