Lag0018056 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0018056
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Gag/pol protein
Location	chr5: 14920342 .. 14930660 (-)
RNA-Seq Expression	Lag0018056
Synteny	Lag0018056

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAAGTTGAGTGAGGATTTTTGTGTGCCTACACGGAAGCATAAGCTTCTCGAAGGTCAACACTGCTTCGTCCTCGATTCTAGTCCTATTGGGAATAGCCCGGGTAGGAGGCTTGTGATTAGTGTGTGAATTAGTAAAACAAATATAAAGGTCTCAAGCAAGTGAAGTTGGTTCTAAGATCCTAAAAAAGTCCCCAAAATGGTCAATAAATCTTACAAGATCACATGACCACATTGAGTGAGGATTTTTCGTGTGCCTACACGGAAGCATAAGCTTCTCGAAGGTCGACACTACTATATCCTCAAATCTAAACCTAATAGGAAAGCCCGGGCAGGAGGCTTGTGAAGGTGTGTGCAACAATAAAATAACCCAAGCAACATATATAATAAGAATAATAATAATAAAATAAAATAAACAATACAAGATAATAAAAATGGCCAAACCCTCGAGATGAAATCTCATGTCCCCAGTGGAGTCGCCAAGCTGTCGCCACGTGCCTGCGACGCGGAGCGGCCGACGTCCTCGAAAAAAGGGTAAAATAACAGGAGTCGCCACCAATCTTTTTTATGGTGTGATTGGACACCAAAATAAGATAAAACTAATATTTTAAGAAAAATAAAAAAAAACGGTCTGCGAAAACCAAATTTGGGTTCGGGAGTTGTTCGTGTATGGGGAAGGTGTTAGCACCCCACAACACCCGTTAAAGAAACGGTGGCCAAAATTTTATCTTGAATTGAAATTAATTTTAGAAGAATATATTATTTGGAGAAAAGATATTTTTTTAAAACAAATGTCTTATTTTACCCCTCATTACCCCAATATTTGAAGTAATGATCCCATAAAATAAGTGGAAAGATTCCATTGATTTTGCTCTCTTAGAATTAAAATTCTCACCTCAAGAATATTAGAGAATTTTACAATTCCCTAATTCCGTCATAGGATAGCATTTCTCAAGGGAAAGATTTTTTTAAAACATTTTTTTTAATTAAATTCATTTTTTCTTGGGATCAAAATCTCGGACTCCCAAAGATTAAGATCCCTCACCTTAGGAACTCTAGAAAATCAGACTCCCAAATATTTCTAGATTCCATCATAGGATTTTTTTAGGGAAAACGGTCTTAAAAATCAAATTTAAGAAAATATTATAAAAAAACCCTTTTAAAAATAACAATTTTTTTAGTTAAAGCTTTATAAGCTCAAAAAGAACAAAAATATTAGGAAATTAGAAAATAAGTTTGAAAATAAATTAAAAATAAATAAAAATGAAAACTTGAGAAAAGGAAATTTGAAAACATTTAACAAAAATATATATAATACGCAACATTTATATAAGCACAAAATTGCAATATTTTGATACAAGTAAATTAACATAATAATTAAGGCCATAAATAAATATGCAAGTACAACATATTAAACATGTTGAATTTTAATAAAAATATATTGGAATCGATCTCGGACTCCCAAAGAATCGACTCCTCACCTCAGGAAAACTAGAAAATCGGACTTCCAAATATTTCTAGATTCCGTCGTCGGATAAACTTTGTAATAAAATAAAGTATGGATTAAAAATTAGAACCATAATGCATTTACAATACAAAATGAACATATATATATGTATATTAAAAGGAAAAAAAAGCTTGGTCAATAAATTAAAATATTTTACTCACAAAATTCACACAAACATGCTAGTAAAAATAAAATCCAATCAAATGGAAAAAATAGAATTAAGACATATGGAAAAAATAGAATTAAGACATGTTAAAATAGATACAATTAGATAAAAGAAATGTTAAATAAGAAGCCACAAGATCAAATAGTAAAATGAAGGGAAACTAAAATGAAAAATAAGTAGAATAAATAAATACTGCAAAAGAAAAATATATATAAATAATTAAAAGAAAAAAAACAGATACAGATATAAAGTAAAGTAAAAAAAAAGAATAACATAAATAAAATAAAAATAATAAAAGAAGGGAAATAGGCGGCAAAATTGCCGCCCATTCTGTGGGCACATGACAACACCTTAAAAAAAAGCAAAAAAAATAAAAATTAAACTCTACTCAGCAAACTCATGCATATATATAAATAATAATAATAATAATAATAATAATAATAATAAATACAGTAAAACAGAATACATTTTAAAAAAAAACATCTTCCCTTTTTTTTTTCACTCTTTCTTTCTCTCTCAAATTCACTGTATTTTATTTTTCTCTCATTTTCATTTTTATAGTTTTAACCTCAACCAAAGCTCCACAATCTTCTTTTTTTTTTTTAGCCATTTTCTTCATTACACAATTTGGTAAATAGAGCAATAAGAACGAAAACTAGAAAAATAAAAATAAAGAAAGGGGAATGATATGAACAAAAAAGAAGAAAAACAAGAGGAAGATAAAAACTTACATCACAACATAAAAAAAATAGAAGTAAGAAACAATAATAAAGGAGCTTGCAATACCCTTACTCAACTATAGTTTTTCAAGGTGCTCAAGAAAAGAAAAAAAAAGTGTAAGAGACGAAATCAAGAACAATAAAATACCCGCTTGTTGCTTGAGGTGCGGATCCTTGGGACAAAAAACCCTACCAAATGCAACCTCCAACTAAGATGGATTTTCTTCTATGCTCTAGATTTTGGATTTTTTTTTGTGTGGTGAGTGAACTCTTTTTTTCCCTAGGGTTTTTTTTGGTTGAATGAACTCCTTCTCAAGCTCAACAAGAAGGGTTTATATAAGCTAAAACCCATTCCTCTTTTGTGCATAAAATTTACTAGCTACTTTTCAAATTTTGAAATCCAATGCCAAATATAAGCTTTGCTCAAAATGGAATGCAACTTTTTGTAAACCAATTCAAAATTCAAAAAAAATTGCTTCTTTGATCTCTTGGCAATTAAACCAACTAAATTGGTTACTCTAACCAAACTAGGAAGAAGAGACCAAATGGCATAAACAAACATTTCTAATTAAATCAAAATTTCAAACATAATTATGTATTTTAATGATTAATTAACAAATAATTTAATAAGCCGGGCAAAAATAGGTGGCTACATTAGTTTGGTGATATTTGTTAAATTTTTTTGTTTGAGGTGGAATGAGTTGAGAACTTGAATTATGGGTTTAGTGGGGGAGGGGTTGAAAAATGCTTGAGTTATTGTGTTAGTTGGAATATTTATGGAATATTCCAACATAAACACTGATGCATTAATCTGATTCTTTGTTCTTTTGAACTTTAGTGGGTCGGTTAATTTTATTTGCTGCAACATCTACTTTTGAGTGTTGAAATGCAAGTATTTCTTTTATTAACACAGTAGAAGATGTGAGCCTTGTGTGTGTGAGTTAAATGCAAGTTGAGTAGCTTGTTTGTTTCTTGAAATTGCCTCCAATACGCATTTTTGACAGATTGTACTTCTCTCGCTGATAAGTAAGAATCTTCTAACTAACCCTTATTACAGATTAAAAATTGATTCATTTAAGAAATAGCTAAAACTTAAGTTTGTGTGTTTGTGTATCAAATAAAAGCAATCATCTAACTAACCATTTTGCTTTCTTCCTTGTTTTTTTTTACTCATTTTGATCTTGTTTTGGAAACTCGTTCAATGTATGGAGTAACTAATGGGGGGTATTACAGAATAACAAGCATTGGATCAGTAAGGATATTGGCGAAAGAGGTAATTCGAATTCATCTTTGACTGACTCTTTCTTATCTCCTGTGCTAATGGAAGCAAGGATATCAGAATTAGGGCTCAAATTGAGGCCTCATTATTTTTTATTATTGTATGTTTCTGTTATTTGCTTGGGTGATTCGATCGAAGCTCAGCTAATTTCTGTAATGAGTCCATTCAACTGGTTGTTCTTCCTATTATGAAGGCTAGATTTACGTTGCCATGTTATAATTTTTGCTTTGAATTTTTGTACTCCTCTAAATGTTACTCTTAACGATTGTCAATTAATATGTTCTTTACTCAAGACTGATGTGTTTGTTTGACTTTGCAGCTTTGCAAATTGGTTCTTTTAGGTTGTCGAGTCGGCCTAATGTTCCAGCTTCATCTGTGAATTATTCCCAGAGACGATGCTCTCTAGAGCGGCCTCTACATGTCGAACCAAAACAGAATGATTTCGTTGCTCCTTTAGCTGCAACCTCCATTGTCCCCGATGGATCTTCATTCTCTGAATTCATATTACGCATTCTTGATGGTTTTACGAGGGATTTTGAGAAGGAATATGGTTTTGGTGATAAAATTGATGTCTTTATACATTCGTTGCAGGGGCTGTTGAGGAAGTGGAGGTTGAGGACTATGAGGCATTAGCTAAAGACCTTGAAAATGCTTCCCCCTTGAAATTATGGACTTGAGAAATTTGACAATGATATTGAAGGGAATAAAAGTCCCCACGCAGCGGAAGCGCATCGATTGGACCTTACGCCGTATATCAATTAACATTAAAATATCGTTACGAAAACTCAATTAAACTTTAAAACCCTTTTAAAGCTGCTGGAAAATTGGTTTAAACACGCTTAAAAATAAATCTAAATTTATTTTCATGCTTTTCTAAAGAAAAGGGGAAAAACCGTCACATACCTTCGTTGTAGACTTGACCGTTCTTCGCCAACGACGCTCCAACGAACGAAAACGCAGCAGCCTCCTCGCCTCTTGATAGCTGGAATTTTCTTCTTGATCGACACAATAACCACAGAGGTTACACCAGTATGTCTCTAAGTCTAGGAAGCAAAAGACTTGTGGGAGTCTTTCTATAAGAGGGAGGCTAGAGAGAATTCTAGGTCTTGTCTTTCAAGAGTATCAAGTGTCATGACCAATTAGGTATAGTGTTCTATTTATAGAAGAGAGGCCATGAATAAAATATTCAATTAAATCAATCTTTTCCAAAATTGATTCAATCTTATTCCTTAATTAATCAATCATGATCAATCAATTCCATAATTGATTAATCTTTTCCACAAATGACTAATTACTTCCATAAGTGATTAGATCATTTCCATAAATGATTAATCACCTCCTTAAGTGATTAATTATTTCCATAATTGATTAATTCCCGATTAATGAATTCTTTAATTAATTAACCACCAATTAAATATCACATATTTAATTCCCAGCCTAGAATTAATTAATTTGCCCAAACACATTTTAGGCCTTAAATTAATTAATTTATTATTTTGAACTCTTTCAAACTTCCATAAATTTATATTTGAACTTTTCAAATATTAATTTCTCTCATAATAATATATCAATATATATTATATTTGTTTCCCTTAATAAATTGAACATTTTCAATTTACTTTTATTACTTAGTTGCCTCAAATTACTTTACGAGCTACCAGTGGGACCTAATGGACCTGCAGATCAGAAGCTCCAACGATGTGAGATTAATTGGTCAAACTCATTAACCACATTAATCAATATTCGTTAACTGTGTGTACATTCCACTATAGACTCACAGTTGCACTCTTCTCACTGCAGACATATTTTTTGTGTCCACGGATCTAGACCAATATCGACTAGTTAGTCCTTCACGAGTGTCCGTAACACCAGCTGGGTCAAATTACCGTTTTACCCCTAGGTTACCTCTATTTCCTTAAGTACCAATTCTCCTCTAATGAACAACCTGTTTGTGGTCCAACCATCAAACAGAAAACCCTCTCGTGCCATTGAGAGGGTAGGGCCCTTTGTTCAAGACTCGGAGTAACCACTTAAGGGAACACTCATCTGCTTCCCTAAAGTCGGGAAGGAGTGAATTCCATCTTGTACGATTATGTTCCCAGCTCCCCATTCGGTCTTGTCCCCAAAGTGGTAGGCTTATTGAGTCGGCGTATTGGCCACTCTTACCCATACAAATCAAAGGACAATCTCTCATGAGCAGGAGTCCATAATCAACTCAGGATTAAGACTAAGTTGTCTAGGTCGTCCTAGTGAAATAGAAAACCAACTAGTTAACGGTGTTATAACCAGTGGTTACTATTTCACGGTCCGGTCTTATGCATACTCATTGCATGTCTCCTACACGAACGCGTTGGATCGCAGCGTTTGTATCAAATACAAAGTAGGAATGATGTAGACGACAAGAAGATCAACAAGAATAAAGTAGCTTTCCTCGTACTTTATGTAGACGACATCCTACTCATTGGGAATGATGTAGGGTATCTGTCTGACGTAAAAGAATGGCTAGCAGCTCAATTCCAAATGAAAGATTTGGGTGAGGCCCAGTATGTTCTTGGCATCCAGATTATTCGGGATAGAAAGAACAAATCGCTAGCTCTGTCTCAGGCAACGTATATCGACAAGATGTTGGCTCGATATTCGATGCAGAACTCCAAGAAGGGCTTGTTGCCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTCTCCTAAGACACCTCAAGAGGTTGAGGATATGAGACGGATTCCCTACGCCTCTGCCGTGGGTAGCTTAATGTATGCCATGCTATGCACGAGGCCTGACATTTGTTATGCTGTAGGGATTGTCAGCAGATATCAGTCGAATCCAGGGTTAGACCACTGGACCGCCGTTAAAGGAATCCTCAAGTATCTTAGGAGAACGAGAGATTACATGTTGGTGTTTGGGGCTAAGGAGTTAGTTCTCACTGGTTACACCGACTCTGACTTCCAAACTGACAAGGATTCTAGGAAATCTACGTCAGGGTCAGTTTTCACCCTTAATGGTGGAGCTGTAGTTTGGAGGAGTATAAAGCAAGGGTGCATAGCAGACTCCACGATGGAGGCTGAGTATGTAGCTGCTTGTGAAGCCGCTAAGGAAGCTGTTTGGCTAAGGAAGTTCTTGACAGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATTACGTTATACTGTGACAACAGTGGGGCTGTAGCCAATTCAAAGGAACCTCGCAGCCACAAAAGAGGTAAACACATAGAGAGGAAGTATCATCTGATTCGTGAGATTGTGCAAAGAGGAGATGTGGTCGTGACCAAGATCGCTTCCGAGCACAACATTGCTGATCCGTTTACGAAGGCCCTCTCGGCTAAAGTGTTCAAAGGTCATCTAGAAAGTCTAGGTCTGCGAGATATGTATATAGCGTAATCTAGGGCAAGTGGGAGATGTGTAATGGGTGCAATGGCCTACAGGTAACACATCTAAGAAGCAACGTTATCAAAACCAATTTGGTAAAGTTAATGAATGGATGTGTACTCATGATTCTTATTATTTTAAAACTTTATGCAGCTTTTGATCCCTTGATTAGCTCACTCCGATACGAGGGAGATGAGGTGAACAAACCTTAGCAAAATCAGAGGCCAAAATACTCCATGAGAAGATAACAGAGAAGGAATACAATCATGACGAACTAATTAGAATTCTAACGACAAGGAGCAAAGCACAATTACTTGCAACACTTAACCACTACAATAACGAGTATGGCAATGTCATCAACAAGGTACATTTGTACACATTTACCATAAGCACAACCATTTCAAGATTTGAGTATTAATTTTGATTTTCCTGCTTTGCTTTCATGTAGAAGCCCTGCATTTCTATAGACTACTTTAAGTACATGCATCAGCAGAAGAGAAGAGTCTGGGATTCTCTTTTGAATCAGTATATTACCCCTAACCAGAAATGCCATGGGGAAGTAAAGTAAATACTATACACAATTCTCGTTGTGGTGGCATCAGTTTGTTCATTTGGCGCCAATTTTTCTTTTTTGTTTGGTCAATTGATATTAGTCCAATGAATATACTTGGGGCATGATTCTTTTACCATTTACAAATCAATTTGAGATTAGTTTCTGCCAGTGAAAAGAGAGAGAAGATGAAAATTTACCTTTTTACACCGAACATGCTCCAAGTACTTCTAAAGAAACATGTAATAATTGGACTGCTCTAAACTTTCTTCACTATATTTGAAGAATTTAGATTGGTTGATACACATTTTTGTACAATATTCATTCTTAACATTCCTGTTTCTTCAATTTCTAGAAGATGCGAAAGTATTCTGCTGGGGGTGGAACAAGTATGGCCAGGTATGTTGGTTTAATTGCTTGTTTGCTTTTCTTTAAAATATTATCACAACAATTCTGTAGTTTCTCATTGCCATATGCATAAATGCATTTTATAAGTTGTTTCCCAAGATCACATCTGATATTGAGGTTCTTAGAAGTCTTCATTTACACTCTGCAGCTAGGTTTGGGCGATATAATTGTGTTCTTCATAGTTCTAAGTTTTTTTCCTATGTTCTAAGTAAAGAAAGCTTCTCTTCTTAACTCTTTAAGTAAAGTAGTTATTGTTTATGGACAAAGGAAATGCAGAGATTTCAATGTGTTGTTTGTTTATTGATTTAGACAAGCAGATTGTGACACAAAAATTACCTATCAACTTTAGTAGGGTGGTGTTGCTAGATTTATAACTTTCATACGGGTCGTTTTTGTTGTGATTTGTTTAATAATCCTCTAGATGTTGTTGGTTATTAGCTCTACTTTACTCGTATGTCTTGAGCTTTACTTTTAGTTTAAGGATTTGATTGGATGTAATGAACTTTAGTAGGGTGGTGTTGCTAGATTTATAACTTTCATACAGGTCGTTTTTGTTGTGATTTGTTTGATAATCCTCTAGATGTTGTTGGTTATTAGCTCTACTTTACTCGTATGTCTTGAGCTTTACTTTTAGTTTAAGGATTTGATTGGAGATGTGTGTCGATTGTATTTAACTTACGTTATTGCTTTGTATAAGGTTTGGAATTCATCTTGCTAAGCAATAATTGTTGCAGATGATAAATGGATATATTCTCGAAAAGGAGCTCGAAGAGGAACTTGCGAAAGAGCGTTTAAGGAGTTGTGTACTTATTTTGTAGTAATTTTACCTTTTCTTTGTAAATTAGTTCATGGACGTGATTTGTGGATGGACGAAAAGTTTCATGTATTATATACACTATTATATTTTATTAATTAAATCCATGTTCGTTGAGTTAGTTGTTGTGTATAAATATTTTCAGGATTTTATTTTGTGTATAGGTTGAAATTTTATTTTGTTTAATGTTTACAGGTTTTTACAAAAGGAAGAAATAGTATTGTTGGTTAGCTACTTGTGCAACCAACAATTTTTTTTTTAAATTTAATATTGCACATTTAATGTCGGACACTTTTAATGTCGCACATTTAATGCCAGACACTTTTAATGTCACAGCTTTTAATGTATAAAAAATTGACCGCTTTTAATGTCGGTCAAAGACTGGTTGACTGACATTAAAAGTACACTTTTAATGTCGGGCATTGACTTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGTACATTTGACCGAACATTAATAAAGTGATGTATTATTCAATGTTTGTATTATATCTTGTCTTGTTAACCCTAATCCAATAAACTAAACATCCATGGCTAATAGAATGAGTCTTGAACTAGTATGTAGGGACATACGGGGATCAATGTTCAAGTTTTTAGCCTAAAGGGTCTGTAGTATAGGGATAAGGTTGGGTACCTTATCCTGGTGACACTATGGATACGGCCCGCTTTGTATATTGATACAAACGTAGTGATCCAACGCGTTCATGTGGTTGACATGCGAGTGGGGGTATCCTGTGCAATGAGTTTGCACAAAGACCGGACCGCGAAATAGTTAACCACTAACTGTAACACCGTTAGTTAGTTTGGTTTCTATTTCACTAGGATGACCTAGGCAACTTGGCCTTAATCCTGAGTGGATTATGGACTCCTGTCCATGAGGGATTGTCCTTTGATTTGTACGGGTGAGAGTGGCCTGTTCGCCGACTCAATAAGCCTACCATTTTGGGGACAAGACCAAGTGGGGAGCTGGGAACGTAGTCTTACAAGATGGAATTCACTCCTTCCTGATATGAGGGTAAGTAGAGGTGTGTTCCCTTAAGTGGTGTCTCCGGGTCTTGAACAATGGGCCCTACCCTCTTTATGGCATGAGAGGGATTTCTGTTTGTTGGTTGGACCACAAACAGATTGTTCATTAGAGGAGCACTGGTACTTAAGGATCAAGAGGTAGCCCAGGGGTAAAACGGTAATTTGACCTAGTTGGGGTACGAACACACGTGAAGGGCTAACTCGCTGTTGACGGTCGATATCCGTGGACACAGAAATATATCTGCAGTGAGAAGAGTGCAGCTGTGATTCTTTAGTGGAGTGAACCACAGTTAACGAATATTGATTAACTTGGTTAATGAGTTTAGTCAACTAATCTCATATCGTTGGAGCTTCTGATCTGCAGGTCCATTAGGTCCCACCGGTAGCTCACTAGGGGCGTTGAGGTAA

mRNA sequence

ATGACCAAGTTGAGTGAGGATTTTTGTGTGCCTACACGGAAGCATAAGCTTCTCGAAGGTCAACACTGCTTCGTCCTCGATTCTAGTCCTATTGGGAATAGCCCGGCTTTGCAAATTGGTTCTTTTAGGTTGTCGAGTCGGCCTAATGTTCCAGCTTCATCTGTGAATTATTCCCAGAGACGATGCTCTCTAGAGCGGCCTCTACATGTCGAACCAAAACAGAATGATTTCGTTGCTCCTTTAGCTGCAACCTCCATTGTCCCCGATGGATCTTCATTCTCTGAATTCATATTACGCATTCTTGATGGTTTTACGAGGGATTTTGAGAAGGAATATGGTTTTGGTGATAAAATTGATGTCTTTATACATTCGTTGCAGGGGCTGTTGAGGAAGTGGAGACTTGACCGTTCTTCGCCAACGACGCTCCAACGAACGAAAACGCAGCAGCCTCCTCGCCTCTTGATAGCTGGAATTTTCTTCTTGATCGACACAATAACCACAGAGGTTACACCACGTTTGTATCAAATACAAAGTAGGAATGATGTAGACGACAAGAAGATCAACAAGAATAAAGTAGCTTTCCTCGTACTTTATGTAGACGACATCCTACTCATTGGGAATGATGTAGGGTATCTGTCTGACGTAAAAGAATGGCTAGCAGCTCAATTCCAAATGAAAGATTTGGGTGAGGCCCAGTATGTTCTTGGCATCCAGATTATTCGGGATAGAAAGAACAAATCGCTAGCTCTGTCTCAGGCAACGTATATCGACAAGATGTTGGCTCGATATTCGATGCAGAACTCCAAGAAGGGCTTGTTGCCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTCTCCTAAGACACCTCAAGAGGTTGAGGATATGAGACGGATTCCCTACGCCTCTGCCGTGGGTAGCTTAATGTATGCCATGCTATGCACGAGGCCTGACATTTGTTATGCTGTAGGGATTGTCAGCAGATATCAGTCGAATCCAGGGTTAGACCACTGGACCGCCGTTAAAGGAATCCTCAAGTATCTTAGGAGAACGAGAGATTACATGTTGGTGTTTGGGGCTAAGGAGTTAGTTCTCACTGGTTACACCGACTCTGACTTCCAAACTGACAAGGATTCTAGGAAATCTACGTCAGGGTCAGTTTTCACCCTTAATGGTGGAGCTGTAGTTTGGAGGAGTATAAAGCAAGGGTGCATAGCAGACTCCACGATGGAGGCTGAGTATGTAGCTGCTTGTGAAGCCGCTAAGGAAGCTGTTTGGCTAAGGAAGTTCTTGACAGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATTACGTTATACTGTGACAACAGTGGGGCTGTAGCCAATTCAAAGGAACCTCGCAGCCACAAAAGAGGTAAACACATAGAGAGGAAGTATCATCTGATTCGTGAGATTGTGCAAAGAGGAGATGTGGTCGTGACCAAGATCGCTTCCGAGCACAACATTGCTGATCCGTTTACGAAGGCCCTCTCGGCTAAAGTGTTCAAAGGTCATCTAGAAAGTCTAGAGGCCAAAATACTCCATGAGAAGATAACAGAGAAGGAATACAATCATGACGAACTAATTAGAATTCTAACGACAAGGAGCAAAGCACAATTACTTGCAACACTTAACCACTACAATAACGAGTATGGCAATGTCATCAACAAGAAGCCCTGCATTTCTATAGACTACTTTAAGTACATGCATCAGCAGAAGAGAAGAGTCTGGGATTCTCTTTTGAATCAGTATATTACCCCTAACCAGAAATGCCATGGGGAAAAGATGCGAAAGTATTCTGCTGGGGGTGGAACAAGTATGGCCAGGGATTGTCCTTTGATTTGTACGGGTGAGAGTGGCCTGTTCGCCGACTCAATAAGCCTACCATTTTGGGGACAAGACCAAGTGGGGAGCTGGGAACGTAGTCTTACAAGATGGAATTCACTCCTTCCTGATATGAGGGTAAGTAGAGGTCCATTAGGTCCCACCGGTAGCTCACTAGGGGCGTTGAGGTAA

Coding sequence (CDS)

ATGACCAAGTTGAGTGAGGATTTTTGTGTGCCTACACGGAAGCATAAGCTTCTCGAAGGTCAACACTGCTTCGTCCTCGATTCTAGTCCTATTGGGAATAGCCCGGCTTTGCAAATTGGTTCTTTTAGGTTGTCGAGTCGGCCTAATGTTCCAGCTTCATCTGTGAATTATTCCCAGAGACGATGCTCTCTAGAGCGGCCTCTACATGTCGAACCAAAACAGAATGATTTCGTTGCTCCTTTAGCTGCAACCTCCATTGTCCCCGATGGATCTTCATTCTCTGAATTCATATTACGCATTCTTGATGGTTTTACGAGGGATTTTGAGAAGGAATATGGTTTTGGTGATAAAATTGATGTCTTTATACATTCGTTGCAGGGGCTGTTGAGGAAGTGGAGACTTGACCGTTCTTCGCCAACGACGCTCCAACGAACGAAAACGCAGCAGCCTCCTCGCCTCTTGATAGCTGGAATTTTCTTCTTGATCGACACAATAACCACAGAGGTTACACCACGTTTGTATCAAATACAAAGTAGGAATGATGTAGACGACAAGAAGATCAACAAGAATAAAGTAGCTTTCCTCGTACTTTATGTAGACGACATCCTACTCATTGGGAATGATGTAGGGTATCTGTCTGACGTAAAAGAATGGCTAGCAGCTCAATTCCAAATGAAAGATTTGGGTGAGGCCCAGTATGTTCTTGGCATCCAGATTATTCGGGATAGAAAGAACAAATCGCTAGCTCTGTCTCAGGCAACGTATATCGACAAGATGTTGGCTCGATATTCGATGCAGAACTCCAAGAAGGGCTTGTTGCCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTCTCCTAAGACACCTCAAGAGGTTGAGGATATGAGACGGATTCCCTACGCCTCTGCCGTGGGTAGCTTAATGTATGCCATGCTATGCACGAGGCCTGACATTTGTTATGCTGTAGGGATTGTCAGCAGATATCAGTCGAATCCAGGGTTAGACCACTGGACCGCCGTTAAAGGAATCCTCAAGTATCTTAGGAGAACGAGAGATTACATGTTGGTGTTTGGGGCTAAGGAGTTAGTTCTCACTGGTTACACCGACTCTGACTTCCAAACTGACAAGGATTCTAGGAAATCTACGTCAGGGTCAGTTTTCACCCTTAATGGTGGAGCTGTAGTTTGGAGGAGTATAAAGCAAGGGTGCATAGCAGACTCCACGATGGAGGCTGAGTATGTAGCTGCTTGTGAAGCCGCTAAGGAAGCTGTTTGGCTAAGGAAGTTCTTGACAGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATTACGTTATACTGTGACAACAGTGGGGCTGTAGCCAATTCAAAGGAACCTCGCAGCCACAAAAGAGGTAAACACATAGAGAGGAAGTATCATCTGATTCGTGAGATTGTGCAAAGAGGAGATGTGGTCGTGACCAAGATCGCTTCCGAGCACAACATTGCTGATCCGTTTACGAAGGCCCTCTCGGCTAAAGTGTTCAAAGGTCATCTAGAAAGTCTAGAGGCCAAAATACTCCATGAGAAGATAACAGAGAAGGAATACAATCATGACGAACTAATTAGAATTCTAACGACAAGGAGCAAAGCACAATTACTTGCAACACTTAACCACTACAATAACGAGTATGGCAATGTCATCAACAAGAAGCCCTGCATTTCTATAGACTACTTTAAGTACATGCATCAGCAGAAGAGAAGAGTCTGGGATTCTCTTTTGAATCAGTATATTACCCCTAACCAGAAATGCCATGGGGAAAAGATGCGAAAGTATTCTGCTGGGGGTGGAACAAGTATGGCCAGGGATTGTCCTTTGATTTGTACGGGTGAGAGTGGCCTGTTCGCCGACTCAATAAGCCTACCATTTTGGGGACAAGACCAAGTGGGGAGCTGGGAACGTAGTCTTACAAGATGGAATTCACTCCTTCCTGATATGAGGGTAAGTAGAGGTCCATTAGGTCCCACCGGTAGCTCACTAGGGGCGTTGAGGTAA

Protein sequence

MTKLSEDFCVPTRKHKLLEGQHCFVLDSSPIGNSPALQIGSFRLSSRPNVPASSVNYSQRRCSLERPLHVEPKQNDFVAPLAATSIVPDGSSFSEFILRILDGFTRDFEKEYGFGDKIDVFIHSLQGLLRKWRLDRSSPTTLQRTKTQQPPRLLIAGIFFLIDTITTEVTPRLYQIQSRNDVDDKKINKNKVAFLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRKNKSLALSQATYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDYMLVFGAKELVLTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVVVTKIASEHNIADPFTKALSAKVFKGHLESLEAKILHEKITEKEYNHDELIRILTTRSKAQLLATLNHYNNEYGNVINKKPCISIDYFKYMHQQKRRVWDSLLNQYITPNQKCHGEKMRKYSAGGGTSMARDCPLICTGESGLFADSISLPFWGQDQVGSWERSLTRWNSLLPDMRVSRGPLGPTGSSLGALR

Homology

[Close]

BLAST of Lag0018056 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 638.6 bits (1646), Expect = 5.9e-179
Identity = 316/332 (95.18%), Postives = 326/332 (98.19%), Query Frame = 0


Query: 185  KKINKNKVAFLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRK 244
            KKINK KVAFLVLYVDDILLIGNDVGYL+DVK WLAAQFQMKDLGEAQYVLGIQIIRDRK
Sbjct: 896  KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRK 955

Query: 245  NKSLALSQATYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 304
            NK+LALSQATYIDK+L RYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA
Sbjct: 956  NKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 1015

Query: 305  VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDYMLVFGAKELV 364
            VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVK +LKYLRRTRDYMLV+GAK+L+
Sbjct: 1016 VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLI 1075

Query: 365  LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 424
            LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Sbjct: 1076 LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 1135

Query: 425  VWLRKFLTDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 484
            VWLRKFL DLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
Sbjct: 1136 VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 1195

Query: 485  VVVTKIASEHNIADPFTKALSAKVFKGHLESL 517
            V+VTKIASEHNIADPFTK L+AKVF+GHLESL
Sbjct: 1196 VIVTKIASEHNIADPFTKTLTAKVFEGHLESL 1227

[Close]

BLAST of Lag0018056 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 638.3 bits (1645), Expect = 7.7e-179
Identity = 318/348 (91.38%), Postives = 335/348 (96.26%), Query Frame = 0


Query: 185  KKINKNKVAFLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRK 244
            KKINK KVAFLVLYVDDILLIGNDVGYL+DVK WLAAQFQMKDLGEAQYVLGIQIIRDRK
Sbjct: 770  KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRK 829

Query: 245  NKSLALSQATYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 304
            NK+LALSQATYIDK+L RYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA
Sbjct: 830  NKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 889

Query: 305  VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDYMLVFGAKELV 364
            VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVK +LKYLRRTRDYMLV+GAK+L+
Sbjct: 890  VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLI 949

Query: 365  LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 424
            LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Sbjct: 950  LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 1009

Query: 425  VWLRKFLTDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 484
            VWLRKFL DLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
Sbjct: 1010 VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 1069

Query: 485  VVVTKIASEHNIADPFTKALSAKVFKGHLESLEAKILHEKI-TEKEYN 532
            V+VTKIASEHNIADPFTK L+AKVF+GHLESL  + ++ ++ T+  Y+
Sbjct: 1070 VIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIRLPTQYSYH 1117

[Close]

BLAST of Lag0018056 vs. NCBI nr
Match: KAA0061170.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 632.5 bits (1630), Expect = 4.2e-177
Identity = 314/332 (94.58%), Postives = 323/332 (97.29%), Query Frame = 0


Query: 185 KKINKNKVAFLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRK 244
           KKINK KVAFLVLYVDDILLIGND GYL+DVK WLAAQFQMKDLGEAQYVLGIQIIRDRK
Sbjct: 57  KKINKGKVAFLVLYVDDILLIGNDAGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRK 116

Query: 245 NKSLALSQATYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 304
           NK+LALSQATYIDK+L RYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA
Sbjct: 117 NKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 176

Query: 305 VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDYMLVFGAKELV 364
           VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT VK ILKYLRRTRDYMLV+GAK+L+
Sbjct: 177 VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLI 236

Query: 365 LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 424
           LTGYTDSDFQTDKDSRKSTSGSVFTLN GAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Sbjct: 237 LTGYTDSDFQTDKDSRKSTSGSVFTLNEGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 296

Query: 425 VWLRKFLTDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 484
           VWLRKFL DLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
Sbjct: 297 VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 356

Query: 485 VVVTKIASEHNIADPFTKALSAKVFKGHLESL 517
           V+VTKIASEHNIADPFTK L+AKVF+GHLESL
Sbjct: 357 VIVTKIASEHNIADPFTKILTAKVFEGHLESL 388

[Close]

BLAST of Lag0018056 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 631.3 bits (1627), Expect = 9.4e-177
Identity = 313/332 (94.28%), Postives = 324/332 (97.59%), Query Frame = 0


Query: 185  KKINKNKVAFLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRK 244
            KKINK KVAFLVLYVDDILLIGNDVGYL+DVK WLAAQFQMKDLGE QYVLGIQIIRDRK
Sbjct: 896  KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRK 955

Query: 245  NKSLALSQATYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 304
            NK+LALSQATYIDK+L RYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA
Sbjct: 956  NKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 1015

Query: 305  VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDYMLVFGAKELV 364
            VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVK ILKYLRRTRDYMLV+GAK+L+
Sbjct: 1016 VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLI 1075

Query: 365  LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 424
            LTGYT+SDFQTDKDSRKSTS SVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Sbjct: 1076 LTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 1135

Query: 425  VWLRKFLTDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 484
            VWL+KFL DLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
Sbjct: 1136 VWLKKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 1195

Query: 485  VVVTKIASEHNIADPFTKALSAKVFKGHLESL 517
            V+VTKIASEHNIADPFTK L+AKVF+GHLESL
Sbjct: 1196 VIVTKIASEHNIADPFTKTLTAKVFEGHLESL 1227

[Close]

BLAST of Lag0018056 vs. NCBI nr
Match: TYK05792.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 615.1 bits (1585), Expect = 7.0e-172
Identity = 326/477 (68.34%), Postives = 347/477 (72.75%), Query Frame = 0


Query: 185 KKINKNKVAFLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRK 244
           KKINK KVAFLVLYVDDILLIGNDVGYL+DVK WLAAQFQMKDL +AQYVL IQIIRDRK
Sbjct: 228 KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLRKAQYVLEIQIIRDRK 287

Query: 245 NKSLALSQATYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 304
           NK+LALSQATYIDKML RYSMQNSKKGLLPFRHGVHLSK+Q  KTPQEVEDMR IPYAS 
Sbjct: 288 NKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKKQCHKTPQEVEDMRCIPYASV 347

Query: 305 VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDYMLVFGAKELV 364
           VGSLMY ML TRPDICYAVGI +RYQSNP LDHWT VK ILKYLRRTRDYMLV+GAK+L+
Sbjct: 348 VGSLMYVMLYTRPDICYAVGIFNRYQSNPRLDHWTVVKIILKYLRRTRDYMLVYGAKDLI 407

Query: 365 LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 424
           LTGYT+SDFQTDKDSRK T GSVFTLNG A+VWRSIKQGCIADSTM+A+YVAACEAAK+A
Sbjct: 408 LTGYTNSDFQTDKDSRKYTLGSVFTLNGEAIVWRSIKQGCIADSTMKAKYVAACEAAKKA 467

Query: 425 VWLRKFLTDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 484
           VWLRKFL DLEVVPNMNLPITLYCDNSGAVA+SKEPRSHKRGKHI RKYHLIREIVQRGD
Sbjct: 468 VWLRKFLHDLEVVPNMNLPITLYCDNSGAVADSKEPRSHKRGKHIARKYHLIREIVQRGD 527

Query: 485 VVVTKIASEHNIADPFTKALSAKVFKGHLESLEAKILHEKITEKEYNHDELIRILTTRSK 544
           V+VTKIA EHNIA+PFTK L AKVF+GH ESL                            
Sbjct: 528 VIVTKIALEHNIANPFTKTLRAKVFEGHPESL---------------------------- 587

Query: 545 AQLLATLNHYNNEYGNVINKKPCISIDYFKYMHQQKRRVWDSLLNQYITPNQKCHGEKMR 604
                                                     L + YI            
Sbjct: 588 -----------------------------------------GLRDMYI------------ 612

Query: 605 KYSAGGGTSMARDCPLICTGESGLFADSISLPFWGQDQVGSWERSLTRWNSLLPDMR 662
                      RDCPL CTGESG   DSI L FWGQD+VGSWE + TRWNS +P  R
Sbjct: 648 -----------RDCPLTCTGESGQIVDSICLSFWGQDRVGSWEHNHTRWNSRIPTFR 612

[Close]

BLAST of Lag0018056 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.0e-80
Identity = 151/326 (46.32%), Postives = 217/326 (66.56%), Query Frame = 0


Query: 185  KKINKNKVAFLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRK 244
            K+ ++N    L+LYVDD+L++G D G ++ +K  L+  F MKDLG AQ +LG++I+R+R 
Sbjct: 995  KRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERT 1054

Query: 245  NKSLALSQATYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 304
            ++ L LSQ  YI+++L R++M+N+K    P    + LSK+  P T +E  +M ++PY+SA
Sbjct: 1055 SRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSA 1114

Query: 305  VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDYMLVFGAKELV 364
            VGSLMYAM+CTRPDI +AVG+VSR+  NPG +HW AVK IL+YLR T    L FG  + +
Sbjct: 1115 VGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI 1174

Query: 365  LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 424
            L GYTD+D   D D+RKS++G +FT +GGA+ W+S  Q C+A ST EAEY+AA E  KE 
Sbjct: 1175 LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEM 1234

Query: 425  VWLRKFLTDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 484
            +WL++FL +L +         +YCD+  A+  SK    H R KHI+ +YH IRE+V    
Sbjct: 1235 IWLKRFLQELGL---HQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDES 1294

Query: 485  VVVTKIASEHNIADPFTKALSAKVFK 511
            + V KI++  N AD  TK +    F+
Sbjct: 1295 LKVLKISTNENPADMLTKVVPRNKFE 1317

[Close]

BLAST of Lag0018056 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 207.6 bits (527), Expect = 4.4e-52
Identity = 118/328 (35.98%), Postives = 189/328 (57.62%), Query Frame = 0


Query: 186  KINKNKVAFLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRKN 245
            K N N+  +++LYVDD+++   D+  +++ K +L  +F+M DL E ++ +GI+I  + + 
Sbjct: 1075 KGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQE 1134

Query: 246  KSLALSQATYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAV 305
              + LSQ+ Y+ K+L++++M+N      P    ++     S       ++    P  S +
Sbjct: 1135 DKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNS-------DEDCNTPCRSLI 1194

Query: 306  GSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDYMLVFG---AKE 365
            G LMY MLCTRPD+  AV I+SRY S    + W  +K +L+YL+ T D  L+F    A E
Sbjct: 1195 GCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFE 1254

Query: 366  LVLTGYTDSDFQTDKDSRKSTSGSVFTL-NGGAVVWRSIKQGCIADSTMEAEYVAACEAA 425
              + GY DSD+   +  RKST+G +F + +   + W + +Q  +A S+ EAEY+A  EA 
Sbjct: 1255 NKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAV 1314

Query: 426  KEAVWLRKFLTDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ 485
            +EA+WL+  LT + +   +  PI +Y DN G ++ +  P  HKR KHI+ KYH  RE VQ
Sbjct: 1315 REALWLKFLLTSINI--KLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQ 1374

Query: 486  RGDVVVTKIASEHNIADPFTKALSAKVF 510
               + +  I +E+ +AD FTK L A  F
Sbjct: 1375 NNVICLEYIPTENQLADIFTKPLPAARF 1391

[Close]

BLAST of Lag0018056 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 4.9e-43
Identity = 112/320 (35.00%), Postives = 162/320 (50.62%), Query Frame = 0


Query: 192  VAFLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRKNKSLALS 251
            + ++++YVDDIL+ GND   L    + L+ +F +K+  +  Y LGI+    R  + L LS
Sbjct: 1127 IIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIE--AKRVPQGLHLS 1186

Query: 252  QATYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYA 311
            Q  Y   +LAR +M  +K    P      L+     K P   E      Y   VGSL Y 
Sbjct: 1187 QRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE------YRGIVGSLQY- 1246

Query: 312  MLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDY-MLVFGAKELVLTGYTD 371
            +  TRPD+ YAV  +S+Y   P  DHW A+K +L+YL  T D+ + +     L L  Y+D
Sbjct: 1247 LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSD 1306

Query: 372  SDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKF 431
            +D+  D D   ST+G +  L    + W S KQ  +  S+ EAEY +    + E  W+   
Sbjct: 1307 ADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSL 1366

Query: 432  LTDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVVVTKI 491
            LT+L +   ++ P  +YCDN GA      P  H R KHI   YH IR  VQ G + V  +
Sbjct: 1367 LTELGI--QLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHV 1426

Query: 492  ASEHNIADPFTKALSAKVFK 511
            ++   +AD  TK LS   F+
Sbjct: 1427 STHDQLADTLTKPLSRVAFQ 1435

[Close]

BLAST of Lag0018056 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.7e-41
Identity = 114/320 (35.62%), Postives = 161/320 (50.31%), Query Frame = 0


Query: 192  VAFLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRKNKSLALS 251
            + ++++YVDDIL+ GND   L +  + L+ +F +KD  E  Y LGI+    R    L LS
Sbjct: 1144 IVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE--AKRVPTGLHLS 1203

Query: 252  QATYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYA 311
            Q  YI  +LAR +M  +K    P      LS     K     E      Y   VGSL Y 
Sbjct: 1204 QRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE------YRGIVGSLQY- 1263

Query: 312  MLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDY-MLVFGAKELVLTGYTD 371
            +  TRPDI YAV  +S++   P  +H  A+K IL+YL  T ++ + +     L L  Y+D
Sbjct: 1264 LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSD 1323

Query: 372  SDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKF 431
            +D+  DKD   ST+G +  L    + W S KQ  +  S+ EAEY +    + E  W+   
Sbjct: 1324 ADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSL 1383

Query: 432  LTDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVVVTKI 491
            LT+L +   +  P  +YCDN GA      P  H R KHI   YH IR  VQ G + V  +
Sbjct: 1384 LTELGI--RLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHV 1443

Query: 492  ASEHNIADPFTKALSAKVFK 511
            ++   +AD  TK LS   F+
Sbjct: 1444 STHDQLADTLTKPLSRTAFQ 1452

[Close]

BLAST of Lag0018056 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 2.1e-30
Identity = 68/133 (51.13%), Postives = 94/133 (70.68%), Query Frame = 0


Query: 296 MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDYM 355
           M+ +PY SAVG++MY M+ TRPD+  AVG++S++ S+P   HW A+K +L+YL+ T+ Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 356 LVF-GAKELVLTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 415
           L F  A    L GY+D+D+  D +SR+STSG +F LNGG V WRS KQ  +A S+ E EY
Sbjct: 61  LEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEY 120

Query: 416 VAACEAAKEAVWL 428
           +A  EA +EAVWL
Sbjct: 121 MALSEATQEAVWL 133

[Close]

BLAST of Lag0018056 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 2.9e-179
Identity = 316/332 (95.18%), Postives = 326/332 (98.19%), Query Frame = 0


Query: 185  KKINKNKVAFLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRK 244
            KKINK KVAFLVLYVDDILLIGNDVGYL+DVK WLAAQFQMKDLGEAQYVLGIQIIRDRK
Sbjct: 896  KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRK 955

Query: 245  NKSLALSQATYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 304
            NK+LALSQATYIDK+L RYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA
Sbjct: 956  NKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 1015

Query: 305  VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDYMLVFGAKELV 364
            VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVK +LKYLRRTRDYMLV+GAK+L+
Sbjct: 1016 VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLI 1075

Query: 365  LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 424
            LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Sbjct: 1076 LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 1135

Query: 425  VWLRKFLTDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 484
            VWLRKFL DLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
Sbjct: 1136 VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 1195

Query: 485  VVVTKIASEHNIADPFTKALSAKVFKGHLESL 517
            V+VTKIASEHNIADPFTK L+AKVF+GHLESL
Sbjct: 1196 VIVTKIASEHNIADPFTKTLTAKVFEGHLESL 1227

[Close]

BLAST of Lag0018056 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 3.7e-179
Identity = 318/348 (91.38%), Postives = 335/348 (96.26%), Query Frame = 0


Query: 185  KKINKNKVAFLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRK 244
            KKINK KVAFLVLYVDDILLIGNDVGYL+DVK WLAAQFQMKDLGEAQYVLGIQIIRDRK
Sbjct: 770  KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRK 829

Query: 245  NKSLALSQATYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 304
            NK+LALSQATYIDK+L RYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA
Sbjct: 830  NKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 889

Query: 305  VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDYMLVFGAKELV 364
            VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVK +LKYLRRTRDYMLV+GAK+L+
Sbjct: 890  VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLI 949

Query: 365  LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 424
            LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Sbjct: 950  LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 1009

Query: 425  VWLRKFLTDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 484
            VWLRKFL DLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
Sbjct: 1010 VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 1069

Query: 485  VVVTKIASEHNIADPFTKALSAKVFKGHLESLEAKILHEKI-TEKEYN 532
            V+VTKIASEHNIADPFTK L+AKVF+GHLESL  + ++ ++ T+  Y+
Sbjct: 1070 VIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIRLPTQYSYH 1117

[Close]

BLAST of Lag0018056 vs. ExPASy TrEMBL
Match: A0A5A7V1F5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00440 PE=4 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 2.0e-177
Identity = 314/332 (94.58%), Postives = 323/332 (97.29%), Query Frame = 0


Query: 185 KKINKNKVAFLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRK 244
           KKINK KVAFLVLYVDDILLIGND GYL+DVK WLAAQFQMKDLGEAQYVLGIQIIRDRK
Sbjct: 57  KKINKGKVAFLVLYVDDILLIGNDAGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRK 116

Query: 245 NKSLALSQATYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 304
           NK+LALSQATYIDK+L RYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA
Sbjct: 117 NKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 176

Query: 305 VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDYMLVFGAKELV 364
           VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT VK ILKYLRRTRDYMLV+GAK+L+
Sbjct: 177 VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLI 236

Query: 365 LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 424
           LTGYTDSDFQTDKDSRKSTSGSVFTLN GAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Sbjct: 237 LTGYTDSDFQTDKDSRKSTSGSVFTLNEGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 296

Query: 425 VWLRKFLTDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 484
           VWLRKFL DLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
Sbjct: 297 VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 356

Query: 485 VVVTKIASEHNIADPFTKALSAKVFKGHLESL 517
           V+VTKIASEHNIADPFTK L+AKVF+GHLESL
Sbjct: 357 VIVTKIASEHNIADPFTKILTAKVFEGHLESL 388

[Close]

BLAST of Lag0018056 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 4.6e-177
Identity = 313/332 (94.28%), Postives = 324/332 (97.59%), Query Frame = 0


Query: 185  KKINKNKVAFLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRK 244
            KKINK KVAFLVLYVDDILLIGNDVGYL+DVK WLAAQFQMKDLGE QYVLGIQIIRDRK
Sbjct: 896  KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRK 955

Query: 245  NKSLALSQATYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 304
            NK+LALSQATYIDK+L RYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA
Sbjct: 956  NKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 1015

Query: 305  VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDYMLVFGAKELV 364
            VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVK ILKYLRRTRDYMLV+GAK+L+
Sbjct: 1016 VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLI 1075

Query: 365  LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 424
            LTGYT+SDFQTDKDSRKSTS SVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Sbjct: 1076 LTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 1135

Query: 425  VWLRKFLTDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 484
            VWL+KFL DLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
Sbjct: 1136 VWLKKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 1195

Query: 485  VVVTKIASEHNIADPFTKALSAKVFKGHLESL 517
            V+VTKIASEHNIADPFTK L+AKVF+GHLESL
Sbjct: 1196 VIVTKIASEHNIADPFTKTLTAKVFEGHLESL 1227

[Close]

BLAST of Lag0018056 vs. ExPASy TrEMBL
Match: A0A5D3C3J6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002960 PE=4 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 3.4e-172
Identity = 326/477 (68.34%), Postives = 347/477 (72.75%), Query Frame = 0


Query: 185 KKINKNKVAFLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRK 244
           KKINK KVAFLVLYVDDILLIGNDVGYL+DVK WLAAQFQMKDL +AQYVL IQIIRDRK
Sbjct: 228 KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLRKAQYVLEIQIIRDRK 287

Query: 245 NKSLALSQATYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASA 304
           NK+LALSQATYIDKML RYSMQNSKKGLLPFRHGVHLSK+Q  KTPQEVEDMR IPYAS 
Sbjct: 288 NKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKKQCHKTPQEVEDMRCIPYASV 347

Query: 305 VGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDYMLVFGAKELV 364
           VGSLMY ML TRPDICYAVGI +RYQSNP LDHWT VK ILKYLRRTRDYMLV+GAK+L+
Sbjct: 348 VGSLMYVMLYTRPDICYAVGIFNRYQSNPRLDHWTVVKIILKYLRRTRDYMLVYGAKDLI 407

Query: 365 LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 424
           LTGYT+SDFQTDKDSRK T GSVFTLNG A+VWRSIKQGCIADSTM+A+YVAACEAAK+A
Sbjct: 408 LTGYTNSDFQTDKDSRKYTLGSVFTLNGEAIVWRSIKQGCIADSTMKAKYVAACEAAKKA 467

Query: 425 VWLRKFLTDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD 484
           VWLRKFL DLEVVPNMNLPITLYCDNSGAVA+SKEPRSHKRGKHI RKYHLIREIVQRGD
Sbjct: 468 VWLRKFLHDLEVVPNMNLPITLYCDNSGAVADSKEPRSHKRGKHIARKYHLIREIVQRGD 527

Query: 485 VVVTKIASEHNIADPFTKALSAKVFKGHLESLEAKILHEKITEKEYNHDELIRILTTRSK 544
           V+VTKIA EHNIA+PFTK L AKVF+GH ESL                            
Sbjct: 528 VIVTKIALEHNIANPFTKTLRAKVFEGHPESL---------------------------- 587

Query: 545 AQLLATLNHYNNEYGNVINKKPCISIDYFKYMHQQKRRVWDSLLNQYITPNQKCHGEKMR 604
                                                     L + YI            
Sbjct: 588 -----------------------------------------GLRDMYI------------ 612

Query: 605 KYSAGGGTSMARDCPLICTGESGLFADSISLPFWGQDQVGSWERSLTRWNSLLPDMR 662
                      RDCPL CTGESG   DSI L FWGQD+VGSWE + TRWNS +P  R
Sbjct: 648 -----------RDCPLTCTGESGQIVDSICLSFWGQDRVGSWEHNHTRWNSRIPTFR 612

[Close]

BLAST of Lag0018056 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 140.2 bits (352), Expect = 6.1e-33
Identity = 92/294 (31.29%), Postives = 152/294 (51.70%), Query Frame = 0


Query: 186 KINKNKVAFLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRKN 245
           KI       +++YVDDI++  N+   + ++K  L + F+++DLG  +Y LG++I R    
Sbjct: 271 KITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSA-- 330

Query: 246 KSLALSQATYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAV 305
             + + Q  Y   +L    +   K   +P    V  S         +  D +   Y   +
Sbjct: 331 AGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG----GDFVDAK--AYRRLI 390

Query: 306 GSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDYMLVFGAK-ELV 365
           G LMY  + TR DI +AV  +S++   P L H  AV  IL Y++ T    L + ++ E+ 
Sbjct: 391 GRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQ 450

Query: 366 LTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 425
           L  ++D+ FQ+ KD+R+ST+G    L    + W+S KQ  ++ S+ EAEY A   A  E 
Sbjct: 451 LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEM 510

Query: 426 VWLRKFLTDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIRE 479
           +WL +F  +L++   ++ P  L+CDN+ A+  +     H+R KHIE   H +RE
Sbjct: 511 MWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

[Close]

BLAST of Lag0018056 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 6.4e-22
Identity = 78/234 (33.33%), Postives = 116/234 (49.57%), Query Frame = 0


Query: 194 FLVLYVDDILLIGNDVGYLSDVKEWLAAQFQMKDLGEAQYVLGIQIIRDRKNKSLALSQA 253
           +L+LYVDDILL G+    L+ +   L++ F MKDLG   Y LGIQI        L LSQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQT 61

Query: 254 TYIDKMLARYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAML 313
            Y +++L    M + K    P    + L+   S     +  D R     S VG+L Y  L
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPL--PLKLNSSVSTAKYPDPSDFR-----SIVGALQYLTL 121

Query: 314 CTRPDICYAVGIVSRYQSNPGLDHWTAVKGILKYLRRTRDY-MLVFGAKELVLTGYTDSD 373
            TRPDI YAV IV +    P L  +  +K +L+Y++ T  + + +    +L +  + DSD
Sbjct: 122 -TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 181

Query: 374 FQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 427
           +     +R+ST+G    L    + W + +Q  ++ S+ E EY A    A E  W
Sbjct: 182 WAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Lag0018056 vs. TAIR 10
Match: AT5G65020.1 (annexin 2 )

HSP 1 Score: 82.0 bits (201), Expect = 2.0e-15
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 517 EAKILHEKITEKEYNHDELIRILTTRSKAQLLATLNHYNNEYGNVINK 565
           EAKILHEK++EK Y+ D+ IRILTTRSKAQL ATLNHYNNEYGN INK
Sbjct: 171 EAKILHEKVSEKSYSDDDFIRILTTRSKAQLGATLNHYNNEYGNAINK 218

[Close]

BLAST of Lag0018056 vs. TAIR 10
Match: AT5G65020.2 (annexin 2 )

HSP 1 Score: 82.0 bits (201), Expect = 2.0e-15
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 517 EAKILHEKITEKEYNHDELIRILTTRSKAQLLATLNHYNNEYGNVINK 565
           EAKILHEK++EK Y+ D+ IRILTTRSKAQL ATLNHYNNEYGN INK
Sbjct: 156 EAKILHEKVSEKSYSDDDFIRILTTRSKAQLGATLNHYNNEYGNAINK 203

[Close]

BLAST of Lag0018056 vs. TAIR 10
Match: AT5G10230.1 (annexin 7 )

HSP 1 Score: 69.7 bits (169), Expect = 1.0e-11
Identity = 34/48 (70.83%), Postives = 39/48 (81.25%), Query Frame = 0


Query: 517 EAKILHEKITEKEYNHDELIRILTTRSKAQLLATLNHYNNEYGNVINK 565
           EAKILHEKI EK Y  D+LIRILTTRSKAQ+ ATLNHY N +G  ++K
Sbjct: 171 EAKILHEKIKEKAYADDDLIRILTTRSKAQISATLNHYKNNFGTSMSK 218

The following BLAST results are available for this feature:

BLAST of Lag0018056 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025945.1	5.9e-179	95.18	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	7.7e-179	91.38	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0061170.1	4.2e-177	94.58	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035907.1	9.4e-177	94.28	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK05792.1	7.0e-172	68.34	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Lag0018056 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	5.0e-80	46.32	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	4.4e-52	35.98	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	4.9e-43	35.00	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	2.7e-41	35.63	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P0CV72	2.1e-30	51.13	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Lag0018056 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZD0	2.9e-179	95.18	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7UYE8	3.7e-179	91.38	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7V1F5	2.0e-177	94.58	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G0044...	[more]
A0A5A7T2V9	4.6e-177	94.28	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]
A0A5D3C3J6	3.4e-172	68.34	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00296...	[more]

BLAST of Lag0018056 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	6.1e-33	31.29	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	6.4e-22	33.33	DNA/RNA polymerases superfamily protein	[more]
AT5G65020.1	2.0e-15	81.25	annexin 2	[more]
AT5G65020.2	2.0e-15	81.25	annexin 2	[more]
AT5G10230.1	1.0e-11	70.83	annexin 7	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 189..274 e-value: 7.6E-15 score: 55.2
IPR037104	Annexin superfamily	GENE3D	1.10.220.10	Annexin	coord: 515..577 e-value: 3.3E-15 score: 58.0
IPR037104	Annexin superfamily	SUPERFAMILY	47874	Annexin	coord: 517..564
IPR018502	Annexin repeat	PFAM	PF00191	Annexin	coord: 518..564 e-value: 6.2E-10 score: 39.0
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 385..481
None	No IPR available	PANTHER	PTHR11439:SF273	RIBOSOME BIOGENESIS PROTEIN BOP1 HOMOLOG	coord: 385..481
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 366..507 e-value: 4.94159E-68 score: 216.951
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 180..474

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0018056.1	Lag0018056.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0005544	calcium-dependent phospholipid binding
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding