Lag0018641 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCCTACACTTGTCCATGCGTGAGATGCCACCCCTTTGATCCAGTTTTTATTGCCCAATCGAACGGAGATTATATTGCAATCTTCTCTCTAAACCCACCTTTCAAGTTAGACAAATACAAGAGGTATGAAAGTCATGGAGTCTCAGGCTTTCCAATAAAATGTAACTTCAGCCTGGATGCCAAGCAGATCATCTCTGGTTCTTCAGATGGCTCTATATATTTTTACGATTATGAATCATCCTTGCCTATACATAAACTAAAAGCATCTGAACAGGCTTGCATAGATGTTGCCATCCACCCGACCTTGCCTAATGTAATTGCTTCCTGCAGCTGGAATGGAAATATTTCACTGTTCCAGTGA ATGGAAGCCTACACTTGTCCATGCGTGAGATGCCACCCCTTTGATCCAGTTTTTATTGCCCAATCGAACGGAGATTATATTGCAATCTTCTCTCTAAACCCACCTTTCAAGTTAGACAAATACAAGAGGTATGAAAGTCATGGAGTCTCAGGCTTTCCAATAAAATGTAACTTCAGCCTGGATGCCAAGCAGATCATCTCTGGTTCTTCAGATGGCTCTATATATTTTTACGATTATGAATCATCCTTGCCTATACATAAACTAAAAGCATCTGAACAGGCTTGCATAGATGTTGCCATCCACCCGACCTTGCCTAATGTAATTGCTTCCTGCAGCTGGAATGGAAATATTTCACTGTTCCAGTGA ATGGAAGCCTACACTTGTCCATGCGTGAGATGCCACCCCTTTGATCCAGTTTTTATTGCCCAATCGAACGGAGATTATATTGCAATCTTCTCTCTAAACCCACCTTTCAAGTTAGACAAATACAAGAGGTATGAAAGTCATGGAGTCTCAGGCTTTCCAATAAAATGTAACTTCAGCCTGGATGCCAAGCAGATCATCTCTGGTTCTTCAGATGGCTCTATATATTTTTACGATTATGAATCATCCTTGCCTATACATAAACTAAAAGCATCTGAACAGGCTTGCATAGATGTTGCCATCCACCCGACCTTGCCTAATGTAATTGCTTCCTGCAGCTGGAATGGAAATATTTCACTGTTCCAGTGA MEAYTCPCVRCHPFDPVFIAQSNGDYIAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDAKQIISGSSDGSIYFYDYESSLPIHKLKASEQACIDVAIHPTLPNVIASCSWNGNISLFQ Homology
BLAST of Lag0018641 vs. NCBI nr
Match: XP_016901209.1 (PREDICTED: WD repeat-containing protein 25 isoform X1 [Cucumis melo]) HSP 1 Score: 247.7 bits (631), Expect = 5.2e-62 Identity = 114/121 (94.21%), Postives = 117/121 (96.69%), Query Frame = 0
BLAST of Lag0018641 vs. NCBI nr
Match: XP_022941667.1 (WD repeat-containing protein 25 [Cucurbita moschata]) HSP 1 Score: 246.1 bits (627), Expect = 1.5e-61 Identity = 114/121 (94.21%), Postives = 116/121 (95.87%), Query Frame = 0
BLAST of Lag0018641 vs. NCBI nr
Match: KAG6600751.1 (WD repeat-containing protein 25, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 246.1 bits (627), Expect = 1.5e-61 Identity = 114/121 (94.21%), Postives = 116/121 (95.87%), Query Frame = 0
BLAST of Lag0018641 vs. NCBI nr
Match: XP_038903500.1 (WD repeat-containing protein 25 [Benincasa hispida]) HSP 1 Score: 245.0 bits (624), Expect = 3.4e-61 Identity = 113/121 (93.39%), Postives = 116/121 (95.87%), Query Frame = 0
BLAST of Lag0018641 vs. NCBI nr
Match: XP_023526021.1 (WD repeat-containing protein 25 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 244.2 bits (622), Expect = 5.8e-61 Identity = 113/121 (93.39%), Postives = 116/121 (95.87%), Query Frame = 0
BLAST of Lag0018641 vs. ExPASy Swiss-Prot
Match: Q64LD2 (WD repeat-containing protein 25 OS=Homo sapiens OX=9606 GN=WDR25 PE=1 SV=3) HSP 1 Score: 117.5 bits (293), Expect = 1.1e-25 Identity = 45/119 (37.82%), Postives = 77/119 (64.71%), Query Frame = 0
BLAST of Lag0018641 vs. ExPASy Swiss-Prot
Match: E9Q349 (WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 4.1e-25 Identity = 45/119 (37.82%), Postives = 76/119 (63.87%), Query Frame = 0
BLAST of Lag0018641 vs. ExPASy Swiss-Prot
Match: P40968 (Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CDC40 PE=1 SV=2) HSP 1 Score: 55.1 bits (131), Expect = 6.5e-07 Identity = 27/86 (31.40%), Postives = 45/86 (52.33%), Query Frame = 0
BLAST of Lag0018641 vs. ExPASy Swiss-Prot
Match: A8X8C6 (WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae OX=6238 GN=tag-125 PE=4 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.8e-04 Identity = 33/95 (34.74%), Postives = 49/95 (51.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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