Lag0018662 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCACCTTCACTTTCCAAAGGCTAAGTGTCTCCACTCGAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTAGCATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGGTGAAGCCAAATCTCATTATCTTGACCAATCCTGCAAATGAAGGATCTGATCAAGACCATGACAAAGATAAGAGCTTTTAAATGTAAAAGCTCATTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGAGCAAAAAAAAAAAAAAAAATCTTGAACTACGTTATGACTTGATCCCTATTCCATAAGGGTACGTAGGCAGCTTAAAGAAAACTTTAAGTTCAGTCCCTATAAACAAAAAAAAAAGGTTCTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACAACTGCTACGTTGTTCCTCCTCCAAGTGCGAATGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCCTCCGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCAAGTTCGAAGGTTCACACACTTCGCTCCAGTTCCTTCTCCCAAATTCGAAGGTTCTCATGCGCTTCGCGCTGCAGTTCCTTCCCTCCAAGTTTGAAGGTTCTCACATCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCATACGCGCTTCGCCACAGTTCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTTCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCAAGCGCTGTGATTCGTTGCAGTTCCTTCCTCCAAGTTCAAAGTTTCTCATGCGCTTCGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCGCAGCCCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGTTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGCAGTTGACGGCGTTCGCTTCGCTTCATCTTCAAAAATTGACTGTTGA ATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCACCTTCACTTTCCAAAGGCTAAGTGTCTCCACTCGAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTAGCATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGGTTCTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACAACTGCTACGTTGTTCCTCCTCCAAGTGCGAATGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCCTCCGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCAAGTTCGAAGGTTCACACACTTCGCTCCAGTTCCTTCTCCCAAATTCGAAGGTTCTCATGCGCTTCGCGCTGCAGTTCCTTCCCTCCAAGTTTGAAGGTTCTCACATCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCATACGCGCTTCGCCACAGTTCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTTCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCAAGCGCTGTGATTCGTTGCAGTTCCTTCCTCCAAGTTCAAAGTTTCTCATGCGCTTCGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCGCAGCCCCTTCCTCCAAGTTCGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGCAGTTGACGGCGTTCGCTTCGCTTCATCTTCAAAAATTGACTGTTGA ATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCACCTTCACTTTCCAAAGGCTAAGTGTCTCCACTCGAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTAGCATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGGTTCTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACAACTGCTACGTTGTTCCTCCTCCAAGTGCGAATGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCCTCCGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCAAGTTCGAAGGTTCACACACTTCGCTCCAGTTCCTTCTCCCAAATTCGAAGGTTCTCATGCGCTTCGCGCTGCAGTTCCTTCCCTCCAAGTTTGAAGGTTCTCACATCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCATACGCGCTTCGCCACAGTTCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTTCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCAAGCGCTGTGATTCGTTGCAGTTCCTTCCTCCAAGTTCAAAGTTTCTCATGCGCTTCGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCGCAGCCCCTTCCTCCAAGTTCGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGCAGTTGACGGCGTTCGCTTCGCTTCATCTTCAAAAATTGACTGTTGA MSMAATEEENQCSMSTSTHLHFPKAKCLHSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSLKVLRCSSFSPSSRVLTLYAIALFLLQVRRFFVVSCCVVPSPSSRVLSCTTATLFLLQVRMILCGALLHCSLFSQVRWFSRSFAGVSSPQVRRFSRLRCSSFFPRSKVLTRCVAVLSPKFEGSHTSLQFLLPNSKVLMRFALQFLPSKFEGSHIASPQFLPPSSKVHTRFATVLLPPSSKVLTRFATVPSSKFKGSHALRCSSFPQVRRFSRRFAAVPFSKFEGSHIASLRAALRCSSFLQVRRFSLASLQFLPPNSKVSKVLKRCDSLQFLPPSSKFLMRFVAPSSKFEGSRSPFLQVRRFATEVLLLQVRSSPLLLFKCLAAVDVLVPLHLQMLAVDGVRFASSSKIDC Homology
BLAST of Lag0018662 vs. NCBI nr
Match: KAA0036008.1 (Retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 96.7 bits (239), Expect = 5.5e-16 Identity = 56/96 (58.33%), Postives = 65/96 (67.71%), Query Frame = 0
BLAST of Lag0018662 vs. NCBI nr
Match: KAA0050736.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYJ95700.1 retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 96.7 bits (239), Expect = 5.5e-16 Identity = 55/96 (57.29%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of Lag0018662 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 9.3e-16 Identity = 56/96 (58.33%), Postives = 65/96 (67.71%), Query Frame = 0
BLAST of Lag0018662 vs. NCBI nr
Match: KAA0050734.1 (gag protease polyprotein [Cucumis melo var. makuwa] >TYJ95698.1 gag protease polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 9.3e-16 Identity = 56/96 (58.33%), Postives = 65/96 (67.71%), Query Frame = 0
BLAST of Lag0018662 vs. NCBI nr
Match: TYK02147.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 94.4 bits (233), Expect = 2.7e-15 Identity = 57/97 (58.76%), Postives = 68/97 (70.10%), Query Frame = 0
BLAST of Lag0018662 vs. ExPASy TrEMBL
Match: A0A5A7U974 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00280 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.6e-16 Identity = 55/96 (57.29%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of Lag0018662 vs. ExPASy TrEMBL
Match: A0A5A7SZJ7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18735G00010 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.6e-16 Identity = 56/96 (58.33%), Postives = 65/96 (67.71%), Query Frame = 0
BLAST of Lag0018662 vs. ExPASy TrEMBL
Match: A0A5D3BBF9 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00250 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.5e-16 Identity = 56/96 (58.33%), Postives = 65/96 (67.71%), Query Frame = 0
BLAST of Lag0018662 vs. ExPASy TrEMBL
Match: A0A5A7TQ06 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002860 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.5e-16 Identity = 56/96 (58.33%), Postives = 65/96 (67.71%), Query Frame = 0
BLAST of Lag0018662 vs. ExPASy TrEMBL
Match: A0A5A7VRG7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G001010 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.3e-15 Identity = 55/96 (57.29%), Postives = 64/96 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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