Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCGATCGTTAGACCCATGGTTCACCGCTGCCTTTTGTGTTTGTCGTGAGCCACCGTCGGAGAAGAAGAATAGAGAGGGGGTTGCGGGCTATATGGTTTGAAGCTTCCACTGCACGTTGTTCACTGGAGTCGCGTGCCTTTGCCGGAGGAGAGACGTCGGAGGAGGTGGCTTGGGTGCAGCGGGAGAAATTGGAGATACTGACAGCTGAGGAAGAAAATAATGGATGGAGAAAATAGGCTCTGAGAGGGAGGGAAAGATGGGACACGCATGTTACAATTTTTTTTTCTTTTTTTCTTTTCTTTTTTTTTTCTTTTTTTACAACTAAGATATTTCTTTCAACCGCCAAACTATGAAGGTGGAGCGGAACGAGGCCATCAGCCGCCACCGACTTTGAAGATGGAGCAGAACGAGGTCGTCAGCCGCCAACATTTGAAGATGGAGTGAGACCGAAGCCGTCAAACGCCAACATTTGAAGATGGAGTGAGGCCGAAGCCGTCAACCGCCAACATTTGAAGATGGAGCGAGGCCGAAGCCGTCAATCGCCGACTTTGGAGATGAAGTTGTCGTCAACCGCATCTTACCTTGGGAAGTGATCATCCTCTGATTCAGGCGGAATTCAGGCTGATCACTTGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGAATCAGGCGGAATTCAGGTTGATCATTCACCCTTCACATCTTGCCTCAAGCAGTGATCAACCCCTAATTCAGGCGGAATTCAGGATGATCACTTGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCCTTGATTCAGGAGGAATTCATGATGATCACTTGTCCTTCACCTCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCAGGATGATCACTTGCCCTTCACATCTTGCCTCAGGTAGTGATCAACCCTTGATTCAGGCGGAATTCAGGATGATCACTTGTCCTTCACCTCTTGCCTCAGGCAGTGATCAACTCCTGATTCAGGCGAAATTCAAGATGATCACTTGCCCTTCACATCTTGCCTCAGGTAGTGACCAACCCTTGATTCAGGTGGAATTCAAGATGATCACTTGTCCTTCGCCTCTTGCCTCAGGCAGTGATCAACACCTGATTCAGGCGGAATTCAGGATGATCACTTGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCATTGATTCAGGCGGAATTCAGGATGATCACTTGTCCTTCACCTCCTGCCTTAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCATGATGATCACTTGCCCTTCACATCTTGTCTCAGGCAGCGATCAACCCCTGATTTAG
mRNA sequence
ATGAGCCGATCGTTAGACCCATGGTTCACCGCTGCCTTTTGTGTTTGTCGTGAGCCACCGTCGGAGAAGAAGAATAGAGAGGGGGTTGCGGGCTATATGGCGGAATTCAGGCTGATCACTTGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGAATCAGGCGGAATTCAGGTTGATCATTCACCCTTCACATCTTGCCTCAAGCAGTGATCAACCCCTAATTCAGGCGGAATTCAGGATGATCACTTGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCCTTGATTCAGGAGGAATTCATGATGATCACTTGTCCTTCACCTCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCAGGATGATCACTTGCCCTTCACATCTTGCCTCAGGTAGTGATCAACCCTTGATTCAGGCGGAATTCAGGATGATCACTTGTCCTTCACCTCTTGCCTCAGGCAGTGATCAACTCCTGATTCAGGCGAAATTCAAGATGATCACTTGCCCTTCACATCTTGCCTCAGGTAGTGACCAACCCTTGATTCAGGTGGAATTCAAGATGATCACTTGTCCTTCGCCTCTTGCCTCAGGCAGTGATCAACACCTGATTCAGGCGGAATTCAGGATGATCACTTGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCATTGATTCAGGCGGAATTCAGGATGATCACTTGTCCTTCACCTCCTGCCTTAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCATGATGATCACTTGCCCTTCACATCTTGTCTCAGGCAGCGATCAACCCCTGATTTAG
Coding sequence (CDS)
ATGAGCCGATCGTTAGACCCATGGTTCACCGCTGCCTTTTGTGTTTGTCGTGAGCCACCGTCGGAGAAGAAGAATAGAGAGGGGGTTGCGGGCTATATGGCGGAATTCAGGCTGATCACTTGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGAATCAGGCGGAATTCAGGTTGATCATTCACCCTTCACATCTTGCCTCAAGCAGTGATCAACCCCTAATTCAGGCGGAATTCAGGATGATCACTTGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCCTTGATTCAGGAGGAATTCATGATGATCACTTGTCCTTCACCTCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCAGGATGATCACTTGCCCTTCACATCTTGCCTCAGGTAGTGATCAACCCTTGATTCAGGCGGAATTCAGGATGATCACTTGTCCTTCACCTCTTGCCTCAGGCAGTGATCAACTCCTGATTCAGGCGAAATTCAAGATGATCACTTGCCCTTCACATCTTGCCTCAGGTAGTGACCAACCCTTGATTCAGGTGGAATTCAAGATGATCACTTGTCCTTCGCCTCTTGCCTCAGGCAGTGATCAACACCTGATTCAGGCGGAATTCAGGATGATCACTTGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCATTGATTCAGGCGGAATTCAGGATGATCACTTGTCCTTCACCTCCTGCCTTAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCATGATGATCACTTGCCCTTCACATCTTGTCTCAGGCAGCGATCAACCCCTGATTTAG
Protein sequence
MSRSLDPWFTAAFCVCREPPSEKKNREGVAGYMAEFRLITCPSHLASGSDQPLNQAEFRLIIHPSHLASSSDQPLIQAEFRMITCPSHLASGSDQPLIQEEFMMITCPSPLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQAEFRMITCPSPLASGSDQLLIQAKFKMITCPSHLASGSDQPLIQVEFKMITCPSPLASGSDQHLIQAEFRMITCPSHLASGSDQPLIQAEFRMITCPSPPALGSDQPLIQAEFMMITCPSHLVSGSDQPLI
Homology
BLAST of Lag0018087 vs. NCBI nr
Match:
KAG7335348.1 (hypothetical protein KOW79_001944 [Hemibagrus wyckioides])
HSP 1 Score: 110.5 bits (275), Expect = 2.3e-20
Identity = 63/238 (26.47%), Postives = 105/238 (44.12%), Query Frame = 0
Query: 38 LITCPSHLASGSDQPLNQAEFRLIIHPSHLASSSDQPLIQAEFRMITCPSHLASGSDQPL 97
L++ P HL + S + + + P HL +SS + + +++ P HL + S L
Sbjct: 127 LLSSPHHLITCSHHLITSSPALITSSPHHLITSSPALITSSPHHLLSSPHHLITSSPHHL 186
Query: 98 IQEEFMMITCPSPLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQAEFRMITCPSPLAS 157
+ +IT L + S L+ + +ITC HL + S L+ + +ITC L +
Sbjct: 187 LSSPHHLITSSPALITSSPHHLLSSPHHLITCSHHLITSSPHHLLSSPHHLITCSHHLIT 246
Query: 158 GSDQLLIQAKFKMITCPSHLASGSDQPLIQVEFKMITCPSPLASGSDQHLIQAEFRMITC 217
S L+ + +IT L + S + +ITC L + S HL+ + +ITC
Sbjct: 247 SSPALITSSPHHLITSSPALITSSPALITSSPHHLITCSHHLITSSLDHLLSSPHHLITC 306
Query: 218 PSHLASGS------DQPLIQAEFRMITCPSPPALGSDQPLIQAEFMMITCPSHLVSGS 270
HL + S LI + +IT L S L+ + +ITC HL++ S
Sbjct: 307 SHHLITCSHHLITCSHHLITSSPALITSSPDHLLSSPHHLLSSPHHLITCSHHLITSS 364
BLAST of Lag0018087 vs. NCBI nr
Match:
CAE1322405.1 (unnamed protein product [Sepia pharaonis])
HSP 1 Score: 98.6 bits (244), Expect = 8.9e-17
Identity = 78/215 (36.28%), Postives = 86/215 (40.00%), Query Frame = 0
Query: 36 FRLITC---PSHLASGSDQPLNQAEFRLIIH--PSHLASSSDQPLIQAEFRMITCPSHLA 95
FRL TC P+HL S S P FRL + PSHL SSS P I P+HL
Sbjct: 39 FRL-TCYPLPTHLLSSSVSP--AILFRLTCYRLPSHLLSSSVSPAILFRLTCYPLPTHLL 98
Query: 96 SGSDQPLIQEEFMMITCPSPLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQAEFRMIT 155
S S P I PS L S SD P I P+HL S SD P I
Sbjct: 99 SLSVSPAILFRLTCYPLPSHLPSSSDSPAILFRLTCYPLPTHLLSSSDSPAIFFRLTCYP 158
Query: 156 CPSPLASGSDQLLIQAKFKMITCPSHLASGSDQPLIQVEFKMITCPSPLASGSDQHLIQA 215
PS L S S I + PSHL S SD P I P+ L S S I
Sbjct: 159 LPSHLLSSSVSPAILFRLTCYLLPSHLLSYSDSPAILFRLTCHRLPTHLLSSSVSPAIVF 218
Query: 216 EFRMITCPSHLASGSDQPLIQAEFRMITCPSPPAL 246
P+HL S S P I FR+ P P L
Sbjct: 219 RLTCHCLPTHLLSSSVSPAIL--FRLTCYPLPTHL 248
BLAST of Lag0018087 vs. NCBI nr
Match:
MBN9393447.1 (hypothetical protein [Chloroflexi bacterium] >OJV86965.1 hypothetical protein BGO39_28595 [Chloroflexi bacterium 54-19])
HSP 1 Score: 86.3 bits (212), Expect = 4.6e-13
Identity = 63/248 (25.40%), Postives = 110/248 (44.35%), Query Frame = 0
Query: 27 EGVAGYMAEFRLITCPSHLASGSDQPLNQAEFRLII--HPSHLASSSDQPLIQAEFRMIT 86
+G A +A +++T S A+ + Q + I P+ A+ P QA IT
Sbjct: 216 KGAASVVAGSQVVTFASPTATAKGAGIGQTNSQTIAVSSPAATATGIQNPTAQAGSSTIT 275
Query: 87 CPSHLASGSDQPLIQEEFMMITCPSPLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQA 146
S A+ S +Q ++T SP A+GS + A ++++ S AS + QA
Sbjct: 276 LISPAATPSSDATVQANSQVVTLLSPAATGSGDAVAPANSQVVSVASSSASATGTATGQA 335
Query: 147 EFRMITCPSPLASGSDQLLIQAKFKMITCPSHLASGSDQPLIQVEFKMITCPSPLASGSD 206
+I SP+++G A + + S +A+ + + Q + +T SP A+ +
Sbjct: 336 GSTVIAVASPVSTGQGDATATAASQSLVVTSPIATATGSAVGQATSQSVTLASPAATATG 395
Query: 207 QHLIQAEFRMIT--CPSHLASGSDQPLIQAEFRMITCPSPPALGSDQPL--IQAEFMMIT 266
+QA + IT P+ A+ S QA +IT SP A+GS + + ++ + +T
Sbjct: 396 TATVQASSQTITVSSPTATATTSGNATGQAGSSVITLASPAAVGSGAAVAPVVSQTITLT 455
Query: 267 CPSHLVSG 269
P SG
Sbjct: 456 GPGATASG 463
BLAST of Lag0018087 vs. NCBI nr
Match:
CAE1298543.1 (unnamed protein product [Sepia pharaonis])
HSP 1 Score: 84.0 bits (206), Expect = 2.3e-12
Identity = 75/246 (30.49%), Postives = 82/246 (33.33%), Query Frame = 0
Query: 39 ITC---PSHLASGSDQPLNQAEFRLIIHPSHLASSSDQPLIQAEFRMITCPSHLASGSDQ 98
+TC P HL S S F P HL SSS P I F P L S S
Sbjct: 416 LTCYPLPPHLLSSSTSTDILFHFTCYPLPPHLLSSSTSPAILFRFTCYPLPPQLLSSSAS 475
Query: 99 PLIQEEFMMITCPSPLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQAEFRMITCPSPL 158
P I P+ L S S P+I F P HL S S I + P L
Sbjct: 476 PAILFRLTCYPLPTHLLSSSASPVILFHFTCHPLPPHLLSSSTSYAILFHLTCNSLPPHL 535
Query: 159 ASGSDQLLIQAKFKMITCPSHLASGSDQPLIQVEFKMITCPSPLASGSDQHLIQAEFRMI 218
S S I F P HL S S P I L S S I F
Sbjct: 536 LSSSTSPAILFHFTCHPLPPHLLSPSASPAILFRLTCYPLTLHLLSSSTSPAILFHFTCH 595
Query: 219 TCPSHLASGSDQPLIQAEFRMITCPSP-----PAL--GSDQPLIQAEFMMITCPSHLVSG 275
P HL S S P I + C +P PA+ P I F P HL S
Sbjct: 596 PLPPHLLSPSASPAI------LFCLTPSSYLQPAILFHLTSPAILLHFTCCPLPPHLQSS 655
BLAST of Lag0018087 vs. NCBI nr
Match:
XP_036798068.1 (uncharacterized protein LOC118938392 [Oncorhynchus mykiss])
HSP 1 Score: 77.4 bits (189), Expect = 2.1e-10
Identity = 47/167 (28.14%), Postives = 78/167 (46.71%), Query Frame = 0
Query: 106 TCPSPLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQAEFRMITCPSPLASGSDQLLIQ 165
T PSP+ S +Q + + T PS + S +Q + + R T PSP+ S +QL+ +
Sbjct: 693 TAPSPVPSAREQLIKELAGHSTTAPSPVPSAREQLIKELAGRSTTAPSPVPSAREQLIKE 752
Query: 166 AKFKMITCPSHLASGSDQPLIQVEFKMITCPSPLASGSDQHLIQAEFRMITCPSHLASGS 225
+ T PS + S +Q + ++ T PSP+ S +Q + + R T PS + S
Sbjct: 753 LAGRSTTAPSPVPSAREQLIKELAGHSTTAPSPVPSAREQLIKELAGRSTTAPSPVPSAR 812
Query: 226 DQPLIQAEFRMITCPSPPALGSDQPLIQAEFMMITCPSHLVSGSDQP 273
+Q + + R T PSP + S P + P ++ +G D P
Sbjct: 813 EQLIKELAGRSTTAPSP--VPSVPPATS-----VHLPKYICAGMDVP 852
BLAST of Lag0018087 vs. ExPASy TrEMBL
Match:
A0A1Q3SFW0 (Uncharacterized protein OS=Chloroflexi bacterium 54-19 OX=1895928 GN=BGO39_28595 PE=4 SV=1)
HSP 1 Score: 86.3 bits (212), Expect = 2.2e-13
Identity = 63/248 (25.40%), Postives = 110/248 (44.35%), Query Frame = 0
Query: 27 EGVAGYMAEFRLITCPSHLASGSDQPLNQAEFRLII--HPSHLASSSDQPLIQAEFRMIT 86
+G A +A +++T S A+ + Q + I P+ A+ P QA IT
Sbjct: 216 KGAASVVAGSQVVTFASPTATAKGAGIGQTNSQTIAVSSPAATATGIQNPTAQAGSSTIT 275
Query: 87 CPSHLASGSDQPLIQEEFMMITCPSPLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQA 146
S A+ S +Q ++T SP A+GS + A ++++ S AS + QA
Sbjct: 276 LISPAATPSSDATVQANSQVVTLLSPAATGSGDAVAPANSQVVSVASSSASATGTATGQA 335
Query: 147 EFRMITCPSPLASGSDQLLIQAKFKMITCPSHLASGSDQPLIQVEFKMITCPSPLASGSD 206
+I SP+++G A + + S +A+ + + Q + +T SP A+ +
Sbjct: 336 GSTVIAVASPVSTGQGDATATAASQSLVVTSPIATATGSAVGQATSQSVTLASPAATATG 395
Query: 207 QHLIQAEFRMIT--CPSHLASGSDQPLIQAEFRMITCPSPPALGSDQPL--IQAEFMMIT 266
+QA + IT P+ A+ S QA +IT SP A+GS + + ++ + +T
Sbjct: 396 TATVQASSQTITVSSPTATATTSGNATGQAGSSVITLASPAAVGSGAAVAPVVSQTITLT 455
Query: 267 CPSHLVSG 269
P SG
Sbjct: 456 GPGATASG 463
BLAST of Lag0018087 vs. ExPASy TrEMBL
Match:
A0A286UW21 (Golgin subfamily A member 6 6-like protein OS=Pyrrhoderma noxium OX=2282107 GN=PNOK_0071300 PE=4 SV=1)
HSP 1 Score: 75.5 bits (184), Expect = 3.9e-10
Identity = 62/237 (26.16%), Postives = 104/237 (43.88%), Query Frame = 0
Query: 50 DQPLNQAEFRLIIHPSHLASSSDQPLIQAEFRMITCPSH-LASGSDQPLIQ-EEFMMITC 109
+QPL Q+E + ++ S+QPL Q+E + + L DQP+ Q EE ++
Sbjct: 2512 EQPLYQSEEQPVLQEEQPLYQSEQPLYQSEEQPVFQEERPLYQSEDQPVYQSEEQPVLQA 2571
Query: 110 PSPLASGSDQPLIQAEFRMITCPSHLAS-----GSDQPLIQAEFRMITCP-SPLASGSDQ 169
PL S+QPL Q+E + + S +QP++Q E + P+ +Q
Sbjct: 2572 EQPLYQ-SEQPLYQSEDQPVYSEGQYQSSPAYQSEEQPVLQEEQPLYQSEGQPIYQSEEQ 2631
Query: 170 LLIQAKFKMITCPSHLASGSDQPLIQVEFKMITCPSPLASGSDQHLIQAEFRMITCPSHL 229
+ Q + + L DQP+ + E + PL S++ I +E + + P +
Sbjct: 2632 PVYQEEQPLYQSEQPLYQSEDQPVYREEQPLYQSEQPLYR-SEEQPIYSEGQYQSSPVYQ 2691
Query: 230 AS-----GSDQPLIQAEFRMITCPSPPALGSDQPLIQAEFMMITCPSHLVSGSDQPL 274
+ +QPL Q+E + PAL +QPL Q+E + V +QPL
Sbjct: 2692 SEEQPVLQEEQPLYQSEQPLYRSEEQPALQEEQPLYQSEQPLYQSQERPVYQEEQPL 2746
BLAST of Lag0018087 vs. ExPASy TrEMBL
Match:
A0A3P8S3J1 (Uncharacterized protein OS=Amphiprion percula OX=161767 PE=4 SV=1)
HSP 1 Score: 69.3 bits (168), Expect = 2.8e-08
Identity = 61/237 (25.74%), Postives = 85/237 (35.86%), Query Frame = 0
Query: 38 LITCPSHLASGSDQPLNQAEFRLIIHPSHLASSSDQPLIQAEFRMITCPSHLASGSDQPL 97
LI PS PL + LI+ PS PLI+ +I PS PL
Sbjct: 186 LIEPPSLTLIVPPSPLIEPPSPLIVPPS--------PLIEPPSPLIEPPSLTLIVPPSPL 245
Query: 98 IQEEFMMITCPSPLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQAEFRMITCPSPLAS 157
I+ +I PSPL ++ +I PS L ++ +I PSPL
Sbjct: 246 IEPPSPLIEPPSPLIEPPSPLIVPPSLTLIVPPSPLIEPPSPLIVPPSLTLIVPPSPLIE 305
Query: 158 GSDQLLIQAKFKMITCPSHLASGSDQPLIQVEFKMITCPSPLASGSDQHLIQAEFRMITC 217
LI +I PS L ++ +I PSPL LI +I
Sbjct: 306 PPSLTLIVPPSPLIVPPSPL-------IVPPSLTLIEPPSPLIVPPSLTLIVPPSPLIVP 365
Query: 218 PSHLASGSDQPLIQAEFRMITCPSPPALGSDQPLIQAEFMMITCPSHLVSGSDQPLI 275
PS PLI+ + P P + PLI+ + + P + PLI
Sbjct: 366 PSLTLIEPPSPLIEPPSLTLIVPPSPLIEPPSPLIEPPSLTLIVPPSPLIEPPSPLI 407
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7335348.1 | 2.3e-20 | 26.47 | hypothetical protein KOW79_001944 [Hemibagrus wyckioides] | [more] |
CAE1322405.1 | 8.9e-17 | 36.28 | unnamed protein product [Sepia pharaonis] | [more] |
MBN9393447.1 | 4.6e-13 | 25.40 | hypothetical protein [Chloroflexi bacterium] >OJV86965.1 hypothetical protein BG... | [more] |
CAE1298543.1 | 2.3e-12 | 30.49 | unnamed protein product [Sepia pharaonis] | [more] |
XP_036798068.1 | 2.1e-10 | 28.14 | uncharacterized protein LOC118938392 [Oncorhynchus mykiss] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1Q3SFW0 | 2.2e-13 | 25.40 | Uncharacterized protein OS=Chloroflexi bacterium 54-19 OX=1895928 GN=BGO39_28595... | [more] |
A0A286UW21 | 3.9e-10 | 26.16 | Golgin subfamily A member 6 6-like protein OS=Pyrrhoderma noxium OX=2282107 GN=P... | [more] |
A0A3P8S3J1 | 2.8e-08 | 25.74 | Uncharacterized protein OS=Amphiprion percula OX=161767 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |