Lag0018070 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0018070
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr5: 15368188 .. 15370823 (-)
RNA-Seq ExpressionLag0018070
SyntenyLag0018070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACTGTATACTTAGCATTGACATGCAGTGCTCGTGTTCAGCAGACAGTGCCAGAGAAATTGACTGATCCAGGGAGTTTTACTATTCCTTGTAATTTTGGTACTTATTCTTGTAGAGCACTATGTGATCTAGGGGCTAGCATAAATATCATTCCATTATCATTGTGCAAAAAGCTAAATATAGGAGAGATAAAATCTACTAATGTTAGGCTCCAGTTGGTTGACCAATCTGTGGTTAGTCTAAGAGGAGTCCCCAAATCAGACCTAATCGCAAAGTATAAATAGACTGAAAATTGGTCGTAGTGTTGTGAAGCTATAGGGGTAGAGTCGCGACGCTACCACGATTTCACAGATTCTAGGATTCTGGACCGAGAGCGTCGTGACGTTGTGACCTTTTCGCGCGTACTCCGAATATAGAATGCCAGCGTCAAGACGCCCAGAGAGCAGCGTCCCGACGCTGTCTCTCAACTGAGCTAAATTTGACTTCTTCCAACTTGAATCTTTTTCGATCTTTAGCCCCTATTCATGTCCCGATCACACAATTAGCTCCGATATTTATTTCCTACAAATAAAACATGAAAATGCATGATTTTGGTCATTTAAATATAAAAGACTAGCTAATTTAATTAGGGAAACTAGCTAGCTATGCTCGCTATCAATAAACCACCACACAATCCGAGACTGGTAGATATCATCATGCTAAATGACTCTGTTAATAATTGTTTTGTGAATAGAGATTTAGAAAGAAAATTTGATTTGTTGGCTTATGGAATGTTGCTCACTAATAATAAAGGACCCAAGAAATGAGTACCAAAATCCTTTGATTGAGCTCTCTTTGTAGGTGTGATTTCAAGAAGCAAATGGTTGTTGGAATTCAAATGAGAAATTAAATCAAATTGAGCAACTATATGACTTCTTGAATTCAAGAAAGGAAAACTACATAGTTGGTAACTTTATATTTTTTGATTATTTAAATAATTATTCTTTTCGTATCTTTATGGAAAGTATATTACATTTGAACGGTTTGAAATGATTTTTTTTAAATTTATTGGTTATTTGATTAATGGGTGAATTGAGATTTTTTTTTTGTTTTTTTTGCATTTATATATCTATGATCGATCATCTTGTGAATTATGAGATTTTTCCTTTTAAATCTTGTGGTCAATTACGTTTGAAATTCATCCTTCGTTCATTTATTTGAATTATAGATGCCATGAGAATATATTGAATATTTATCTATAATTCTTATTATGAAGAATTTGTTCTATCATGATTTCTTGATTTTAATTGTTTATATATAGTATTTCAACTTTCTCTTTTTTTAATGAAATTGATTATAAATTTATTAGATTATGTTTGTTGAGATGAGCTATATGTATCCTTTTTTGAAGTAAAATTTATGTTTTGATGATATTTGCTCTCTTTAAAACATTATGGCTTGAAGAAAAATATTTGATATTTTTTTGGCATAATAGGTTGTCCCATTAAAAAAAAATTATGTGCTTTGTAATAGCTTATGGAAGAGTTATTAAATTATTTTTCTTAAGAGGAGTATTTTTATGAAAATAATTTACACTCTTGATTTCTCTTTGTTATTTACTCAAATTGGTAAAATTTCATCATTTCTAATCTTTTATAGATCTATATAGAAAATTTTTGTGCCTAATCATGAGAATTATATTGCTTTATTGAAATTTTTCATGTCTTATGCATACTCTTCATGAATGAAATTCTCTTATGAAAAATATTTATGATTTGTCTAAGATAGATTGAATTATCATGATATTTTTTGGGAAAAATACACTTTTGGTCCCTGAGGTTTGGGTTAAGTGACACTTTGGTCCATGAGTTTTCAAACTCAACAAAAATACCCCTGAGGTTTGGGATAAGAAGCATTTTGGTCCCTGCCGTCAACTTTTCTGTTAAATTTTAACGGTTGTTGACATGACACTATTATTTTAATAAAAAAATTATTTTTAAAATTTTTTAAATAAAAAAATAATAAAATAAAAAATTATTTTTTTAATTATTTAATTATTTCTCATTCTCTCTCTACTTCCTTTCTTTTCTCCATCTTCTTCCTCTTCATCCTTTCCTTCTTCTTCTTCTTCATATCTCCGGCAGCCGGCGGCCACCACTCGCCGCCGCCGCCGGCGGCCTCCGGCGACTGTTTTTTTTTTCTTTCTTCTTCCTTCCTCTCTATCTCTTCTTCTTCTTCTCCCCATTTTTCTTCTTTTCTTTTTTTTTCTTCTTTCTTCTTCTTCCCTCCATCTTCTTCTTTTCTTTTCTTTCTTCTTTTTTTTGTAATTAAAATAGGGGAGATTTGGGAGTTTCAGTCACTGTCATCGCACGTCGAAGGTCCCATGGTTGTCGGAGAAGCCCAAATCTGCTCGGCGTTCGCATTTGCGGTCGGTGTTCGCGGCGTTCGTGACCCAAATCTGCTCAGTGTTTGCGGCGTTCGTGACCCAAATCTGCTCGGCGTGCTCGGCGTTCACGTTTGCGGTCGGCGTTTGCCGGAGAAACCCAATCTGGACGTTCGCGATGCTCGAGGTAGGCGTTCGCGAGCATCTTCTCCGATAATATCCACGGCTATGCAGCGGCAGTCTTGGTCGACAGTCGGTGTTCTTGGGTAG

mRNA sequence

ATGGAGACTGTATACTTAGCATTGACATGCAGTGCTCGTGTTCAGCAGACAGTGCCAGAGAAATTGACTGATCCAGGGAGTTTTACTATTCCTTGTAATTTTGGGGAGATTTGGGAGTTTCAGTCACTGTCATCGCACGTCGAAGGTCCCATGGTTGTCGGAGAAGCCCAAATCTGCTCGGCGTTCGCATTTGCGGTCGGTGTTCGCGGCGTTCGTGACCCAAATCTGCTCAGTGTTTGCGGCGTTCGTGACCCAAATCTGCTCGGCGTGCTCGGCGTTCACGTTTGCGGTCGGCGTTTGCCGGAGAAACCCAATCTGGACGTTCGCGATGCTCGAGGTAGGCGTTCGCGAGCATCTTCTCCGATAATATCCACGGCTATGCAGCGGCAGTCTTGGTCGACAGTCGGTGTTCTTGGGTAG

Coding sequence (CDS)

ATGGAGACTGTATACTTAGCATTGACATGCAGTGCTCGTGTTCAGCAGACAGTGCCAGAGAAATTGACTGATCCAGGGAGTTTTACTATTCCTTGTAATTTTGGGGAGATTTGGGAGTTTCAGTCACTGTCATCGCACGTCGAAGGTCCCATGGTTGTCGGAGAAGCCCAAATCTGCTCGGCGTTCGCATTTGCGGTCGGTGTTCGCGGCGTTCGTGACCCAAATCTGCTCAGTGTTTGCGGCGTTCGTGACCCAAATCTGCTCGGCGTGCTCGGCGTTCACGTTTGCGGTCGGCGTTTGCCGGAGAAACCCAATCTGGACGTTCGCGATGCTCGAGGTAGGCGTTCGCGAGCATCTTCTCCGATAATATCCACGGCTATGCAGCGGCAGTCTTGGTCGACAGTCGGTGTTCTTGGGTAG

Protein sequence

METVYLALTCSARVQQTVPEKLTDPGSFTIPCNFGEIWEFQSLSSHVEGPMVVGEAQICSAFAFAVGVRGVRDPNLLSVCGVRDPNLLGVLGVHVCGRRLPEKPNLDVRDARGRRSRASSPIISTAMQRQSWSTVGVLG
Homology
[Close]
BLAST of Lag0018070 vs. NCBI nr
Match: XP_022858481.1 (uncharacterized protein LOC111379355 [Olea europaea var. sylvestris])

HSP 1 Score: 54.7 bits (130), Expect = 7.5e-04
Identity = 23/37 (62.16%), Postives = 27/37 (72.97%), Query Frame = 0 

Query: 2   ETVYLALTCSARVQQTVPEKLTDPGSFTIPCNFGEIW 39
           ETV L   CSAR+Q  +P KL DPGSFTIPC  GE++
Sbjct: 97  ETVMLTKECSARIQNKLPPKLKDPGSFTIPCTIGEVY 133

The following BLAST results are available for this feature:
BLAST of Lag0018070 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022858481.17.5e-0462.16uncharacterized protein LOC111379355 [Olea europaea var. sylvestris][more]
BLAST of Lag0018070 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0018070.1Lag0018070.1mRNA