Lag0018370 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0018370
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrotrans_gag domain-containing protein
Locationchr5: 24839123 .. 24840107 (+)
RNA-Seq ExpressionLag0018370
SyntenyLag0018370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCCTGAGTCAAGTACCAGCCGTAGAACAGACCTGAGAAATCTGATCGAGGAAAAGCACCGGGTGGCCAAAACTGCCGAGTTTGAGGCCAGAGCTGCCGAAGTCGAGGCCAAAGCTGCCAAGGCCGAGGCCAAAGCTGCCAAGGCCGAGGCCAAAGCTGCCAAGGCCGAGGCTAAGAAAGACCATCTCCCTTGGAAGACTGAACTTCTAAACAGACTAAAGGAACATGGAAATCCTCACGGAGACTTGCAGAAGTTGAAGGATTCGGGAGGGCAAGACATGGAAGATCTAATCGACCAAGTCGATCCGCCCTTCACAGAAGAAGTCATGAAAGCCGAGGTACCCCAAAAGTTTAAGGTACCCACGTTTAAACAGTACGATGGCAAGAAAGACCCCGTGCAACATCTAAACGCATACAGAAGCTGGATGGACTTCCACGGTGTCTCAGATGCAATCAGGTGCCGCACATTCTTTTTCACTCTGACAGGATCAGCCCGGCACTGGTTTGAGAGGCTGAAAAGGAGATCCATCAGCTGTTTCAAGGAGTTGGCCCAAGCATTCCTGGCACAATTCATGGGAGCCAGAGAACAGCGCAAGCCTCACATCAACCTCTTGACAGTTAAACAGCAGCCAGGTGAGAGCTTGCGTGATTACATAACGCGTTTTAATGACGAAGCACTACAGGTTGAGGGGTACATCGAGGGAGCAGCCTTTGTAGCCATAACAGCTGGACTGGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGCTAACCTCGAACCTATGCGGAGTTTGTCTCCCGGGCACAGAAGTATATGAGTGCAGAGGAGTTACTGAAATCAAAGAGGTCAGAACGAGAGTACAAGAGTTTTTCTTCATCTAACTACGACAGTAAAAAGGACAACAGGCAGCGGGCCGACGAGGGAGGCTGAGGCCGACCAGACAATAGCCGAGGTCGACCAGACCAAGGAGGCTACTTGA

mRNA sequence

ATGAACCCTGAGTCAAGTACCAGCCGTAGAACAGACCTGAGAAATCTGATCGAGGAAAAGCACCGGGTGGCCAAAACTGCCGAGTTTGAGGCCAGAGCTGCCGAAGTCGAGGCCAAAGCTGCCAAGGCCGAGGCCAAAGCTGCCAAGGCCGAGGCCAAAGCTGCCAAGGCCGAGGCTAAGAAAGACCATCTCCCTTGGAAGACTGAACTTCTAAACAGACTAAAGGAACATGGAAATCCTCACGGAGACTTGCAGAAGTTGAAGGATTCGGGAGGGCAAGACATGGAAGATCTAATCGACCAAGTCGATCCGCCCTTCACAGAAGAAGTCATGAAAGCCGAGGTACCCCAAAAGTTTAAGGTACCCACGTTTAAACAGTACGATGGCAAGAAAGACCCCGTGCAACATCTAAACGCATACAGAAGCTGGATGGACTTCCACGGTGTCTCAGATGCAATCAGGTGCCGCACATTCTTTTTCACTCTGACAGGATCAGCCCGGCACTGGTTTGAGAGGCTGAAAAGGAGATCCATCAGCTGTTTCAAGGAGTTGGCCCAAGCATTCCTGGCACAATTCATGGGAGCCAGAGAACAGCGCAAGCCTCACATCAACCTCTTGACAGTTAAACAGCAGCCAGGTGAGAGCTTGCGTGATTACATAACGCGTTTTAATGACGAAGCACTACAGGTTGAGGGGTACATCGAGGGAGCAGCCTTTGTAGCCATAACAGCTGGACTGGAAGACGAAAGACTGCTCAATTCAATAGTAAAAAGGACAACAGGCAGCGGGCCGACGAGGGAGGCTGAGGCCGACCAGACAATAGCCGAGGTCGACCAGACCAAGGAGGCTACTTGA

Coding sequence (CDS)

ATGAACCCTGAGTCAAGTACCAGCCGTAGAACAGACCTGAGAAATCTGATCGAGGAAAAGCACCGGGTGGCCAAAACTGCCGAGTTTGAGGCCAGAGCTGCCGAAGTCGAGGCCAAAGCTGCCAAGGCCGAGGCCAAAGCTGCCAAGGCCGAGGCCAAAGCTGCCAAGGCCGAGGCTAAGAAAGACCATCTCCCTTGGAAGACTGAACTTCTAAACAGACTAAAGGAACATGGAAATCCTCACGGAGACTTGCAGAAGTTGAAGGATTCGGGAGGGCAAGACATGGAAGATCTAATCGACCAAGTCGATCCGCCCTTCACAGAAGAAGTCATGAAAGCCGAGGTACCCCAAAAGTTTAAGGTACCCACGTTTAAACAGTACGATGGCAAGAAAGACCCCGTGCAACATCTAAACGCATACAGAAGCTGGATGGACTTCCACGGTGTCTCAGATGCAATCAGGTGCCGCACATTCTTTTTCACTCTGACAGGATCAGCCCGGCACTGGTTTGAGAGGCTGAAAAGGAGATCCATCAGCTGTTTCAAGGAGTTGGCCCAAGCATTCCTGGCACAATTCATGGGAGCCAGAGAACAGCGCAAGCCTCACATCAACCTCTTGACAGTTAAACAGCAGCCAGGTGAGAGCTTGCGTGATTACATAACGCGTTTTAATGACGAAGCACTACAGGTTGAGGGGTACATCGAGGGAGCAGCCTTTGTAGCCATAACAGCTGGACTGGAAGACGAAAGACTGCTCAATTCAATAGTAAAAAGGACAACAGGCAGCGGGCCGACGAGGGAGGCTGAGGCCGACCAGACAATAGCCGAGGTCGACCAGACCAAGGAGGCTACTTGA

Protein sequence

MNPESSTSRRTDLRNLIEEKHRVAKTAEFEARAAEVEAKAAKAEAKAAKAEAKAAKAEAKKDHLPWKTELLNRLKEHGNPHGDLQKLKDSGGQDMEDLIDQVDPPFTEEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSISCFKELAQAFLAQFMGAREQRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYIEGAAFVAITAGLEDERLLNSIVKRTTGSGPTREAEADQTIAEVDQTKEAT
Homology
BLAST of Lag0018370 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 199.5 bits (506), Expect = 3.8e-47
Identity = 96/168 (57.14%), Postives = 123/168 (73.21%), Query Frame = 0

Query: 92  GQDMEDLIDQVDPPFTEEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSD 151
           G D+E+L+DQ D PFTEE+M+ +VP KFK+PT KQ+D   DPV HL+AYR WMD +GVS+
Sbjct: 166 GFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSE 225

Query: 152 AIRCRTFFFTLTGSARHWFERLKRRSISCFKELAQAFLAQFMGAREQRKPHINLLTVKQQ 211
           A+RCR F  TL GSAR WF +LKR SIS FK LA+AF+ QF+G R + +P   LLT+KQ+
Sbjct: 226 AVRCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQR 285

Query: 212 PGESLRDYITRFNDEALQVEGYIEGAAFVAITAGLEDERLLNSIVKRT 260
             ESLRDY+ RFN+E LQVEG  +  + +A  +G+ DE L  S  KRT
Sbjct: 286 TTESLRDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRT 333

BLAST of Lag0018370 vs. NCBI nr
Match: XP_022159109.1 (uncharacterized protein LOC111025548 [Momordica charantia])

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-44
Identity = 105/217 (48.39%), Postives = 138/217 (63.59%), Query Frame = 0

Query: 46  KAAKAEAKAAKAEAKKDHLPWKTE--LLNRLKEHGNPH-GDLQKLKDSGGQDMEDLIDQV 105
           K  K     A   +K DH    +E   LN+ K    P   + +  +   G D+E+L+ Q 
Sbjct: 22  KIKKQHKSLAPNGSKNDHDNRNSEPISLNKGKPIDRPESSEKRHNQKEKGFDLEELLGQA 81

Query: 106 DPPFTEEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTL 165
           D PFTEE+M+ +VP KFK+PT K +DG  +PV HL+AYR WMD +GVSDAIRCR F  TL
Sbjct: 82  DSPFTEEIMREKVPPKFKLPTVKPFDGMTEPVDHLDAYREWMDIYGVSDAIRCRVFSTTL 141

Query: 166 TGSARHWFERLKRRSISCFKELAQAFLAQFMGAREQRKPHINLLTVKQQPGESLRDYITR 225
            GSAR WF +LKR SIS FK LA+AF+ QF+G R + +P   LLT+KQ+  ESL DY+ R
Sbjct: 142 NGSARIWFRQLKRGSISSFKSLARAFMTQFVGGRCRSRPVAYLLTIKQRTAESLHDYVAR 201

Query: 226 FNDEALQVEGYIEGAAFVAITAGLEDERLLNSIVKRT 260
           FN+E LQ+EG  +  + +A  +G+ DE L  S  KRT
Sbjct: 202 FNEEKLQLEGLTDAVSLLAFMSGVRDEHLSFSFEKRT 238

BLAST of Lag0018370 vs. NCBI nr
Match: XP_022158344.1 (uncharacterized protein LOC111024851 [Momordica charantia])

HSP 1 Score: 178.7 bits (452), Expect = 7.0e-41
Identity = 83/152 (54.61%), Postives = 110/152 (72.37%), Query Frame = 0

Query: 111 MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWF 170
           MK +   KFK+P   +YDG  DP+ HL+AYR W D + + +AIRCR F FTLTGSAR+WF
Sbjct: 1   MKEKARPKFKLPAIAEYDGSADPIDHLDAYREWADIYDIREAIRCRVFSFTLTGSARNWF 60

Query: 171 ERLKRRSISCFKELAQAFLAQFMGAREQRKPHINLLTVKQQPGESLRDYITRFNDEALQV 230
            +LKR SIS FKELA+AF+ QF+G R + KP   LLT+KQ+  ESL++Y+ RFN+E LQV
Sbjct: 61  RQLKRNSISSFKELAEAFVTQFVGGRVKSKPVTYLLTIKQKATESLKEYVARFNEEKLQV 120

Query: 231 EGYIEGAAFVAITAGLEDERLLNSIVKRTTGS 263
           EG  +  A +A  +G++DERL+ S  KRT G+
Sbjct: 121 EGLTDAVALIAFVSGVKDERLVFSFGKRTPGT 152

BLAST of Lag0018370 vs. NCBI nr
Match: XP_022147761.1 (uncharacterized protein LOC111016619 [Momordica charantia])

HSP 1 Score: 173.3 bits (438), Expect = 2.9e-39
Identity = 84/173 (48.55%), Postives = 117/173 (67.63%), Query Frame = 0

Query: 111 MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWF 170
           MK +VP KFK+P  K+YDG  DP+ HL+ Y  W D +G+++AIRCR F FTLTGS R WF
Sbjct: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60

Query: 171 ERLKRRSISCFKELAQAFLAQFMGAREQRKPHINLLTVKQQPGESLRDYITRFNDEALQV 230
           ++LKR+SIS FKELA+AF+ QF G   + +P   LLT+KQ+  ESL+DY+ RFN E LQV
Sbjct: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120

Query: 231 EGYIEGAAFVAITAGLEDERLLNSIVKRTTG--SGPTREAEADQTIAEVDQTK 282
           EG  +    +   +G++DE+L+ S  KRT+G  S     A+   ++ E+  +K
Sbjct: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSK 173

BLAST of Lag0018370 vs. NCBI nr
Match: XP_022150035.1 (uncharacterized protein LOC111018307 [Momordica charantia])

HSP 1 Score: 172.9 bits (437), Expect = 3.8e-39
Identity = 83/152 (54.61%), Postives = 108/152 (71.05%), Query Frame = 0

Query: 108 EEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSAR 167
           EE+MK +VP KFK+PT KQ+DG  D V HL+AYR WMD +GVS+A++CR F  TL+GSAR
Sbjct: 2   EEIMKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIYGVSEAVKCRVFSTTLSGSAR 61

Query: 168 HWFERLKRRSISCFKELAQAFLAQFMGAREQRKPHINLLTVKQQPGESLRDYITRFNDEA 227
            WF +LKR SIS FK LA+AF+ QF+G R + +P   LLT+KQ+  ESL DY+ RFN+E 
Sbjct: 62  VWFRQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDYVARFNEEK 121

Query: 228 LQVEGYIEGAAFVAITAGLEDERLLNSIVKRT 260
           LQVEG     + +A  + + DE L  S  K+T
Sbjct: 122 LQVEGLTNAVSLMAFMSDIRDEHLSFSFGKKT 153

BLAST of Lag0018370 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.9e-47
Identity = 96/168 (57.14%), Postives = 123/168 (73.21%), Query Frame = 0

Query: 92  GQDMEDLIDQVDPPFTEEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSD 151
           G D+E+L+DQ D PFTEE+M+ +VP KFK+PT KQ+D   DPV HL+AYR WMD +GVS+
Sbjct: 166 GFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSE 225

Query: 152 AIRCRTFFFTLTGSARHWFERLKRRSISCFKELAQAFLAQFMGAREQRKPHINLLTVKQQ 211
           A+RCR F  TL GSAR WF +LKR SIS FK LA+AF+ QF+G R + +P   LLT+KQ+
Sbjct: 226 AVRCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQR 285

Query: 212 PGESLRDYITRFNDEALQVEGYIEGAAFVAITAGLEDERLLNSIVKRT 260
             ESLRDY+ RFN+E LQVEG  +  + +A  +G+ DE L  S  KRT
Sbjct: 286 TTESLRDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRT 333

BLAST of Lag0018370 vs. ExPASy TrEMBL
Match: A0A6J1E1E7 (uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025548 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 8.6e-45
Identity = 105/217 (48.39%), Postives = 138/217 (63.59%), Query Frame = 0

Query: 46  KAAKAEAKAAKAEAKKDHLPWKTE--LLNRLKEHGNPH-GDLQKLKDSGGQDMEDLIDQV 105
           K  K     A   +K DH    +E   LN+ K    P   + +  +   G D+E+L+ Q 
Sbjct: 22  KIKKQHKSLAPNGSKNDHDNRNSEPISLNKGKPIDRPESSEKRHNQKEKGFDLEELLGQA 81

Query: 106 DPPFTEEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTL 165
           D PFTEE+M+ +VP KFK+PT K +DG  +PV HL+AYR WMD +GVSDAIRCR F  TL
Sbjct: 82  DSPFTEEIMREKVPPKFKLPTVKPFDGMTEPVDHLDAYREWMDIYGVSDAIRCRVFSTTL 141

Query: 166 TGSARHWFERLKRRSISCFKELAQAFLAQFMGAREQRKPHINLLTVKQQPGESLRDYITR 225
            GSAR WF +LKR SIS FK LA+AF+ QF+G R + +P   LLT+KQ+  ESL DY+ R
Sbjct: 142 NGSARIWFRQLKRGSISSFKSLARAFMTQFVGGRCRSRPVAYLLTIKQRTAESLHDYVAR 201

Query: 226 FNDEALQVEGYIEGAAFVAITAGLEDERLLNSIVKRT 260
           FN+E LQ+EG  +  + +A  +G+ DE L  S  KRT
Sbjct: 202 FNEEKLQLEGLTDAVSLLAFMSGVRDEHLSFSFEKRT 238

BLAST of Lag0018370 vs. ExPASy TrEMBL
Match: A0A6J1DZ49 (uncharacterized protein LOC111024851 OS=Momordica charantia OX=3673 GN=LOC111024851 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.4e-41
Identity = 83/152 (54.61%), Postives = 110/152 (72.37%), Query Frame = 0

Query: 111 MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWF 170
           MK +   KFK+P   +YDG  DP+ HL+AYR W D + + +AIRCR F FTLTGSAR+WF
Sbjct: 1   MKEKARPKFKLPAIAEYDGSADPIDHLDAYREWADIYDIREAIRCRVFSFTLTGSARNWF 60

Query: 171 ERLKRRSISCFKELAQAFLAQFMGAREQRKPHINLLTVKQQPGESLRDYITRFNDEALQV 230
            +LKR SIS FKELA+AF+ QF+G R + KP   LLT+KQ+  ESL++Y+ RFN+E LQV
Sbjct: 61  RQLKRNSISSFKELAEAFVTQFVGGRVKSKPVTYLLTIKQKATESLKEYVARFNEEKLQV 120

Query: 231 EGYIEGAAFVAITAGLEDERLLNSIVKRTTGS 263
           EG  +  A +A  +G++DERL+ S  KRT G+
Sbjct: 121 EGLTDAVALIAFVSGVKDERLVFSFGKRTPGT 152

BLAST of Lag0018370 vs. ExPASy TrEMBL
Match: A0A6J1D3B7 (uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016619 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.4e-39
Identity = 84/173 (48.55%), Postives = 117/173 (67.63%), Query Frame = 0

Query: 111 MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWF 170
           MK +VP KFK+P  K+YDG  DP+ HL+ Y  W D +G+++AIRCR F FTLTGS R WF
Sbjct: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60

Query: 171 ERLKRRSISCFKELAQAFLAQFMGAREQRKPHINLLTVKQQPGESLRDYITRFNDEALQV 230
           ++LKR+SIS FKELA+AF+ QF G   + +P   LLT+KQ+  ESL+DY+ RFN E LQV
Sbjct: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120

Query: 231 EGYIEGAAFVAITAGLEDERLLNSIVKRTTG--SGPTREAEADQTIAEVDQTK 282
           EG  +    +   +G++DE+L+ S  KRT+G  S     A+   ++ E+  +K
Sbjct: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSK 173

BLAST of Lag0018370 vs. ExPASy TrEMBL
Match: A0A6J1D7D2 (uncharacterized protein LOC111018307 OS=Momordica charantia OX=3673 GN=LOC111018307 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.9e-39
Identity = 83/152 (54.61%), Postives = 108/152 (71.05%), Query Frame = 0

Query: 108 EEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSAR 167
           EE+MK +VP KFK+PT KQ+DG  D V HL+AYR WMD +GVS+A++CR F  TL+GSAR
Sbjct: 2   EEIMKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIYGVSEAVKCRVFSTTLSGSAR 61

Query: 168 HWFERLKRRSISCFKELAQAFLAQFMGAREQRKPHINLLTVKQQPGESLRDYITRFNDEA 227
            WF +LKR SIS FK LA+AF+ QF+G R + +P   LLT+KQ+  ESL DY+ RFN+E 
Sbjct: 62  VWFRQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDYVARFNEEK 121

Query: 228 LQVEGYIEGAAFVAITAGLEDERLLNSIVKRT 260
           LQVEG     + +A  + + DE L  S  K+T
Sbjct: 122 LQVEGLTNAVSLMAFMSDIRDEHLSFSFGKKT 153

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158830.13.8e-4757.14uncharacterized protein LOC111025293 [Momordica charantia][more]
XP_022159109.11.8e-4448.39uncharacterized protein LOC111025548 [Momordica charantia][more]
XP_022158344.17.0e-4154.61uncharacterized protein LOC111024851 [Momordica charantia][more]
XP_022147761.12.9e-3948.55uncharacterized protein LOC111016619 [Momordica charantia][more]
XP_022150035.13.8e-3954.61uncharacterized protein LOC111018307 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DWY01.9e-4757.14uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1E1E78.6e-4548.39uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DZ493.4e-4154.61uncharacterized protein LOC111024851 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1D3B71.4e-3948.55uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A6J1D7D21.9e-3954.61uncharacterized protein LOC111018307 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 24..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..284
NoneNo IPR availablePANTHERPTHR33223FAMILY NOT NAMEDcoord: 75..225
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 158..247
e-value: 1.8E-13
score: 50.5

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0018370.1Lag0018370.1mRNA