Lag0018084 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0018084
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr5: 15785524 .. 15789879 (-)
RNA-Seq ExpressionLag0018084
SyntenyLag0018084
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCCATTCCGTTCCAATGGGTTCCGACTGTGGGAGAGGAGAGGGAAAAAAGAAAGAAAAAACTGAATTGCGGCGATCGACAGTGGTCGACGGCGACGGCGACGACCGACAATGGTCGGCGACTGGTGGCTGTCGGGGTGAGTTGAGAACTTGAGATTAGGGTTTGAGAGTGAGAAGATTAAGGAAGAAGATGAATAAAAGAAAAAGAAAAAAGAAAAGAAAAAAGAAAAAGTAAAAGAATAAAATAGTGTTTAATATATTATTTTATTTTAAAAGATTAAAAATATATTTTTTAATAAAAAAACTAATGCCACATCAGCAGTCTGTTAATGTTTAACGACAAATCTGACGGAGGGATCAAAAGTGTAACGAAATCCAAACCTCAGGGGTAAAAATGTTGAGTTTGAAAACTCAGGGACCAAAATGAAACCTAATCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCAAAAAAAAAACATAAGAAAGAAAGAAAGGAGAAGAAGAGAAGAAGGGAAGAAGAAGAAAGAAGAAAAAAAAATTTCGGCGACGCCGCCGCCGTTCGCCGGCAGCCGGCGGTGGCCGGCCACCGGCGTGGAAGAAGAAAGAGATGGGGAAGGAAGAAGGGTGGGGAAGGAAGAAGAAGATGGAGAAGGAAGAGAGAAAGAATTTGAAAAAATTAATAAAATAATAATATTTTATATTTTAATATATTTTTATTTAAAAAATTTTAAAAATATTTTTTATTAAAATAATGGTGCCACGTCAGCAAACTGTTAGGGTTTAACGGCAAAATGGACGGCAGGAACCAAATTGCTCCTTATCTCAAAGGGAAAAATACACTTTTGGTCCCTGAGGTTTGGGTTAAGTTACACTTTGGTCCCTGAGTTTTAAAACTCAACAAAAATACCCCTGAGGTTTGAGATAAGGAGCAATTTGGTCTCTGTCGTCCATTTTTCCATTAAATACTAACAAAATGTCGACCTGACACTATTATTTTAATTAAAAAAATTAATTTTGAAAATTTTTAAATAAAATATATATTAAAATAATAAAAATATTATTATTTTATTAAATATTTTTAATTCTTTTCTCACTCTTTCTTCTCCTTCTTTCTCTTCCCCTTCTTCTCACACGGTAAGTTTTTTTTTCTCTCTCTTTTATTCTCTCTTCTCCTCTATTTTTCAACCTTTTCTTTCTTTTTTTTTTGGAAATACACTTTTGGTCCCTGAGGTTTGGGTTAAGTGACACTTTGGTCCCTGAGTTTTCAAACTCAACAAAAATACCCCGAGGTTTGAGGTAAGGATCACTTTGGTCCCTGCCGTCAATTTTTCTGTTAACTTTTAACGGTTGCTGACGTGGCACTATTATTTAATATAAAAAATTATTTATTTTATTTTTTAAATAAAAATATTTAAAAAATATATAATATTAATATTTTTTTATTTTTTTATTCTTTCTCCCTTTCTCTCTCATCATCTTCTTCTTCTTTTCCATCTTCTCCATCTTCTCCTTCCTAATTCTTCTTCTTCCTATGTCCGGCGACCGACGGCCACTGCTCGCCGCCGCTGGCGATTTTTTTTTTCCTTTCTCTTCTTTCCTCTTTTTCTCTTCTTTCTTCTTCCCTACATTTTTCTTCACTGCTTTTTTTTAAAAAAAAAAAACAGAAAGGGGAGGGAGGTCCCTCCTCCCTCCCTCGTTCCAGATCTGGAACGTCTCTCCTCCCTCCCTCGTTCCAGATCTGGAACGGGGAGGTTTTTAAGAAGCAGTGAAGAAAATGTAGGGAAGAAGAAAGAAGAGAAAAAGAGGAAAGAAGAGAAAGGAAAAAAAAAATCGCCGGCGACGGCGAGCGGTGGTTGTCGGTTGTCGGACATAGGAAGAAGAAGAAGAGGAAGGAGAAGGTGGAGAAGATAGAGAAGATGGAAAAGAAGAAGAAGATGATGAGAGAGAAAGGGAGAAAGAATAAACAAAATAATAAAATATTAATATTTTATATTTTTTAAATATTTTTTATTTAAAAAAATAAAATAAATAATTTTTTATATTAAAATAATAGTGCCACGTCAGCAACCGTTAAAAGTTAACAGAAAAATTGACGGCAGGGACCAAAGTGCTCCTTTTCTCAAACCTCGGGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACCAAAGTGTCACTTAACCCAAACCTCAGGGACCAAAAGTGTCTTTTTCCCTTTTTTTTTATAAAGAAGAGGGAAAGGGAGGAGGGCTCCTCCTCCCTTTCCGACGCCAGCGACGGGAGGAGGGAGGCCCTCCTCCCTTTCCCTCTTCTTTATAAACAAAAAAAAAAAAGAAAAGGTTGAGAAATAGAGGAGAAGAGAGAATAAAAGAGAGAAAGGAAAAAAAACACTTACCGGCGGTCGGCGGCGGCTGGCCGACGAACGACGGCGGCCGCCGGCCAGCGGAGTTGGAGAAGGAGTGTGAGAAGAAGAAGTTGGAGAAGGTAGGTGAAGAGAAAGAAGGAGAAGAAAGAGTGAGAAAAGAATTAAAAATATTTAATAAAATAATAATATTTTTATTATTTTAATATATATTTTATTTAAAAATTTTCAAAATTAATTTTTTAATTAAAATAATAGTGCCACGTAAGCATTCCGTTAGTATTTAACGGAAAAATAGACGGCAGGGACCAAATTGCTCCTTATCTCAAACCTCAGGGGTATTTTTGTTAAGTTTGAAAACTCAGGGACCAAAGTGTAACTTAACTCAAACCTTAGGGACCAAAAGTGTATTTTTCCCTATCTCAACCTCAAGGCTATTTTTGTTGAGTTTGAAAACTCAGGGACTAAAGTATTACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCAAGTTAAAAAGGGAGTTTTTTTTAAAATCAGAATCTATGCGTAGAGATTTTATAACATTTATTTTAAATGATTAAATATTAAATAATTAAATAGGAAGGACAAATGAGGAATTTGAACATTAAAAAAGGGGCTAAAAGGAAATCAAAAGTTTCTCCCCTTAAGTGCCATTTATGTATATTATAGATTATAGATTATAGATTCTTTTCATGTCTACGAAAGTCAAGACAATTTTTTAAAACCAAAAAGTAGTTTTCAACAATGTTTTTTGTTTTTGGAATTTGACTAAAAATTCAGATGTGTAACGTCCGTAATTTAAGGAAAATTTCAAATTTCTTTAGTAGGAGTTAATTTGGGTTAAGAGGGAAAATATAGGGTGCGTTTGGTAGGTGATCTGAAAACAGAAATTTGAAAACAAAGGATTCAATGAAAACAAAGTTGTATTTCATGTTTTAGGATATGTGTTTGGAAGCAGATTTAGAAATTGGATTTCAATTTAAAAAATTGTTCAAAAGTGTTTGATAATATTTATAAACTATAAATGTAACAATCCGTATTTTTCAATACGGTCAAACTTTCAAAAATTGTTGAAGCGATTTAACAAAACGAAAAAAAAAAAAACACAACCTATTATTCAGAAACAAGGCTTACAACCAAAGCCAAGTCCAACACTCCAATCAAATAAATAACTAAACAATACAAAAACAACAAAACCTACAGAAGCCTACTAAATCCTACAGATCATAACTCCTCATTGGTCATGCCAGAACACTAGCCTAATCGCTGCCAGAACTATCACTTGTTCCATCATCTAAAAACATTTTAAAAACACAAAATGAGTACAAAAATACTCATTAAGCAACTTCCACATCAAGTTCACAATTCATTTTCGTTCAAAACAAAACATAAAATTTCAGGTAATAAAACATTTCAATAATCGAAACAAAATCATTCTTTCAGTCAAACAATACTTTCAAAACATATTGGGAAAGATGCATCAATGGAGTAGCTCAGAACAGAAGTGGTTACCTGTCGGTAACTGATAGCGAGCATAGCTAGCTATCTTTACTCATTTAATTAAGCTAGTCTTGTATGATTTTTGGGCCATTTTATTGCACTTTAATGTTTATTTTGTAGGAAATGGTTGATTGGAGCTATAATGCAATATCAGAGTTAATCGGGTGCTCGGGGCGTGAAAAGATGCAAAGGAATGAAAAGAGTAAAAGTGGAGAAAAGTCAAATCTCGGTCAACAGCAGGCTAGCGTCGAGACGCTAGCTCTTGAGCGTCTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTTACAGCGTCGAGACGCTATGATAGGAAGCGTCCCGACGCTACCGTTTTTCCTTATTCAGAACGCGCATTTAAGAGACAGCGTCGCGACGCTGTCTTGACAGCGTCTCGACGCTTCGACGAAAAATCAGAATATAAGCTTCACTTCGGCTAG

mRNA sequence

ATGGGTTCCATTCCGTTCCAATGGGTTCCGACTGTGGGAGAGGAGAGGGAAAAAAGAAAGAAAAAACTGAATTGCGGCGATCGACAGTGGTCGACGGCGACGGCGACGACCGACAATGGTCGGCGACTGGTGGCTGTCGGGGGGAGGGAGGTCCCTCCTCCCTCCCTCGTTCCAGATCTGGAACGTCTCTCCTCCCTCCCTCGTTCCAGATCTGGAACGGGGAGGTTTTTAAGAAGCAGTGAAGAAAATGTAGGGAAGAAGAAAGAAGAGAAAAAGAGGAAAGAAGAGAAAGGAAAAAAAAAATCGCCGGCGACGGCGAGCGGTGGTTGTCGGTTGTCGGACATAGGAAGAAGAAGAAGAGGAAGGAGAAGGTTGAGAAATAGAGGAGAAGAGAGAATAAAAGAGAGAAAGGAAAAAAAACACTTACCGGCGGTCGGCGGCGGCTGGCCGACGAACGACGGCGGCCGCCGGCCAGCGGAGTTGGAGAAGGAGTGTGAGAAGAAGAAGTTGGAGAAGGAAATGGTTGATTGGAGCTATAATGCAATATCAGAGTTAATCGGGTGCTCGGGGCGTGAAAAGATGCAAAGGAATGAAAAGAGTAAAAGTGGAGAAAAGTCAAATCTCGGTCAACAGCAGGCTAGCGTCGAGACGCTAGCTCTTGAGCGTCTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTTACAGCGTCGAGACGCTATGATAGGAAGCGTCCCGACGCTACCGTTTTTCCTTATTCAGAACGCGCATTTAAGAGACAGCGTCGCGACGCTGTCTTGACAGCGTCTCGACGCTTCGACGAAAAATCAGAATATAAGCTTCACTTCGGCTAG

Coding sequence (CDS)

ATGGGTTCCATTCCGTTCCAATGGGTTCCGACTGTGGGAGAGGAGAGGGAAAAAAGAAAGAAAAAACTGAATTGCGGCGATCGACAGTGGTCGACGGCGACGGCGACGACCGACAATGGTCGGCGACTGGTGGCTGTCGGGGGGAGGGAGGTCCCTCCTCCCTCCCTCGTTCCAGATCTGGAACGTCTCTCCTCCCTCCCTCGTTCCAGATCTGGAACGGGGAGGTTTTTAAGAAGCAGTGAAGAAAATGTAGGGAAGAAGAAAGAAGAGAAAAAGAGGAAAGAAGAGAAAGGAAAAAAAAAATCGCCGGCGACGGCGAGCGGTGGTTGTCGGTTGTCGGACATAGGAAGAAGAAGAAGAGGAAGGAGAAGGTTGAGAAATAGAGGAGAAGAGAGAATAAAAGAGAGAAAGGAAAAAAAACACTTACCGGCGGTCGGCGGCGGCTGGCCGACGAACGACGGCGGCCGCCGGCCAGCGGAGTTGGAGAAGGAGTGTGAGAAGAAGAAGTTGGAGAAGGAAATGGTTGATTGGAGCTATAATGCAATATCAGAGTTAATCGGGTGCTCGGGGCGTGAAAAGATGCAAAGGAATGAAAAGAGTAAAAGTGGAGAAAAGTCAAATCTCGGTCAACAGCAGGCTAGCGTCGAGACGCTAGCTCTTGAGCGTCTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTTACAGCGTCGAGACGCTATGATAGGAAGCGTCCCGACGCTACCGTTTTTCCTTATTCAGAACGCGCATTTAAGAGACAGCGTCGCGACGCTGTCTTGACAGCGTCTCGACGCTTCGACGAAAAATCAGAATATAAGCTTCACTTCGGCTAG

Protein sequence

MGSIPFQWVPTVGEEREKRKKKLNCGDRQWSTATATTDNGRRLVAVGGREVPPPSLVPDLERLSSLPRSRSGTGRFLRSSEENVGKKKEEKKRKEEKGKKKSPATASGGCRLSDIGRRRRGRRRLRNRGEERIKERKEKKHLPAVGGGWPTNDGGRRPAELEKECEKKKLEKEMVDWSYNAISELIGCSGREKMQRNEKSKSGEKSNLGQQQASVETLALERLDAHIPYQIRRVKLTASRRYDRKRPDATVFPYSERAFKRQRRDAVLTASRRFDEKSEYKLHFG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 77..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..102

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0018084.1Lag0018084.1mRNA