Lag0018183 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0018183
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr5: 18207023 .. 18209581 (+)
RNA-Seq ExpressionLag0018183
SyntenyLag0018183
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAACTCATTGCATAGGATACCCCCACTCGCATGTCTCCTACACGAACGCGTTGGATCGCAGCGTTTGTATCAAATACAAAGTGGGCCGTATCCATAGTGTCACCAGGATAAGGCACCCAGTCTTATCCCTTACTATAGACCCTTTAGGCTGTTTCTTGAACAATGATCCCATATGTCGCTACATATAGTTCAAGACTCATATTACAGCCTTGGATGTCTAGTTTATTGGATTAGGGTTATTATTAGGCAAAGACATATATAAAATAACTAATAACAATTAATGGAAAATATATCAATATTATTTCATTAATATCCGGTCAACGGTTACATTTACTATCTACGAGTTTTAGGGCATAAAACCCAACAGAGGATCCTACATCCATGAAGGACTTTCGTCCATTAGTTGTGCAATGTAATTTATAAGATCATAGCTAAGACGCTTGCCAATAGAATGAAACAGGTGCTCGACAAGATTATCTCGCCAAGCCAATCGGCTTTTGTGTCTGGCGCCTTATCACGGACAATGCCATCTTGGGTTTGAATGTATTCATGCAGTGAATAGCAGAAAAAAGGGAAAGGATGGAGTTGTGGCGCTTAAGCTTGATATGAGCAAGGCGTATGATCGAGTAGAGTGGATTTTCATTCGAAAGATAATGGCAAAATGGGGTTCAACAACCAATGGATTGAGATAACATGGCTGTGTTGAATCGGTTGAGTTCCAGGTTCTCCTCAATGGTACTCCGAGGAGTGGATTCACCCAAATCGGGACTTAGACAGGGAGACCCACTTTCCCATACTTATTCTCATTTGTGCTGAAGGTTGTCTGGACTATTGAACCAAGCTGATAATAACAGGGAGTAGACAGATTTGAGGATAAATAAATATTGTCCTTCTATAACCCATCTCTTTACGCTGATGATAGTTTGTTGTTCTTTAAAGCGTCTAATGCAGATTGCAGGACTATTCGGGACATCCTTGATATATATGCGAAAGCTTCTGGCCAAACTATTAATTTGGACAAATCTAACTTTATGGTGAGCCCTAACACAAAAGAAGAAAGCGTGACGATCATCAAGGAGCCTACAAGTCCAATTCACCAAAGCTTAGGCCAATATTTAGGCATTCCCTCGCAGAATGCTAGAAACAAGAAGGAGATCTTCAATGGCATAAAAGATCGAGTTTGGAAGGCTCTCCAAGGATGGAAAGGAAGTTTTTTTCAATTGCTGGCAAAGAAATACTTATTAAATCTATTGCCCAGGCTATTCCTAATTATGCAATGAGCTGCTTTAAGTTTCCTCTAACTCTATGTAATGAATTAAATGCCTTATGTGCTAGGTTCTGGTGGGGACAACAGATTCGGAGAAGAAAATTCATTGGTGTAGCTGGGACAAACTTTGCCACAACAAGAATTCGGAGGAATGGGCTTTCGAGAGCTATCCTTGTTCAACCAAGCCATGTTGGCAAAACAAAGCTGGAGGTTAATCAAATTTCCAAACAGCTTGCTCGCAAAGGTGCTTCGTGGATGTATTTCAAAACGGGACATTTCTTGAAACCTCTTTGGGTGCAAATCCTTCTTTTACATGGAGGAGCATCCTATGGGTCGAGACCTCTTTAAGATAGGATATAGATGGAGGATTGGAAATGGCTTAAGCGTGGATGTTTGGATGATCCTTGGATTCTGAAAGAAGGTTCCGCTAAGCCAATTCTAGTTCGTCCTGATATACGTCACCTCACTGTGGCGCATCTCAAAGACTCGAACGGGTTGTGGAAGGAGAATATTATTAGAGAGTGCTTCCTGGACACATATGCAGAGGCAATTTTAAATATGCCATCTTGTTCTACCATGGCGAGGACGAGATCATTTGGAATTACGATGCTAAAGGGAAGTTTCGGTAAAAGTGCGTACGTTAGGCTTCAATGTCAAACAGAGTGGTCAGGCTTCGTCCTCTAGCTATAAAGCTCAAGAGCGAATGTGGAAGATTGTTGGAAAATCAATCTACCTCAGAAAATTAAAATCTGTGGTTGGAGGATTTATAATGATATTCTTCCAAATTTAACTAATCTGATTAAGCGTGGATAGATGTTAATCCTTTGTGTTATCTCTGCAGGAGAAGCCTGAATGGTTGCAACATCTCTTTGGAATGCAAGTTCATGAAAGAGGTGTGCATAAGTATTTCCCTATCTCTCATTATTTGCTTCGGATGGCAGGAATAACGGATGGTGGTTGATTTTGCGAATGGACCTGGAAGCGACAGAGGGATGCACCATGGATACAAAAAGCCTAAGGATTAGTCTCATTATCCTTTGGAAGATTTGGCATTTAGGAACTCCATCAGCCACAACAAACAAATTCCCAAGCAGAGAGTTTACAACAGCAAATTGACAAAGCAATATCTGAGCTAATCGGAGAACAAGAGGAGTACCTACCTAATGCGACTGTGAACGAGCAACCCTTCAGTTTCAACAACAAGTCGGCACCCATGTCTGGATGGCTTGCGATTCCCGAAGGCCTATTGATGTGGACTTTTCCTACCGCAAGCGCACGGGTCAAGTAA

mRNA sequence

ATGCAAACTCATTGCATAGGATACCCCCACTCGCATGTCTCCTACACGAACGCGTTGGATCGCAGCGTTTGTATCAAATACAAAGTGGGCCGTGCTCGACAAGATTATCTCGCCAAGCCAATCGGCTTTTGTGTCTGGCGCCTTATCACGGACAATGCCATCTTGGGTTCTCCTCAATGGTACTCCGAGGAGTGGATTCACCCAAATCGGGACTTAGACAGGGAGACCCACTTTCCCATACTTATTCTCATTTGTGCTGAAGCGTCTAATGCAGATTGCAGGACTATTCGGGACATCCTTGATATATATGCGAAAGCTTCTGGCCAAACTATTAATTTGGACAAATCTAACTTTATGGTGAGCCCTAACACAAAAGAAGAAAGCGTGACGATCATCAAGGAGCCTACAAGTCCAATTCACCAAAGCTTAGGCCAATATTTAGGCATTCCCTCGCAGAATGCTAGAAACAAGAAGGAGATCTTCAATGGCATAAAAGATCGAGCTATTCCTAATTATGCAATGAGCTGCTTTAAGTTTCCTCTAACTCTATGTAATGAATTAAATGCCTTATGTGCTAGGTTCTGGTGGGGACAACAGATTCGGAGAAGAAAATTCATTGGTGTAGCTGGGACAAACTTTGCCACAACAAGAATTCGGAGGAATGGGCTTTCGAGAGCTATCCTTGTTCAACCAAGCCATGTTGGCAAAACAAAGCTGGAGGTTAATCAAATTTCCAAACAGCTTGCTCGCAAAGGTTCCGCTAAGCCAATTCTAGTTCGTCCTGATATACGTCACCTCACTGTGGCGCATCTCAAAGACTCGAACGGGTTGTGGAAGGAGAATATTATTAGAGAGTGCTTCCTGGACACATATGCAGAGGCAATTTTAAATATGCCATCTTGTTCTACCATGGCGAGGACGAGATCATTTGGAATTACGATGCTAAAGGGAAGTTTCGGTAAAAGTGCGAGAAGCCTGAATGGTTGCAACATCTCTTTGGAATGCAAGTTCATGAAAGAGGAACTCCATCAGCCACAACAAACAAATTCCCAAGCAGAGAGTTTACAACAGCAAATTGACAAAGCAATATCTGAGCTAATCGGAGAACAAGAGGAGTACCTACCTAATGCGACTGTGAACGAGCAACCCTTCAGTTTCAACAACAAGTCGGCACCCATGTCTGGATGGCTTGCGATTCCCGAAGGCCTATTGATGTGGACTTTTCCTACCGCAAGCGCACGGGTCAAGTAA

Coding sequence (CDS)

ATGCAAACTCATTGCATAGGATACCCCCACTCGCATGTCTCCTACACGAACGCGTTGGATCGCAGCGTTTGTATCAAATACAAAGTGGGCCGTGCTCGACAAGATTATCTCGCCAAGCCAATCGGCTTTTGTGTCTGGCGCCTTATCACGGACAATGCCATCTTGGGTTCTCCTCAATGGTACTCCGAGGAGTGGATTCACCCAAATCGGGACTTAGACAGGGAGACCCACTTTCCCATACTTATTCTCATTTGTGCTGAAGCGTCTAATGCAGATTGCAGGACTATTCGGGACATCCTTGATATATATGCGAAAGCTTCTGGCCAAACTATTAATTTGGACAAATCTAACTTTATGGTGAGCCCTAACACAAAAGAAGAAAGCGTGACGATCATCAAGGAGCCTACAAGTCCAATTCACCAAAGCTTAGGCCAATATTTAGGCATTCCCTCGCAGAATGCTAGAAACAAGAAGGAGATCTTCAATGGCATAAAAGATCGAGCTATTCCTAATTATGCAATGAGCTGCTTTAAGTTTCCTCTAACTCTATGTAATGAATTAAATGCCTTATGTGCTAGGTTCTGGTGGGGACAACAGATTCGGAGAAGAAAATTCATTGGTGTAGCTGGGACAAACTTTGCCACAACAAGAATTCGGAGGAATGGGCTTTCGAGAGCTATCCTTGTTCAACCAAGCCATGTTGGCAAAACAAAGCTGGAGGTTAATCAAATTTCCAAACAGCTTGCTCGCAAAGGTTCCGCTAAGCCAATTCTAGTTCGTCCTGATATACGTCACCTCACTGTGGCGCATCTCAAAGACTCGAACGGGTTGTGGAAGGAGAATATTATTAGAGAGTGCTTCCTGGACACATATGCAGAGGCAATTTTAAATATGCCATCTTGTTCTACCATGGCGAGGACGAGATCATTTGGAATTACGATGCTAAAGGGAAGTTTCGGTAAAAGTGCGAGAAGCCTGAATGGTTGCAACATCTCTTTGGAATGCAAGTTCATGAAAGAGGAACTCCATCAGCCACAACAAACAAATTCCCAAGCAGAGAGTTTACAACAGCAAATTGACAAAGCAATATCTGAGCTAATCGGAGAACAAGAGGAGTACCTACCTAATGCGACTGTGAACGAGCAACCCTTCAGTTTCAACAACAAGTCGGCACCCATGTCTGGATGGCTTGCGATTCCCGAAGGCCTATTGATGTGGACTTTTCCTACCGCAAGCGCACGGGTCAAGTAA

Protein sequence

MQTHCIGYPHSHVSYTNALDRSVCIKYKVGRARQDYLAKPIGFCVWRLITDNAILGSPQWYSEEWIHPNRDLDRETHFPILILICAEASNADCRTIRDILDIYAKASGQTINLDKSNFMVSPNTKEESVTIIKEPTSPIHQSLGQYLGIPSQNARNKKEIFNGIKDRAIPNYAMSCFKFPLTLCNELNALCARFWWGQQIRRRKFIGVAGTNFATTRIRRNGLSRAILVQPSHVGKTKLEVNQISKQLARKGSAKPILVRPDIRHLTVAHLKDSNGLWKENIIRECFLDTYAEAILNMPSCSTMARTRSFGITMLKGSFGKSARSLNGCNISLECKFMKEELHQPQQTNSQAESLQQQIDKAISELIGEQEEYLPNATVNEQPFSFNNKSAPMSGWLAIPEGLLMWTFPTASARVK
Homology
BLAST of Lag0018183 vs. NCBI nr
Match: XP_030479476.1 (uncharacterized protein LOC115696730 [Cannabis sativa])

HSP 1 Score: 103.6 bits (257), Expect = 4.2e-18
Identity = 59/164 (35.98%), Postives = 85/164 (51.83%), Query Frame = 0

Query: 64  EWIHPNRDLDRETH--FPILILICAEASNADCRTIRDILDIYAKASGQTINLDKSNFMVS 123
           E++ P R L + +H  F    L+  EA+N   R I+ +LDIY KASGQ +N  KS    S
Sbjct: 145 EYVQPTRGLRQVSHLLFADDSLLFCEATNNSARAIQRVLDIYHKASGQLLNTSKSVMSFS 204

Query: 124 PNTKEESVTIIKEPTS-PIHQSLGQYLGIPSQNARNKKEIFNGIKDR------------- 183
           PNT + +     +    PI +    YLG+P+ + R+KKE+F+ +K+R             
Sbjct: 205 PNTSQAAKDFFHQILGMPISECHEWYLGLPAFSERDKKEMFSDVKERIWQKLHTWNEKLF 264

Query: 184 --------------AIPNYAMSCFKFPLTLCNELNALCARFWWG 198
                         +IP YAMSCF+ P T CN+L ++ A FWWG
Sbjct: 265 SVGGKEVLLKAVVQSIPTYAMSCFRLPSTFCNQLESMMANFWWG 308

BLAST of Lag0018183 vs. NCBI nr
Match: XP_030477990.1 (uncharacterized protein LOC115695032 [Cannabis sativa])

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-17
Identity = 57/153 (37.25%), Postives = 79/153 (51.63%), Query Frame = 0

Query: 83  LICAEASNADCRTIRDILDIYAKASGQTINLDKSNFMVSPNTKEESV----TIIKEPTSP 142
           L+  EA +  C  I+ +LD Y KASGQ +N DKS    SPNT E S      I+  P   
Sbjct: 314 LLFCEADDRSCGAIKRVLDTYHKASGQQLNTDKSVMSFSPNTSEASKQSFRNILGMPICE 373

Query: 143 IHQSLGQYLGIPSQNARNKKEIFNGIKDR---------------------------AIPN 202
            H+S   YLG+P+ + R+KK++FN IK+R                           +IP 
Sbjct: 374 CHES---YLGLPAYSERDKKQLFNQIKERIWKLLNAWTDKIFSVGGKEVLLKAVIQSIPT 433

Query: 203 YAMSCFKFPLTLCNELNALCARFWWGQQIRRRK 205
           YAMSCFK P+  C+E+ +L + FWWG    ++K
Sbjct: 434 YAMSCFKLPVKFCHEIESLMSNFWWGSTSDKKK 463

BLAST of Lag0018183 vs. NCBI nr
Match: XP_034219069.1 (uncharacterized protein LOC117630466 [Prunus dulcis])

HSP 1 Score: 100.1 bits (248), Expect = 4.6e-17
Identity = 75/224 (33.48%), Postives = 102/224 (45.54%), Query Frame = 0

Query: 36  YLAKPIGFCVWRLITDNAILGSPQWYSEEWIHPNRDLDRETHFPILILICAEASNADCRT 95
           YL   +   +  +I+ N+ LG  Q     ++H    +     F    +    A+N +C  
Sbjct: 428 YLFLLVSEALSNMISYNSSLGQLQGI---YLHNRCPMLTHLFFADDSIFFLAATNHNCVV 487

Query: 96  IRDILDIYAKASGQTINLDKSNFMVSPNT----KEESVTI--IKEPTSPIHQSLGQYLGI 155
           + +IL  Y  ASGQ INLDKSN   SPNT    +++   I  IKE  +P     G YLG+
Sbjct: 488 MEEILFDYCLASGQLINLDKSNIFFSPNTPLWVRKDLCWIFGIKEADNP-----GNYLGL 547

Query: 156 PSQNARNKKEIFNGIKDR---------------------------AIPNYAMSCFKFPLT 215
           P+   R+KKE  N IK+R                           AIP+Y MSCFK P+T
Sbjct: 548 PTIWGRSKKEALNYIKERILGKVQGWKQKHLSQAGKETLIKAVLFAIPSYPMSCFKLPIT 607

Query: 216 LCNELNALCARFWWGQQIRRRKFIGVAGTNFATTRIRRNGLSRA 227
           LC E+++L A FWWG          V G      R    GLS+A
Sbjct: 608 LCREIDSLIANFWWGNN-------SVGGNKIHWKRWELMGLSKA 636

BLAST of Lag0018183 vs. NCBI nr
Match: XP_023902041.1 (uncharacterized protein LOC112013897 [Quercus suber])

HSP 1 Score: 100.1 bits (248), Expect = 4.6e-17
Identity = 82/276 (29.71%), Postives = 120/276 (43.48%), Query Frame = 0

Query: 83  LICAEASNADCRTIRDILDIYAKASGQTINLDKSNFMVSPNTKEESVTIIKEPTSPIHQS 142
           L+  +A++ +C+T+ DIL +Y  ASGQ IN+DKS+   S NT +E    +      +  +
Sbjct: 342 LLFCKANSQECQTLIDILQLYEDASGQKINVDKSSVFFSNNTPDEKRCEVLRMLGHMQDT 401

Query: 143 L-GQYLGIPSQNARNKKEIFNGIKDR---------------------------AIPNYAM 202
              +YLG+PS   ++K EIF  +K+R                           AIP Y M
Sbjct: 402 RHKKYLGLPSIIGKSKVEIFAEVKERVERKLSGWKEKLLSAGGREILIKAVAQAIPTYTM 461

Query: 203 SCFKFPLTLCNELNALCARFWWGQQIRRRK------FIGVAGTNFATTRIRRNGLSRAIL 262
           SCF+ P TLC E+ A+  RFWWGQ+ +  K      F G+      T    R G    IL
Sbjct: 462 SCFQIPKTLCEEIEAMMRRFWWGQRGQESKIAWRSIFNGLEVVRRGTR--WRVGNGERIL 521

Query: 263 VQPSHVGKTKLEVNQISKQLARKGSAKPILVRPDIRHLTVAHLKDSNGLWKENIIRECFL 322
           +       T +    IS         KP    P +  L     K     W+++++R  FL
Sbjct: 522 IWEDKWLPTPITYKVIS-------PPKPFDDYPRVSALIDRERK----RWRDDVVRALFL 581

Query: 323 DTYAEAILNMPSCSTMARTRSFGITMLKGSFG-KSA 324
              A  IL++P        +   +   KG F  KSA
Sbjct: 582 PFEARTILSIPLSHNFPEDQIIWVGNRKGEFSVKSA 604

BLAST of Lag0018183 vs. NCBI nr
Match: OMO99000.1 (reverse transcriptase [Corchorus capsularis])

HSP 1 Score: 99.4 bits (246), Expect = 7.9e-17
Identity = 82/272 (30.15%), Postives = 119/272 (43.75%), Query Frame = 0

Query: 87   EASNADCRTIRDILDIYAKASGQTINLDKSNFMVSPNTKEESVTIIKEPTSPIHQS-LGQ 146
            +A++A+   +RD L IY + SGQ IN DKS    S NT +     I+E      QS + +
Sbjct: 919  KANSAESEKVRDYLKIYEECSGQKINFDKSVVFFSSNTLQADRDRIREFFGVGEQSIIEK 978

Query: 147  YLGIPSQNARNKKEIFNGIKDR---------------------------AIPNYAMSCFK 206
            YLG+P+   RNKK  FN IK+R                           +IP YAM  F 
Sbjct: 979  YLGLPTLVGRNKKSTFNWIKERIAKKIGSWNMRWLSQGGREVMIKSVLQSIPTYAMQVFS 1038

Query: 207  FPLTLCNELNALCARFWWGQQIRRRKFIGVA------GTNFATTRIRR----NGLSRAIL 266
            FP TLCNE++ + ARFWW QQI +R    VA        +F     R     + L   + 
Sbjct: 1039 FPQTLCNEIDGMIARFWWKQQIDKRPIYWVAWSKLCRAKDFGGLGFRNMEWTSFLDAKVG 1098

Query: 267  VQPSHVGKTKLEVNQISK--QLARKGSAKPILVRPD---------IRH----------LT 300
              PS   ++ L+  ++ +     R G  + + V  D         I H          L 
Sbjct: 1099 WTPSFTWRSILKGRELLQFGLRWRIGDGRNVRVLRDKWVANLDDFIPHSGNGKIPEDMLV 1158

BLAST of Lag0018183 vs. ExPASy TrEMBL
Match: A0A2N9J6K4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59981 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.1e-19
Identity = 77/224 (34.38%), Postives = 103/224 (45.98%), Query Frame = 0

Query: 31  RARQDYLAK---PIGF----------CVWRLITDNAILGSPQWYSEEWIHPNRDLDR-ET 90
           R   DYL K    +GF          CV  +     + G P+ Y    + P+R L + + 
Sbjct: 466 RVEWDYLKKMMLKLGFTARWVALIMECVTSVSYSILVNGEPKGY----VKPSRGLRQGDP 525

Query: 91  HFPILILICAE-------ASNADCRTIRDILDIYAKASGQTINLDKSNFMVSPNTKEESV 150
             P L LICAE       A++ +C+ ++DIL +Y  ASGQ IN  K+    S N      
Sbjct: 526 LSPYLFLICAEGLTAFIAATDTECQALQDILTLYESASGQKINTAKTALFFSQNASPIVK 585

Query: 151 TIIKE--PTSPIHQSLGQYLGIPSQNARNKKEIFNGIKDR-------------------- 205
             I     TSP  Q   +YLG+P    R+KK+ F+ IKDR                    
Sbjct: 586 ASILNFFGTSPTTQ-FEKYLGLPPVIGRSKKQAFSEIKDRIWRRLQGWKEKNLSQAGKAV 645

BLAST of Lag0018183 vs. ExPASy TrEMBL
Match: A0A2N9J5D9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59443 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.1e-19
Identity = 78/225 (34.67%), Postives = 102/225 (45.33%), Query Frame = 0

Query: 31   RARQDYLAK---PIGF----------CVWRLITDNAILGSPQWYSEEWIHPNRDLDR-ET 90
            R   DYL K    +GF          CV  +     + G P+ Y    + P+R L + + 
Sbjct: 934  RVEWDYLKKMMLKLGFTARWVALIMECVTSVSYSILVNGEPKGY----VKPSRGLRQGDP 993

Query: 91   HFPILILICAE--------ASNADCRTIRDILDIYAKASGQTINLDKSNFMVSPNTKEES 150
              P L LICAE        A+N +C+ ++DIL +Y  ASGQ IN  K+    S N     
Sbjct: 994  LSPYLFLICAEDDSLIFCRATNTECQALQDILTLYESASGQKINTAKTALFFSQNASPIV 1053

Query: 151  VTIIKE--PTSPIHQSLGQYLGIPSQNARNKKEIFNGIKDR------------------- 205
               I     TSP  Q   +YLG+P    R+KK+ F  IKDR                   
Sbjct: 1054 KASILNFFGTSPTTQ-FEKYLGLPPVIGRSKKQAFFEIKDRIWRRLQGWKEKNLSQAGKA 1113

BLAST of Lag0018183 vs. ExPASy TrEMBL
Match: A0A2N9I6M1 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47940 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-18
Identity = 70/197 (35.53%), Postives = 97/197 (49.24%), Query Frame = 0

Query: 65   WIHPNRDLDR-ETHFPILILICAE--------ASNADCRTIRDILDIYAKASGQTINLDK 124
            +I P R L + +   P L L+CAE        A+  +C  +  IL+IY  ASGQ IN  K
Sbjct: 807  FIRPERGLRQGDPLSPYLFLVCAEDDSIIFCNATIGECEALLQILNIYELASGQKINSGK 866

Query: 125  SNFMVSPNTKEESVTIIKE--PTSPIHQSLGQYLGIPSQNARNKKEIFNGIKDR------ 184
            +    S NT+ E   +I +   T+P  Q   +YLG+P    ++KK  FNG+KDR      
Sbjct: 867  TALFFSHNTQHECRHLIMDLFGTTPTTQ-FEKYLGLPPVIGKSKKSAFNGVKDRVGRRLQ 926

Query: 185  ---------------------AIPNYAMSCFKFPLTLCNELNALCARFWWGQQIRRRKFI 224
                                 AIP YAMSCFKFP  LC+E++++  RFWWGQ+   RK +
Sbjct: 927  GWKEKLLSQAGREVLIKAVIQAIPTYAMSCFKFPKGLCSEISSMATRFWWGQRGLERK-V 986

BLAST of Lag0018183 vs. ExPASy TrEMBL
Match: A0A2N9GJ35 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27322 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.5e-18
Identity = 61/151 (40.40%), Postives = 79/151 (52.32%), Query Frame = 0

Query: 83   LICAEASNADCRTIRDILDIYAKASGQTINLDKSNFMVSPNTKEESVTIIKE--PTSPIH 142
            ++   A+NADC T++++L  YA ASGQ +N DK+    SPNT ++S   I     TSP  
Sbjct: 1028 IVFCRATNADCVTLQNLLTKYAHASGQVVNSDKTALFFSPNTPQQSRNAICSFFDTSPAT 1087

Query: 143  QSLGQYLGIPSQNARNKKEIFNGIKDR---------------------------AIPNYA 202
            Q   +YLG+P    R K+  FN IKDR                           AIPNYA
Sbjct: 1088 Q-FEKYLGLPPMVGRAKRRAFNEIKDRVWRRLQGWKEKLLSQAGREVLIKAVIQAIPNYA 1147

Query: 203  MSCFKFPLTLCNELNALCARFWWGQQIRRRK 205
            MSCFK P   C+EL ++  RFWWGQ+   RK
Sbjct: 1148 MSCFKLPAGFCDELCSMDNRFWWGQKKGERK 1177

BLAST of Lag0018183 vs. ExPASy TrEMBL
Match: A0A2N9EMD0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7908 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.9e-18
Identity = 70/203 (34.48%), Postives = 93/203 (45.81%), Query Frame = 0

Query: 44  CVWRLITDNAILGSPQWYSEEWIHPNRDLDR-ETHFPILILICAE--------ASNADCR 103
           C+  +     + G P  Y    I P+R L + +   P L L+CAE        A+   C 
Sbjct: 366 CISTVSYSILVNGEPHGY----IQPSRGLRQGDPLSPYLFLLCAEDDSLLFSKATANACE 425

Query: 104 TIRDILDIYAKASGQTINLDKSNFMVSPNTKEESVTIIKEPTS-PIHQSLGQYLGIPSQN 163
            I+ IL  Y  ASGQ +N DK+    S +T E S  +IKE    PI +   +YLG+PS  
Sbjct: 426 KIQGILAQYENASGQQVNRDKTTIYFSKHTPEASQHVIKEALGVPIIRQYEKYLGLPSLV 485

Query: 164 ARNKKEIFNGIKDR---------------------------AIPNYAMSCFKFPLTLCNE 210
            RN+ E F  IK+R                           AIP Y+MSCF+ P  LC+E
Sbjct: 486 GRNRTESFTKIKERVWQKLKGWKEKLLSQAGREILIKAVAQAIPTYSMSCFRLPAKLCSE 545

BLAST of Lag0018183 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 43.9 bits (102), Expect = 3.7e-04
Identity = 20/56 (35.71%), Postives = 27/56 (48.21%), Query Frame = 0

Query: 168 AIPNYAMSCFKFPLTLCNELNALCARFWWGQQIRRRKFIGVAGTNFATTRIRRNGL 224
           A+P YAMSCF+    LC +L +    FWW     +RK   VA      ++    GL
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGL 57

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_030479476.14.2e-1835.98uncharacterized protein LOC115696730 [Cannabis sativa][more]
XP_030477990.11.6e-1737.25uncharacterized protein LOC115695032 [Cannabis sativa][more]
XP_034219069.14.6e-1733.48uncharacterized protein LOC117630466 [Prunus dulcis][more]
XP_023902041.14.6e-1729.71uncharacterized protein LOC112013897 [Quercus suber][more]
OMO99000.17.9e-1730.15reverse transcriptase [Corchorus capsularis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9J6K49.1e-1934.38Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9J5D99.1e-1934.67CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5944... [more]
A0A2N9I6M12.7e-1835.53CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4794... [more]
A0A2N9GJ353.5e-1840.40Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27322 PE=3 SV=1[more]
A0A2N9EMD05.9e-1834.48Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7908 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
ATMG00310.13.7e-0435.71RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 352..372
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 84..222
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 84..222

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0018183.1Lag0018183.1mRNA