Lag0018145 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0018145
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr5: 17480009 .. 17480680 (+)
RNA-Seq Expression	Lag0018145
Synteny	Lag0018145

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCGAATACGCACACCGAGCTAGAGTACGTAGATTGGAGGAGCGGATTGTGCGTCTCGAAGAACGAGTTGGCGTTGAGGGAGGCTCGTTCCGAAGCGAGCTTTTGAGTCCAGATTGGGAGGACTTCCCAGCTTTGGAGCCTGACATCTTGGACATTATTCGAGGTTACCACGACCGCGTAGCCAACATGGAGAATGCGGTAAAAGGGCTTTCAGATAACATGCAGAGCTACATCTTGGCCGCAAATCAAACATTAATAGATTTGCAAGCAACGACCAAGAAGGGTCTCGACACCCTGCAACACGACCTAAATCAACTTAGGTTAGAGATCGATGAAATCAGATCGAGCGTCGAGGAACATCCAATGTACCCACCAAGAGAAGTACGCGATGTCTTACGACAGGCAGACCGGTGGTTGAACGGGGGCCTCCCCGACATTCCTGAGGAGGAGGAGGAGGCACGACAACCCTGGGAAGTGATAATGATCAACAGCGACTCAGAATCAAAAGGAGAAGCCTTCAATGATGACTCGTGCCAAATAGATATGGACGAGTGTCGCTACTGCGAGATTACGCATGACGTAGACGATTGCCTAGGCAAAGATCCCCCGCTACTCGGACCCCGGGGGATCTTCCAATTTCTGGCCTTGACGAATTCAAGGCAGGGTTGA

mRNA sequence

ATGACCGAATACGCACACCGAGCTAGAGTACGTAGATTGGAGGAGCGGATTGTGCGTCTCGAAGAACGAGTTGGCGTTGAGGGAGGCTCGTTCCGAAGCGAGCTTTTGAGTCCAGATTGGGAGGACTTCCCAGCTTTGGAGCCTGACATCTTGGACATTATTCGAGGTTACCACGACCGCGTAGCCAACATGGAGAATGCGGTAAAAGGGCTTTCAGATAACATGCAGAGCTACATCTTGGCCGCAAATCAAACATTAATAGATTTGCAAGCAACGACCAAGAAGGGTCTCGACACCCTGCAACACGACCTAAATCAACTTAGGTTAGAGATCGATGAAATCAGATCGAGCGTCGAGGAACATCCAATGTACCCACCAAGAGAAGTACGCGATGTCTTACGACAGGCAGACCGGTGGTTGAACGGGGGCCTCCCCGACATTCCTGAGGAGGAGGAGGAGGCACGACAACCCTGGGAAGTGATAATGATCAACAGCGACTCAGAATCAAAAGGAGAAGCCTTCAATGATGACTCGTGCCAAATAGATATGGACGAGTGTCGCTACTGCGAGATTACGCATGACGTAGACGATTGCCTAGGCAAAGATCCCCCGCTACTCGGACCCCGGGGGATCTTCCAATTTCTGGCCTTGACGAATTCAAGGCAGGGTTGA

Coding sequence (CDS)

ATGACCGAATACGCACACCGAGCTAGAGTACGTAGATTGGAGGAGCGGATTGTGCGTCTCGAAGAACGAGTTGGCGTTGAGGGAGGCTCGTTCCGAAGCGAGCTTTTGAGTCCAGATTGGGAGGACTTCCCAGCTTTGGAGCCTGACATCTTGGACATTATTCGAGGTTACCACGACCGCGTAGCCAACATGGAGAATGCGGTAAAAGGGCTTTCAGATAACATGCAGAGCTACATCTTGGCCGCAAATCAAACATTAATAGATTTGCAAGCAACGACCAAGAAGGGTCTCGACACCCTGCAACACGACCTAAATCAACTTAGGTTAGAGATCGATGAAATCAGATCGAGCGTCGAGGAACATCCAATGTACCCACCAAGAGAAGTACGCGATGTCTTACGACAGGCAGACCGGTGGTTGAACGGGGGCCTCCCCGACATTCCTGAGGAGGAGGAGGAGGCACGACAACCCTGGGAAGTGATAATGATCAACAGCGACTCAGAATCAAAAGGAGAAGCCTTCAATGATGACTCGTGCCAAATAGATATGGACGAGTGTCGCTACTGCGAGATTACGCATGACGTAGACGATTGCCTAGGCAAAGATCCCCCGCTACTCGGACCCCGGGGGATCTTCCAATTTCTGGCCTTGACGAATTCAAGGCAGGGTTGA

Protein sequence

MTEYAHRARVRRLEERIVRLEERVGVEGGSFRSELLSPDWEDFPALEPDILDIIRGYHDRVANMENAVKGLSDNMQSYILAANQTLIDLQATTKKGLDTLQHDLNQLRLEIDEIRSSVEEHPMYPPREVRDVLRQADRWLNGGLPDIPEEEEEARQPWEVIMINSDSESKGEAFNDDSCQIDMDECRYCEITHDVDDCLGKDPPLLGPRGIFQFLALTNSRQG

Homology

The following BLAST results are available for this feature:

BLAST of Lag0018145 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0018145 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0018145 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0018145 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 97..117
None	No IPR available	COILS	Coil	Coil	coord: 3..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0018145.1	Lag0018145.1	mRNA