Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCAAGAAGATGAGGCAGTGGCTGCGCCTGGGGAAGAGACTGAAAATGAGCCAGTACAGGAGGCTCGGGTGGAGGTGGTCATGTCGGAGGTGCCTAGACGTCGCCGCATTAAGCGGAAGGCAAGGCGCATTCAAGAGATTAGGGATGATACCCCATCACCACCATCATCAGATTCTGAGAAGGCAGAGCGAGAGGAAAGAGAGAAAAAAGAGGCTGAAGGAAAAGAGAGAGAAGAGGCAGAAAAGAAGGCTGAGGAAGAACAGTTGCTCAAACGTAGGGCGGAAAAGGGCAAAAATATTGTTGAAGCATCGGCGGAACACGATGAAATAGAGGAACAACAATTGCCGTATGATCGCTTCGTCAACGATTTTGCCAGAGCAAAATACGCTGAGCTTCTGAAAAGATATTTCTTATTTGAACGAGGATTCAACGGTGATCTCCCACAGTTTTTGAGGACCGATATTACAGACCACGACTGGGCGCTATTTTGTGCAAAGCCTGAGTCTGTAAACGCACAGATGGTACGTGAATTTTATGCTAACATTGACAAGGAGGATGGATTCCAGGTGATTGTCCGAGGAGTTGAGGTAGATTGGAGTCCTAGTGCTATCAACGCATTGTACAATCTTCAGAACTTCCCCCATGGGACATATAATGAGATGGTTGTAGCGCCATCTAACGAGCAGTTAAGTGAAGCCGTAAGGAAGGTAGGAATTGAAGGAGTAGAGTGGCAGCTGTCAAAGACTCAGAAGAGGACATTCCAGTCGGCTTATTTGAAGAGGGAAGTGAACACGTGGATGGGATTTATCAGAGAAAGAATGCTTCCAACAACACACGACTCGACAATCTTCAGGGAATGGATTGCAAGCTGA
mRNA sequence
ATGGTTCAAGAAGATGAGGCAGTGGCTGCGCCTGGGGAAGAGACTGAAAATGAGCCAGTACAGGAGGCTCGGGTGGAGGTGGTCATGTCGGAGGTGCCTAGACGTCGCCGCATTAAGCGGAAGGCAAGGCGCATTCAAGAGATTAGGGATGATACCCCATCACCACCATCATCAGATTCTGAGAAGGCAGAGCGAGAGGAAAGAGAGAAAAAAGAGGCTGAAGGAAAAGAGAGAGAAGAGGCAGAAAAGAAGGCTGAGGAAGAACAGTTGCTCAAACGTAGGGCGGAAAAGGGCAAAAATATTGTTGAAGCATCGGCGGAACACGATGAAATAGAGGAACAACAATTGCCGTATGATCGCTTCGTCAACGATTTTGCCAGAGCAAAATACGCTGAGCTTCTGAAAAGATATTTCTTATTTGAACGAGGATTCAACGGTGATCTCCCACAGTTTTTGAGGACCGATATTACAGACCACGACTGGGCGCTATTTTGTGCAAAGCCTGAGTCTGTAAACGCACAGATGGTACGTGAATTTTATGCTAACATTGACAAGGAGGATGGATTCCAGGTGATTGTCCGAGGAGTTGAGGTAGATTGGAGTCCTAGTGCTATCAACGCATTGTACAATCTTCAGAACTTCCCCCATGGGACATATAATGAGATGGTTGTAGCGCCATCTAACGAGCAGTTAAGTGAAGCCGTAAGGAAGGTAGGAATTGAAGGAGTAGAGTGGCAGCTGTCAAAGACTCAGAAGAGGACATTCCAGTCGGCTTATTTGAAGAGGGAAGTGAACACGTGGATGGGATTTATCAGAGAAAGAATGCTTCCAACAACACACGACTCGACAATCTTCAGGGAATGGATTGCAAGCTGA
Coding sequence (CDS)
ATGGTTCAAGAAGATGAGGCAGTGGCTGCGCCTGGGGAAGAGACTGAAAATGAGCCAGTACAGGAGGCTCGGGTGGAGGTGGTCATGTCGGAGGTGCCTAGACGTCGCCGCATTAAGCGGAAGGCAAGGCGCATTCAAGAGATTAGGGATGATACCCCATCACCACCATCATCAGATTCTGAGAAGGCAGAGCGAGAGGAAAGAGAGAAAAAAGAGGCTGAAGGAAAAGAGAGAGAAGAGGCAGAAAAGAAGGCTGAGGAAGAACAGTTGCTCAAACGTAGGGCGGAAAAGGGCAAAAATATTGTTGAAGCATCGGCGGAACACGATGAAATAGAGGAACAACAATTGCCGTATGATCGCTTCGTCAACGATTTTGCCAGAGCAAAATACGCTGAGCTTCTGAAAAGATATTTCTTATTTGAACGAGGATTCAACGGTGATCTCCCACAGTTTTTGAGGACCGATATTACAGACCACGACTGGGCGCTATTTTGTGCAAAGCCTGAGTCTGTAAACGCACAGATGGTACGTGAATTTTATGCTAACATTGACAAGGAGGATGGATTCCAGGTGATTGTCCGAGGAGTTGAGGTAGATTGGAGTCCTAGTGCTATCAACGCATTGTACAATCTTCAGAACTTCCCCCATGGGACATATAATGAGATGGTTGTAGCGCCATCTAACGAGCAGTTAAGTGAAGCCGTAAGGAAGGTAGGAATTGAAGGAGTAGAGTGGCAGCTGTCAAAGACTCAGAAGAGGACATTCCAGTCGGCTTATTTGAAGAGGGAAGTGAACACGTGGATGGGATTTATCAGAGAAAGAATGCTTCCAACAACACACGACTCGACAATCTTCAGGGAATGGATTGCAAGCTGA
Protein sequence
MVQEDEAVAAPGEETENEPVQEARVEVVMSEVPRRRRIKRKARRIQEIRDDTPSPPSSDSEKAEREEREKKEAEGKEREEAEKKAEEEQLLKRRAEKGKNIVEASAEHDEIEEQQLPYDRFVNDFARAKYAELLKRYFLFERGFNGDLPQFLRTDITDHDWALFCAKPESVNAQMVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHGTYNEMVVAPSNEQLSEAVRKVGIEGVEWQLSKTQKRTFQSAYLKREVNTWMGFIRERMLPTTHDSTIFREWIAS
Homology
BLAST of Lag0018078 vs. NCBI nr
Match:
PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])
HSP 1 Score: 100.5 bits (249), Expect = 2.5e-17
Identity = 59/176 (33.52%), Postives = 87/176 (49.43%), Query Frame = 0
Query: 120 RFVNDFARAKYA-ELLKRYFLFERGF-------NGDLPQFLRTDITDHDWALFCAKPESV 179
+F + A +Y + R E+GF G LP F+ IT H+W FCA PE
Sbjct: 24 KFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDP 83
Query: 180 NAQMVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHGTYNEMVVAPSNEQL 239
+VREFYAN+ + V VRGV+V WS AINA++ L + P ++E + + + L
Sbjct: 84 IVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIQNITQQDL 143
Query: 240 SEAVRKVGIEGVEWQLSKTQKRTFQSAYLKREVNTWMGFIRERMLPTTHDSTIFRE 288
+ V G EW +S T + L W F++ R+LPTTH T+ ++
Sbjct: 144 ITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKD 197
BLAST of Lag0018078 vs. NCBI nr
Match:
PON70375.1 (hypothetical protein PanWU01x14_080440 [Parasponia andersonii])
HSP 1 Score: 99.0 bits (245), Expect = 7.2e-17
Identity = 51/157 (32.48%), Postives = 82/157 (52.23%), Query Frame = 0
Query: 134 LKRYFLFERGFNGDLPQFLRTDITDHDWALFCAKPESVNAQMVREFYANIDKEDGFQVIV 193
+++ F+++ + P F+ I H+W LFCA PE +VREFY N+ D V +
Sbjct: 66 VEKEFVWDNSKPLEQPPFIADVIIQHNWQLFCAHPEDPIVPLVREFYTNMTNPDDDTVYI 125
Query: 194 RGVEVDWSPSAINALYNLQNFPHGTYNEMVVAPSNEQLSEAVRKVGIEGVEWQLSKTQKR 253
RGV+V S AIN +++L + P ++E V + +L + V I G EW +S
Sbjct: 126 RGVQVPLSVEAINTIFSLGD-PIDEHSEFVEDITKPELVIVLETVAIVGAEWNVSSQGAY 185
Query: 254 TFQSAYLKREVNTWMGFIRERMLPTTHDSTIFREWIA 291
T + L W F++ R+LPTTH T+ +E ++
Sbjct: 186 TCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKEHVS 221
BLAST of Lag0018078 vs. NCBI nr
Match:
PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])
HSP 1 Score: 95.5 bits (236), Expect = 8.0e-16
Identity = 64/197 (32.49%), Postives = 92/197 (46.70%), Query Frame = 0
Query: 91 LKRRAEKGKNIVEASAEHDEIEEQQLPYDRFVNDFARAKYAELLKRYFLFERGFNGDLPQ 150
+KR A K V+ E E + +R +N AE K + L G LP
Sbjct: 3 IKRVARKAHKAVKFETEAAETRYENNIQNRPLN-------AE--KGFVLDNSETMGQLP- 62
Query: 151 FLRTDITDHDWALFCAKPESVNAQMVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYN 210
F+ IT H+W FCA PE +VREFYAN+ V VRGV+V WS AINA++
Sbjct: 63 FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFG 122
Query: 211 LQNFPHGTYNEMVVAPSNEQLSEAVRKVGIEGVEWQLSKTQKRTFQSAYLKREVNTWMGF 270
L + P ++E + + L + V + G EW +S T + L W F
Sbjct: 123 LGD-PVDEHSEFIENITEHDLITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHF 182
Query: 271 IRERMLPTTHDSTIFRE 288
++ +LPTTH T+ ++
Sbjct: 183 LKSHLLPTTHGKTVSKD 188
BLAST of Lag0018078 vs. NCBI nr
Match:
EXB77427.1 (hypothetical protein L484_000483 [Morus notabilis])
HSP 1 Score: 91.7 bits (226), Expect = 1.2e-14
Identity = 56/206 (27.18%), Postives = 98/206 (47.57%), Query Frame = 0
Query: 92 KRRAEKGKNI----------VEASAEHDEIEEQQLPYDRFVNDFARAKYAELLKRYFLFE 151
K +A KGK + + + E+ E+++ P D K A ++R F++
Sbjct: 4 KSKARKGKGVRILIDSDSSESDPATENAEVKKFASPEAEHRFDTCMNKRALHMERGFVYR 63
Query: 152 RGFNGDLPQFLRTDITDHDWALFCAKPESVNAQMVREFYANIDKEDGFQVIVRGVEVDWS 211
RG P F+ + I H W FC P + Q+VRE+ A D + VRG + ++
Sbjct: 64 RGRPSGYPSFIHSVIAAHKWHSFCHNPHAATVQLVREYAAEPD-----TIFVRGQLIPFT 123
Query: 212 PSAINALYNLQNFPHGTYNEMVVAPSNEQLSEAVRKVGIEGVEWQLSKTQKRTFQSAYLK 271
AIN+LY+L + +N + + +QL E + ++ +EG EW+ + TF L+
Sbjct: 124 SEAINSLYDLPDV-EDHFNNFADSLNEDQLDEVINELCVEGTEWRRATRGSMTFPRECLQ 183
Query: 272 REVNTWMGFIRERMLPTTHDSTIFRE 288
W F+R R++P++H + +E
Sbjct: 184 PGSKIWYHFLRFRLMPSSHYRLVHKE 203
BLAST of Lag0018078 vs. NCBI nr
Match:
KAE8661093.1 (hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus])
HSP 1 Score: 90.9 bits (224), Expect = 2.0e-14
Identity = 52/175 (29.71%), Postives = 90/175 (51.43%), Query Frame = 0
Query: 118 YDRFVNDFARAKYAELLKRYFLFERGF------NGDLPQFLRTDITDHDWALFCAKPESV 177
+ +F ND A+A++ R FE GF +G + +T W F P SV
Sbjct: 14 WQQFENDEAKARFQNFKNRKLFFELGFIFTKETDGGFGPDVMDIMTPLKWQKFARHPGSV 73
Query: 178 NAQMVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNF--PHGTYNEMVVAPSNE 237
NA +V+EFYANI K + + + VRG ++ ++ +AIN ++LQ+ H T+ E A SN
Sbjct: 74 NASLVKEFYANIFKPNQYSIFVRGKKIRFTSTAINHYFHLQDVVDNHATFEE--EADSN- 133
Query: 238 QLSEAVRKVGIEGVEWQLSKTQKRTFQSAYLKREVNTWMGFIRERMLPTTHDSTI 285
+ + + E EW +T + + L+ W F++ +++PT+H++T+
Sbjct: 134 KYDGVLEDLCFENTEWNGRQTSRYSVNRERLQPRAKLWNHFLKNKLMPTSHNTTV 185
BLAST of Lag0018078 vs. ExPASy TrEMBL
Match:
A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 1.2e-17
Identity = 59/176 (33.52%), Postives = 87/176 (49.43%), Query Frame = 0
Query: 120 RFVNDFARAKYA-ELLKRYFLFERGF-------NGDLPQFLRTDITDHDWALFCAKPESV 179
+F + A +Y + R E+GF G LP F+ IT H+W FCA PE
Sbjct: 24 KFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDP 83
Query: 180 NAQMVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHGTYNEMVVAPSNEQL 239
+VREFYAN+ + V VRGV+V WS AINA++ L + P ++E + + + L
Sbjct: 84 IVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIQNITQQDL 143
Query: 240 SEAVRKVGIEGVEWQLSKTQKRTFQSAYLKREVNTWMGFIRERMLPTTHDSTIFRE 288
+ V G EW +S T + L W F++ R+LPTTH T+ ++
Sbjct: 144 ITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKD 197
BLAST of Lag0018078 vs. ExPASy TrEMBL
Match:
A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 3.5e-17
Identity = 51/157 (32.48%), Postives = 82/157 (52.23%), Query Frame = 0
Query: 134 LKRYFLFERGFNGDLPQFLRTDITDHDWALFCAKPESVNAQMVREFYANIDKEDGFQVIV 193
+++ F+++ + P F+ I H+W LFCA PE +VREFY N+ D V +
Sbjct: 66 VEKEFVWDNSKPLEQPPFIADVIIQHNWQLFCAHPEDPIVPLVREFYTNMTNPDDDTVYI 125
Query: 194 RGVEVDWSPSAINALYNLQNFPHGTYNEMVVAPSNEQLSEAVRKVGIEGVEWQLSKTQKR 253
RGV+V S AIN +++L + P ++E V + +L + V I G EW +S
Sbjct: 126 RGVQVPLSVEAINTIFSLGD-PIDEHSEFVEDITKPELVIVLETVAIVGAEWNVSSQGAY 185
Query: 254 TFQSAYLKREVNTWMGFIRERMLPTTHDSTIFREWIA 291
T + L W F++ R+LPTTH T+ +E ++
Sbjct: 186 TCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKEHVS 221
BLAST of Lag0018078 vs. ExPASy TrEMBL
Match:
A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)
HSP 1 Score: 95.5 bits (236), Expect = 3.9e-16
Identity = 64/197 (32.49%), Postives = 92/197 (46.70%), Query Frame = 0
Query: 91 LKRRAEKGKNIVEASAEHDEIEEQQLPYDRFVNDFARAKYAELLKRYFLFERGFNGDLPQ 150
+KR A K V+ E E + +R +N AE K + L G LP
Sbjct: 3 IKRVARKAHKAVKFETEAAETRYENNIQNRPLN-------AE--KGFVLDNSETMGQLP- 62
Query: 151 FLRTDITDHDWALFCAKPESVNAQMVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYN 210
F+ IT H+W FCA PE +VREFYAN+ V VRGV+V WS AINA++
Sbjct: 63 FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFG 122
Query: 211 LQNFPHGTYNEMVVAPSNEQLSEAVRKVGIEGVEWQLSKTQKRTFQSAYLKREVNTWMGF 270
L + P ++E + + L + V + G EW +S T + L W F
Sbjct: 123 LGD-PVDEHSEFIENITEHDLITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHF 182
Query: 271 IRERMLPTTHDSTIFRE 288
++ +LPTTH T+ ++
Sbjct: 183 LKSHLLPTTHGKTVSKD 188
BLAST of Lag0018078 vs. ExPASy TrEMBL
Match:
W9RK06 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000483 PE=4 SV=1)
HSP 1 Score: 91.7 bits (226), Expect = 5.6e-15
Identity = 56/206 (27.18%), Postives = 98/206 (47.57%), Query Frame = 0
Query: 92 KRRAEKGKNI----------VEASAEHDEIEEQQLPYDRFVNDFARAKYAELLKRYFLFE 151
K +A KGK + + + E+ E+++ P D K A ++R F++
Sbjct: 4 KSKARKGKGVRILIDSDSSESDPATENAEVKKFASPEAEHRFDTCMNKRALHMERGFVYR 63
Query: 152 RGFNGDLPQFLRTDITDHDWALFCAKPESVNAQMVREFYANIDKEDGFQVIVRGVEVDWS 211
RG P F+ + I H W FC P + Q+VRE+ A D + VRG + ++
Sbjct: 64 RGRPSGYPSFIHSVIAAHKWHSFCHNPHAATVQLVREYAAEPD-----TIFVRGQLIPFT 123
Query: 212 PSAINALYNLQNFPHGTYNEMVVAPSNEQLSEAVRKVGIEGVEWQLSKTQKRTFQSAYLK 271
AIN+LY+L + +N + + +QL E + ++ +EG EW+ + TF L+
Sbjct: 124 SEAINSLYDLPDV-EDHFNNFADSLNEDQLDEVINELCVEGTEWRRATRGSMTFPRECLQ 183
Query: 272 REVNTWMGFIRERMLPTTHDSTIFRE 288
W F+R R++P++H + +E
Sbjct: 184 PGSKIWYHFLRFRLMPSSHYRLVHKE 203
BLAST of Lag0018078 vs. ExPASy TrEMBL
Match:
A0A6A2WM54 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116939pilonHSYRG00213 PE=3 SV=1)
HSP 1 Score: 90.9 bits (224), Expect = 9.5e-15
Identity = 52/175 (29.71%), Postives = 90/175 (51.43%), Query Frame = 0
Query: 118 YDRFVNDFARAKYAELLKRYFLFERGF------NGDLPQFLRTDITDHDWALFCAKPESV 177
+ +F ND A+A++ R FE GF +G + +T W F P SV
Sbjct: 14 WQQFENDEAKARFQNFKNRKLFFELGFIFTKETDGGFGPDVMDIMTPLKWQKFARHPGSV 73
Query: 178 NAQMVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNF--PHGTYNEMVVAPSNE 237
NA +V+EFYANI K + + + VRG ++ ++ +AIN ++LQ+ H T+ E A SN
Sbjct: 74 NASLVKEFYANIFKPNQYSIFVRGKKIRFTSTAINHYFHLQDVVDNHATFEE--EADSN- 133
Query: 238 QLSEAVRKVGIEGVEWQLSKTQKRTFQSAYLKREVNTWMGFIRERMLPTTHDSTI 285
+ + + E EW +T + + L+ W F++ +++PT+H++T+
Sbjct: 134 KYDGVLEDLCFENTEWNGRQTSRYSVNRERLQPRAKLWNHFLKNKLMPTSHNTTV 185
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PON46472.1 | 2.5e-17 | 33.52 | hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii] | [more] |
| PON70375.1 | 7.2e-17 | 32.48 | hypothetical protein PanWU01x14_080440 [Parasponia andersonii] | [more] |
| PON35554.1 | 8.0e-16 | 32.49 | hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii] | [more] |
| EXB77427.1 | 1.2e-14 | 27.18 | hypothetical protein L484_000483 [Morus notabilis] | [more] |
| KAE8661093.1 | 2.0e-14 | 29.71 | hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A2P5BCG4 | 1.2e-17 | 33.52 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
| A0A2P5DAQ2 | 3.5e-17 | 32.48 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE... | [more] |
| A0A2P5AGA5 | 3.9e-16 | 32.49 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
| W9RK06 | 5.6e-15 | 27.18 | Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000483 PE=4 SV=1 | [more] |
| A0A6A2WM54 | 9.5e-15 | 29.71 | Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116939pilon... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
