Lag0018562 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0018562
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionSWIM-type domain-containing protein
Locationchr5: 29538612 .. 29539376 (+)
RNA-Seq ExpressionLag0018562
SyntenyLag0018562
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTCTTTAATTCCGAATGAACATAATTCAAATGAAGTAGCCTTCAACATTGAACAACTTAATGGTGAAGCGAGAATTTACTCGATTGATTGGTATCATACCTCTAATGATGTTTCTAAAGATGTGGAAAGAGGTGAGGAGTCAGACGATGGTGATGAGAGACCAACTTCACCAAACTTAGAATTAGATGTGCATGTTGAGATTGAATGGGAAGTTGAGTCGGTTTATGGGTCAAAGGATGTCCTAAATAATCCACATTTTTCTGAAGGAGATGAGGTGGATGGAGAACTAGAGTTCAGGGTAGAGACTGATATAGATAATATTCGATTTTGTGTAGGTATGAAATTTAGCAGTTCTAAAATCTTAAAAGATGCTATAGAGGACTATGCACTTAAGGAGTCTTACAATGTGAAGCTAAAAAAGAATGACAAGAAAAGAGTCACTGCAATTTATTCTGATGGGTGTAAGTGGAGGTTGCATGGAAGCGTTGTGGATGCAAATAATACATTTCAAATTAAGTCAATGATTAGTGAACATACATGTCCTAGGATGTTTCACAATAGAAATACAAACTCATCTTGGTTGGCCAAGAAATACATTGACCGTATTAGAAACCAACCTGATTGGAGTCTCACTCAATTCATTGAAACAGTAAAAAATGATTATCAAGTTCAAATTTCGAGGACCCAAGCTTATAAGGCTAGAAGGAAGGCCTTGATAAAGATTAATGGGAATCTCTTGGAACGATACAGGCGATTATGA

mRNA sequence

ATGGTTTCTTTAATTCCGAATGAACATAATTCAAATGAAGTAGCCTTCAACATTGAACAACTTAATGGTGAAGCGAGAATTTACTCGATTGATTGGTATCATACCTCTAATGATGTTTCTAAAGATGTGGAAAGAGGTGAGGAGTCAGACGATGGTGATGAGAGACCAACTTCACCAAACTTAGAATTAGATGTGCATGTTGAGATTGAATGGGAAGTTGAGTCGGTTTATGGGTCAAAGGATGTCCTAAATAATCCACATTTTTCTGAAGGAGATGAGGTGGATGGAGAACTAGAGTTCAGGGTAGAGACTGATATAGATAATATTCGATTTTGTGTAGGTATGAAATTTAGCAGTTCTAAAATCTTAAAAGATGCTATAGAGGACTATGCACTTAAGGAGTCTTACAATGTGAAGCTAAAAAAGAATGACAAGAAAAGAGTCACTGCAATTTATTCTGATGGGTGTAAGTGGAGGTTGCATGGAAGCGTTGTGGATGCAAATAATACATTTCAAATTAAGTCAATGATTAGTGAACATACATGTCCTAGGATGTTTCACAATAGAAATACAAACTCATCTTGGTTGGCCAAGAAATACATTGACCGTATTAGAAACCAACCTGATTGGAGTCTCACTCAATTCATTGAAACAGTAAAAAATGATTATCAAGTTCAAATTTCGAGGACCCAAGCTTATAAGGCTAGAAGGAAGGCCTTGATAAAGATTAATGGGAATCTCTTGGAACGATACAGGCGATTATGA

Coding sequence (CDS)

ATGGTTTCTTTAATTCCGAATGAACATAATTCAAATGAAGTAGCCTTCAACATTGAACAACTTAATGGTGAAGCGAGAATTTACTCGATTGATTGGTATCATACCTCTAATGATGTTTCTAAAGATGTGGAAAGAGGTGAGGAGTCAGACGATGGTGATGAGAGACCAACTTCACCAAACTTAGAATTAGATGTGCATGTTGAGATTGAATGGGAAGTTGAGTCGGTTTATGGGTCAAAGGATGTCCTAAATAATCCACATTTTTCTGAAGGAGATGAGGTGGATGGAGAACTAGAGTTCAGGGTAGAGACTGATATAGATAATATTCGATTTTGTGTAGGTATGAAATTTAGCAGTTCTAAAATCTTAAAAGATGCTATAGAGGACTATGCACTTAAGGAGTCTTACAATGTGAAGCTAAAAAAGAATGACAAGAAAAGAGTCACTGCAATTTATTCTGATGGGTGTAAGTGGAGGTTGCATGGAAGCGTTGTGGATGCAAATAATACATTTCAAATTAAGTCAATGATTAGTGAACATACATGTCCTAGGATGTTTCACAATAGAAATACAAACTCATCTTGGTTGGCCAAGAAATACATTGACCGTATTAGAAACCAACCTGATTGGAGTCTCACTCAATTCATTGAAACAGTAAAAAATGATTATCAAGTTCAAATTTCGAGGACCCAAGCTTATAAGGCTAGAAGGAAGGCCTTGATAAAGATTAATGGGAATCTCTTGGAACGATACAGGCGATTATGA

Protein sequence

MVSLIPNEHNSNEVAFNIEQLNGEARIYSIDWYHTSNDVSKDVERGEESDDGDERPTSPNLELDVHVEIEWEVESVYGSKDVLNNPHFSEGDEVDGELEFRVETDIDNIRFCVGMKFSSSKILKDAIEDYALKESYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKSMISEHTCPRMFHNRNTNSSWLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKARRKALIKINGNLLERYRRL
Homology
BLAST of Lag0018562 vs. NCBI nr
Match: XP_020080379.1 (uncharacterized protein LOC109704055 [Ananas comosus])

HSP 1 Score: 152.5 bits (384), Expect = 4.8e-33
Identity = 75/156 (48.08%), Postives = 100/156 (64.10%), Query Frame = 0

Query: 99  EFRVETDIDNIRFCVGMKFSSSKILKDAIEDYALKESYNVKLKKNDKKRVTAIYSDGCKW 158
           EFR ETD+ N +F +GM F+S K  + AI +Y++K  YN+KL KN+K +V A+  +GC W
Sbjct: 307 EFRAETDMQNPQFGIGMLFASMKEFRQAIREYSIKNRYNIKLVKNEKDKVRAVCKEGCPW 366

Query: 159 RLHGSVVDANNTFQIKSMISEHTCPRMFHNRNTNSSWLAKKYIDRIRNQPDWSLTQFIET 218
            ++ S +    T Q+K   SEH C + F N+   SSWLAKKYIDR RN P W LT F E 
Sbjct: 367 LIYASWITDKKTVQVKRYDSEHKCFKNFKNKFVTSSWLAKKYIDRFRNNPKWPLTAFGEC 426

Query: 219 VKNDYQVQISRTQAYKARRKALIKINGNLLERYRRL 255
           V  D  V +SRT+ Y+A+RKAL  I G+  E+Y  L
Sbjct: 427 VTADIHVSVSRTKLYRAKRKALRLIEGSEAEQYATL 462

BLAST of Lag0018562 vs. NCBI nr
Match: XP_028052320.1 (uncharacterized protein LOC114256842 [Camellia sinensis])

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-30
Identity = 82/240 (34.17%), Postives = 136/240 (56.67%), Query Frame = 0

Query: 33  YHTSNDVSKDVERGEESD-----DGDERPTSPNLELDVHVEIEWEVESVYGSKDVLNN-- 92
           Y+ +N   K+ +   +SD     + ++ PT  ++  D +VE E   E     ++ + N  
Sbjct: 101 YNEANSEDKENDDSSDSDFLASTEDEDDPTDDDIMFDGNVEKEPNGEGGNAFEEYVMNDE 160

Query: 93  --------PHFSEGDEVDGE---LEFRVETDIDNIRFCVGMKFSSSKILKDAIEDYALKE 152
                    H    DE +G+   LEFR E D  N  F +GM F+++   KDA+ +YA+K 
Sbjct: 161 DSFEEELLTHEGSDDEGNGKPKNLEFRPEFDKANFEFKIGMLFNNAIEFKDAVREYAVKG 220

Query: 153 SYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKSMISEHTCPRMFHNRNTNSS 212
            Y+VK  K++  +V    SDGC+WRL+ S +   NT QIK+    HTC R + +R   S+
Sbjct: 221 GYDVKFTKSETWKVQVSCSDGCEWRLYASNMSGENTLQIKTYKPTHTCNRSYKSRQVTSA 280

Query: 213 WLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKARRKALIKINGNLLERYRRL 255
           +LA KY+++ R  P W + +F +TVK+D  V+IS+ + Y+AR++AL++++G   E+Y +L
Sbjct: 281 FLASKYMNKFRTTPTWKINEFKDTVKDDCVVEISKMKCYRARKQALVQLDGTNAEQYTKL 340

BLAST of Lag0018562 vs. NCBI nr
Match: VVA36347.1 (PREDICTED: transposon [Prunus dulcis])

HSP 1 Score: 143.3 bits (360), Expect = 2.9e-30
Identity = 75/195 (38.46%), Postives = 114/195 (58.46%), Query Frame = 0

Query: 60  NLELDVHVEIEWEVESVYGSKDVLNNPHFSEGDEVDGELEFRVETDIDNIRFCVGMKFSS 119
           N E ++ VE     E  Y S ++ +  +  E        EF ++TD+DN +F VGMKF S
Sbjct: 28  NWETNIQVEDMNMDEKQYNSDELHSASNSYEEGTTRKYKEFNIDTDMDNPQFDVGMKFPS 87

Query: 120 SKILKDAIEDYALKESYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKSMISE 179
            K+LK AI+ Y    SY  K+ KNDK R++A   +GCKWRL+ S++   NT+QIKS   +
Sbjct: 88  KKVLKQAIQIYGALRSYECKVVKNDKFRLSAKCKEGCKWRLYASLMQGENTYQIKSYTPK 147

Query: 180 HTCPRMFHNRNTNSSWLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKARRKA 239
           H+C + FHN+N  S++L+++Y+ RI++ P    T     V  +   ++S  Q YKA+RKA
Sbjct: 148 HSCSKGFHNKNITSTFLSQRYMSRIKDDPKIKKTTLQSEVHRELGYEVSTDQCYKAKRKA 207

Query: 240 LIKINGNLLERYRRL 255
              I G   ++Y +L
Sbjct: 208 QTLIEGTYAQQYEKL 222

BLAST of Lag0018562 vs. NCBI nr
Match: XP_034229423.1 (uncharacterized protein LOC117638399 [Prunus dulcis])

HSP 1 Score: 143.3 bits (360), Expect = 2.9e-30
Identity = 75/195 (38.46%), Postives = 114/195 (58.46%), Query Frame = 0

Query: 60  NLELDVHVEIEWEVESVYGSKDVLNNPHFSEGDEVDGELEFRVETDIDNIRFCVGMKFSS 119
           N E ++ VE     E  Y S ++ +  +  E        EF ++TD+DN +F VGMKF S
Sbjct: 220 NWETNIQVEDMNMDEKQYNSDELHSASNSYEEGTTRKYKEFNIDTDMDNPQFDVGMKFPS 279

Query: 120 SKILKDAIEDYALKESYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKSMISE 179
            K+LK AI+ Y    SY  K+ KNDK R++A   +GCKWRL+ S++   NT+QIKS   +
Sbjct: 280 KKVLKQAIQIYGALRSYECKVVKNDKFRLSAKCKEGCKWRLYASLMQGENTYQIKSYTPK 339

Query: 180 HTCPRMFHNRNTNSSWLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKARRKA 239
           H+C + FHN+N  S++L+++Y+ RI++ P    T     V  +   ++S  Q YKA+RKA
Sbjct: 340 HSCSKGFHNKNITSTFLSQRYMSRIKDDPKIKKTTLQSEVHRELGYEVSTDQCYKAKRKA 399

Query: 240 LIKINGNLLERYRRL 255
              I G   ++Y +L
Sbjct: 400 QTLIEGTYAQQYEKL 414

BLAST of Lag0018562 vs. NCBI nr
Match: XP_020417204.1 (uncharacterized protein LOC18781319 [Prunus persica])

HSP 1 Score: 142.5 bits (358), Expect = 5.0e-30
Identity = 84/245 (34.29%), Postives = 129/245 (52.65%), Query Frame = 0

Query: 17  NIEQLNGEARIYSIDWYHTSNDVS-------KDVERGEESDDGDERPTSPNLELDVHVEI 76
           N E+ + +      ++Y   ND          DV    E+  G  +    N E D+ VE 
Sbjct: 208 NYEENDNDGNNSDSEFYDEDNDAMLDDDNFYDDVVDTLETFIGCGKKQKNNWETDIQVED 267

Query: 77  EWEVESVYGSKDVLNNPHFSEGDEVDGELEFRVETDIDNIRFCVGMKFSSSKILKDAIED 136
               E  Y S ++ +  +  E        E  ++TD+DN +F VGMKF S K+LK AI+ 
Sbjct: 268 MNMDEEKYNSDELHSASNSDEEGTTRRYKELNIDTDMDNPQFDVGMKFPSKKVLKQAIQI 327

Query: 137 YALKESYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKSMISEHTCPRMFHNR 196
           Y    SY  K+ KNDK R++A   +GCKWRL+ S++   NT+QIKS   +H+C + FHN+
Sbjct: 328 YGALRSYECKVVKNDKFRLSAKCKEGCKWRLYASLMQGENTYQIKSYTPKHSCSKGFHNK 387

Query: 197 NTNSSWLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKARRKALIKINGNLLE 255
           N  S++L+++Y+ RI++ P    T     V  +   ++S  Q YKA+RKA   I G   +
Sbjct: 388 NITSTFLSQRYMSRIKDDPKIKKTTLQSEVHRELGYEVSTDQCYKAKRKAQTLIEGTYAQ 447

BLAST of Lag0018562 vs. ExPASy TrEMBL
Match: A0A6P5EAS5 (uncharacterized protein LOC109704055 OS=Ananas comosus OX=4615 GN=LOC109704055 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.3e-33
Identity = 75/156 (48.08%), Postives = 100/156 (64.10%), Query Frame = 0

Query: 99  EFRVETDIDNIRFCVGMKFSSSKILKDAIEDYALKESYNVKLKKNDKKRVTAIYSDGCKW 158
           EFR ETD+ N +F +GM F+S K  + AI +Y++K  YN+KL KN+K +V A+  +GC W
Sbjct: 307 EFRAETDMQNPQFGIGMLFASMKEFRQAIREYSIKNRYNIKLVKNEKDKVRAVCKEGCPW 366

Query: 159 RLHGSVVDANNTFQIKSMISEHTCPRMFHNRNTNSSWLAKKYIDRIRNQPDWSLTQFIET 218
            ++ S +    T Q+K   SEH C + F N+   SSWLAKKYIDR RN P W LT F E 
Sbjct: 367 LIYASWITDKKTVQVKRYDSEHKCFKNFKNKFVTSSWLAKKYIDRFRNNPKWPLTAFGEC 426

Query: 219 VKNDYQVQISRTQAYKARRKALIKINGNLLERYRRL 255
           V  D  V +SRT+ Y+A+RKAL  I G+  E+Y  L
Sbjct: 427 VTADIHVSVSRTKLYRAKRKALRLIEGSEAEQYATL 462

BLAST of Lag0018562 vs. ExPASy TrEMBL
Match: A0A5E4G990 (PREDICTED: transposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B031986 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.4e-30
Identity = 75/195 (38.46%), Postives = 114/195 (58.46%), Query Frame = 0

Query: 60  NLELDVHVEIEWEVESVYGSKDVLNNPHFSEGDEVDGELEFRVETDIDNIRFCVGMKFSS 119
           N E ++ VE     E  Y S ++ +  +  E        EF ++TD+DN +F VGMKF S
Sbjct: 28  NWETNIQVEDMNMDEKQYNSDELHSASNSYEEGTTRKYKEFNIDTDMDNPQFDVGMKFPS 87

Query: 120 SKILKDAIEDYALKESYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKSMISE 179
            K+LK AI+ Y    SY  K+ KNDK R++A   +GCKWRL+ S++   NT+QIKS   +
Sbjct: 88  KKVLKQAIQIYGALRSYECKVVKNDKFRLSAKCKEGCKWRLYASLMQGENTYQIKSYTPK 147

Query: 180 HTCPRMFHNRNTNSSWLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKARRKA 239
           H+C + FHN+N  S++L+++Y+ RI++ P    T     V  +   ++S  Q YKA+RKA
Sbjct: 148 HSCSKGFHNKNITSTFLSQRYMSRIKDDPKIKKTTLQSEVHRELGYEVSTDQCYKAKRKA 207

Query: 240 LIKINGNLLERYRRL 255
              I G   ++Y +L
Sbjct: 208 QTLIEGTYAQQYEKL 222

BLAST of Lag0018562 vs. ExPASy TrEMBL
Match: M5X0G1 (ZnF_PMZ domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa025235mg PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.4e-30
Identity = 84/245 (34.29%), Postives = 129/245 (52.65%), Query Frame = 0

Query: 17  NIEQLNGEARIYSIDWYHTSNDVS-------KDVERGEESDDGDERPTSPNLELDVHVEI 76
           N E+ + +      ++Y   ND          DV    E+  G  +    N E D+ VE 
Sbjct: 189 NYEENDNDGNNSDSEFYDEDNDAMLDDDNFYDDVVDTLETFIGCGKKQKNNWETDIQVED 248

Query: 77  EWEVESVYGSKDVLNNPHFSEGDEVDGELEFRVETDIDNIRFCVGMKFSSSKILKDAIED 136
               E  Y S ++ +  +  E        E  ++TD+DN +F VGMKF S K+LK AI+ 
Sbjct: 249 MNMDEEKYNSDELHSASNSDEEGTTRRYKELNIDTDMDNPQFDVGMKFPSKKVLKQAIQI 308

Query: 137 YALKESYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKSMISEHTCPRMFHNR 196
           Y    SY  K+ KNDK R++A   +GCKWRL+ S++   NT+QIKS   +H+C + FHN+
Sbjct: 309 YGALRSYECKVVKNDKFRLSAKCKEGCKWRLYASLMQGENTYQIKSYTPKHSCSKGFHNK 368

Query: 197 NTNSSWLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKARRKALIKINGNLLE 255
           N  S++L+++Y+ RI++ P    T     V  +   ++S  Q YKA+RKA   I G   +
Sbjct: 369 NITSTFLSQRYMSRIKDDPKIKKTTLQSEVHRELGYEVSTDQCYKAKRKAQTLIEGTYAQ 428

BLAST of Lag0018562 vs. ExPASy TrEMBL
Match: A0A251PFQ5 (ZnF_PMZ domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_4G046500 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.4e-30
Identity = 84/245 (34.29%), Postives = 129/245 (52.65%), Query Frame = 0

Query: 17  NIEQLNGEARIYSIDWYHTSNDVS-------KDVERGEESDDGDERPTSPNLELDVHVEI 76
           N E+ + +      ++Y   ND          DV    E+  G  +    N E D+ VE 
Sbjct: 208 NYEENDNDGNNSDSEFYDEDNDAMLDDDNFYDDVVDTLETFIGCGKKQKNNWETDIQVED 267

Query: 77  EWEVESVYGSKDVLNNPHFSEGDEVDGELEFRVETDIDNIRFCVGMKFSSSKILKDAIED 136
               E  Y S ++ +  +  E        E  ++TD+DN +F VGMKF S K+LK AI+ 
Sbjct: 268 MNMDEEKYNSDELHSASNSDEEGTTRRYKELNIDTDMDNPQFDVGMKFPSKKVLKQAIQI 327

Query: 137 YALKESYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKSMISEHTCPRMFHNR 196
           Y    SY  K+ KNDK R++A   +GCKWRL+ S++   NT+QIKS   +H+C + FHN+
Sbjct: 328 YGALRSYECKVVKNDKFRLSAKCKEGCKWRLYASLMQGENTYQIKSYTPKHSCSKGFHNK 387

Query: 197 NTNSSWLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKARRKALIKINGNLLE 255
           N  S++L+++Y+ RI++ P    T     V  +   ++S  Q YKA+RKA   I G   +
Sbjct: 388 NITSTFLSQRYMSRIKDDPKIKKTTLQSEVHRELGYEVSTDQCYKAKRKAQTLIEGTYAQ 447

BLAST of Lag0018562 vs. ExPASy TrEMBL
Match: A0A2N9HT52 (SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43374 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 5.4e-30
Identity = 77/199 (38.69%), Postives = 117/199 (58.79%), Query Frame = 0

Query: 56  PTSPNLELDVHVEIEWEVESVYGSKDVLNNPHFSEGDEVDGELEFRVETDIDNIRFCVGM 115
           P SP   + +    +  + S YGS D LN+P+ S+ +      +FR  TD+D+  F VGM
Sbjct: 250 PNSPYPIISIDPIDDIPIGSDYGSSDQLNSPNNSDDEPHHIYPDFRA-TDLDDPVFTVGM 309

Query: 116 KFSSSKILKDAIEDYALKESYNVKLKKNDKKRVTAIYSDGCKWRLHGSVVDANNTFQIKS 175
            F  +  LK+A+  Y LK  + ++  KN++ +V     +GC W+L     D   +FQI S
Sbjct: 310 YFRDNIELKEAVFAYRLKHGFGLRFTKNERWKVRVRCVEGCPWKLFAGRGDDGESFQINS 369

Query: 176 MISEHTCPRMFHNRNTNSSWLAKKYIDRIRNQPDWSLTQFIETVKNDYQVQISRTQAYKA 235
             S HTC R FH+R  +S W+AKKYID  R  PD  L + I  V  D++V++SR++AY+A
Sbjct: 370 FESVHTCSRAFHSRAVSSRWVAKKYIDHFRINPDMELDELIGKVMKDHEVELSRSKAYRA 429

Query: 236 RRKALIKINGNLLERYRRL 255
           ++ A + I G+ LE+YRR+
Sbjct: 430 KQYAKVLIEGSYLEQYRRV 447

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_020080379.14.8e-3348.08uncharacterized protein LOC109704055 [Ananas comosus][more]
XP_028052320.11.7e-3034.17uncharacterized protein LOC114256842 [Camellia sinensis][more]
VVA36347.12.9e-3038.46PREDICTED: transposon [Prunus dulcis][more]
XP_034229423.12.9e-3038.46uncharacterized protein LOC117638399 [Prunus dulcis][more]
XP_020417204.15.0e-3034.29uncharacterized protein LOC18781319 [Prunus persica][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6P5EAS52.3e-3348.08uncharacterized protein LOC109704055 OS=Ananas comosus OX=4615 GN=LOC109704055 P... [more]
A0A5E4G9901.4e-3038.46PREDICTED: transposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B031986 PE=4 SV=1[more]
M5X0G12.4e-3034.29ZnF_PMZ domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_... [more]
A0A251PFQ52.4e-3034.29ZnF_PMZ domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_4G046500 PE... [more]
A0A2N9HT525.4e-3038.69SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4337... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004332Transposase, MuDR, plantPFAMPF03108DBD_Tnp_Mutcoord: 109..173
e-value: 7.3E-11
score: 41.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..61
NoneNo IPR availablePANTHERPTHR31973:SF129OS01G0334000 PROTEINcoord: 61..251
NoneNo IPR availablePANTHERPTHR31973POLYPROTEIN, PUTATIVE-RELATEDcoord: 61..251

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0018562.1Lag0018562.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding