Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTCTTTAATTCCGAATGAACATAATTCAAATGAAGTAGCCTTCAACATTGAACAACTTAATGGTGAAGCGAGAATTTACTCGATTGATTGGTATCATACCTCTAATGATGTTTCTAAAGATGTGGAAAGAGGTGAGGAGTCAGACGATGGTGATGAGAGACCAACTTCACCAAACTTAGAATTAGATGTGCATGTTGAGATTGAATGGGAAGTTGAGTCGGTTTATGGGTCAAAGGATGTCCTAAATAATCCACATTTTTCTGAAGGAGATGAGGTGGATGGAGAACTAGAGTTCAGGGTAGAGACTGATATAGATAATATTCGATTTTGTGTAGGTATGAAATTTAGCAGTTCTAAAATCTTAAAAGATGCTATAGAGGACTATGCACTTAAGGAGTCTTACAATGTGAAGCTAAAAAAGAATGACAAGAAAAGAGTCACTGCAATTTATTCTGATGGGTGTAAGTGGAGGTTGCATGGAAGCGTTGTGGATGCAAATAATACATTTCAAATTAAGTCAATGATTAGTGAACATACATGTCCTAGGATGTTTCACAATAGAAATACAAACTCATCTTGGTTGGCCAAGAAATACATTGACCGTATTAGAAACCAACCTGATTGGAGTCTCACTCAATTCATTGAAACAGTAAAAAATGATTATCAAGTTCAAATTTCGAGGACCCAAGCTTATAAGGCTAGAAGGAAGGCCTTGATAAAGATTAATGGGAATCTCTTGGAACGATACAGGCGATTATGA
mRNA sequence
ATGGTTTCTTTAATTCCGAATGAACATAATTCAAATGAAGTAGCCTTCAACATTGAACAACTTAATGGTGAAGCGAGAATTTACTCGATTGATTGGTATCATACCTCTAATGATGTTTCTAAAGATGTGGAAAGAGGTGAGGAGTCAGACGATGGTGATGAGAGACCAACTTCACCAAACTTAGAATTAGATGTGCATGTTGAGATTGAATGGGAAGTTGAGTCGGTTTATGGGTCAAAGGATGTCCTAAATAATCCACATTTTTCTGAAGGAGATGAGGTGGATGGAGAACTAGAGTTCAGGGTAGAGACTGATATAGATAATATTCGATTTTGTGTAGGTATGAAATTTAGCAGTTCTAAAATCTTAAAAGATGCTATAGAGGACTATGCACTTAAGGAGTCTTACAATGTGAAGCTAAAAAAGAATGACAAGAAAAGAGTCACTGCAATTTATTCTGATGGGTGTAAGTGGAGGTTGCATGGAAGCGTTGTGGATGCAAATAATACATTTCAAATTAAGTCAATGATTAGTGAACATACATGTCCTAGGATGTTTCACAATAGAAATACAAACTCATCTTGGTTGGCCAAGAAATACATTGACCGTATTAGAAACCAACCTGATTGGAGTCTCACTCAATTCATTGAAACAGTAAAAAATGATTATCAAGTTCAAATTTCGAGGACCCAAGCTTATAAGGCTAGAAGGAAGGCCTTGATAAAGATTAATGGGAATCTCTTGGAACGATACAGGCGATTATGA
Coding sequence (CDS)
ATGGTTTCTTTAATTCCGAATGAACATAATTCAAATGAAGTAGCCTTCAACATTGAACAACTTAATGGTGAAGCGAGAATTTACTCGATTGATTGGTATCATACCTCTAATGATGTTTCTAAAGATGTGGAAAGAGGTGAGGAGTCAGACGATGGTGATGAGAGACCAACTTCACCAAACTTAGAATTAGATGTGCATGTTGAGATTGAATGGGAAGTTGAGTCGGTTTATGGGTCAAAGGATGTCCTAAATAATCCACATTTTTCTGAAGGAGATGAGGTGGATGGAGAACTAGAGTTCAGGGTAGAGACTGATATAGATAATATTCGATTTTGTGTAGGTATGAAATTTAGCAGTTCTAAAATCTTAAAAGATGCTATAGAGGACTATGCACTTAAGGAGTCTTACAATGTGAAGCTAAAAAAGAATGACAAGAAAAGAGTCACTGCAATTTATTCTGATGGGTGTAAGTGGAGGTTGCATGGAAGCGTTGTGGATGCAAATAATACATTTCAAATTAAGTCAATGATTAGTGAACATACATGTCCTAGGATGTTTCACAATAGAAATACAAACTCATCTTGGTTGGCCAAGAAATACATTGACCGTATTAGAAACCAACCTGATTGGAGTCTCACTCAATTCATTGAAACAGTAAAAAATGATTATCAAGTTCAAATTTCGAGGACCCAAGCTTATAAGGCTAGAAGGAAGGCCTTGATAAAGATTAATGGGAATCTCTTGGAACGATACAGGCGATTATGA
Protein sequence
MVSLIPNEHNSNEVAFNIEQLNGEARIYSIDWYHTSNDVSKDVERGEESDDGDERPTSPNLELDVHVEIEWEVESVYGSKDVLNNPHFSEGDEVDGELEFRVETDIDNIRFCVGMKFSSSKILKDAIEDYALKESYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKSMISEHTCPRMFHNRNTNSSWLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKARRKALIKINGNLLERYRRL
Homology
BLAST of Lag0018562 vs. NCBI nr
Match:
XP_020080379.1 (uncharacterized protein LOC109704055 [Ananas comosus])
HSP 1 Score: 152.5 bits (384), Expect = 4.8e-33
Identity = 75/156 (48.08%), Postives = 100/156 (64.10%), Query Frame = 0
Query: 99 EFRVETDIDNIRFCVGMKFSSSKILKDAIEDYALKESYNVKLKKNDKKRVTAIYSDGCKW 158
EFR ETD+ N +F +GM F+S K + AI +Y++K YN+KL KN+K +V A+ +GC W
Sbjct: 307 EFRAETDMQNPQFGIGMLFASMKEFRQAIREYSIKNRYNIKLVKNEKDKVRAVCKEGCPW 366
Query: 159 RLHGSVVDANNTFQIKSMISEHTCPRMFHNRNTNSSWLAKKYIDRIRNQPDWSLTQFIET 218
++ S + T Q+K SEH C + F N+ SSWLAKKYIDR RN P W LT F E
Sbjct: 367 LIYASWITDKKTVQVKRYDSEHKCFKNFKNKFVTSSWLAKKYIDRFRNNPKWPLTAFGEC 426
Query: 219 VKNDYQVQISRTQAYKARRKALIKINGNLLERYRRL 255
V D V +SRT+ Y+A+RKAL I G+ E+Y L
Sbjct: 427 VTADIHVSVSRTKLYRAKRKALRLIEGSEAEQYATL 462
BLAST of Lag0018562 vs. NCBI nr
Match:
XP_028052320.1 (uncharacterized protein LOC114256842 [Camellia sinensis])
HSP 1 Score: 144.1 bits (362), Expect = 1.7e-30
Identity = 82/240 (34.17%), Postives = 136/240 (56.67%), Query Frame = 0
Query: 33 YHTSNDVSKDVERGEESD-----DGDERPTSPNLELDVHVEIEWEVESVYGSKDVLNN-- 92
Y+ +N K+ + +SD + ++ PT ++ D +VE E E ++ + N
Sbjct: 101 YNEANSEDKENDDSSDSDFLASTEDEDDPTDDDIMFDGNVEKEPNGEGGNAFEEYVMNDE 160
Query: 93 --------PHFSEGDEVDGE---LEFRVETDIDNIRFCVGMKFSSSKILKDAIEDYALKE 152
H DE +G+ LEFR E D N F +GM F+++ KDA+ +YA+K
Sbjct: 161 DSFEEELLTHEGSDDEGNGKPKNLEFRPEFDKANFEFKIGMLFNNAIEFKDAVREYAVKG 220
Query: 153 SYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKSMISEHTCPRMFHNRNTNSS 212
Y+VK K++ +V SDGC+WRL+ S + NT QIK+ HTC R + +R S+
Sbjct: 221 GYDVKFTKSETWKVQVSCSDGCEWRLYASNMSGENTLQIKTYKPTHTCNRSYKSRQVTSA 280
Query: 213 WLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKARRKALIKINGNLLERYRRL 255
+LA KY+++ R P W + +F +TVK+D V+IS+ + Y+AR++AL++++G E+Y +L
Sbjct: 281 FLASKYMNKFRTTPTWKINEFKDTVKDDCVVEISKMKCYRARKQALVQLDGTNAEQYTKL 340
BLAST of Lag0018562 vs. NCBI nr
Match:
VVA36347.1 (PREDICTED: transposon [Prunus dulcis])
HSP 1 Score: 143.3 bits (360), Expect = 2.9e-30
Identity = 75/195 (38.46%), Postives = 114/195 (58.46%), Query Frame = 0
Query: 60 NLELDVHVEIEWEVESVYGSKDVLNNPHFSEGDEVDGELEFRVETDIDNIRFCVGMKFSS 119
N E ++ VE E Y S ++ + + E EF ++TD+DN +F VGMKF S
Sbjct: 28 NWETNIQVEDMNMDEKQYNSDELHSASNSYEEGTTRKYKEFNIDTDMDNPQFDVGMKFPS 87
Query: 120 SKILKDAIEDYALKESYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKSMISE 179
K+LK AI+ Y SY K+ KNDK R++A +GCKWRL+ S++ NT+QIKS +
Sbjct: 88 KKVLKQAIQIYGALRSYECKVVKNDKFRLSAKCKEGCKWRLYASLMQGENTYQIKSYTPK 147
Query: 180 HTCPRMFHNRNTNSSWLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKARRKA 239
H+C + FHN+N S++L+++Y+ RI++ P T V + ++S Q YKA+RKA
Sbjct: 148 HSCSKGFHNKNITSTFLSQRYMSRIKDDPKIKKTTLQSEVHRELGYEVSTDQCYKAKRKA 207
Query: 240 LIKINGNLLERYRRL 255
I G ++Y +L
Sbjct: 208 QTLIEGTYAQQYEKL 222
BLAST of Lag0018562 vs. NCBI nr
Match:
XP_034229423.1 (uncharacterized protein LOC117638399 [Prunus dulcis])
HSP 1 Score: 143.3 bits (360), Expect = 2.9e-30
Identity = 75/195 (38.46%), Postives = 114/195 (58.46%), Query Frame = 0
Query: 60 NLELDVHVEIEWEVESVYGSKDVLNNPHFSEGDEVDGELEFRVETDIDNIRFCVGMKFSS 119
N E ++ VE E Y S ++ + + E EF ++TD+DN +F VGMKF S
Sbjct: 220 NWETNIQVEDMNMDEKQYNSDELHSASNSYEEGTTRKYKEFNIDTDMDNPQFDVGMKFPS 279
Query: 120 SKILKDAIEDYALKESYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKSMISE 179
K+LK AI+ Y SY K+ KNDK R++A +GCKWRL+ S++ NT+QIKS +
Sbjct: 280 KKVLKQAIQIYGALRSYECKVVKNDKFRLSAKCKEGCKWRLYASLMQGENTYQIKSYTPK 339
Query: 180 HTCPRMFHNRNTNSSWLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKARRKA 239
H+C + FHN+N S++L+++Y+ RI++ P T V + ++S Q YKA+RKA
Sbjct: 340 HSCSKGFHNKNITSTFLSQRYMSRIKDDPKIKKTTLQSEVHRELGYEVSTDQCYKAKRKA 399
Query: 240 LIKINGNLLERYRRL 255
I G ++Y +L
Sbjct: 400 QTLIEGTYAQQYEKL 414
BLAST of Lag0018562 vs. NCBI nr
Match:
XP_020417204.1 (uncharacterized protein LOC18781319 [Prunus persica])
HSP 1 Score: 142.5 bits (358), Expect = 5.0e-30
Identity = 84/245 (34.29%), Postives = 129/245 (52.65%), Query Frame = 0
Query: 17 NIEQLNGEARIYSIDWYHTSNDVS-------KDVERGEESDDGDERPTSPNLELDVHVEI 76
N E+ + + ++Y ND DV E+ G + N E D+ VE
Sbjct: 208 NYEENDNDGNNSDSEFYDEDNDAMLDDDNFYDDVVDTLETFIGCGKKQKNNWETDIQVED 267
Query: 77 EWEVESVYGSKDVLNNPHFSEGDEVDGELEFRVETDIDNIRFCVGMKFSSSKILKDAIED 136
E Y S ++ + + E E ++TD+DN +F VGMKF S K+LK AI+
Sbjct: 268 MNMDEEKYNSDELHSASNSDEEGTTRRYKELNIDTDMDNPQFDVGMKFPSKKVLKQAIQI 327
Query: 137 YALKESYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKSMISEHTCPRMFHNR 196
Y SY K+ KNDK R++A +GCKWRL+ S++ NT+QIKS +H+C + FHN+
Sbjct: 328 YGALRSYECKVVKNDKFRLSAKCKEGCKWRLYASLMQGENTYQIKSYTPKHSCSKGFHNK 387
Query: 197 NTNSSWLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKARRKALIKINGNLLE 255
N S++L+++Y+ RI++ P T V + ++S Q YKA+RKA I G +
Sbjct: 388 NITSTFLSQRYMSRIKDDPKIKKTTLQSEVHRELGYEVSTDQCYKAKRKAQTLIEGTYAQ 447
BLAST of Lag0018562 vs. ExPASy TrEMBL
Match:
A0A6P5EAS5 (uncharacterized protein LOC109704055 OS=Ananas comosus OX=4615 GN=LOC109704055 PE=4 SV=1)
HSP 1 Score: 152.5 bits (384), Expect = 2.3e-33
Identity = 75/156 (48.08%), Postives = 100/156 (64.10%), Query Frame = 0
Query: 99 EFRVETDIDNIRFCVGMKFSSSKILKDAIEDYALKESYNVKLKKNDKKRVTAIYSDGCKW 158
EFR ETD+ N +F +GM F+S K + AI +Y++K YN+KL KN+K +V A+ +GC W
Sbjct: 307 EFRAETDMQNPQFGIGMLFASMKEFRQAIREYSIKNRYNIKLVKNEKDKVRAVCKEGCPW 366
Query: 159 RLHGSVVDANNTFQIKSMISEHTCPRMFHNRNTNSSWLAKKYIDRIRNQPDWSLTQFIET 218
++ S + T Q+K SEH C + F N+ SSWLAKKYIDR RN P W LT F E
Sbjct: 367 LIYASWITDKKTVQVKRYDSEHKCFKNFKNKFVTSSWLAKKYIDRFRNNPKWPLTAFGEC 426
Query: 219 VKNDYQVQISRTQAYKARRKALIKINGNLLERYRRL 255
V D V +SRT+ Y+A+RKAL I G+ E+Y L
Sbjct: 427 VTADIHVSVSRTKLYRAKRKALRLIEGSEAEQYATL 462
BLAST of Lag0018562 vs. ExPASy TrEMBL
Match:
A0A5E4G990 (PREDICTED: transposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B031986 PE=4 SV=1)
HSP 1 Score: 143.3 bits (360), Expect = 1.4e-30
Identity = 75/195 (38.46%), Postives = 114/195 (58.46%), Query Frame = 0
Query: 60 NLELDVHVEIEWEVESVYGSKDVLNNPHFSEGDEVDGELEFRVETDIDNIRFCVGMKFSS 119
N E ++ VE E Y S ++ + + E EF ++TD+DN +F VGMKF S
Sbjct: 28 NWETNIQVEDMNMDEKQYNSDELHSASNSYEEGTTRKYKEFNIDTDMDNPQFDVGMKFPS 87
Query: 120 SKILKDAIEDYALKESYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKSMISE 179
K+LK AI+ Y SY K+ KNDK R++A +GCKWRL+ S++ NT+QIKS +
Sbjct: 88 KKVLKQAIQIYGALRSYECKVVKNDKFRLSAKCKEGCKWRLYASLMQGENTYQIKSYTPK 147
Query: 180 HTCPRMFHNRNTNSSWLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKARRKA 239
H+C + FHN+N S++L+++Y+ RI++ P T V + ++S Q YKA+RKA
Sbjct: 148 HSCSKGFHNKNITSTFLSQRYMSRIKDDPKIKKTTLQSEVHRELGYEVSTDQCYKAKRKA 207
Query: 240 LIKINGNLLERYRRL 255
I G ++Y +L
Sbjct: 208 QTLIEGTYAQQYEKL 222
BLAST of Lag0018562 vs. ExPASy TrEMBL
Match:
M5X0G1 (ZnF_PMZ domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa025235mg PE=4 SV=1)
HSP 1 Score: 142.5 bits (358), Expect = 2.4e-30
Identity = 84/245 (34.29%), Postives = 129/245 (52.65%), Query Frame = 0
Query: 17 NIEQLNGEARIYSIDWYHTSNDVS-------KDVERGEESDDGDERPTSPNLELDVHVEI 76
N E+ + + ++Y ND DV E+ G + N E D+ VE
Sbjct: 189 NYEENDNDGNNSDSEFYDEDNDAMLDDDNFYDDVVDTLETFIGCGKKQKNNWETDIQVED 248
Query: 77 EWEVESVYGSKDVLNNPHFSEGDEVDGELEFRVETDIDNIRFCVGMKFSSSKILKDAIED 136
E Y S ++ + + E E ++TD+DN +F VGMKF S K+LK AI+
Sbjct: 249 MNMDEEKYNSDELHSASNSDEEGTTRRYKELNIDTDMDNPQFDVGMKFPSKKVLKQAIQI 308
Query: 137 YALKESYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKSMISEHTCPRMFHNR 196
Y SY K+ KNDK R++A +GCKWRL+ S++ NT+QIKS +H+C + FHN+
Sbjct: 309 YGALRSYECKVVKNDKFRLSAKCKEGCKWRLYASLMQGENTYQIKSYTPKHSCSKGFHNK 368
Query: 197 NTNSSWLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKARRKALIKINGNLLE 255
N S++L+++Y+ RI++ P T V + ++S Q YKA+RKA I G +
Sbjct: 369 NITSTFLSQRYMSRIKDDPKIKKTTLQSEVHRELGYEVSTDQCYKAKRKAQTLIEGTYAQ 428
BLAST of Lag0018562 vs. ExPASy TrEMBL
Match:
A0A251PFQ5 (ZnF_PMZ domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_4G046500 PE=4 SV=1)
HSP 1 Score: 142.5 bits (358), Expect = 2.4e-30
Identity = 84/245 (34.29%), Postives = 129/245 (52.65%), Query Frame = 0
Query: 17 NIEQLNGEARIYSIDWYHTSNDVS-------KDVERGEESDDGDERPTSPNLELDVHVEI 76
N E+ + + ++Y ND DV E+ G + N E D+ VE
Sbjct: 208 NYEENDNDGNNSDSEFYDEDNDAMLDDDNFYDDVVDTLETFIGCGKKQKNNWETDIQVED 267
Query: 77 EWEVESVYGSKDVLNNPHFSEGDEVDGELEFRVETDIDNIRFCVGMKFSSSKILKDAIED 136
E Y S ++ + + E E ++TD+DN +F VGMKF S K+LK AI+
Sbjct: 268 MNMDEEKYNSDELHSASNSDEEGTTRRYKELNIDTDMDNPQFDVGMKFPSKKVLKQAIQI 327
Query: 137 YALKESYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKSMISEHTCPRMFHNR 196
Y SY K+ KNDK R++A +GCKWRL+ S++ NT+QIKS +H+C + FHN+
Sbjct: 328 YGALRSYECKVVKNDKFRLSAKCKEGCKWRLYASLMQGENTYQIKSYTPKHSCSKGFHNK 387
Query: 197 NTNSSWLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKARRKALIKINGNLLE 255
N S++L+++Y+ RI++ P T V + ++S Q YKA+RKA I G +
Sbjct: 388 NITSTFLSQRYMSRIKDDPKIKKTTLQSEVHRELGYEVSTDQCYKAKRKAQTLIEGTYAQ 447
BLAST of Lag0018562 vs. ExPASy TrEMBL
Match:
A0A2N9HT52 (SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43374 PE=4 SV=1)
HSP 1 Score: 141.4 bits (355), Expect = 5.4e-30
Identity = 77/199 (38.69%), Postives = 117/199 (58.79%), Query Frame = 0
Query: 56 PTSPNLELDVHVEIEWEVESVYGSKDVLNNPHFSEGDEVDGELEFRVETDIDNIRFCVGM 115
P SP + + + + S YGS D LN+P+ S+ + +FR TD+D+ F VGM
Sbjct: 250 PNSPYPIISIDPIDDIPIGSDYGSSDQLNSPNNSDDEPHHIYPDFRA-TDLDDPVFTVGM 309
Query: 116 KFSSSKILKDAIEDYALKESYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKS 175
F + LK+A+ Y LK + ++ KN++ +V +GC W+L D +FQI S
Sbjct: 310 YFRDNIELKEAVFAYRLKHGFGLRFTKNERWKVRVRCVEGCPWKLFAGRGDDGESFQINS 369
Query: 176 MISEHTCPRMFHNRNTNSSWLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKA 235
S HTC R FH+R +S W+AKKYID R PD L + I V D++V++SR++AY+A
Sbjct: 370 FESVHTCSRAFHSRAVSSRWVAKKYIDHFRINPDMELDELIGKVMKDHEVELSRSKAYRA 429
Query: 236 RRKALIKINGNLLERYRRL 255
++ A + I G+ LE+YRR+
Sbjct: 430 KQYAKVLIEGSYLEQYRRV 447
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6P5EAS5 | 2.3e-33 | 48.08 | uncharacterized protein LOC109704055 OS=Ananas comosus OX=4615 GN=LOC109704055 P... | [more] |
A0A5E4G990 | 1.4e-30 | 38.46 | PREDICTED: transposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B031986 PE=4 SV=1 | [more] |
M5X0G1 | 2.4e-30 | 34.29 | ZnF_PMZ domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_... | [more] |
A0A251PFQ5 | 2.4e-30 | 34.29 | ZnF_PMZ domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_4G046500 PE... | [more] |
A0A2N9HT52 | 5.4e-30 | 38.69 | SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4337... | [more] |
Match Name | E-value | Identity | Description | |