Lag0018094 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGTGCTCAAGGATACACCAGAAGAAACACATACACCAACAACACCAACAGATCAAGACGTCAACACAACTATAATCCTCAATTTGAGACATGATACTCCAATTTTGCAAGTGAACCAAGGCATATTTGAGACCAATGAAACTGATATATCAAAATTGGGCAAAGACTTCACTCTCTTGGAAAATCAAGTTCATTACCAGGATGGAACATATGCTCATGACGATTCCATGACCATGACACCTACGCTCATAACTCCTAATGAAGCAGCTAAGTTATCTGATATTAGTAAAAATCTTCATATTGACTTGCCCACTTTGATTGCAGGAACTATACCAAAGCAAGGAGTATTGGCACAAGTCAATGGTTTTAGCTCTCACCACATGGTCACAACAAGCAAGTTAGCAAAGAATCTGGTCCTTGATCCCACTCTTGCACATCAAATTAGCAAACTCAAAAACTCAAGACAACAAAGAACACTAATAGCAATGAGTCACAAATCTGAGCCACAAAACTACAAAATGGCCCTATCTTTGCCTCATTGGAAGGATGCCATGGATGAAGAAATGAAGGCTTTAATGTTGAATAACACATGGATCCTAGTTCAAAGACCACAAGATACAAATGTAGTAGAGTCAAAGTCGATCTTCAAGATAAAGTGCAAGGAAGATGGAACGATTAATCGCTACAAGGCTAGACTTGTAGCTCAAGGATACACACAAATTGAGGGTCTTAACTATGAAGAAACTTATAGCCCAGTAAATCAAACCAACAACAATCAGGTTAATTCTATCCTTAGCTACTAGTGCAGGATGGTCCCTAAGACAACTAGATGTTAAAAATGCTTTCTTGCATGGTCATTTGAAGGAACAACTAAGTTATCTGATATTAGTAAAAATCTTCATATTGACTTGCCCACTTTGATTGCAGGAACTATACCAAAGCAAGGAGTATTGGCACAAGTCAATGATATTAGCTCTCACCACATGGTCACAAGAAGCAAGTTATTAGCAAAGAATCCAGTCCTTGATCCCACTCTTGCACATGAAATTAGCAAACTCAAAAACTCAAGACAACAAAGAACACTTATAGCAATGAGTCACAAATATGAGCCAAAAAACTACAAAATGGCCCTATCTTTTCCTCATTGGAAGGATGCCATGGAGGAAGAAATGAAGGCTTTAATGTTGAACAACACATGGATCCTAGTTCAAAGACCACAAGATACAAATGTAGTAGAGTCAAAGTGGATCTTCAAGACAAAGTGCAAGGGAGATGGAACGATTAATCGCTACAAGGCTAGACTTGTAGCTCAAGGATACACACAAATTGAGGGTCTTAACTATGAAGAAACTTATAGCCCAGTAAATCAAACCAACAACAATCAGGTTAATTTATCCTTAGCTAATAGTGCAGGATGGTCCCTAAGACAACTAGATGTTAAAAATGTTTCTTGCATGGTCATTTGAAGGAACAAGTCTTTATGGAACAACCTCTAGGTTTATTAATCCTCACCATCCAAACTATGTTTGTAAGCTTCAAAAGTCCATCTATGGCCTCAAACAGGCCCCACGAGCATGGCTTGATAGACTAGCTAATTTTCTCCTCCATATTGGTTTTAACAGTTCTCATTCTGACCCATCTCTTTTTATATTTAGAGACAAATCTATTTAACACTAATGCTTAATTACGTTGATGAAATTATATTGACAGGAAACAACTCATCACATATCCAACAACTCATAGGAACACTACGTTCACAATTTTGCCTTGAAAGACTTGGACAACTTACACTATTTCTTAGCATAGAAGTGAAGCACACTGCAAAAGGAATTATGCTATCACAAGGAAAATATGCTCGTGAAATACTCACCAAGTCAGGAATGTTGGGAGTTGCTGCCATTAATACTCCAATCATGACCTCACCTCAAGATACCCATAAGGACACTCAACCCACTGATGCAAAGGAATACAGGAGCATCGTTGGATTGTTGCAATACCTTACACTCACACGACCTGATATAGTATATGCAGTTAATTGTGTATGCCAACACCTACAACAGCCCATCGTTAAGGATCTCAAAGCTGTGAAAAGGATTCTTCGATACATACAAGGAACCCTCGACTACGATATCTCTCTTTATAAAAACAATTCACTAAATTTATATGCTTTTTGTGATGCAGATTGGGGTGGCTGCCCTCTTACACGAAGTACTACAGGCTTTTGTGTATTCCTCAGATCCAATTGTATCTCATCACTACAAGAATCTCGGGATTCGTCGACGCAAACAGACGTCGGCAAATCCCTCTTTTGCGTCGGCAAAAAGGAAACGACGATGCAATCATGCGTCGGCTTAAATGTCGCTAAATCCTTGTTGGCATCCAAAAAACTGACGAAAATGGCGGTTCGTGGGCAGAAAGGTACATTTTCGCCAACGCAAACTCTTGCGTTGCCTAAACCTGTAATAACCGATGCAACATGCGTCGGTTATAATACGGTTTCATTTATCAGATTTTTGAGTTTAGCCCACGCAAGAAGCGTCGGTGAAAGTCATAAATTGCGTCGGCTACAATACGACTTCATTCCACAGATTTTCGAGATGAGGCCACGAAATTGCGTCGGTGAAAATAAAAATTGCGTCGGCTAA ATGGTTGTGCTCAAGGATACACCAGAAGAAACACATACACCAACAACACCAACAGATCAAGACGTCAACACAACTATAATCCTCAATTTGAGACATGATACTCCAATTTTGCAAGTGAACCAAGGCATATTTGAGACCAATGAAACTGATATATCAAAATTGGGCAAAGACTTCACTCTCTTGGAAAATCAAGTTCATTACCAGGATGGAACATATGCTCATGACGATTCCATGACCATGACACCTACGCTCATAACTCCTAATGAAGCAGCTAAGTTATCTGATATTAGTAAAAATCTTCATATTGACTTGCCCACTTTGATTGCAGGAACTATACCAAAGCAAGGAGTATTGGCACAAGTCAATGGTTTTAGCTCTCACCACATGGTCACAACAAGCAAGTTAGCAAAGAATCTGGTCCTTGATCCCACTCTTGCACATCAAATTAGCAAACTCAAAAACTCAAGACAACAAAGAACACTAATAGCAATGAGTCACAAATCTGAGCCACAAAACTACAAAATGGCCCTATCTTTGCCTCATTGGAAGGATGCCATGGATGAAGAAATGAAGGCTTTAATGTTGAATAACACATGGATCCTAGTTCAAAGACCACAAGATACAAATGTAGTAGAGTCAAAGTCGATCTTCAAGATAAAGTGCAAGGAAGATGGAACGATTAATCGCTACAAGGCTAGACTTGTAGCTCAAGGATACACACAAATTGAGGGTCTTAACTATGAAGAAACTTATAGCCCAGTAAATCAAACCAACAACAATCAGTTATCTGATATTAGTAAAAATCTTCATATTGACTTGCCCACTTTGATTGCAGGAACTATACCAAAGCAAGGAGTATTGGCACAAGTCAATGATATTAGCTCTCACCACATGGTCACAAGAAGCAAGTTATTAGCAAAGAATCCAGTCCTTGATCCCACTCTTGCACATGAAATTAGCAAACTCAAAAACTCAAGACAACAAAGAACACTTATAGCAATGAGTCACAAATATGAGCCAAAAAACTACAAAATGGCCCTATCTTTTCCTCATTGGAAGGATGCCATGGAGGAAGAAATGAAGGCTTTAATGTTGAACAACACATGGATCCTAGTTCAAAGACCACAAGATACAAATGTAGTAGAGTCAAAGTGGATCTTCAAGACAAAGTGCAAGGGAGATGGAACGATTAATCGCTACAAGGCTAGACTTGTAGCTCAAGGATACACACAAATTGAGGGTCTTAACTATGAAGAAACTTATAGCCCAGTAAATCAAACCAACAACAATCAGAGACAAATCTATTTAACACTAATGCTTAATTACGTTGATGAAATTATATTGACAGGAAACAACTCATCACATATCCAACAACTCATAGGAACACTACGTTCACAATTTTGCCTTGAAAGACTTGGACAACTTACACTATTTCTTAGCATAGAAGTGAAGCACACTGCAAAAGGAATTATGCTATCACAAGGAAAATATGCTCGTGAAATACTCACCAAGTCAGGAATGTTGGGAGTTGCTGCCATTAATACTCCAATCATGACCTCACCTCAAGATACCCATAAGGACACTCAACCCACTGATGCAAAGGAATACAGGAGCATCGTTGGATTGTTGCAATACCTTACACTCACACGACCTGATATAGTATATGCAGTTAATTGTGTATGCCAACACCTACAACAGCCCATCGTTAAGGATCTCAAAGCTGTGAAAAGGATTCTTCGATACATACAAGGAACCCTCGACTACGATATCTCTCTTTATAAAAACAATTCACTAAATTTATATGCTTTTTGTGATGCAGATTGGGGTGGCTGCCCTCTTACACGAAGTACTACAGGCTTTTGTGTATTCCTCAGATCCAATTGTATCTCATCACTACAAGAATCTCGGGATTCGTCGACGCAAACAGACGTCGGCAAATCCCTCTTTTGCGTCGGCAAAAAGGAAACGACGATGCAATCATGCGTCGGCTTAAATGTCGCTAAATCCTTGTTGGCATCCAAAAAACTGACGAAAATGGCGGTTCGTGGGCAGAAAGGTACATTTTCGCCAACGCAAACTCTTGCGTTGCCTAAACCTGTAATAACCGATGCAACATGCGTCGGTTATAATACGGTTTCATTTATCAGATTTTTGAGTTTAGCCCACGCAAGAAGCGTCGGTGAAAGTCATAAATTGCGTCGGCTACAATACGACTTCATTCCACAGATTTTCGAGATGAGGCCACGAAATTGCGTCGGTGAAAATAAAAATTGCGTCGGCTAA ATGGTTGTGCTCAAGGATACACCAGAAGAAACACATACACCAACAACACCAACAGATCAAGACGTCAACACAACTATAATCCTCAATTTGAGACATGATACTCCAATTTTGCAAGTGAACCAAGGCATATTTGAGACCAATGAAACTGATATATCAAAATTGGGCAAAGACTTCACTCTCTTGGAAAATCAAGTTCATTACCAGGATGGAACATATGCTCATGACGATTCCATGACCATGACACCTACGCTCATAACTCCTAATGAAGCAGCTAAGTTATCTGATATTAGTAAAAATCTTCATATTGACTTGCCCACTTTGATTGCAGGAACTATACCAAAGCAAGGAGTATTGGCACAAGTCAATGGTTTTAGCTCTCACCACATGGTCACAACAAGCAAGTTAGCAAAGAATCTGGTCCTTGATCCCACTCTTGCACATCAAATTAGCAAACTCAAAAACTCAAGACAACAAAGAACACTAATAGCAATGAGTCACAAATCTGAGCCACAAAACTACAAAATGGCCCTATCTTTGCCTCATTGGAAGGATGCCATGGATGAAGAAATGAAGGCTTTAATGTTGAATAACACATGGATCCTAGTTCAAAGACCACAAGATACAAATGTAGTAGAGTCAAAGTCGATCTTCAAGATAAAGTGCAAGGAAGATGGAACGATTAATCGCTACAAGGCTAGACTTGTAGCTCAAGGATACACACAAATTGAGGGTCTTAACTATGAAGAAACTTATAGCCCAGTAAATCAAACCAACAACAATCAGTTATCTGATATTAGTAAAAATCTTCATATTGACTTGCCCACTTTGATTGCAGGAACTATACCAAAGCAAGGAGTATTGGCACAAGTCAATGATATTAGCTCTCACCACATGGTCACAAGAAGCAAGTTATTAGCAAAGAATCCAGTCCTTGATCCCACTCTTGCACATGAAATTAGCAAACTCAAAAACTCAAGACAACAAAGAACACTTATAGCAATGAGTCACAAATATGAGCCAAAAAACTACAAAATGGCCCTATCTTTTCCTCATTGGAAGGATGCCATGGAGGAAGAAATGAAGGCTTTAATGTTGAACAACACATGGATCCTAGTTCAAAGACCACAAGATACAAATGTAGTAGAGTCAAAGTGGATCTTCAAGACAAAGTGCAAGGGAGATGGAACGATTAATCGCTACAAGGCTAGACTTGTAGCTCAAGGATACACACAAATTGAGGGTCTTAACTATGAAGAAACTTATAGCCCAGTAAATCAAACCAACAACAATCAGAGACAAATCTATTTAACACTAATGCTTAATTACGTTGATGAAATTATATTGACAGGAAACAACTCATCACATATCCAACAACTCATAGGAACACTACGTTCACAATTTTGCCTTGAAAGACTTGGACAACTTACACTATTTCTTAGCATAGAAGTGAAGCACACTGCAAAAGGAATTATGCTATCACAAGGAAAATATGCTCGTGAAATACTCACCAAGTCAGGAATGTTGGGAGTTGCTGCCATTAATACTCCAATCATGACCTCACCTCAAGATACCCATAAGGACACTCAACCCACTGATGCAAAGGAATACAGGAGCATCGTTGGATTGTTGCAATACCTTACACTCACACGACCTGATATAGTATATGCAGTTAATTGTGTATGCCAACACCTACAACAGCCCATCGTTAAGGATCTCAAAGCTGTGAAAAGGATTCTTCGATACATACAAGGAACCCTCGACTACGATATCTCTCTTTATAAAAACAATTCACTAAATTTATATGCTTTTTGTGATGCAGATTGGGGTGGCTGCCCTCTTACACGAAGTACTACAGGCTTTTGTGTATTCCTCAGATCCAATTGTATCTCATCACTACAAGAATCTCGGGATTCGTCGACGCAAACAGACGTCGGCAAATCCCTCTTTTGCGTCGGCAAAAAGGAAACGACGATGCAATCATGCGTCGGCTTAAATGTCGCTAAATCCTTGTTGGCATCCAAAAAACTGACGAAAATGGCGGTTCGTGGGCAGAAAGGTACATTTTCGCCAACGCAAACTCTTGCGTTGCCTAAACCTGTAATAACCGATGCAACATGCGTCGGTTATAATACGGTTTCATTTATCAGATTTTTGAGTTTAGCCCACGCAAGAAGCGTCGGTGAAAGTCATAAATTGCGTCGGCTACAATACGACTTCATTCCACAGATTTTCGAGATGAGGCCACGAAATTGCGTCGGTGAAAATAAAAATTGCGTCGGCTAA MVVLKDTPEETHTPTTPTDQDVNTTIILNLRHDTPILQVNQGIFETNETDISKLGKDFTLLENQVHYQDGTYAHDDSMTMTPTLITPNEAAKLSDISKNLHIDLPTLIAGTIPKQGVLAQVNGFSSHHMVTTSKLAKNLVLDPTLAHQISKLKNSRQQRTLIAMSHKSEPQNYKMALSLPHWKDAMDEEMKALMLNNTWILVQRPQDTNVVESKSIFKIKCKEDGTINRYKARLVAQGYTQIEGLNYEETYSPVNQTNNNQLSDISKNLHIDLPTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPHWKDAMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPVNQTNNNQRQIYLTLMLNYVDEIILTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLTRSTTGFCVFLRSNCISSLQESRDSSTQTDVGKSLFCVGKKETTMQSCVGLNVAKSLLASKKLTKMAVRGQKGTFSPTQTLALPKPVITDATCVGYNTVSFIRFLSLAHARSVGESHKLRRLQYDFIPQIFEMRPRNCVGENKNCVG Homology
BLAST of Lag0018094 vs. NCBI nr
Match: GAU44375.1 (hypothetical protein TSUD_243070 [Trifolium subterraneum]) HSP 1 Score: 300.8 bits (769), Expect = 3.3e-77 Identity = 168/384 (43.75%), Postives = 211/384 (54.95%), Query Frame = 0
BLAST of Lag0018094 vs. NCBI nr
Match: RVX04589.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]) HSP 1 Score: 296.6 bits (758), Expect = 6.2e-76 Identity = 184/464 (39.66%), Postives = 243/464 (52.37%), Query Frame = 0
BLAST of Lag0018094 vs. NCBI nr
Match: RVW43526.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]) HSP 1 Score: 296.2 bits (757), Expect = 8.1e-76 Identity = 184/464 (39.66%), Postives = 243/464 (52.37%), Query Frame = 0
BLAST of Lag0018094 vs. NCBI nr
Match: RVW19921.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]) HSP 1 Score: 292.0 bits (746), Expect = 1.5e-74 Identity = 175/431 (40.60%), Postives = 239/431 (55.45%), Query Frame = 0
BLAST of Lag0018094 vs. NCBI nr
Match: PNY16899.1 (copia-like polyprotein, partial [Trifolium pratense]) HSP 1 Score: 291.6 bits (745), Expect = 2.0e-74 Identity = 166/384 (43.23%), Postives = 207/384 (53.91%), Query Frame = 0
BLAST of Lag0018094 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 1.4e-46 Identity = 143/451 (31.71%), Postives = 203/451 (45.01%), Query Frame = 0
BLAST of Lag0018094 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 4.1e-46 Identity = 143/502 (28.49%), Postives = 222/502 (44.22%), Query Frame = 0
BLAST of Lag0018094 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 5.8e-45 Identity = 95/210 (45.24%), Postives = 137/210 (65.24%), Query Frame = 0
BLAST of Lag0018094 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 127.5 bits (319), Expect = 6.5e-28 Identity = 90/364 (24.73%), Postives = 161/364 (44.23%), Query Frame = 0
BLAST of Lag0018094 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 5.7e-24 Identity = 111/426 (26.06%), Postives = 176/426 (41.31%), Query Frame = 0
BLAST of Lag0018094 vs. ExPASy TrEMBL
Match: A0A2Z6P7T0 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_243070 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 1.6e-77 Identity = 168/384 (43.75%), Postives = 211/384 (54.95%), Query Frame = 0
BLAST of Lag0018094 vs. ExPASy TrEMBL
Match: A0A438J6K3 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_103 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 3.0e-76 Identity = 184/464 (39.66%), Postives = 243/464 (52.37%), Query Frame = 0
BLAST of Lag0018094 vs. ExPASy TrEMBL
Match: A0A438E6Z5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1575 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 3.9e-76 Identity = 184/464 (39.66%), Postives = 243/464 (52.37%), Query Frame = 0
BLAST of Lag0018094 vs. ExPASy TrEMBL
Match: A0A438C9J9 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_1040 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 7.4e-75 Identity = 175/431 (40.60%), Postives = 239/431 (55.45%), Query Frame = 0
BLAST of Lag0018094 vs. ExPASy TrEMBL
Match: A0A2K3PNP5 (Copia-like polyprotein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g013628 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 9.6e-75 Identity = 166/384 (43.23%), Postives = 207/384 (53.91%), Query Frame = 0
BLAST of Lag0018094 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein ) HSP 1 Score: 184.1 bits (466), Expect = 4.2e-46 Identity = 95/210 (45.24%), Postives = 137/210 (65.24%), Query Frame = 0
BLAST of Lag0018094 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 169.9 bits (429), Expect = 8.1e-42 Identity = 118/397 (29.72%), Postives = 176/397 (44.33%), Query Frame = 0
BLAST of Lag0018094 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) ) HSP 1 Score: 100.5 bits (249), Expect = 6.0e-21 Identity = 50/96 (52.08%), Postives = 65/96 (67.71%), Query Frame = 0
BLAST of Lag0018094 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein ) HSP 1 Score: 70.1 bits (170), Expect = 8.7e-12 Identity = 35/92 (38.04%), Postives = 54/92 (58.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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