Lag0018000 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0018000
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr5: 12980466 .. 12981799 (-)
RNA-Seq Expression	Lag0018000
Synteny	Lag0018000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAGACTAGAGCTAGGAAAGAGAGGGAGAGTGAAGAGAAGGAGGTACCGGTCACACTGGAAGTGCAAAAAGGGAAAACTAAGAAGAAAAGAACGCCAGAAGAGAAGGAGGCGAAGCGAAGACGGAGGCAGCAGAGGGCTGCGGAACAAGAAGTCATCCAAGAAACAGAGGCTGTTCAGAATCTTGAGACAGTACCGATAGTTTCTGCTACGGTTCAAGAAGGAAATACTGAGAAGGAGCATGAGACAGAGGTCGAAAGACAAGTCGTAGGTATGCCTGAAAAAGAGAAAACACCACAGCCGGTGCAGGAGGCTCATGTTGAAATCATTATGCCTGAACCGCCCAAGCGCCGCCGCATTAAGAGGAAGGCGGGTCGCGTGAGGGTGATTCGGAACACTCCATCCCCTCCGACGTCGGACTCTGAGGAAGAAAAAAGGGAAGCTGAGAATAAGGAAAAAGAAGAAGAGGCAAGAAAGACAGAAGAAGAGCGCTTGCACAAACAGAGAGAAAGCAAGGGCAAAGGAATTGTCGAAGCATCGGGAGAAATTGAGGAGCCGAGGGCACCATTCATTCGCTTCGTCAACGATCTTGCTCGAGCAAAATACCAGGAGGTGCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCGATTAGTTTGTTTCATTTACTATCTACGAGTTTTAGGGCATAAAACCCAACAGTTGGATGATATTTTTTTCATATAGAAGTGTGTTTCTCTTGTTTAACAGGTTTAAAATTTTTTGGGTTAGTCATATGTATATCGTTATGCTGTCGAAATTTCTAGAGCAACCAGTTAGAATTAGGATAGAGGCTTTAGTCATTTGGCTTATGCTCATACCTTTTTTTTTATTCCATTGTAGATTATAGATTTACACAACAAGAGCTTCCTTCTTGCAAACCAATTTTAACACTAGAATGGGTATCTCTGAGAAAGATTTGAATTAATTTTTTACTTTGCTCCCTGACGTAGCATTATACACTATTTTTATTAGTGTGACTATTTGATTTCAAGTTATAACATCCTTCGTTGTTGTTGGCATTATCTTTATCCACATAGGCATTGCTTCTTTATTTGCATTAGAACAAGTACTTTCTCATCTGCCTCGTACTCGTAAATATGATACAATGCAGTTTTGATTTATAAATTTATTTTTGGACTATTAAATGCGTAACTTGAGCCACATGCTTTCCATGATATTCAGGTTGTTGAAGTTGTGGGACCACTACGACAATGA

mRNA sequence

ATGGCTAAGACTAGAGCTAGGAAAGAGAGGGAGAGTGAAGAGAAGGAGGTACCGGTCACACTGGAAGTGCAAAAAGGGAAAACTAAGAAGAAAAGAACGCCAGAAGAGAAGGAGGCGAAGCGAAGACGGAGGCAGCAGAGGGCTGCGGAACAAGAAGTCATCCAAGAAACAGAGGCTGTTCAGAATCTTGAGACAGTACCGATAGTTTCTGCTACGGTTCAAGAAGGAAATACTGAGAAGGAGCATGAGACAGAGGTCGAAAGACAAGTCGTAGGTATGCCTGAAAAAGAGAAAACACCACAGCCGGTGCAGGAGGCTCATGTTGAAATCATTATGCCTGAACCGCCCAAGCGCCGCCGCATTAAGAGGAAGGCGGGTCGCGTGAGGGTGATTCGGAACACTCCATCCCCTCCGACGTCGGACTCTGAGGAAGAAAAAAGGGAAGCTGAGAATAAGGAAAAAGAAGAAGAGGCAAGAAAGACAGAAGAAGAGCGCTTGCACAAACAGAGAGAAAGCAAGGGCAAAGGAATTGTCGAAGCATCGGGAGAAATTGAGGAGCCGAGGGCACCATTCATTCGCTTCGTCAACGATCTTGCTCGAGCAAAATACCAGGAGGTTGTTGAAGTTGTGGGACCACTACGACAATGA

Coding sequence (CDS)

ATGGCTAAGACTAGAGCTAGGAAAGAGAGGGAGAGTGAAGAGAAGGAGGTACCGGTCACACTGGAAGTGCAAAAAGGGAAAACTAAGAAGAAAAGAACGCCAGAAGAGAAGGAGGCGAAGCGAAGACGGAGGCAGCAGAGGGCTGCGGAACAAGAAGTCATCCAAGAAACAGAGGCTGTTCAGAATCTTGAGACAGTACCGATAGTTTCTGCTACGGTTCAAGAAGGAAATACTGAGAAGGAGCATGAGACAGAGGTCGAAAGACAAGTCGTAGGTATGCCTGAAAAAGAGAAAACACCACAGCCGGTGCAGGAGGCTCATGTTGAAATCATTATGCCTGAACCGCCCAAGCGCCGCCGCATTAAGAGGAAGGCGGGTCGCGTGAGGGTGATTCGGAACACTCCATCCCCTCCGACGTCGGACTCTGAGGAAGAAAAAAGGGAAGCTGAGAATAAGGAAAAAGAAGAAGAGGCAAGAAAGACAGAAGAAGAGCGCTTGCACAAACAGAGAGAAAGCAAGGGCAAAGGAATTGTCGAAGCATCGGGAGAAATTGAGGAGCCGAGGGCACCATTCATTCGCTTCGTCAACGATCTTGCTCGAGCAAAATACCAGGAGGTTGTTGAAGTTGTGGGACCACTACGACAATGA

Protein sequence

MAKTRARKERESEEKEVPVTLEVQKGKTKKKRTPEEKEAKRRRRQQRAAEQEVIQETEAVQNLETVPIVSATVQEGNTEKEHETEVERQVVGMPEKEKTPQPVQEAHVEIIMPEPPKRRRIKRKAGRVRVIRNTPSPPTSDSEEEKREAENKEKEEEARKTEEERLHKQRESKGKGIVEASGEIEEPRAPFIRFVNDLARAKYQEVVEVVGPLRQ

Homology

The following BLAST results are available for this feature:

BLAST of Lag0018000 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0018000 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0018000 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0018000 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 139..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0018000.1	Lag0018000.1	mRNA