Lag0018680 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAGAGGCAGTATGTTTCCAACCCCTTTTGTTACTCCTATTTTTCTATCCATAATTATATTTAAATATGCTCTCTTGTTTCATTACTTAGATTTATATTTTTAATACCTCGGTCCATCTTTTGACAGATTCAATCCTTTTACTTCTGCTGAGATGTGAATCACTGTAACATGAATTTAATGCTTTGAGACCTCACAATCAATATATTAAATTTGGCAATCTTTTGACAGCTTAGAGGCAGATACGGTGAGGCTTATGTATTTACAATGACAACATCCCCTACTCATGAGGGAGAAGTTGAGAACATGGTGAAGCGTTTGGCCCCTGGAGCTAGCAAGATTTACCACTTATCTGGAACACAAAAATTTCTTTTGAAGTTATCATCTAGGACCTTATTTGAAGTGCAGTTAAAAATATTAATGTCGACTGTTCTTAATTACTAGTTTTTTTTAAAACATATTTCTACATGAAAATGGAGGAAACATGAACCTCTATAGATGATGATGGTACATAAAAATATGACTTTTCGGATTCTGGGTGTAAAAGCATCTGAAATATGAAAGGAAGTTGACCTCTGGATCTTTATTATTTCTTGTACTTTCTTTTATAGGAAATCAAAACTTCTCATCAGATGTAAGTATCTATGAACTGCAAATCTATAATTTCTTTCAACTTTTGTTTTCTACATTGTACAATAAGCATCCATGAACTGCAAATCTACAGGTAAGTTTAGCCTTTTTGTTATCTGCAGGTTTTCTGTGAATTTGATTTGGAATTAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATTTTATTTTTATACTTTGTTTTCACGTATTATCAGGAGTTCACAGATACTTTGATCAAGGAGGAAGAATTATCTGAAAGTCAAAAGGATGCCTTTAAGGTAATGGTTTGTCAAGTGTTACAACCAAGTTGAGTTCTTACTAGTATTATTCAAATTAATCGGTCAACCACTCAAATTTCTTGTAGGTATCTTTCTGTGACGTTTTCTGATGTCGTATGTCTTTACTAATATTCTTTGTTATTTTTTTCAAGATCATTTGCCTTTATGTAAACACTCTGTTCGTAAGAAATTTATCTTACTAATAAATCTAACAGATTTTTGTATTTTTCCTAACTGCCTGCATTATTGTACTGATGTTATTGCATTACCTCGTGAGAATGATGGCTCCATTTGAACTAGTAGACTGTGGATTTGGGGACAAAATCAGGTTTTAATTTATTTGTTTTAAATGTTGATGTTCTTTTGTAAACTTCTCTAACTTCCTTTCCATTTCAAACTTTCTTATTTGAATGCAAAATATGTTTATGTAAGTTTACCAACTGAGCAGAACTAATTTGAAGTCTTTAGTCTAGGACCAAGTCTTGCTTCTTGGGTGGAAAACACAGGTACTCATGTAAATTTAAGCGTCTTAAGCAAAACAAACAAATTAATATGTTAGTTAGATGAAAAGCATGGATGTTGATGGATCTTGAGATAATTGTGTGTATGTCATCTCCTACTTTTGATACATCCTAGGCTCATTAGTTGATTTATGGATTGGCTCCCTATTAGTTCATTCTATTTGGTGAAGAATAATAATACTAGTATGTTGTTGCTTCTGTTTTGTCAATGTGATGAAATTATTTGCTTATTGAACTTTTTTCTGCAAGTTATAGGGTATATTTAAGTGTCTTTTGTTTTTTTTCTTCTTTTCAAGTGGTGAGCTAGAAAAATTGGTAATTGGCTTCTTGCTTACTGCACACCAAGTGTTTGTAGAATTTATTTGTGAATTTACTTTTACACTAATGAATATTACTGCACACCAAGTGTTCTATAATCCTCTAGATGTTGTTGGTTATTAGCTCTACTTTACTCGTACGTCTTGTAACTTTGGTTTTAGTCTAAGGATTTGATTGGAGATGTGTGTCGATTGTATTTTACTTACGTTTTTGCTTTGTATAAGGTTTGGAATTCTTGTTAAGCGAGAACTGTTGCAGATGATGAAATGGATATTCTCGAAAGGGAGCTCGAAGAGGAACTTGGCCGGAAAGAGCGTAGAAGGAGTTGTGTACTTATTTTGTTTAATAATTTTACTTTTTGTTTGTAAATTGGTTCATGGATGTGTGATTTGTTGATAGACGAAAAGTCTCATGTATTATATACACTATTATATTTTATTAATTAAATCCATGTTCGTTGAGTTAGTTGTTGTGTAAAAATACTTTCGAGATTTTATTTTGTGTATATGTTGACATTTTATTTTGTTTAGAGGTTTTTACAAAATGAAGAAATAGTATTGTTGGTTAGCAACGTGTGCAACCAACAATTTTTTTTTATTTTAATATCGCACATTTAATGCCGGACGCTTTTAATGTCGCACATCTAATGTCGGACACTTTTAATGTCACAACTTTTAATGTCGGACAATGACCGACATAAAAAACTGACTGACATTAAAAATGATTTTTAATGTCGGACAAAGAGTGGTTGACCGACATAAAAAGTGCACTTTTAATGTCGGTCAAAGCTTGTTGAATGACATTAAAAGGGCCCTTTTAATGTCGGGCAATGACCGACATTAAAAGGGTACTTTTAATGTCGGACAACTCTTTTAATGTCGGATAATGACAGACATTAAAAGCGACCAACATTAAAAGTGACCGACATTAAAACTTTTAATGTCGGTGTTTTTAATGTCGGTCAGTGACCGACATTAAAAGCCAGATTTGTTGTAGTGTGGGTAGTTTAATGTATGGAATGACATGTACACGACCTGATTTAGCCTTTGCTATGAGCACAGTGAGTAGATATATATATGAGTGATCCATGAAAACCCCATTGGGAGGCAGTAAAATGGGTGATTAGATACATAAAAGGCAGCTTAAATCATGGACTAATCTACTCAAGAGGGAGTTCTAAAGATGTGTGTTTAGTTGGTTATGCAGATGCTAACTTTGCTGCTGATTTAGATAAAAGGAGATCAACTTCTGGGTATGTATTTACTTTGTTTGGGAACACAATTAGTTGGAAATCTCAGTTACAATTTGTTACTGCTTTATCGACCACAGAATCTGAATATATCTCCTTGGCAGAATGTGTGAAGGAAGGTATTTGGCTGCAAGGGTTAATTAATGAATTGCTTGGAAATATTGATTTGTTTACTGTTTTTAGTGACAGCCAAAGTGCCCTTGCACTTTCAAAAAATCTGTTGTATCATGATCGACCAAAGCATATCGACATCCGCTACCACTACATCAGAGAGAAAGTTTTAAACAATGAAGTCAAGCTGGAGAAAATCTCTTCAGCAAATAATCCAGTAGATATGCTTACTAAATCTTTGTCAGCCTTAAGGACGCTTCACCTAATGAACCTAATGAAGGTAGGTGTGGGCTAA ATGCCAGAGGCACTTAGAGGCAGATACGGTGAGGCTTATGTATTTACAATGACAACATCCCCTACTCATGAGGGAGAAGTTGAGAACATGGAGTTCACAGATACTTTGATCAAGGAGGAAGAATTATCTGAAAGTCAAAAGGATGCCTTTAAGATTTTTGTATTTTTCCTAACTGCCTGCATTATTGTACTGATGTTATTGCATTACCTCGTGAGAATGATGGCTCCATTTGAACTAGTAGACTGTGGATTTGGGGACAAAATCAGGTTTGGAATTCTTGTTAAGCGAGAACTGTTGCAGATGATGAAATGGATATTCTCGAAAGGGAGCTCGAAGAGGAACTTGGCCGGAAAGAGCGTAGAAGGAGTTGTCTTAAATCATGGACTAATCTACTCAAGAGGGAGTTCTAAAGATGTGTGTTTAGTTGGTTATGCAGATGCTAACTTTGCTGCTGATTTAGATAAAAGGAGATCAACTTCTGGGTATGTATTTACTTTGTTTGGGAACACAATTAGTTGGAAATCTCAGTTACAATTTGTTACTGCTTTATCGACCACAGAATCTGAATATATCTCCTTGGCAGAATGTGTGAAGGAAGGTATTTGGCTGCAAGGGTTAATTAATGAATTGCTTGGAAATATTGATTTGTTTACTGTTTTTAGTGACAGCCAAAGTGCCCTTGCACTTTCAAAAAATCTGTTGTATCATGATCGACCAAAGCATATCGACATCCGCTACCACTACATCAGAGAGAAAGTTTTAAACAATGAAGTCAAGCTGGAGAAAATCTCTTCAGCAAATAATCCAGTAGATATGCTTACTAAATCTTTGTCAGCCTTAAGGACGCTTCACCTAATGAACCTAATGAAGGTAGGTGTGGGCTAA ATGCCAGAGGCACTTAGAGGCAGATACGGTGAGGCTTATGTATTTACAATGACAACATCCCCTACTCATGAGGGAGAAGTTGAGAACATGGAGTTCACAGATACTTTGATCAAGGAGGAAGAATTATCTGAAAGTCAAAAGGATGCCTTTAAGATTTTTGTATTTTTCCTAACTGCCTGCATTATTGTACTGATGTTATTGCATTACCTCGTGAGAATGATGGCTCCATTTGAACTAGTAGACTGTGGATTTGGGGACAAAATCAGGTTTGGAATTCTTGTTAAGCGAGAACTGTTGCAGATGATGAAATGGATATTCTCGAAAGGGAGCTCGAAGAGGAACTTGGCCGGAAAGAGCGTAGAAGGAGTTGTCTTAAATCATGGACTAATCTACTCAAGAGGGAGTTCTAAAGATGTGTGTTTAGTTGGTTATGCAGATGCTAACTTTGCTGCTGATTTAGATAAAAGGAGATCAACTTCTGGGTATGTATTTACTTTGTTTGGGAACACAATTAGTTGGAAATCTCAGTTACAATTTGTTACTGCTTTATCGACCACAGAATCTGAATATATCTCCTTGGCAGAATGTGTGAAGGAAGGTATTTGGCTGCAAGGGTTAATTAATGAATTGCTTGGAAATATTGATTTGTTTACTGTTTTTAGTGACAGCCAAAGTGCCCTTGCACTTTCAAAAAATCTGTTGTATCATGATCGACCAAAGCATATCGACATCCGCTACCACTACATCAGAGAGAAAGTTTTAAACAATGAAGTCAAGCTGGAGAAAATCTCTTCAGCAAATAATCCAGTAGATATGCTTACTAAATCTTTGTCAGCCTTAAGGACGCTTCACCTAATGAACCTAATGAAGGTAGGTGTGGGCTAA MPEALRGRYGEAYVFTMTTSPTHEGEVENMEFTDTLIKEEELSESQKDAFKIFVFFLTACIIVLMLLHYLVRMMAPFELVDCGFGDKIRFGILVKRELLQMMKWIFSKGSSKRNLAGKSVEGVVLNHGLIYSRGSSKDVCLVGYADANFAADLDKRRSTSGYVFTLFGNTISWKSQLQFVTALSTTESEYISLAECVKEGIWLQGLINELLGNIDLFTVFSDSQSALALSKNLLYHDRPKHIDIRYHYIREKVLNNEVKLEKISSANNPVDMLTKSLSALRTLHLMNLMKVGVG Homology
BLAST of Lag0018680 vs. NCBI nr
Match: KAG8490001.1 (hypothetical protein CXB51_016020 [Gossypium anomalum]) HSP 1 Score: 170.6 bits (431), Expect = 2.0e-38 Identity = 81/164 (49.39%), Postives = 119/164 (72.56%), Query Frame = 0
BLAST of Lag0018680 vs. NCBI nr
Match: KAG8500047.1 (hypothetical protein CXB51_003575 [Gossypium anomalum]) HSP 1 Score: 169.1 bits (427), Expect = 5.7e-38 Identity = 85/172 (49.42%), Postives = 121/172 (70.35%), Query Frame = 0
BLAST of Lag0018680 vs. NCBI nr
Match: KAG8491911.1 (hypothetical protein CXB51_015266 [Gossypium anomalum]) HSP 1 Score: 169.1 bits (427), Expect = 5.7e-38 Identity = 85/172 (49.42%), Postives = 121/172 (70.35%), Query Frame = 0
BLAST of Lag0018680 vs. NCBI nr
Match: KAG8503419.1 (hypothetical protein CXB51_001394 [Gossypium anomalum]) HSP 1 Score: 169.1 bits (427), Expect = 5.7e-38 Identity = 85/172 (49.42%), Postives = 121/172 (70.35%), Query Frame = 0
BLAST of Lag0018680 vs. NCBI nr
Match: KAG8474379.1 (hypothetical protein CXB51_033977 [Gossypium anomalum]) HSP 1 Score: 169.1 bits (427), Expect = 5.7e-38 Identity = 85/172 (49.42%), Postives = 121/172 (70.35%), Query Frame = 0
BLAST of Lag0018680 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.2e-33 Identity = 74/138 (53.62%), Postives = 97/138 (70.29%), Query Frame = 0
BLAST of Lag0018680 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23 Identity = 61/161 (37.89%), Postives = 99/161 (61.49%), Query Frame = 0
BLAST of Lag0018680 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.5e-17 Identity = 62/171 (36.26%), Postives = 94/171 (54.97%), Query Frame = 0
BLAST of Lag0018680 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 9.9e-17 Identity = 55/156 (35.26%), Postives = 88/156 (56.41%), Query Frame = 0
BLAST of Lag0018680 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.6e-14 Identity = 39/78 (50.00%), Postives = 59/78 (75.64%), Query Frame = 0
BLAST of Lag0018680 vs. ExPASy TrEMBL
Match: A0A2R6QHR4 (Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc18495 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 2.8e-38 Identity = 88/192 (45.83%), Postives = 125/192 (65.10%), Query Frame = 0
BLAST of Lag0018680 vs. ExPASy TrEMBL
Match: A0A4Y1QXX8 (Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_005583 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 4.7e-38 Identity = 79/164 (48.17%), Postives = 117/164 (71.34%), Query Frame = 0
BLAST of Lag0018680 vs. ExPASy TrEMBL
Match: A0A5H2XPK4 (Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_655S000400 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 4.7e-38 Identity = 79/164 (48.17%), Postives = 117/164 (71.34%), Query Frame = 0
BLAST of Lag0018680 vs. ExPASy TrEMBL
Match: A0A4Y1QM47 (Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_000828 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 4.7e-38 Identity = 79/164 (48.17%), Postives = 117/164 (71.34%), Query Frame = 0
BLAST of Lag0018680 vs. ExPASy TrEMBL
Match: A0A4Y1RM13 (Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_016656 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 4.7e-38 Identity = 79/164 (48.17%), Postives = 117/164 (71.34%), Query Frame = 0
BLAST of Lag0018680 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 80.1 bits (196), Expect = 3.3e-15 Identity = 49/134 (36.57%), Postives = 79/134 (58.96%), Query Frame = 0
BLAST of Lag0018680 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein ) HSP 1 Score: 46.2 bits (108), Expect = 5.2e-05 Identity = 29/83 (34.94%), Postives = 45/83 (54.22%), Query Frame = 0
BLAST of Lag0018680 vs. TAIR 10
Match: AT5G61740.1 (ABC2 homolog 14 ) HSP 1 Score: 43.1 bits (100), Expect = 4.4e-04 Identity = 19/29 (65.52%), Postives = 23/29 (79.31%), Query Frame = 0
BLAST of Lag0018680 vs. TAIR 10
Match: AT3G47780.1 (ABC2 homolog 6 ) HSP 1 Score: 42.0 bits (97), Expect = 9.9e-04 Identity = 18/29 (62.07%), Postives = 22/29 (75.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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