Lag0018379 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0018379
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr5: 25193550 .. 25197541 (+)
RNA-Seq ExpressionLag0018379
SyntenyLag0018379
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCCTACCCTCTCTATGGTCGGAGAGGAACTTCTGTTTGTTGGTTGGACCTCAAACAGGTTGTTCATTAGAGGAGCACTGGTACATAAGGATGAAGAGGTAGCCTAGGGGTAAAACGATAATTTGACCTAGCTGGGGTATGAACACATGTGAAGGGCTAACTTGTTGTTGATGGTCGATATCCGTGGACACAGAAATATATCTGCAGTGAGAAGAGTGCAGCTGTGGTTCTATAGTGGAGTGAACCACAGTTAACGAACATTGATTAATTTGGTTAATGAGTTTAGCCAATTAATCTCACATTGTTGGAGCTTCTGATCTGTAAGTCCATTAGGTCCCACCAGTACCTCTATAAGGGCGTTGAGGTAAATTTCTAAGGGAGAATTGAATATTCGAAGGAGTTCGAATATTAAGATAAAATATGAATTTGATTCATATTATAAAACTATAGGTTATAATTAATGCACATTAGATGTACATTAATACTATAGTTTATTTGAAGAGAGATATAATTGAATATGAGATATTTAATTATAATAATAATTAATTATTATATTAATTAAAAATTAGTTTTAATTAATTTAATTAAATTTGATTTAATTGAATTGTATTAAAATTATGGGTTAAGTGGTAATATTTGTATAAATGTGATTTATATAAGTATTAATTAAATTAATTGTTAATTTGATTAATTAATTATTAATTTTATCATTAATAATTAATTATCTTATCAGTATAACTGATAAGAAAAATCAACCCCACTAACCTAGATCTATGCGTGATTCAGAGGGTTTTTAGGGAGGGAGTTTCTCCATCCGTTAGATAACTCCCTTGTCATTCATTCAGAACGGTTCAAACTAGGAAAATCACGCATTCCCTCTCTCTCACACTCTCCAGAACTCTGTGTTATTATTCTCACAAGAATACGGAGAAGAAAATTCTTCCTAACCCTTAGAAATCACGCTCCCACAAGCCCCTAACGCACATCCTTGAAGAGAACACTGGTGCAACCTTTGGTGGTGGTATTCGTGATAACTTTCCAGCAAGAAGGATTTTTGTTGCTGGTTTTTGATGAAAAACAAGGGAATTTGGCGAAATTCAGTAAAAAACATCCACAATAGTAAGTTTTTGATCTCTTGGATCATTAGGGTCCTATTTAGATTAGATCTAAAGAGTTTATCATGTTTTTGCATGCTTTATAGAGGTTGTACAACAGCTTTAAATTTGCTTATTGTTGTGATTATTTATTCCAACGTATTGGTATTTTAATCTGAATTAAAATCTAAGAAAAGGTTCTGACCGTTTCCTCTACGAAAGGGCTTTTATCCCTTCATTCATAACATACTCAGGATTGAGATTGAGTTACCTAGGTCATCCTATTGAAATAGAAACCTAAACTAGTCAACGGTGTTACATCTAGTGGTTACTATTTCGCAGTCCGATCTTATGCAAACTCATTACACAGGATACCCCCACTCACGTGTCTCCTACATGAATGCTTTGGATCATTACATCTGTATCGAATACAAAGTGGGTTGTATCACATAATATCACCAGGATAAGGTACCAAGCCTTATCCCTATACTATAGACCATTTAGGTTGTTACTTGAACACTGATCCCCGTATGTCCTCACACACTAGTCCAAGTTTCATCTAAACAACCTATGATCTTAGTTTATTCGATTTGGGTCAAATTGTGCAATTTTAGTAACAATAACTCTTTATTGTACAAACCTCAATAACAACGTATTGAGACAAGTGAACAATTTGTCACCATTCACAATCTACGAGGTTTAGGGCATAAAACCCAACACTGTCTCTGTTTGGTCCCTGGTGCCCCTGGATGCCTCGGTTCCACTTGGTTTATCCCGAATCGCCTCCGAAAGCCTAGAAACCCTGAGGTAGGAAAAAGGTATTTAAACCATTCTTCGTCACTAAAGAGGGGATCCACAAACTCTATTCTCTGATTCTCCTCTAGCTCTTGCTCTTTGGCTTCCCATCGTGTTGCTTGCCGACTTAAGCATCGGAGGCGGTGTGGCAAGCACCACACCGATGTGCAAGTTTTACTGTCTTGCAGGTCACGTCTTCCAAATTTACCGTTGGTGGCACGTGAAGATCAGGTGAGTTCCTCCTATCCAAATTTTGCCATCAACAGTAGTATTTATTTATTTTTTCATGAATTTCTTTTACTTCGTTCATTTTTACACATTAACTGTTATTTTGCAAAACAAGGTATTTTTCTTTATGTAATTTCTATGTCATATGTCCGTATATGATAAAATATAAATGTCATTGTTAATATTTACTACTTATGGATTACTTTCGATTCTAAATTTCTTACGACATACATTATATTTAACTAATGTCTTTATCTTTTCATGTACCACGTTCATTTATTTTACCCTTACTTTTTTGCTTATTAACAATGTACATCTCATTTTTCTATTTTTATTCTTACCCATATTTTCTTGTTCATATTATAGGTATAATATATACATTGTCTATAGATATCCAAGGTTGTCTTCCTTTAAAAATAAAAAATTTAAAAAACAAAAACAAAAACAAAAAAAACAATTTTTTTTTTTTATAAATTTCATGATTAGATTCTTTTCCATTGTAAGCAAAATTGTTTTGATAGTTGTCAATTGTGGGCGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTCTGCTCGCTTAGGTTCGAATCTTGCTGCTCACATTTTTTCCCTTTTTCTTCTTTTTTTTTTTTTAATTTCATTTTCTTTTCCCTTCTGATTATTTTATTATTTTGTTTACTATTTTGACAAGGAAAATGCAATTTCTTTTTTCGTCCCCATTTTATGGGATAAAAAACATATAACCTCAATATTTTAAACTTTTCTAAAATCATATGATTTGTAATATGAATAAACTGAAAAAGCAACCAATTCAGAAGCTTTCTGAATTTCAACTAGCAAATCACTTTTTTTTGTCGGTTTAATGATTATTTTTTGTCATGATAGCACTTGAGGAGTTCTAAATTTGTTGAGGATTTGAAATGGATCGAAGAACCCATCTCGCAAATATTGATGCTATAATAATTTGGAAAAGAAATTCGCTATATTAAATTGTTGTTATAAAGTTGTACATTTAGAAATGTGCCTAGCTAGTGGAACAAGAAAGGCATGGGAGTCTTTGGGCATTGCTTGGGCCGAGTTAAGTAAAGACTGGCTACCTAGTGATTTACAACCACCCTCGCTGCACACTTTCTATATATATCTGTCTACATCCAATCAAAGACGTCCATAGCTGCTCCGCTTTCTTTTCAGAAGCGGCTTTCTCGATACGAAAGAAAAGGCCTAGCCTGCATACATATATATATAGCATTACATTAGCAGTTGCTTGCTGTTCTTCCTTCTCTGCTGCACATCTGTATTCTGCTTTATAGAGATCTTGGCTTTATGGTTTTTTGTTTGGTCAGGGGAGAAAGAGTTTTGGAAACCAAGCATGGTTTAAGCGAAAATCAATACACATTCAAGGAGTTGTACACGAGTTTGGTAAAGCATTCACCTGTCGGTTGTACATCGACCTGTCGGGAAACTCGAAACTCTCCCGCAAGCGTCCTTCTTAGGTCGGCATTTGGCTTTGGCCTTGCTTGTTCGGTTTTGGCTCATTCTTTTGATTGCCATGTCTGCTCCGTCTGCTGGTATAACATAGATGTCTTCTCTGGCAATAGCCAATCAAGAAGCCAAAGCAGGAGCCAAATTGAAGAGGGCGGGCAGCTTAGACTCTTTCCCGAAGAGAGCTCCAACCAATAGATGAGATTAAAGACGCTAACATAACAGGGGCTGGAGACATATCTTTAAGAACCCAGAACGGGATATTCGCATTAGCGGAAGGGAGGAGAGCGAAGAGATGAGCACTTTTCAAGCAGCTTTCCTTAACGAAGTCATCTATGTGACCAATGCACGCTTCAAAGAAAGCAGGGATGCTCGCTAG

mRNA sequence

ATGGGCCCTACCCTCTCTATGGTCGGAGAGGAACTTCTGTTTGTTGGTTGGACCTCAAACAGGTTGTTCATTAGAGGAGCACTGGTACATAAGGATGAAGAGCCAATTAATCTCACATTGTTGGAGCTTCTGATCTGTAAGTCCATTAGGTCCCACCAGTACCTCTATAAGGGCGTTGAGGGCATAAAACCCAACACTGTCTCTGTTTGGTCCCTGGTGCCCCTGGATGCCTCGGTTCCACTTGGTTTATCCCGAATCGCCTCCGAAAGCCTAGAAACCCTGAGCTCTTGCTCTTTGGCTTCCCATCGTGTTGCTTGCCGACTTAAGCATCGGAGGCGGTGTGGCAAGCACCACACCGATGTGCAAGTTTTACTGTCTTGCAGGTCACGTCTTCCAAATTTACCGTTGGTGGCACGTGAAGATCAGTTGCTTGCTGTTCTTCCTTCTCTGCTGCACATCTGTATTCTGCTTTATAGAGATCTTGGCTTTATGGTTTTTTGTTTGGTCAGGGGAGAAAGAGTTTTGGAAACCAAGCATGGTTTAAGCGAAAATCAATACACATTCAAGGAGTTGTACACGAGTTTGGTAAAGCATTCACCTGTCGGTTGTACATCGACCTGTCGGGAAACTCGAAACTCTCCCGCAAGCGTCCTTCTTAGGTCGGCATTTGGCTTTGGCCTTGCTTGTTCGGTTTTGGCTCATTCTTTTGATTGCCATGTCTGCTCCGTCTGCTGGGGCTGGAGACATATCTTTAAGAACCCAGAACGGGATATTCGCATTAGCGGAAGGGAGGAGAGCGAAGAGATGAGCACTTTTCAAGCAGCTTTCCTTAACGAAGTCATCTATGTGACCAATGCACGCTTCAAAGAAAGCAGGGATGCTCGCTAG

Coding sequence (CDS)

ATGGGCCCTACCCTCTCTATGGTCGGAGAGGAACTTCTGTTTGTTGGTTGGACCTCAAACAGGTTGTTCATTAGAGGAGCACTGGTACATAAGGATGAAGAGCCAATTAATCTCACATTGTTGGAGCTTCTGATCTGTAAGTCCATTAGGTCCCACCAGTACCTCTATAAGGGCGTTGAGGGCATAAAACCCAACACTGTCTCTGTTTGGTCCCTGGTGCCCCTGGATGCCTCGGTTCCACTTGGTTTATCCCGAATCGCCTCCGAAAGCCTAGAAACCCTGAGCTCTTGCTCTTTGGCTTCCCATCGTGTTGCTTGCCGACTTAAGCATCGGAGGCGGTGTGGCAAGCACCACACCGATGTGCAAGTTTTACTGTCTTGCAGGTCACGTCTTCCAAATTTACCGTTGGTGGCACGTGAAGATCAGTTGCTTGCTGTTCTTCCTTCTCTGCTGCACATCTGTATTCTGCTTTATAGAGATCTTGGCTTTATGGTTTTTTGTTTGGTCAGGGGAGAAAGAGTTTTGGAAACCAAGCATGGTTTAAGCGAAAATCAATACACATTCAAGGAGTTGTACACGAGTTTGGTAAAGCATTCACCTGTCGGTTGTACATCGACCTGTCGGGAAACTCGAAACTCTCCCGCAAGCGTCCTTCTTAGGTCGGCATTTGGCTTTGGCCTTGCTTGTTCGGTTTTGGCTCATTCTTTTGATTGCCATGTCTGCTCCGTCTGCTGGGGCTGGAGACATATCTTTAAGAACCCAGAACGGGATATTCGCATTAGCGGAAGGGAGGAGAGCGAAGAGATGAGCACTTTTCAAGCAGCTTTCCTTAACGAAGTCATCTATGTGACCAATGCACGCTTCAAAGAAAGCAGGGATGCTCGCTAG

Protein sequence

MGPTLSMVGEELLFVGWTSNRLFIRGALVHKDEEPINLTLLELLICKSIRSHQYLYKGVEGIKPNTVSVWSLVPLDASVPLGLSRIASESLETLSSCSLASHRVACRLKHRRRCGKHHTDVQVLLSCRSRLPNLPLVAREDQLLAVLPSLLHICILLYRDLGFMVFCLVRGERVLETKHGLSENQYTFKELYTSLVKHSPVGCTSTCRETRNSPASVLLRSAFGFGLACSVLAHSFDCHVCSVCWGWRHIFKNPERDIRISGREESEEMSTFQAAFLNEVIYVTNARFKESRDAR
Homology
[Close]
BLAST of Lag0018379 vs. NCBI nr
Match: XP_022138627.1 (uncharacterized protein LOC111009742 [Momordica charantia])

HSP 1 Score: 87.8 bits (216), Expect = 1.7e-13
Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = 0 

Query: 250 IFKNPERDIRISGREESEEMSTFQAAFLNEVIYVTNARFKESRDAR 296
           +FKN ERDIRISGREESEEM TFQAAFLNEVIYVTNARFKESRDAR
Sbjct: 97  LFKNQERDIRISGREESEEMXTFQAAFLNEVIYVTNARFKESRDAR 142

[Close]
BLAST of Lag0018379 vs. ExPASy TrEMBL
Match: A0A6J1CBN4 (uncharacterized protein LOC111009742 OS=Momordica charantia OX=3673 GN=LOC111009742 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 8.2e-14
Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = 0 

Query: 250 IFKNPERDIRISGREESEEMSTFQAAFLNEVIYVTNARFKESRDAR 296
           +FKN ERDIRISGREESEEM TFQAAFLNEVIYVTNARFKESRDAR
Sbjct: 97  LFKNQERDIRISGREESEEMXTFQAAFLNEVIYVTNARFKESRDAR 142

The following BLAST results are available for this feature:
BLAST of Lag0018379 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022138627.11.7e-1393.48uncharacterized protein LOC111009742 [Momordica charantia][more]
BLAST of Lag0018379 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0018379 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CBN48.2e-1493.48uncharacterized protein LOC111009742 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
BLAST of Lag0018379 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0018379.1Lag0018379.1mRNA