Lag0017783 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0017783
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Description(-)-germacrene D synthase-like isoform X2
Locationchr5: 8711146 .. 8714673 (-)
RNA-Seq ExpressionLag0017783
SyntenyLag0017783
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCAGGCAATAATGCCTCGTTCAATGATAGTGTTCCTCGTAGATCTGCAAACTTTCAACCAAGTTCTTGGGGAGATTATTTCCTTTATTACGATTCCAACCATCCGGTACGTATTATTTTGGATTAAGATACTATTTTGATTCCTACTTTAAAACTCATTTCATTTTGTTTACGTACTTTCAAATAATGTTCATTTATATTTTAAATAAATTTTAAAATTAGTATTTATTGAGAGTAATGAGTACTAAATTTATTTATTTGAAAATATCAAAATTAAAATAGAACAAGTCATAAAGTCCTCTAATCAAAATGATATTTCAAACAATATTTTATTTTCATATTTGCGTTTTTGTTGTTTCAATTGAGGAGGCGTTTTTTGGTTAAAATTTTATTTTGGTATTTGAACTTTCATTTTTATTTCATTTTGGTTTCTAAATTTTCAAAATATTTATTTAGTCCCAAACTTGAAAAGTAATCATTTTAATACCTAAGCCCCATTTGATAACCATTTGGTTTTTGGTTTTTTGTTTTTGAAAATTATACTTGTTTTCTCTCAATTTCCTTGTCATGGTTTTCATGTTTGTCAAGGATACAATTGAATTCCTAGCCAAATTTCAAAAACAAAATCAAGTTTTTGAAAACTACTTTTTTTTAGTTTTCCCAATTAAAACATGGAAAGAAGATATTAGAAAAAACAAAGAAACTTGTGGGTGAAAATAGTGTTTATAAGCTTAATTTTCAAAAACCAAATAGTTATCAAACGAGGCCTAAACTTTTATCATTTTTTTATTTTAGTACTTGAACTTTTTAAAAATAACCATTTTGGTTCCTAAACTTTTATATTGTGTATTTTAGTCCGTAAATTCTTTTTGAAAACTAAGGCCCCGTTTGATAATCATTTGGTTTTTTTTTTTGTTTTTGGTTTTTAAGCTTATAAACACACTCCCAACTCTAAGTTTCTTTGTTTTTTCACCTATCTTCTTCCCACGTTTTCAAAAACCAAGCCAATCTTTGAAAACTAAAAAAATTAGTTTTCAAAAACTTGTTTTTGTTTTTAGAATTTGGTTAGGAATTTAAGTGTGTCTTTAACAAAAATGAAAACCATGGTGAGGAAATTTAAAGAAAACAAGCCTAATTTTCAAAAACCAAAAACCAAAAACTAAGGCCCCGTTTGATAACCATTTCGTTTTTGGTTTTTGGTTTTTCAAAATTAAGCCTATAAACACTATTTTTACTCACAAGCTTCTTTGTTTTTTATCTACATCATTTCCCATGTTTTCAAAAACCAAGCTAAATTTTGAAAAAAAAAAAAAAGTAGTTTTCAAAAACTTGTTTTTGTTTTTGGAATTTGGCTAGGAACTCAAATGTTTCCTTAACAAATATGAAAACCATTGTAGGAAGATTGAGAGATTATAGGCTTAATTTTCAAAAACCAAAAACAAAAAACGAAATGGTTATCAAACGGGGCCTAAATGGTTATCAAACCGGTCCTAAACATTTTGATACTTGTATATTATTTTTCACCCAAAATTTTCTTACCTAACACTTTTGTTAATTCCTATATGTTTATGTACATACTTTGTTAAAATCAAAATAGTGATAATTAAGGACGAAATGATTATACTTTTTTTAAGTTCCAATACTAACTAAAATAGACATTTTGAAAGTTTAAGAGCTAAAATGAAAGAAACCTACCGGTTTAATGAATATTTCCGTTTCAAAAAAAAAAATGAAAGAAACTTAAAGGTTTAATTGACCCAAATGAGTATATTAAAAGTTTAAGGACCAAAATGAAAAAATTTCGAGAGTTTAGGATAAAAATGGAATTTAAACTTTCCCTTCTTTTTCAAAGAGAACAAAAATGTATGGCAGGTGAAGTCATCAATTTTTTGTTTGTTATTAAACTATATGGGCTTCCATGGATCCTCAACATGCCCCACCAATCTTTCTTATATATTGTTGGGTCTCCACCAATCTTTTCGATGTGGGATCCTCAACATTTGTCACTCTTTCCTTTTACTTATAAAAAATATGTGTGATAAATGATAACTACCATTATCCTGTTCTATCTAATAAGAAGATTAAAAAAGGGCAGTGTTTGAAGAGAACCTACTGTACAATAGGTCTTTCTTTCCCCTTTTGAAACTCCTATATTGAGGTACATAATATTTTCGGATATGTTTTTTACTTCGACAAAATATTTCTTTTGTTTGTGGGATATAAATATTATGCAGCTTAATTTTGTTGGTGGACTCTCAAAAGTATCTAATGGTTTCTAAACTTTCATTTTTGTATCTAATAAATTCTTGACAAATTAAAATTTTAAATATTAAGACCCCGTTTGATAACCATTTTATTTTTTGTTTTTTGTTTTTGAAAATTATGCTTGTTTTCTCCTAAATTCCCTACCATGTCTTTCATCTTAATTAAAGTTGCATTTGAATTCGTAGCCAAATTTTAAAAACAAAAACAAGTTTTTGAAGACTACTTTTTTTTTTCTTTTCAAAATTGGACTTGGTTTTTGAAAACAATGTAGAAGATTGATACTAAAACCAAGAAACTTATTGGGTGTGGAAGTATGTGTGCATAAGCTTAATTTTCAAAAACCAAAAACCAAAAACCAAATGGTTATCAAATGGGGCCTTCAATCTATTAGATATAAATTTGAATTTTTTGCCTAATGAAATCCAAAATTTCAATTTAGTGTCCAGTAGATTTGTGAATTTAAAAAAATTGAAATCTTAGACCATGTTTGACAATCATTTGGTTTTTGGTTTTTAAAAATTAAGCTTGTTTTCTGGCAAGTTTCTTATATCGGTTTATTTATTTATTTATTTTTGAACAAATCTTATAATGGTTTTATTCTTTGTTAATGACACATATTTTATATGCTGGTCAATTTTCAAAAGCAAAAACAAGTTTTTGAATTTTTTTTTTTATTTTAGTTTTCAAAATTTGACTTGATTTTTGAAAACATTGAGGGAAGGTAGATAACAAAACCAAAAAAACTTATAAGTAGAAGTAGTGCTTTTTTTTTTTTTTTTGTTTTTGAGAAGATAAAAGTAGTGCTTTTAAACTTAATTTTCAAAAACCAAATAGTTATGAAATGAGTCTTAGAAATTATGTAATTTTGAAAGTTCAGAAATCAAATAGATATAACTCTTAAAGTTTAAAGACTAAATTTGTAATTTAACCTATTACGAAAAATCAGGAGGATGAGGATATGGTCAGGGAACAACTTGGAAAACTGAAAGAAGAAGTGAGAAGCATGTTGGCAGCTGCTGAAAAATGTTCAGAAAAACTAAGTTTAATTGACTCAATTCAGCGCCTAGGTCTGTCTTACCACTTTGAAGATGAAATTAATGAAATTCTAGAGTCCATGCAAAAGCTTTGCAATGTTGACAATGACGAGGATATTTACACTGTTGCTCTTAGATTTCGATTGCTTAGACAACAAGGTTACTTCGTTTCTTGCGGTAAGTCTCTCGATCAGAGAAATTTCAAAGAATTAGGTTATGTTTGA

mRNA sequence

ATGGCACCAGGCAATAATGCCTCGTTCAATGATAGTGTTCCTCGTAGATCTGCAAACTTTCAACCAAGTTCTTGGGGAGATTATTTCCTTTATTACGATTCCAACCATCCGGAGGATGAGGATATGGTCAGGGAACAACTTGGAAAACTGAAAGAAGAAGTGAGAAGCATGTTGGCAGCTGCTGAAAAATGTTCAGAAAAACTAAGTTTAATTGACTCAATTCAGCGCCTAGGTCTGTCTTACCACTTTGAAGATGAAATTAATGAAATTCTAGAGTCCATGCAAAAGCTTTGCAATGTTGACAATGACGAGGATATTTACACTGTTGCTCTTAGATTTCGATTGCTTAGACAACAAGGTTACTTCGTTTCTTGCGGTAAGTCTCTCGATCAGAGAAATTTCAAAGAATTAGGTTATGTTTGA

Coding sequence (CDS)

ATGGCACCAGGCAATAATGCCTCGTTCAATGATAGTGTTCCTCGTAGATCTGCAAACTTTCAACCAAGTTCTTGGGGAGATTATTTCCTTTATTACGATTCCAACCATCCGGAGGATGAGGATATGGTCAGGGAACAACTTGGAAAACTGAAAGAAGAAGTGAGAAGCATGTTGGCAGCTGCTGAAAAATGTTCAGAAAAACTAAGTTTAATTGACTCAATTCAGCGCCTAGGTCTGTCTTACCACTTTGAAGATGAAATTAATGAAATTCTAGAGTCCATGCAAAAGCTTTGCAATGTTGACAATGACGAGGATATTTACACTGTTGCTCTTAGATTTCGATTGCTTAGACAACAAGGTTACTTCGTTTCTTGCGGTAAGTCTCTCGATCAGAGAAATTTCAAAGAATTAGGTTATGTTTGA

Protein sequence

MAPGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQKLCNVDNDEDIYTVALRFRLLRQQGYFVSCGKSLDQRNFKELGYV
Homology
[Close]
BLAST of Lag0017783 vs. NCBI nr
Match: XP_022143531.1 ((-)-germacrene D synthase-like isoform X1 [Momordica charantia])

HSP 1 Score: 171.8 bits (434), Expect = 4.2e-39
Identity = 94/122 (77.05%), Postives = 100/122 (81.97%), Query Frame = 0 

Query: 5   NNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKC 64
           NN S NDSV RRSANF+PS WGDYFL Y  N   D DMVR+QL + +EEVR ML AAEKC
Sbjct: 13  NNGSSNDSVLRRSANFEPSLWGDYFLSYPINTVLD-DMVRKQLEEQREEVRRMLEAAEKC 72

Query: 65  SEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCNVDNDEDIYTVALRFRLLRQQGYFV 124
           SEKLSLIDSIQRLGLSYHFE EINEILE MQ   CN+D+DEDIY VALRFRLLRQQGY V
Sbjct: 73  SEKLSLIDSIQRLGLSYHFEGEINEILEHMQNDSCNLDDDEDIYIVALRFRLLRQQGYSV 132

Query: 125 SC 126
           SC
Sbjct: 133 SC 133

[Close]
BLAST of Lag0017783 vs. NCBI nr
Match: XP_022143532.1 ((-)-germacrene D synthase-like isoform X2 [Momordica charantia])

HSP 1 Score: 171.8 bits (434), Expect = 4.2e-39
Identity = 94/122 (77.05%), Postives = 100/122 (81.97%), Query Frame = 0 

Query: 5   NNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKC 64
           NN S NDSV RRSANF+PS WGDYFL Y  N   D DMVR+QL + +EEVR ML AAEKC
Sbjct: 13  NNGSSNDSVLRRSANFEPSLWGDYFLSYPINTVLD-DMVRKQLEEQREEVRRMLEAAEKC 72

Query: 65  SEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCNVDNDEDIYTVALRFRLLRQQGYFV 124
           SEKLSLIDSIQRLGLSYHFE EINEILE MQ   CN+D+DEDIY VALRFRLLRQQGY V
Sbjct: 73  SEKLSLIDSIQRLGLSYHFEGEINEILEHMQNDSCNLDDDEDIYIVALRFRLLRQQGYSV 132

Query: 125 SC 126
           SC
Sbjct: 133 SC 133

[Close]
BLAST of Lag0017783 vs. NCBI nr
Match: XP_022143530.1 (valencene synthase-like isoform X2 [Momordica charantia])

HSP 1 Score: 160.6 bits (405), Expect = 9.7e-36
Identity = 89/126 (70.63%), Postives = 99/126 (78.57%), Query Frame = 0 

Query: 1   MAPGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAA 60
           MAP +  S +  + RRSANF+PS WGDYFL    N   D DMVR+QL + +EEVR ML A
Sbjct: 4   MAPNDGYSNDGVLRRRSANFEPSLWGDYFLSSPVNTVLD-DMVRKQLEEQREEVRRMLEA 63

Query: 61  AEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCNVDNDEDIYTVALRFRLLRQQ 120
           AEKCSEKLSLIDSIQRLG+SYHFE EINEILE MQ   CN+D+DEDIY VALRFRLLRQQ
Sbjct: 64  AEKCSEKLSLIDSIQRLGISYHFEGEINEILEHMQNDSCNLDDDEDIYIVALRFRLLRQQ 123

Query: 121 GYFVSC 126
           GY VSC
Sbjct: 124 GYSVSC 128

[Close]
BLAST of Lag0017783 vs. NCBI nr
Match: XP_022143529.1 ((-)-germacrene D synthase-like isoform X1 [Momordica charantia])

HSP 1 Score: 160.6 bits (405), Expect = 9.7e-36
Identity = 89/126 (70.63%), Postives = 99/126 (78.57%), Query Frame = 0 

Query: 1   MAPGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAA 60
           MAP +  S +  + RRSANF+PS WGDYFL    N   D DMVR+QL + +EEVR ML A
Sbjct: 4   MAPNDGYSNDGVLRRRSANFEPSLWGDYFLSSPVNTVLD-DMVRKQLEEQREEVRRMLEA 63

Query: 61  AEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCNVDNDEDIYTVALRFRLLRQQ 120
           AEKCSEKLSLIDSIQRLG+SYHFE EINEILE MQ   CN+D+DEDIY VALRFRLLRQQ
Sbjct: 64  AEKCSEKLSLIDSIQRLGISYHFEGEINEILEHMQNDSCNLDDDEDIYIVALRFRLLRQQ 123

Query: 121 GYFVSC 126
           GY VSC
Sbjct: 124 GYSVSC 128

[Close]
BLAST of Lag0017783 vs. NCBI nr
Match: XP_022143456.1 ((-)-germacrene D synthase-like isoform X1 [Momordica charantia])

HSP 1 Score: 158.7 bits (400), Expect = 3.7e-35
Identity = 90/125 (72.00%), Postives = 102/125 (81.60%), Query Frame = 0 

Query: 2   APGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAA 61
           AP N+ S ND V RRSANFQPS WGDYFL+   N   D DMV ++L KLKEEVRSMLAAA
Sbjct: 11  APDNDPS-NDGVLRRSANFQPSVWGDYFLFSHINTDMD-DMVGKKLQKLKEEVRSMLAAA 70

Query: 62  EKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQKLCNV-DNDEDIYTVALRFRLLRQQG 121
           EKCS+KLSLIDSIQRLGLS+HFE+EINEILE MQ   ++ D+DED+  VALRFRLLRQ+G
Sbjct: 71  EKCSKKLSLIDSIQRLGLSHHFEEEINEILEQMQNXRSLNDDDEDVDIVALRFRLLRQRG 130

Query: 122 YFVSC 126
           Y VSC
Sbjct: 131 YSVSC 133

[Close]
BLAST of Lag0017783 vs. ExPASy Swiss-Prot
Match: Q6Q3H3 ((-)-germacrene D synthase OS=Vitis vinifera OX=29760 GN=VIT_19s0014g04930 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-28
Identity = 73/141 (51.77%), Postives = 94/141 (66.67%), Query Frame = 0 

Query: 1   MAPGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAA 60
           +AP  N S    V RR ANF PS WGD+FL Y S     +D +++ + +LKEEVR ML A
Sbjct: 10  LAPSKNLS--PEVGRRCANFHPSIWGDHFLSYASEFTNTDDHLKQHVQQLKEEVRKMLMA 69

Query: 61  AEKCS-EKLSLIDSIQRLGLSYHFEDEINEILESMQKLCNVDNDEDIYTVALRFRLLRQQ 120
           A+  S +KL LID+IQRLG++YHFE EI+E+L+ M     V  +ED+YT +LRFRLLRQQ
Sbjct: 70  ADDDSAQKLLLIDAIQRLGVAYHFESEIDEVLKHMFDGSVVSAEEDVYTASLRFRLLRQQ 129

Query: 121 GYFVSC----GKSLDQRNFKE 137
           GY VSC        ++ NFKE
Sbjct: 130 GYHVSCDLFNNFKDNEGNFKE 148

[Close]
BLAST of Lag0017783 vs. ExPASy Swiss-Prot
Match: U3LVL5 (Germacrene D synthase OS=Lavandula angustifolia OX=39329 GN=GERDS PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.4e-23
Identity = 60/112 (53.57%), Postives = 77/112 (68.75%), Query Frame = 0 

Query: 15  RRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLA-AAEKCSEKLSLIDS 74
           RRSA F P+ WGDYFL Y+S++ E      E+  K KE V+ +L  A    ++K+ LID+
Sbjct: 21  RRSAKFHPTVWGDYFLAYNSDNTEITAAEHEEHAKQKEMVKKLLTLAPNDPTDKMQLIDA 80

Query: 75  IQRLGLSYHFEDEINEILESMQKLCNVDNDEDIYTVALRFRLLRQQGYFVSC 126
           IQRLGL YHFE EI EIL+S+    N   D+D++TVALRFRLLRQ GY V+C
Sbjct: 81  IQRLGLQYHFEKEIQEILQSIH--ANFKADKDLHTVALRFRLLRQHGYNVAC 130

[Close]
BLAST of Lag0017783 vs. ExPASy Swiss-Prot
Match: B9SBV6 (Probable terpene synthase 3 OS=Ricinus communis OX=3988 GN=TPS3 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.4e-23
Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 0 

Query: 15  RRSANFQPSSWGDYFLYYDSNHPEDE--DMVREQLGKLKEEVRSM-LAAAEKCSEKLSLI 74
           RR+A F PS WGDYF+    N P+++   + +EQ   L+EEVR M ++  +K S KL LI
Sbjct: 15  RRTAQFHPSVWGDYFI---KNAPDNKMVSIWKEQAKVLEEEVRRMIISETQKPSGKLKLI 74

Query: 75  DSIQRLGLSYHFEDEINEILESMQKLCNVDNDEDIYTVALRFRLLRQQGYFVS 125
           D IQRLG++YHFE+EI E++E  Q   N D+DED+Y +ALRFRLLRQQGY VS
Sbjct: 75  DVIQRLGIAYHFEEEIGEVIE--QVYSNYDDDEDLYDIALRFRLLRQQGYNVS 122

[Close]
BLAST of Lag0017783 vs. ExPASy Swiss-Prot
Match: B9SCB6 (Probable terpene synthase 2 OS=Ricinus communis OX=3988 GN=TPS2 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.9e-22
Identity = 55/120 (45.83%), Postives = 84/120 (70.00%), Query Frame = 0 

Query: 7   ASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSE 66
           ++   +  R  A+F P+ WGD FL   +   + ED + +Q+ +LKEEV+ M+A+A++ S+
Sbjct: 9   SNLKPNTTRHLASFHPNIWGDRFLSCAAESTDIEDDMEQQVERLKEEVKKMIASADEPSQ 68

Query: 67  KLSLIDSIQRLGLSYHFEDEINEILESMQKL-CNVDNDEDIYTVALRFRLLRQQGYFVSC 126
            L+LID +QRLG+SYHFE EI E L+ +  +  + D D+D+++VALRFRLLR+QG  VSC
Sbjct: 69  ILNLIDLLQRLGVSYHFEKEIEEALQQVLNMNSDSDKDDDLHSVALRFRLLREQGLNVSC 128

[Close]
BLAST of Lag0017783 vs. ExPASy Swiss-Prot
Match: J9RLZ7 (Germacrene C/D synthase OS=Valeriana officinalis OX=19953 GN=TPS1 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-21
Identity = 61/127 (48.03%), Postives = 81/127 (63.78%), Query Frame = 0 

Query: 15  RRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAA---AEKCSEKLSLI 74
           R +ANF  S WGD+FL Y SN  +  D V +Q  +LKEE+R  L      E+  E+L LI
Sbjct: 22  RPNANFHKSVWGDHFLKYASNPEQINDGVDKQHKQLKEELRKKLVVNVNIERAEEQLKLI 81

Query: 75  DSIQRLGLSYHFEDEINEILESMQKLCNVD-NDEDIYTVALRFRLLRQQGYFVSCG---- 133
           D+IQRLG++YHF  EI  +L +  +L N   +D+D+Y  +LRFRLLRQQGY VSC     
Sbjct: 82  DAIQRLGVAYHFRTEIASVLNNQLELWNNKVDDDDLYLTSLRFRLLRQQGYNVSCAVFEK 141

The following BLAST results are available for this feature:
BLAST of Lag0017783 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022143531.14.2e-3977.05(-)-germacrene D synthase-like isoform X1 [Momordica charantia][more]
XP_022143532.14.2e-3977.05(-)-germacrene D synthase-like isoform X2 [Momordica charantia][more]
XP_022143530.19.7e-3670.63valencene synthase-like isoform X2 [Momordica charantia][more]
XP_022143529.19.7e-3670.63(-)-germacrene D synthase-like isoform X1 [Momordica charantia][more]
XP_022143456.13.7e-3572.00(-)-germacrene D synthase-like isoform X1 [Momordica charantia][more]
BLAST of Lag0017783 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6Q3H32.7e-2851.77(-)-germacrene D synthase OS=Vitis vinifera OX=29760 GN=VIT_19s0014g04930 PE=1 S... [more]
U3LVL54.4e-2353.57Germacrene D synthase OS=Lavandula angustifolia OX=39329 GN=GERDS PE=1 SV=1[more]
B9SBV64.4e-2354.87Probable terpene synthase 3 OS=Ricinus communis OX=3988 GN=TPS3 PE=3 SV=1[more]
B9SCB62.9e-2245.83Probable terpene synthase 2 OS=Ricinus communis OX=3988 GN=TPS2 PE=3 SV=1[more]
J9RLZ71.4e-2148.03Germacrene C/D synthase OS=Valeriana officinalis OX=19953 GN=TPS1 PE=1 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10Farnesyl Diphosphate Synthasecoord: 22..61
e-value: 1.1E-31
score: 111.8
IPR001906Terpene synthase, N-terminal domainPFAMPF01397Terpene_synthcoord: 25..126
e-value: 2.0E-30
score: 105.9
IPR036965Terpene synthase, N-terminal domain superfamilyGENE3D1.50.10.130coord: 62..125
e-value: 1.1E-31
score: 111.8
NoneNo IPR availablePANTHERPTHR31225OS04G0344100 PROTEIN-RELATEDcoord: 13..127
NoneNo IPR availablePANTHERPTHR31225:SF111TERPENE SYNTHASE 2-RELATEDcoord: 13..127
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILY48239Terpenoid cyclases/Protein prenyltransferasescoord: 21..126

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0017783.1Lag0017783.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016102 diterpenoid biosynthetic process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0010333 terpene synthase activity
molecular_function GO:0016829 lyase activity