Lag0018052 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0018052
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Gag/pol protein
Location	chr5: 14834029 .. 14840928 (-)
RNA-Seq Expression	Lag0018052
Synteny	Lag0018052

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACGTTCTTTGTATGCCTCGAATAACGCCAACTACAAAACTAGTATTTCTAATACAACTAAGAAAATGAACTTAAACATTAATTGCGTGGAATTGGTCTTAAATGAGGACGATCCTCAAGCCCACATGTCTAATTCATATGAAATTGTTCATGATGAATATGACATAGACTGCTTAGCACATCTCAATGAAAATAAATTTGATTTATTGGTCATTGAAACGTGTATAGTGGAAAATGATGATACATCCTGGATTCTTGATTCAGGTGCCACTCATCACGTATGCTCTTCCTTTGAGGGAATGAGCTCTTGGCAACAGTTGGATACTGGGGAAATGACTCTAAGAGTTGGGACTGGGGAGCTTATTTCAGCTAAAGTAGTGGGAGATATTAAAATGTTCTTCTCCAGGGAACACTATATGTTATTAGATAATGTATATATAGTTCCCAAAATAAAAAGAAATTTGATTTCTGTTTCTTGTTTGCTAGAACAAGGATATTTAGTGTCCTTTTCTATGAATGAAGCTTTCATTACTAAAAGGGGTACTGATATCTATTCTGCAAAAATGGAGAACAATTTGTATGTTTTAAGACCAATAGAGTCTAGGGCTATTTTGAACAATCACTACAAGAAATATCCCTTTTTATAGCACTTGAATATAACATTTTCTAGAATAAGCTATGAAAAAAATTGGAAAAAAATTGAGAACACCCAAAAATAAAACATTTGGGACGCGCGGTGATAGTTTCAAAAGAATCACCGAAAACTTCCCTCCCGTCTTTTTCATTTTTCCCCCTCTCTCTTCCCTCTCTCTTTCCTCTCAATTATTTTTCCTTGGTCCAAGACTCCTTTCTCTTCTCTAATTCGCAACAATTGTTTCTCCACAGTTCGTAACAACAATTTTTATACAAAAAATCCAAGAGTTCACAATGGCCATTTCTTCCCAGAGACATTCAAGAGTTTGCAATTATGAGAGAAAATCCTTCGAATTTGAATTGGAACGCTGGAGTTGATGACCCACTAAACCCATTTCTTTAAATTAGTATTCTCTATTTGCAATTCGAACTCACAAGTCCTTGAAATCGTTTCATTCTCTACATTTCTTCTCCTTTCCTTATCTATTTATCTCTGAAATTGCAGGTGTCGAAGATAATGTTGATGTCGACTGTGTTATTTGAAGATATCACTAGTGTGAAAGAACACGTTGTCAATGTGTTGTATGCTCGAAACTCGTTGGTGTCGTGGTTGGCGTATGGCACCACAATAGAGGCCAGAAGAAGGACCACAAGGTATAGCTTCCCCATCACCGCCATGCTTGAGAATCGATGTTGCAAGTAAGGTGTTTGTGGAAATGTGGAAGAGGAAATTACTTTTGTTTTTTTTCTTTTTAGTACTTGTTTTGATAGGCATGTTCAAGCTTGTAGTCTTGAATCTTCCTTGTTATAACTATAACATGTTAGGGCTTTGGCTTTTATAATTCACATTATTGCTATGTATGTAAAATATCCACACTTGAACCACACAAACCACTTCCTTTACACAAGGTATAGGTACTGTTGTAAACCGTAAAAGAGGAAAATTGTTGGTTGATTTGGTGCATCCAGGCGATGAGGTTCTTGTTGCTAGAGGAGGACAAGGATGGGTATGATGGACGTTTCTTCTCTGTTAAGTTTTTCTAAAACGAGCTTAATTTTAGTGGTGGTCAATAAATTTATGCACATTTCTAGTCAGTCGCTAAAGTTAAAAGTTTATATTTTAGTCCCTCAAAATTTAAAAAGTTTCAAATTTAATATTTTCCATTAATATATGAGTCGAAGAAAAAAATTACATGGATTCCTTTTGGAACTTATTAAACTTATGAGATTTAACATAATACATCTTAAAATCTAGGGTCAACTTAGTAACATGGCGAACTTCAGAGAGAAACTAGCTTTTGACCTTTTCTTAATGATGATTATTTTTATCTTCCTGTACTTGACATTCCAAGTTTTAGTTTTCATGTTCTTCTAAATTGTTAGAATGGAAATTGTATCCAAATGATTCTTAAACTCTGATATTTCAATAATATTGTCATTATTTATAGATATCCTAGTTTTACTTGTCTTGTGCAGATTATCCCGATAGATACGCCATTGTGCAGATTATCCCGATAGATATGCCAGAGAGAAGGATAAATATTATGTCTCCAACCTCCAATGTTATGAGAGATGAAAGTGATAAGGTGGAGATTGTGATCATTTACATATTTGTATTAATTCATGTGCGATATTAATGTGTTTCCTACATAGGAAAAAAAAAACAAGACTTTGACATGAGAATTAGTTAAATGCTATGATATTTCCAATAACAAACTCCCTCTTCTTGTCTTGTAATTCTATCTCTGCATAGGTTTGATTTATTTCTTAAATTTCCCTATCACATATATTTGTACTTCTTACTTGGACTCTTTTATGTTGCTTACTTATTAATCAGAATTAATATATTTTTCAGGTTCGGGTATTCGGTCAACTTGGGGAAAAGGTCAGTCTCGAGTTGATTCTTCGAGTAGTTGCTGACGTTGGTCTAGTGGTGAGTACATCCAGTTTATTTTATTTTATCCTTATTTTCTATCTTTCTGCAGGGTACAAGTCTTAGTAACTTCTCTAGTAAATAGTAAATACATTTGTGGAGTTCTGAGTCATGGTTTTGAACTGCTTTTTACAATTGTTTTCATCTAACCACTAGCCTTGTCTGAGGTTTGTGTTTTCATGATCTTCTATCACTTGAGCTTTGCCGATGGAAAATTGGATAGTTACTGTGTAGTTTCTATTTGTAATTAACTTTTACAGCCACATTATAAATGTTTAATTGCCCTTTTCAGGCTAGGGAAGGAAACAAGGTCAGCTATGTTTGTTGTAGTAGCTTCAGTCCCCTCGATGTTGACAAAGCAACACATGTTGGCAGAGGGGGTGGAGGAGCATTTGGGGATGGAGAGACTGGTTTTTAGAGTCAAAGGAGGCATAGGCATTGTGTGTCAGTGTAAAACTTCCAAACAAAGTAGCATAACCATTTTTCACAAAAAATCCAATCATCAAGGAGCTCAAAAGGCTTACCACATCAACAATAGGCTGCAAAATCTAAGGGGCCAACAAACTAGAAGGCTTATCTTCAAAGGTAATTGTCATATTTTGTTGAAATCTTGGAATTTTACAACTTTCACATATTTTGTTGGCAAGCATAAATGGATGCATGTGTTTAGGCAATGAGAATGACCTACTATGAAATTCTAGCTTAATTATAATTTTGTCTAGGTTTTTTAGTTTTGAGTGTGATCATGTTTTATAATTTTGACTAAGGTTTGTTAGTTTTGAGATTTTGGTTTAATGGTTTGAGATTCTAGCTTAAATTATAGGTTGCAAGGGTAGTTTGGATTTTTCGATATGCCTAGCATAGTATTTTCAGTGACTTGGTTTGTAATTCTTGAAGGTTAGATTTAACAACTAAACATTATCATTTCTCTAGAAGCTATTGCTTTTCTTCTTTAGCTAATTATCTAGTTTTGTTTTCAAGATTGTTCATGTTCTTAGGGATTTATCAAGATTTATTTTCTTTGGTCCTATGGTCATGCATGTTTATAAGAATTCGAGCTTAATATGAAAGTAGAAGCATATTGTGTATTTCCTTTTATAATGCAACCTTTTAGTCAATTTTCATTTTGCTTGGTTTAGGGGAGGGGTGAAGAGTTTAGGAGACACCTTGTGACTTTGTTGTGATCTCTTACTTATAGGATGGGTAAAATTTGGTCGAAAAATGACTTCCAAGAATTTTTTTTTTTTTTGGGGGGGGGGGGGTGTTTAGAATAGTGGAGTTGAGACCTCTTCTTTATATCTTTCGCTTGTGATTTTGTAACGATATTTTGCAATGCATATTATACACTTGAAGAATAAGTGAAATTTTGTTGAAAAAGACTCCAAGAGTTTTGCTTTATTGTTTTATGGAAAGTGAGGAAGACTACAAGAGTTAGCTTTGTGACTTTCTTTGCGATTTATTATCTTTTTAGTGGTAGTTTATGACATGGTAGCTTTTCTTAAAAAAAAGTAAAGTTAATAGTTATTTTAGATAATATATACTTCGAAATATAATCTTCGTTGGGCATCCTTTCAAGAGTTGTTATGTTGGTTGCTTGTCATGTATATAAAAAAAACATGTTTAGTTGTGTTTGAAAAACACGATGTTGCTTAGTTTGTTGTATGTTGTTTGATGGCTCTTCAGGTGTGAGCCACTTACTTAGTGCCATTGTTTGTACTGACCTACCATCAAATTTTGCAGGTGATGAGGATTACTAGGAATCGGGTGATGCTGAGGAAGAGCTCTGAGGAACAATAATAGCTCTCTAAATCTTAATTTCATTGTTATCTTGTGCTTAAATAGTGGTTGTTAGAAAGACTTAGTCATTTTATTTAGTTGGGTGTTATTTAATTCGAGGGGCATAACTTACTCTTGTGGTTAGCATTATATGTTATACTTATAAGTTTATTTGAGTTATTTAAATGAAATTTGTTATGAGATTTGACTCGTAATTCTTTTTGGAATTCTTTGGTGTTATGTGTTCTCTTAAGCAGGTGGTTGAAAATTTTGGTTAGCTATAGTTATGTTGTTATGCTGTCGAAATTCTTAGAAGTGTTTCAACGAATAATAGAGATAAATTTGGTAATGTCATTTATAATAGGTAAATTTTGGTATTGTCTATTCTTGAAAATTTATTTTGATGTAAGTGTATTTAAATACATTGTATGTTTATATAAATGAGTTTATTTTACAATAACATTTGAAAAATATTTGGTACTCCTATAAAATGTTATAGAAATTGTTACATATTACTCAAAAAATGGTACAAATGTATGCGTGTATGTATAAATGCTATTAAAAGTTACTTACTATCCATAACATTGTCTATCACGATGATGAAATAAAACATGATTATGTTTTGATAACATTTTTAAATGATATAAAAAGATGCTATTAAAGAGCAACCATAACATTTTTTACTAGCGTTATGAAAAGTTTTTATAACATTAAAAATGTGCAAAAAAATTTTGATTTTTTATAGCTTTTTATAGCGTTTTTTTACTGCTATAGAAAACGCTATTAAAGGGCAATCATAGCGTTTTTTGCTAACGCTATGAAAAATTTCAATAACGCTATGAAAACTTTCAATAATATTAAAATTACGCAATTGAAACGAAATTTGTATAGTCTTTTTTATAGCGTTGAAAAAACGCTATGAAAAGTCGGAGACTTTCAATAACATCGGCTACGACAGCGTTTCAAAAAACGCTATGGAAAGCCTACGATAGCGTTTTTTTAATGCTATCGTAAGTGATATTTGTTGTAGTGAATGAAATGTTTAAAACAGCCGAGACTCAACCAAAAAGGCAGAAAGTTTCTCAAAGTACCTATCTTTGGCACTTGAGACTTGGAAACATAAATCTCAATATGATTGGGAGATTGGTTAAGAACGGACTTCTAAGCCAGTTAGAAGATGGTACTTTACCTTCGTGTGAGTCAGGTCTCGAAGGTAAGATGACCAAACGACCTTTTACTGAAAAGATTATCGCGCCAAGGAGCCCTTAGAACTCGTACATACGGATCTCTGTGGTCCAATGAATGTAAGAGCTCGAGGAGGGTATGAATATTTCATCTCTTTCATAGATGATTATTCAAGGTATGATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATACCTAATGAGTCATAAGTCTGAAGCCCTTAAAAAGTTCAAGGAGTATAGGACTGAAATTGAGAACTTGTTAGGTAAGACCATTAAAACACTTCGATCCGATCGAGGTGGAGAGTATTTGGGCTTAAAATTCCAGAATTATTTGATAGAACATGAAATCTCGTCTCAACTCTTAGCACCAGGTACACCTCAACAGAATGGTGTATCTGAAAGGAGAAATAGAACCTTGTTGGACATGGTTCGATCTATGATGAGCTATGCTCAACTGCCTAGTTCTTTTTGGGGTTATGCAGTAGAGATTGCAGTTTATATTTTGAATGTAGTTTCCTCAAAGAGTGTTTCTAAAACACCATTTGAGCTCTGGAGAGGGCGTAAAGCTAGTTTACCTCATTTCAGAATTTGGGGTTGTCCTGCACATGTGCTTGTGGCAAACCCAAAGAAATTGGATTCACGTTCAAAATTATGCCTATTCGTAGGCTACCCAAAAGAAACAAGGGGTGGATACTTCTTCGATCCACAAGAAAATAAAGTTTTTGTTTCGACAAATGCTACTTTCTTAGAAGAAGACCACGTTCGAGAACACAAGCCACACAGTAAAATGGTGTTAAGTGGACTTTCTGGTGAAGCTACGAATGAATCAACAAGAGTTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATAAGGTTGGACCTTCAACAAGGGTTGTTGATGAGCCCAGTACACAGACTGGACCTTCAACAAGAGTTGTAGATGAGCCCAGTACATCTGGTCAAGCCCAACCTTCTCAACAGTTTAGAATGCCTCGACGTAGTGGGAGGGTTGTTACTCAACCTGAACGCTATTTGAGTTTAGCAGAAACTCCAGCTGTCATATCTGATGATGGAATCGAGGATCCATTGACCTTTAGACAGGCAATGAATGATGTGGACCATGATGAGTGGGTCAAAGCTATGGACCTAGAGATGGAGTCTATGTACTTCAATCAAGTTTCACTACTACAAATTTGA

mRNA sequence

ATGAAACGTTCTTTGTATGCCTCGAATAACGCCAACTACAAAACTAGTATTTCTAATACAACTAAGAAAATGAACTTAAACATTAATTGCGTGGAATTGGTCTTAAATGAGGACGATCCTCAAGCCCACATGTCTAATTCATATGAAATTGTTCATGATGAATATGACATAGACTGCTTAGCACATCTCAATGAAAATAAATTTGATTTATTGGTCATTGAAACGTGTATAGTGGAAAATGATGATACATCCTGGATTCTTGATTCAGGTGCCACTCATCACGTATGCTCTTCCTTTGAGGGAATGAGCTCTTGGCAACAGTTGGATACTGGGGAAATGACTCTAAGAGTTGGGACTGGGGAGCTTATTTCAGCTAAAGTAGTGGGAGATATTAAAATGTTCTTCTCCAGGGAACACTATATGTTATTAGATAATGTGTCGAAGATAATGTTGATGTCGACTGTGTTATTTGAAGATATCACTAGTGTGAAAGAACACGTTGTCAATGTGTTGTATGCTCGAAACTCGTTGGTGTCGTGGTTGGCGTATGGCACCACAATAGAGGCCAGAAGAAGGACCACAAGGTATAGCTTCCCCATCACCGCCATGCTTGAGAATCGATGTTGCAAATACGCCATTGTGCAGATTATCCCGATAGATATGCCAGAGAGAAGGATAAATATTATGTCTCCAACCTCCAATGTTATGAGAGATGAAAGTGATAAGGTTCGGGTATTCGGTCAACTTGGGGAAAAGGTCAGTCTCGAGTTGATTCTTCGAGTAGTTGCTGACGTTGGTCTAGTGGCTAGGGAAGGAAACAAGGTCAGCTATGTTTGTTGTAGTAGCTTCAGTCCCCTCGATGTTGACAAAGCAACACATGTTGGCAGAGGGGGTGGAGGAGCATTTGGGGATGGAGAGACTGGTGTGAGCCACTTACTTAGTGCCATTGTTTGTACTGACCTACCATCAAATTTTGCAGTGAATGAAATGTTTAAAACAGCCGAGACTCAACCAAAAAGGCAGAAAGTTTCTCAAAGTACCTATCTTTGGCACTTGAGACTTGGAAACATAAATCTCAATATGATTGGGAGATTGGTTAAGAACGGACTTCTAAGCCAGTTAGAAGATGGTACTTTACCTTCGTGTGAGTCAGGTCTCGAAGGTAAGACCATTAAAACACTTCGATCCGATCGAGGTGGAGAGTATTTGGGCTTAAAATTCCAGAATTATTTGATAGAACATGAAATCTCGTCTCAACTCTTAGCACCAGGTACACCTCAACAGAATGGTGTATCTGAAAGGAGAAATAGAACCTTGTTGGACATGGTTCGATCTATGATGAGCTATGCTCAACTGCCTAGTTCTTTTTGGGGTTATGCAGTAGAGATTGCAGTTTATATTTTGAATGTAGTTTCCTCAAAGAGTGTTTCTAAAACACCATTTGAGCTCTGGAGAGGGCGTAAAGCTAGTTTACCTCATTTCAGAATTTGGGGTTGTCCTGCACATGTGCTTGTGGCAAACCCAAAGAAATTGGATTCACGTTCAAAATTATGCCTATTCGTAGGCTACCCAAAAGAAACAAGGGGTGGATACTTCTTCGATCCACAAGAAAATAAAGTTTTTGTTTCGACAAATGCTACTTTCTTAGAAGAAGACCACGTTCGAGAACACAAGCCACACAGTAAAATGGTGTTAAGTGGACTTTCTGGTGAAGCTACGAATGAATCAACAAGAGTTGGACCTTCAACAAGGGTTGTTGATGAGCCCAGTACACAGACTGGACCTTCAACAAGAGTTGTAGATGAGCCCAGTACATCTGGTCAAGCCCAACCTTCTCAACAGTTTAGAATGCCTCGACGTAGTGGGAGGGTTGTTACTCAACCTGAACGCTATTTGAGTTTAGCAGAAACTCCAGCTGTCATATCTGATGATGGAATCGAGGATCCATTGACCTTTAGACAGGCAATGAATGATGTGGACCATGATGAGTGGGTCAAAGCTATGGACCTAGAGATGGAGTCTATGTACTTCAATCAAGTTTCACTACTACAAATTTGA

Coding sequence (CDS)

ATGAAACGTTCTTTGTATGCCTCGAATAACGCCAACTACAAAACTAGTATTTCTAATACAACTAAGAAAATGAACTTAAACATTAATTGCGTGGAATTGGTCTTAAATGAGGACGATCCTCAAGCCCACATGTCTAATTCATATGAAATTGTTCATGATGAATATGACATAGACTGCTTAGCACATCTCAATGAAAATAAATTTGATTTATTGGTCATTGAAACGTGTATAGTGGAAAATGATGATACATCCTGGATTCTTGATTCAGGTGCCACTCATCACGTATGCTCTTCCTTTGAGGGAATGAGCTCTTGGCAACAGTTGGATACTGGGGAAATGACTCTAAGAGTTGGGACTGGGGAGCTTATTTCAGCTAAAGTAGTGGGAGATATTAAAATGTTCTTCTCCAGGGAACACTATATGTTATTAGATAATGTGTCGAAGATAATGTTGATGTCGACTGTGTTATTTGAAGATATCACTAGTGTGAAAGAACACGTTGTCAATGTGTTGTATGCTCGAAACTCGTTGGTGTCGTGGTTGGCGTATGGCACCACAATAGAGGCCAGAAGAAGGACCACAAGGTATAGCTTCCCCATCACCGCCATGCTTGAGAATCGATGTTGCAAATACGCCATTGTGCAGATTATCCCGATAGATATGCCAGAGAGAAGGATAAATATTATGTCTCCAACCTCCAATGTTATGAGAGATGAAAGTGATAAGGTTCGGGTATTCGGTCAACTTGGGGAAAAGGTCAGTCTCGAGTTGATTCTTCGAGTAGTTGCTGACGTTGGTCTAGTGGCTAGGGAAGGAAACAAGGTCAGCTATGTTTGTTGTAGTAGCTTCAGTCCCCTCGATGTTGACAAAGCAACACATGTTGGCAGAGGGGGTGGAGGAGCATTTGGGGATGGAGAGACTGGTGTGAGCCACTTACTTAGTGCCATTGTTTGTACTGACCTACCATCAAATTTTGCAGTGAATGAAATGTTTAAAACAGCCGAGACTCAACCAAAAAGGCAGAAAGTTTCTCAAAGTACCTATCTTTGGCACTTGAGACTTGGAAACATAAATCTCAATATGATTGGGAGATTGGTTAAGAACGGACTTCTAAGCCAGTTAGAAGATGGTACTTTACCTTCGTGTGAGTCAGGTCTCGAAGGTAAGACCATTAAAACACTTCGATCCGATCGAGGTGGAGAGTATTTGGGCTTAAAATTCCAGAATTATTTGATAGAACATGAAATCTCGTCTCAACTCTTAGCACCAGGTACACCTCAACAGAATGGTGTATCTGAAAGGAGAAATAGAACCTTGTTGGACATGGTTCGATCTATGATGAGCTATGCTCAACTGCCTAGTTCTTTTTGGGGTTATGCAGTAGAGATTGCAGTTTATATTTTGAATGTAGTTTCCTCAAAGAGTGTTTCTAAAACACCATTTGAGCTCTGGAGAGGGCGTAAAGCTAGTTTACCTCATTTCAGAATTTGGGGTTGTCCTGCACATGTGCTTGTGGCAAACCCAAAGAAATTGGATTCACGTTCAAAATTATGCCTATTCGTAGGCTACCCAAAAGAAACAAGGGGTGGATACTTCTTCGATCCACAAGAAAATAAAGTTTTTGTTTCGACAAATGCTACTTTCTTAGAAGAAGACCACGTTCGAGAACACAAGCCACACAGTAAAATGGTGTTAAGTGGACTTTCTGGTGAAGCTACGAATGAATCAACAAGAGTTGGACCTTCAACAAGGGTTGTTGATGAGCCCAGTACACAGACTGGACCTTCAACAAGAGTTGTAGATGAGCCCAGTACATCTGGTCAAGCCCAACCTTCTCAACAGTTTAGAATGCCTCGACGTAGTGGGAGGGTTGTTACTCAACCTGAACGCTATTTGAGTTTAGCAGAAACTCCAGCTGTCATATCTGATGATGGAATCGAGGATCCATTGACCTTTAGACAGGCAATGAATGATGTGGACCATGATGAGTGGGTCAAAGCTATGGACCTAGAGATGGAGTCTATGTACTTCAATCAAGTTTCACTACTACAAATTTGA

Protein sequence

MKRSLYASNNANYKTSISNTTKKMNLNINCVELVLNEDDPQAHMSNSYEIVHDEYDIDCLAHLNENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVKEHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVNEMFKTAETQPKRQKVSQSTYLWHLRLGNINLNMIGRLVKNGLLSQLEDGTLPSCESGLEGKTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPSTRVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWVKAMDLEMESMYFNQVSLLQI

Homology

[Close]

BLAST of Lag0018052 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 545.4 bits (1404), Expect = 6.9e-151
Identity = 333/715 (46.57%), Postives = 405/715 (56.64%), Query Frame = 0


Query: 51  VHDEYDIDCLAHL-----NENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSW 110
           V + +  +C  +L      E K+DLLV+ETC+VEND  +WILDSGAT+HVCSS +  SS+
Sbjct: 166 VDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSF 225

Query: 111 QQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVKE 170
           +QL+  EMTL+VGTG++ISA+ VGD K+FF  + +M L+N+  +  +   L   ++ + E
Sbjct: 226 KQLEDSEMTLKVGTGDVISARAVGDAKLFFGNK-FMFLENLYIVPKIKRNLV-SVSCLIE 285

Query: 171 HVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERR 230
           H+ ++ ++ N       Y   +             +A LEN                   
Sbjct: 286 HMYSINFSMNEA---FIYKNGVHI----------CSAKLEN------------------N 345

Query: 231 INIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSP 290
           + ++ P                                                      
Sbjct: 346 LYVLRP------------------------------------------------------ 405

Query: 291 LDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVNEMFKTAETQPKRQKVS- 350
                             + +  ++H                 EMF+TA TQ KRQ++S 
Sbjct: 406 -----------------NEAKAVLNH-----------------EMFRTANTQNKRQRISP 465

Query: 351 -QSTYLWHLRLGNINLNMIGRLVKNGLLSQLEDGTLPSCESGLEG--------------- 410
             +TYLWHLRLG+INL+ IGRLVKNGLL++L+D +LP CES LEG               
Sbjct: 466 NNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAK 525

Query: 411 ------------------------------------------------------------ 470
                                                                       
Sbjct: 526 EPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVEN 585

Query: 471 ---KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRS 530
              K IK LRSDRGGEY+ L+FQ+Y+IEH I SQL APGTPQQNGVSERRNRTLLDMVRS
Sbjct: 586 LLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRS 645

Query: 531 MMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLV 590
           MMSYAQLPSSFWGYAVE AV+ILN V SKSVS+TPFELWRGRK SL HFRIWGCPAHVLV
Sbjct: 646 MMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLV 705

Query: 591 ANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVL 650
            NPKKL+ RS+LC FVGYPKETRGG FFDPQEN+VFVSTNATFLEEDH+R HKP SK+VL
Sbjct: 706 TNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVL 744

Query: 651 SGLSGEATNESTRVGPSTRVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVV 681
           S    EAT+E      STRVVDE     GPS+R VDE +TSGQ+ PSQ  RMPRRSGRVV
Sbjct: 766 S----EATDE------STRVVDE----VGPSSR-VDETTTSGQSHPSQSLRMPRRSGRVV 744

[Close]

BLAST of Lag0018052 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 538.9 bits (1387), Expect = 6.4e-149
Identity = 330/715 (46.15%), Postives = 404/715 (56.50%), Query Frame = 0


Query: 51  VHDEYDIDCLAHL-----NENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSW 110
           V + +  +C  +L      E+K+DLLV+ETC+VEND  +WILDSGAT+HVCSS +  SS+
Sbjct: 166 VDEHWKTNCPKYLVKKNEKESKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSF 225

Query: 111 QQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVKE 170
           +QL+  EMTL+VGTG++ISA+ VGD K+FF  + +M L+N+  +  +   L   ++ + E
Sbjct: 226 KQLEDSEMTLKVGTGDVISARAVGDAKLFFGNK-FMFLENLYIVPKIKRNLV-SVSCLIE 285

Query: 171 HVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERR 230
           H+ ++ ++ N       Y   +             +A LEN                   
Sbjct: 286 HMYSINFSMNEA---FIYKNGVHI----------CSAKLEN------------------N 345

Query: 231 INIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSP 290
           + ++ P                                                      
Sbjct: 346 LYVLRP------------------------------------------------------ 405

Query: 291 LDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVNEMFKTAETQPKRQKVS- 350
                             + +  ++H                 EMF+TA TQ KRQ++S 
Sbjct: 406 -----------------NEAKAVLNH-----------------EMFRTANTQNKRQRISP 465

Query: 351 -QSTYLWHLRLGNINLNMIGRLVKNGLLSQLEDGTLPSCESGLEG--------------- 410
             +TYLWHLRLG+INL+ IGRLVK+GLL++L+D +LP CES LEG               
Sbjct: 466 NNNTYLWHLRLGHINLDRIGRLVKDGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAK 525

Query: 411 ------------------------------------------------------------ 470
                                                                       
Sbjct: 526 EPLELIHSDLCGPMNVKARGSFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVEN 585

Query: 471 ---KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRS 530
              K IK  RSDRGGEY+ L FQ+Y+IEH I SQL APGTPQQNGVSERRNRTLLDMVRS
Sbjct: 586 LLSKKIKIFRSDRGGEYMDLIFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRS 645

Query: 531 MMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLV 590
           MMSYAQLPSSFWGYAVE AV+ILN V SKSVS+TPFELWRGRK SL HFRIWGCPAHVLV
Sbjct: 646 MMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLV 705

Query: 591 ANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVL 650
            NPKKL+ RS+LC FVGYPKETRGG FFDP+EN+VFVSTNATFLEEDH+R HKP SK+VL
Sbjct: 706 TNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRSKLVL 744

Query: 651 SGLSGEATNESTRVGPSTRVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVV 681
           S    EAT+E      STRVVDE     GPS+R VDE +TSGQ+ PSQ  RMPRRSGRVV
Sbjct: 766 S----EATDE------STRVVDE----VGPSSR-VDETTTSGQSHPSQSLRMPRRSGRVV 744

[Close]

BLAST of Lag0018052 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 520.8 bits (1340), Expect = 1.8e-143
Identity = 328/697 (47.06%), Postives = 391/697 (56.10%), Query Frame = 0


Query: 65  ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELIS 124
           + K+DLLV+ETC+VENDD++WI+DSGAT+HVCSSF+G+SSW+QL+TGEMT+RVGTG ++S
Sbjct: 287 QGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVS 346

Query: 125 AKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVKEHVVNVLYARNSLVSWLAYG 184
           A  VG +++   +  ++LL+NV                   +VV  L  + +L+S     
Sbjct: 347 AIAVGGLRLCLQKS-FLLLENV-------------------YVVPDL--KRNLIS----- 406

Query: 185 TTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVR 244
                          +  +LE                        S T NV     +KV 
Sbjct: 407 ---------------VKCLLEQS---------------------YSLTFNV-----NKVF 466

Query: 245 VFGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGD 304
           ++    E  S +L             E N                               
Sbjct: 467 IYKNGVEICSAKL-------------ENN------------------------------- 526

Query: 305 GETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM 364
                       V   L S   +N EMFKTA TQ KR K+S  ++ +LWHLRLG+INLN 
Sbjct: 527 ----------LYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNR 586

Query: 365 IGRLVKNGLLSQLEDGTLPSCESGLEG--------------------------------- 424
           I RLVKNGLLS+LE+ +LP CES LEG                                 
Sbjct: 587 IERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKA 646

Query: 425 ---------------------------------------------KTIKTLRSDRGGEYL 484
                                                        KTIKT RSDRGGEY+
Sbjct: 647 RGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYM 706

Query: 485 GLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEI 544
            LKFQNYL+E  I SQL APGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+ 
Sbjct: 707 DLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQT 766

Query: 545 AVYILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGY 604
           AVYILN V SKSVS+TP +LW GRK SL HFRIWGCPAHVL  NPKKL+ RSKLCLFVGY
Sbjct: 767 AVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGY 826

Query: 605 PKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST 664
           PK TRGGYF+DP++NKVFVSTNATFLEEDH+REHKP SK+VL+ LS E T       PST
Sbjct: 827 PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTE------PST 850

Query: 665 RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISD 681
           RVV+EPS      TRVV   S++   QP Q  R PRRSGRV   P RY+SL ET  VISD
Sbjct: 887 RVVEEPSA----LTRVVHVGSSTRTHQP-QSLREPRRSGRVTNLPIRYMSLTETLTVISD 850

[Close]

BLAST of Lag0018052 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 520.8 bits (1340), Expect = 1.8e-143
Identity = 328/697 (47.06%), Postives = 391/697 (56.10%), Query Frame = 0


Query: 65  ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELIS 124
           + K+DLLV+ETC+VENDD++WI+DSGAT+HVCSSF+G+SSW+QL+TGEMT+RVGTG ++S
Sbjct: 288 QGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVS 347

Query: 125 AKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVKEHVVNVLYARNSLVSWLAYG 184
           A  VG +++   +  ++LL+NV                   +VV  L  + +L+S     
Sbjct: 348 AIAVGGLRLCLQKS-FLLLENV-------------------YVVPDL--KRNLIS----- 407

Query: 185 TTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVR 244
                          +  +LE                        S T NV     +KV 
Sbjct: 408 ---------------VKCLLEQS---------------------YSLTFNV-----NKVF 467

Query: 245 VFGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGD 304
           ++    E  S +L             E N                               
Sbjct: 468 IYKNGVEICSAKL-------------ENN------------------------------- 527

Query: 305 GETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM 364
                       V   L S   +N EMFKTA TQ KR K+S  ++ +LWHLRLG+INLN 
Sbjct: 528 ----------LYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNR 587

Query: 365 IGRLVKNGLLSQLEDGTLPSCESGLEG--------------------------------- 424
           I RLVKNGLLS+LE+ +LP CES LEG                                 
Sbjct: 588 IERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKA 647

Query: 425 ---------------------------------------------KTIKTLRSDRGGEYL 484
                                                        KTIKT RSDRGGEY+
Sbjct: 648 RGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYM 707

Query: 485 GLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEI 544
            LKFQNYL+E  I SQL APGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+ 
Sbjct: 708 DLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQT 767

Query: 545 AVYILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGY 604
           AVYILN V SKSVS+TP +LW GRK SL HFRIWGCPAHVL  NPKKL+ RSKLCLFVGY
Sbjct: 768 AVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGY 827

Query: 605 PKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST 664
           PK TRGGYF+DP++NKVFVSTNATFLEEDH+REHKP SK+VL+ LS E T       PST
Sbjct: 828 PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTE------PST 851

Query: 665 RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISD 681
           RVV+EPS      TRVV   S++   QP Q  R PRRSGRV   P RY+SL ET  VISD
Sbjct: 888 RVVEEPSA----LTRVVHVGSSTRTHQP-QSLREPRRSGRVTNLPIRYMSLTETLTVISD 851

[Close]

BLAST of Lag0018052 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 520.8 bits (1340), Expect = 1.8e-143
Identity = 328/697 (47.06%), Postives = 391/697 (56.10%), Query Frame = 0


Query: 65  ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELIS 124
           + K+DLLV+ETC+VENDD++WI+DSGAT+HVCSSF+G+SSW+QL+TGEMT+RVGTG ++S
Sbjct: 288 QGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVS 347

Query: 125 AKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVKEHVVNVLYARNSLVSWLAYG 184
           A  VG +++   +  ++LL+NV                   +VV  L  + +L+S     
Sbjct: 348 AIAVGGLRLCLQKS-FLLLENV-------------------YVVPDL--KRNLIS----- 407

Query: 185 TTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVR 244
                          +  +LE                        S T NV     +KV 
Sbjct: 408 ---------------VKCLLEQS---------------------YSLTFNV-----NKVF 467

Query: 245 VFGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGD 304
           ++    E  S +L             E N                               
Sbjct: 468 IYKNGVEICSAKL-------------ENN------------------------------- 527

Query: 305 GETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM 364
                       V   L S   +N EMFKTA TQ KR K+S  ++ +LWHLRLG+INLN 
Sbjct: 528 ----------LYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNR 587

Query: 365 IGRLVKNGLLSQLEDGTLPSCESGLEG--------------------------------- 424
           I RLVKNGLLS+LE+ +LP CES LEG                                 
Sbjct: 588 IERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKA 647

Query: 425 ---------------------------------------------KTIKTLRSDRGGEYL 484
                                                        KTIKT RSDRGGEY+
Sbjct: 648 RGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYM 707

Query: 485 GLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEI 544
            LKFQNYL+E  I SQL APGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+ 
Sbjct: 708 DLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQT 767

Query: 545 AVYILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGY 604
           AVYILN V SKSVS+TP +LW GRK SL HFRIWGCPAHVL  NPKKL+ RSKLCLFVGY
Sbjct: 768 AVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGY 827

Query: 605 PKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST 664
           PK TRGGYF+DP++NKVFVSTNATFLEEDH+REHKP SK+VL+ LS E T       PST
Sbjct: 828 PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTE------PST 851

Query: 665 RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISD 681
           RVV+EPS      TRVV   S++   QP Q  R PRRSGRV   P RY+SL ET  VISD
Sbjct: 888 RVVEEPSA----LTRVVHVGSSTRTHQP-QSLREPRRSGRVTNLPIRYMSLTETLTVISD 851

[Close]

BLAST of Lag0018052 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 9.0e-37
Identity = 106/305 (34.75%), Postives = 158/305 (51.80%), Query Frame = 0


Query: 388 GKTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMM 447
           G+ +K LRSD GGEY   +F+ Y   H I  +   PGTPQ NGV+ER NRT+++ VRSM+
Sbjct: 541 GRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSML 600

Query: 448 SYAQLPSSFWGYAVEIAVYILNVVSSKSVS-KTPFELWRGRKASLPHFRIWGCP--AHVL 507
             A+LP SFWG AV+ A Y++N   S  ++ + P  +W  ++ S  H +++GC   AHV 
Sbjct: 601 RMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVP 660

Query: 508 VANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMV 567
                KLD +S  C+F+GY  E  G   +DP + KV  S +  F  E  VR     S+ V
Sbjct: 661 KEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVF-RESEVRTAADMSEKV 720

Query: 568 LSG-LSGEATNESTRVGPST--RVVDEPSTQTGPSTRVVDE--------PSTSGQAQPSQ 627
            +G +    T  ST   P++     DE S Q      V+++               Q  +
Sbjct: 721 KNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEE 780

Query: 628 QFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWVKAMDLEME 679
           Q +  RRS R   +  RY S      +ISDD   +P + ++ ++  + ++ +KAM  EME
Sbjct: 781 QHQPLRRSERPRVESRRYPSTEY--VLISDD--REPESLKEVLSHPEKNQLMKAMQEEME 840

[Close]

BLAST of Lag0018052 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 115.2 bits (287), Expect = 3.0e-24
Identity = 66/184 (35.87%), Postives = 100/184 (54.35%), Query Frame = 0


Query: 397 DRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF 456
           D G EYL  + + + ++  IS  L  P TPQ NGVSER  RT+ +  R+M+S A+L  SF
Sbjct: 550 DNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSF 609

Query: 457 WGYAVEIAVYILNVVSSKSV---SKTPFELWRGRKASLPHFRIWGCPAHVLVANPK-KLD 516
           WG AV  A Y++N + S+++   SKTP+E+W  +K  L H R++G   +V + N + K D
Sbjct: 610 WGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFD 669

Query: 517 SRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEA 576
            +S   +FVGY  E  G   +D    K  V+ +    E + V       + V    S E+
Sbjct: 670 DKSFKSIFVGY--EPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKES 729

[Close]

BLAST of Lag0018052 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.9e-19
Identity = 50/163 (30.67%), Postives = 91/163 (55.83%), Query Frame = 0


Query: 391 IKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYA 450
           I T  SD GGE++ L    Y  +H IS     P TP+ NG+SER++R +++   +++S+A
Sbjct: 586 IGTFYSDNGGEFVAL--WEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHA 645

Query: 451 QLPSSFWGYAVEIAVYILNVVSSKSVS-KTPFELWRGRKASLPHFRIWGCPAHVLVA--N 510
            +P ++W YA  +AVY++N + +  +  ++PF+   G   +    R++GC  +  +   N
Sbjct: 646 SIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYN 705

Query: 511 PKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLE 551
             KLD +S+ C+F+GY            Q +++++S +  F E
Sbjct: 706 QHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDE 746

[Close]

BLAST of Lag0018052 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 3.8e-19
Identity = 48/136 (35.29%), Postives = 86/136 (63.24%), Query Frame = 0


Query: 391 IKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYA 450
           I TL SD GGE++ L+  +YL +H IS     P TP+ NG+SER++R +++M  +++S+A
Sbjct: 565 IGTLYSDNGGEFVVLR--DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHA 624

Query: 451 QLPSSFWGYAVEIAVYILNVVSSKSVS-KTPFELWRGRKASLPHFRIWGCPAHVLVA--N 510
            +P ++W YA  +AVY++N + +  +  ++PF+   G+  +    +++GC  +  +   N
Sbjct: 625 SVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYN 684

Query: 511 PKKLDSRSKLCLFVGY 524
             KL+ +SK C F+GY
Sbjct: 685 RHKLEDKSKQCAFMGY 698

[Close]

BLAST of Lag0018052 vs. ExPASy Swiss-Prot
Match: Q851Q6 (Probable GTP-binding protein OBGC2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0799700 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.9e-08
Identity = 48/112 (42.86%), Postives = 60/112 (53.57%), Query Frame = 0


Query: 219 IDMPE-RRINIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVADVGLV----AREGN 278
           ID+PE RR   M  + N+MRD SD+V + GQ GE+VSLELILRVVADVGLV    A +  
Sbjct: 232 IDVPEYRRRKAMVLSPNIMRDVSDRVLIHGQPGEEVSLELILRVVADVGLVGLPNAGKST 291

Query: 279 KVSYVCCSSFSPLDVDKAT---HVGRGGGGAFGDGETGVSHLLSAIVCTDLP 323
            +S +  +     D    T   ++GR G    GD   G     S     DLP
Sbjct: 292 LLSAITLARPDIADYPFTTLMPNLGRLG----GDPALGALQFSSEATLADLP 339

[Close]

BLAST of Lag0018052 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 3.3e-151
Identity = 333/715 (46.57%), Postives = 405/715 (56.64%), Query Frame = 0


Query: 51  VHDEYDIDCLAHL-----NENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSW 110
           V + +  +C  +L      E K+DLLV+ETC+VEND  +WILDSGAT+HVCSS +  SS+
Sbjct: 166 VDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSF 225

Query: 111 QQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVKE 170
           +QL+  EMTL+VGTG++ISA+ VGD K+FF  + +M L+N+  +  +   L   ++ + E
Sbjct: 226 KQLEDSEMTLKVGTGDVISARAVGDAKLFFGNK-FMFLENLYIVPKIKRNLV-SVSCLIE 285

Query: 171 HVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERR 230
           H+ ++ ++ N       Y   +             +A LEN                   
Sbjct: 286 HMYSINFSMNEA---FIYKNGVHI----------CSAKLEN------------------N 345

Query: 231 INIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSP 290
           + ++ P                                                      
Sbjct: 346 LYVLRP------------------------------------------------------ 405

Query: 291 LDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVNEMFKTAETQPKRQKVS- 350
                             + +  ++H                 EMF+TA TQ KRQ++S 
Sbjct: 406 -----------------NEAKAVLNH-----------------EMFRTANTQNKRQRISP 465

Query: 351 -QSTYLWHLRLGNINLNMIGRLVKNGLLSQLEDGTLPSCESGLEG--------------- 410
             +TYLWHLRLG+INL+ IGRLVKNGLL++L+D +LP CES LEG               
Sbjct: 466 NNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAK 525

Query: 411 ------------------------------------------------------------ 470
                                                                       
Sbjct: 526 EPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVEN 585

Query: 471 ---KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRS 530
              K IK LRSDRGGEY+ L+FQ+Y+IEH I SQL APGTPQQNGVSERRNRTLLDMVRS
Sbjct: 586 LLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRS 645

Query: 531 MMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLV 590
           MMSYAQLPSSFWGYAVE AV+ILN V SKSVS+TPFELWRGRK SL HFRIWGCPAHVLV
Sbjct: 646 MMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLV 705

Query: 591 ANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVL 650
            NPKKL+ RS+LC FVGYPKETRGG FFDPQEN+VFVSTNATFLEEDH+R HKP SK+VL
Sbjct: 706 TNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVL 744

Query: 651 SGLSGEATNESTRVGPSTRVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVV 681
           S    EAT+E      STRVVDE     GPS+R VDE +TSGQ+ PSQ  RMPRRSGRVV
Sbjct: 766 S----EATDE------STRVVDE----VGPSSR-VDETTTSGQSHPSQSLRMPRRSGRVV 744

[Close]

BLAST of Lag0018052 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 3.1e-149
Identity = 330/715 (46.15%), Postives = 404/715 (56.50%), Query Frame = 0


Query: 51  VHDEYDIDCLAHL-----NENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSW 110
           V + +  +C  +L      E+K+DLLV+ETC+VEND  +WILDSGAT+HVCSS +  SS+
Sbjct: 166 VDEHWKTNCPKYLVKKNEKESKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSF 225

Query: 111 QQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVKE 170
           +QL+  EMTL+VGTG++ISA+ VGD K+FF  + +M L+N+  +  +   L   ++ + E
Sbjct: 226 KQLEDSEMTLKVGTGDVISARAVGDAKLFFGNK-FMFLENLYIVPKIKRNLV-SVSCLIE 285

Query: 171 HVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERR 230
           H+ ++ ++ N       Y   +             +A LEN                   
Sbjct: 286 HMYSINFSMNEA---FIYKNGVHI----------CSAKLEN------------------N 345

Query: 231 INIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSP 290
           + ++ P                                                      
Sbjct: 346 LYVLRP------------------------------------------------------ 405

Query: 291 LDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVNEMFKTAETQPKRQKVS- 350
                             + +  ++H                 EMF+TA TQ KRQ++S 
Sbjct: 406 -----------------NEAKAVLNH-----------------EMFRTANTQNKRQRISP 465

Query: 351 -QSTYLWHLRLGNINLNMIGRLVKNGLLSQLEDGTLPSCESGLEG--------------- 410
             +TYLWHLRLG+INL+ IGRLVK+GLL++L+D +LP CES LEG               
Sbjct: 466 NNNTYLWHLRLGHINLDRIGRLVKDGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAK 525

Query: 411 ------------------------------------------------------------ 470
                                                                       
Sbjct: 526 EPLELIHSDLCGPMNVKARGSFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVEN 585

Query: 471 ---KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRS 530
              K IK  RSDRGGEY+ L FQ+Y+IEH I SQL APGTPQQNGVSERRNRTLLDMVRS
Sbjct: 586 LLSKKIKIFRSDRGGEYMDLIFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRS 645

Query: 531 MMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLV 590
           MMSYAQLPSSFWGYAVE AV+ILN V SKSVS+TPFELWRGRK SL HFRIWGCPAHVLV
Sbjct: 646 MMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLV 705

Query: 591 ANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVL 650
            NPKKL+ RS+LC FVGYPKETRGG FFDP+EN+VFVSTNATFLEEDH+R HKP SK+VL
Sbjct: 706 TNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRSKLVL 744

Query: 651 SGLSGEATNESTRVGPSTRVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVV 681
           S    EAT+E      STRVVDE     GPS+R VDE +TSGQ+ PSQ  RMPRRSGRVV
Sbjct: 766 S----EATDE------STRVVDE----VGPSSR-VDETTTSGQSHPSQSLRMPRRSGRVV 744

[Close]

BLAST of Lag0018052 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 8.8e-144
Identity = 328/697 (47.06%), Postives = 391/697 (56.10%), Query Frame = 0


Query: 65  ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELIS 124
           + K+DLLV+ETC+VENDD++WI+DSGAT+HVCSSF+G+SSW+QL+TGEMT+RVGTG ++S
Sbjct: 288 QGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVS 347

Query: 125 AKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVKEHVVNVLYARNSLVSWLAYG 184
           A  VG +++   +  ++LL+NV                   +VV  L  + +L+S     
Sbjct: 348 AIAVGGLRLCLQKS-FLLLENV-------------------YVVPDL--KRNLIS----- 407

Query: 185 TTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVR 244
                          +  +LE                        S T NV     +KV 
Sbjct: 408 ---------------VKCLLEQS---------------------YSLTFNV-----NKVF 467

Query: 245 VFGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGD 304
           ++    E  S +L             E N                               
Sbjct: 468 IYKNGVEICSAKL-------------ENN------------------------------- 527

Query: 305 GETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM 364
                       V   L S   +N EMFKTA TQ KR K+S  ++ +LWHLRLG+INLN 
Sbjct: 528 ----------LYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNR 587

Query: 365 IGRLVKNGLLSQLEDGTLPSCESGLEG--------------------------------- 424
           I RLVKNGLLS+LE+ +LP CES LEG                                 
Sbjct: 588 IERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKA 647

Query: 425 ---------------------------------------------KTIKTLRSDRGGEYL 484
                                                        KTIKT RSDRGGEY+
Sbjct: 648 RGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYM 707

Query: 485 GLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEI 544
            LKFQNYL+E  I SQL APGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+ 
Sbjct: 708 DLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQT 767

Query: 545 AVYILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGY 604
           AVYILN V SKSVS+TP +LW GRK SL HFRIWGCPAHVL  NPKKL+ RSKLCLFVGY
Sbjct: 768 AVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGY 827

Query: 605 PKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST 664
           PK TRGGYF+DP++NKVFVSTNATFLEEDH+REHKP SK+VL+ LS E T       PST
Sbjct: 828 PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTE------PST 851

Query: 665 RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISD 681
           RVV+EPS      TRVV   S++   QP Q  R PRRSGRV   P RY+SL ET  VISD
Sbjct: 888 RVVEEPSA----LTRVVHVGSSTRTHQP-QSLREPRRSGRVTNLPIRYMSLTETLTVISD 851

[Close]

BLAST of Lag0018052 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 8.8e-144
Identity = 328/697 (47.06%), Postives = 391/697 (56.10%), Query Frame = 0


Query: 65  ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELIS 124
           + K+DLLV+ETC+VENDD++WI+DSGAT+HVCSSF+G+SSW+QL+TGEMT+RVGTG ++S
Sbjct: 288 QGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVS 347

Query: 125 AKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVKEHVVNVLYARNSLVSWLAYG 184
           A  VG +++   +  ++LL+NV                   +VV  L  + +L+S     
Sbjct: 348 AIAVGGLRLCLQKS-FLLLENV-------------------YVVPDL--KRNLIS----- 407

Query: 185 TTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVR 244
                          +  +LE                        S T NV     +KV 
Sbjct: 408 ---------------VKCLLEQS---------------------YSLTFNV-----NKVF 467

Query: 245 VFGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGD 304
           ++    E  S +L             E N                               
Sbjct: 468 IYKNGVEICSAKL-------------ENN------------------------------- 527

Query: 305 GETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM 364
                       V   L S   +N EMFKTA TQ KR K+S  ++ +LWHLRLG+INLN 
Sbjct: 528 ----------LYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNR 587

Query: 365 IGRLVKNGLLSQLEDGTLPSCESGLEG--------------------------------- 424
           I RLVKNGLLS+LE+ +LP CES LEG                                 
Sbjct: 588 IERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKA 647

Query: 425 ---------------------------------------------KTIKTLRSDRGGEYL 484
                                                        KTIKT RSDRGGEY+
Sbjct: 648 RGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYM 707

Query: 485 GLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEI 544
            LKFQNYL+E  I SQL APGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+ 
Sbjct: 708 DLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQT 767

Query: 545 AVYILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGY 604
           AVYILN V SKSVS+TP +LW GRK SL HFRIWGCPAHVL  NPKKL+ RSKLCLFVGY
Sbjct: 768 AVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGY 827

Query: 605 PKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST 664
           PK TRGGYF+DP++NKVFVSTNATFLEEDH+REHKP SK+VL+ LS E T       PST
Sbjct: 828 PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTE------PST 851

Query: 665 RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISD 681
           RVV+EPS      TRVV   S++   QP Q  R PRRSGRV   P RY+SL ET  VISD
Sbjct: 888 RVVEEPSA----LTRVVHVGSSTRTHQP-QSLREPRRSGRVTNLPIRYMSLTETLTVISD 851

[Close]

BLAST of Lag0018052 vs. ExPASy TrEMBL
Match: A0A5A7V4M1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00930 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 8.8e-144
Identity = 328/697 (47.06%), Postives = 391/697 (56.10%), Query Frame = 0


Query: 65  ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELIS 124
           + K+DLLV+ETC+VENDD++WI+DSGAT+HVCSSF+G+SSW+QL+TGEMT+RVGTG ++S
Sbjct: 405 QGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVS 464

Query: 125 AKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVKEHVVNVLYARNSLVSWLAYG 184
           A  VG +++   +  ++LL+NV                   +VV  L  + +L+S     
Sbjct: 465 AIAVGGLRLCLQKS-FLLLENV-------------------YVVPDL--KRNLIS----- 524

Query: 185 TTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVR 244
                          +  +LE                        S T NV     +KV 
Sbjct: 525 ---------------VKCLLEQS---------------------YSLTFNV-----NKVF 584

Query: 245 VFGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGD 304
           ++    E  S +L             E N                               
Sbjct: 585 IYKNGVEICSAKL-------------ENN------------------------------- 644

Query: 305 GETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM 364
                       V   L S   +N EMFKTA TQ KR K+S  ++ +LWHLRLG+INLN 
Sbjct: 645 ----------LYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNR 704

Query: 365 IGRLVKNGLLSQLEDGTLPSCESGLEG--------------------------------- 424
           I RLVKNGLLS+LE+ +LP CES LEG                                 
Sbjct: 705 IERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKA 764

Query: 425 ---------------------------------------------KTIKTLRSDRGGEYL 484
                                                        KTIKT RSDRGGEY+
Sbjct: 765 RGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYM 824

Query: 485 GLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEI 544
            LKFQNYL+E  I SQL APGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+ 
Sbjct: 825 DLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQT 884

Query: 545 AVYILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGY 604
           AVYILN V SKSVS+TP +LW GRK SL HFRIWGCPAHVL  NPKKL+ RSKLCLFVGY
Sbjct: 885 AVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGY 944

Query: 605 PKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST 664
           PK TRGGYF+DP++NKVFVSTNATFLEEDH+REHKP SK+VL+ LS E T       PST
Sbjct: 945 PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTE------PST 968

Query: 665 RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISD 681
           RVV+EPS      TRVV   S++   QP Q  R PRRSGRV   P RY+SL ET  VISD
Sbjct: 1005 RVVEEPSA----LTRVVHVGSSTRTHQP-QSLREPRRSGRVTNLPIRYMSLTETLTVISD 968

[Close]

BLAST of Lag0018052 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 47.0 bits (110), Expect = 7.1e-05
Identity = 27/82 (32.93%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 436 NRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVS-KTPFELWRGRKASLPHF 495
           NRT+++ VRSM+    LP +F   A   AV+I+N   S +++   P E+W     +  + 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 496 RIWGCPAHVLVANPKKLDSRSK 517
           R +GC A++   +  KL  R+K
Sbjct: 62  RRFGCVAYI-HCDEGKLKPRAK 82

The following BLAST results are available for this feature:

BLAST of Lag0018052 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025945.1	6.9e-151	46.57	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0035907.1	6.4e-149	46.15	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0048404.1	1.8e-143	47.06	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	1.8e-143	47.06	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	1.8e-143	47.06	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Lag0018052 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	9.0e-37	34.75	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	3.0e-24	35.87	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	2.9e-19	30.67	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	3.8e-19	35.29	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q851Q6	3.9e-08	42.86	Probable GTP-binding protein OBGC2 OS=Oryza sativa subsp. japonica OX=39947 GN=O...	[more]

BLAST of Lag0018052 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZD0	3.3e-151	46.57	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7T2V9	3.1e-149	46.15	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]
A0A5A7SMH8	8.8e-144	47.06	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	8.8e-144	47.06	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7V4M1	8.8e-144	47.06	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0093...	[more]

BLAST of Lag0018052 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00710.1	7.1e-05	32.93	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 334..389 e-value: 5.0E-7 score: 29.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 382..496 e-value: 1.6E-23 score: 85.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 567..620
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 567..623
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 388..680
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 392..488 score: 15.115891
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 388..496

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0018052.1	Lag0018052.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding