Lag0017774 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017774
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ribonuclease H
Location	chr5: 8566290 .. 8567496 (+)
RNA-Seq Expression	Lag0017774
Synteny	Lag0017774

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCACACTGCAGAATCAGGGACGAGATCGAAGGGAAAGAAGACTGACAGCATGACCAGCAAGATCAGGGGGCTCAAACCTACTGATCGTACAATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGACGTGACTACCTAGTTTCTACCCCAAGCTACGGTCATACTAAGACCGACCTGAGGAATCTGATCGAGGGGAAACGCAGAAGTGCCAAAACTGTCGAATCCAAGGCCAGAGCTGTTGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAAGGCTAGGTTGGTCGAGGCCGAGGCCAAGAAGAACAACCTCCCTTTGAAGACTGAGCTTCTGAACGCACTAAAGGAGCTCGGAAATCCACAGAGAGACCTGCAGGAGTCAAAGGACCTTGGAGACCCAGACTTGGAAGAACTAGTCGACCAAGTCGACCCGCCCTTCATAGAAGAAGTCATGAAAGCGCCGAGGTGCCCCAAAAGTTCAAGGTACCCACGTTCAAACCGTACGGTGGCAAGAAAGACCCCGTGCAGCATCTAAACGCCTACAAAAACTAGATGGACTTCCATGGTGTCTCAGATGCAATCAGGTGCGTGCATTCTTTTTCACTCTGACAGGATCAGCCAAGCATTGGTTTGAAAGATTGAAGAGAAGATCCATCAGCTCTTTCAAGGAATTAGCTCGAGCGTTCCTAGCACAGTTTATGGGAGCCAGAGAACAACGCAAGCCTCACATCAACCTGTTGACAGTCAAACAGCAGCCAGGTGAGAGCTTGCGTGATTACATAACGCGTTTTAATGACGAAGCACTGCAGGTTGAGGGATACAGTGAGGGAGCAACCCTAGTAGCCATCACAGCCGGATTGGAAGACGAAAGACTGCTCAATTCGATAGGTAAGAGCCAACCTCGAACCTATGCAGAACTCGTCTCCCGAGCACAGAAGTATATGAGCACAGAGGAATTACTGAAATCAAAGAGGTCAGGACAAGAGCACAAGAGACATTCTTCAGTCGATCAGGACAGAAAGAAAGATAAGAGACAGCGGACAGACGATAATGGTCGAGGCCGAGCCGACCATGACCATGGCCGAGGCCGAGCACATCCCTTTGGTAAGTTTGAGAAATATACATCAACTGTTGTTCCACAGGAGAAAGTTTTGATGGAGATCCGAAATACAGGACTCCTTAAATTCTCGGGAGGATGA

mRNA sequence

ATGGAGCACACTGCAGAATCAGGGACGAGATCGAAGGGAAAGAAGACTGACAGCATGACCAGCAAGATCAGGGGGCTCAAACCTACTGATCGTACAATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGACGTGACTACCTAGTTTCTACCCCAAGCTACGGTCATACTAAGACCGACCTGAGGAATCTGATCGAGGGGAAACGCAGAAGTGCCAAAACTGTCGAATCCAAGGCCAGAGCTGTTGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAAGGCTAGGTTGGTCGAGGCCGAGGCCAAGAAGAACAACCTCCCTTTGAAGACTGAGCTTCTGAACGCACTAAAGGAGCTCGGAAATCCACAGAGAGACCTGCAGGAGTCAAAGGACCTTGGAGACCCAGACTTGGAAGAACTAGTCGACCAAGTCGACCCGCCCTTCATAGAAGAAGTCATGAAAGCGCCGAGGTGCCCCAAAAGTTCAAGATGCAATCAGGTGCGTGCATTCTTTTTCACTCTGACAGGATCAGCCAAGCATTGGTTTGAAAGATTGAAGAGAAGATCCATCAGCTCTTTCAAGGAATTAGCTCGAGCGTTCCTAGCACAGTTTATGGGAGCCAGAGAACAACGCAAGCCTCACATCAACCTGTTGACAGTCAAACAGCAGCCAGGTGAGAGCTTGCGTGATTACATAACGCGTTTTAATGACGAAGCACTGCAGGTTGAGGGATACAGTGAGGGAGCAACCCTAGTAGCCATCACAGCCGGATTGGAAGACGAAAGACTGCTCAATTCGATAGGTAAGAGCCAACCTCGAACCTATGCAGAACTCGTCTCCCGAGCACAGAAGTATATGAGCACAGAGGAATTACTGAAATCAAAGAGGTCAGGACAAGAGCACAAGAGACATTCTTCAGTCGATCAGGACAGAAAGAAAGATAAGAGACAGCGGACAGACGATAATGGTCGAGGCCGAGCCGACCATGACCATGGCCGAGGCCGAGCACATCCCTTTGGTAAGTTTGAGAAATATACATCAACTGTTGTTCCACAGGAGAAAGTTTTGATGGAGATCCGAAATACAGGACTCCTTAAATTCTCGGGAGGATGA

Coding sequence (CDS)

ATGGAGCACACTGCAGAATCAGGGACGAGATCGAAGGGAAAGAAGACTGACAGCATGACCAGCAAGATCAGGGGGCTCAAACCTACTGATCGTACAATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGACGTGACTACCTAGTTTCTACCCCAAGCTACGGTCATACTAAGACCGACCTGAGGAATCTGATCGAGGGGAAACGCAGAAGTGCCAAAACTGTCGAATCCAAGGCCAGAGCTGTTGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAAGGCTAGGTTGGTCGAGGCCGAGGCCAAGAAGAACAACCTCCCTTTGAAGACTGAGCTTCTGAACGCACTAAAGGAGCTCGGAAATCCACAGAGAGACCTGCAGGAGTCAAAGGACCTTGGAGACCCAGACTTGGAAGAACTAGTCGACCAAGTCGACCCGCCCTTCATAGAAGAAGTCATGAAAGCGCCGAGGTGCCCCAAAAGTTCAAGATGCAATCAGGTGCGTGCATTCTTTTTCACTCTGACAGGATCAGCCAAGCATTGGTTTGAAAGATTGAAGAGAAGATCCATCAGCTCTTTCAAGGAATTAGCTCGAGCGTTCCTAGCACAGTTTATGGGAGCCAGAGAACAACGCAAGCCTCACATCAACCTGTTGACAGTCAAACAGCAGCCAGGTGAGAGCTTGCGTGATTACATAACGCGTTTTAATGACGAAGCACTGCAGGTTGAGGGATACAGTGAGGGAGCAACCCTAGTAGCCATCACAGCCGGATTGGAAGACGAAAGACTGCTCAATTCGATAGGTAAGAGCCAACCTCGAACCTATGCAGAACTCGTCTCCCGAGCACAGAAGTATATGAGCACAGAGGAATTACTGAAATCAAAGAGGTCAGGACAAGAGCACAAGAGACATTCTTCAGTCGATCAGGACAGAAAGAAAGATAAGAGACAGCGGACAGACGATAATGGTCGAGGCCGAGCCGACCATGACCATGGCCGAGGCCGAGCACATCCCTTTGGTAAGTTTGAGAAATATACATCAACTGTTGTTCCACAGGAGAAAGTTTTGATGGAGATCCGAAATACAGGACTCCTTAAATTCTCGGGAGGATGA

Protein sequence

MEHTAESGTRSKGKKTDSMTSKIRGLKPTDRTILRSPESSTLKGRDYLVSTPSYGHTKTDLRNLIEGKRRSAKTVESKARAVEAEARAAEAEAKARLVEAEAKKNNLPLKTELLNALKELGNPQRDLQESKDLGDPDLEELVDQVDPPFIEEVMKAPRCPKSSRCNQVRAFFFTLTGSAKHWFERLKRRSISSFKELARAFLAQFMGAREQRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAELVSRAQKYMSTEELLKSKRSGQEHKRHSSVDQDRKKDKRQRTDDNGRGRADHDHGRGRAHPFGKFEKYTSTVVPQEKVLMEIRNTGLLKFSGG

Homology

[Close]

BLAST of Lag0017774 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 175.6 bits (444), Expect = 7.7e-40
Identity = 114/263 (43.35%), Postives = 147/263 (55.89%), Query Frame = 0


Query: 137 DLEELVDQVDPPFIEEVMKAPRCPK------------------------------SSRCN 196
           DLEEL+DQ D PF EE+M+    PK                               S   
Sbjct: 168 DLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAV 227

Query: 197 QVRAFFFTLTGSAKHWFERLKRRSISSFKELARAFLAQFMGAREQRKPHINLLTVKQQPG 256
           + R F  TL GSA+ WF +LKR SISSFK LARAF+ QF+G R + +P   LLT+KQ+  
Sbjct: 228 RCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTT 287

Query: 257 ESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAELVSRAQKY 316
           ESLRDY+ RFN+E LQVEG ++  +L+A  +G+ DE L  S GK  P T++E +SRAQ+Y
Sbjct: 288 ESLRDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRY 347

Query: 317 MSTEELLKSKRSGQEHKRHSSVDQDRKKDKRQRTDDNGRG-RADHDHGRGRAHPFGKFEK 369
           MS  E   SKR           D  R   KR+R+ D  +G R +      +  P  KFEK
Sbjct: 348 MSAGEFFYSKR---------EPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEK 407

[Close]

BLAST of Lag0017774 vs. NCBI nr
Match: XP_022158344.1 (uncharacterized protein LOC111024851 [Momordica charantia])

HSP 1 Score: 155.6 bits (392), Expect = 8.3e-34
Identity = 92/203 (45.32%), Postives = 130/203 (64.04%), Query Frame = 0


Query: 150 IEEVMKAPRCPKSSRCNQVRAFFFTLTGSAKHWFERLKRRSISSFKELARAFLAQFMGAR 209
           I ++ +A RC         R F FTLTGSA++WF +LKR SISSFKELA AF+ QF+G R
Sbjct: 36  IYDIREAIRC---------RVFSFTLTGSARNWFRQLKRNSISSFKELAEAFVTQFVGGR 95

Query: 210 EQRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIG 269
            + KP   LLT+KQ+  ESL++Y+ RFN+E LQVEG ++   L+A  +G++DERL+ S G
Sbjct: 96  VKSKPVTYLLTIKQKATESLKEYVARFNEEKLQVEGLTDAVALIAFVSGVKDERLVFSFG 155

Query: 270 KSQPRTYAELVSRAQKYMSTEELLKSKRSGQEHKRHSSVDQDRKKDKRQRTDDNGRGRAD 329
           K  P T+ E +SRAQKYMS  EL+   R  +  + + S  ++R+ +KR R+      R+D
Sbjct: 156 KRTPGTFMEALSRAQKYMSAGELIHLSRDLERERANYSTKRERRGEKRHRSSWE---RSD 215

Query: 330 HDHGR-GRAHPFGKFEKYTSTVV 352
             HGR  +  P  KFEK   +++
Sbjct: 216 SGHGRLVQRDPQLKFEKSRMSII 226

[Close]

BLAST of Lag0017774 vs. NCBI nr
Match: XP_022147761.1 (uncharacterized protein LOC111016619 [Momordica charantia])

HSP 1 Score: 155.6 bits (392), Expect = 8.3e-34
Identity = 93/198 (46.97%), Postives = 125/198 (63.13%), Query Frame = 0


Query: 169 RAFFFTLTGSAKHWFERLKRRSISSFKELARAFLAQFMGAREQRKPHINLLTVKQQPGES 228
           R F FTLTGS + WF++LKR+SISSFKELARAF+ QF G   + +P   LLT+KQ+  ES
Sbjct: 46  RVFSFTLTGSTRIWFQQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATES 105

Query: 229 LRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAELVSRAQKYMS 288
           L+DY+ RFN E LQVEG ++   L+   +G++DE+L+ S GK    T++E  SRAQ YMS
Sbjct: 106 LKDYVARFNKEKLQVEGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMS 165

Query: 289 TEELLKSKRSGQEHKRHSSVDQDRKKDKRQ----RTDDNGRGRADHDHGRGRAHPFGKFE 348
             EL+ SKR  +      +  + R  +KR        D+G+GR        +  P  KFE
Sbjct: 166 VGELIHSKRDPKGKYADYNTKRKRPGEKRHGLRWERSDSGQGRL------VQRDPQRKFE 225

Query: 349 KYTSTVVPQEKVLMEIRN 363
           KYT T VP E+VLMEI++
Sbjct: 226 KYTPTTVPLEQVLMEIKH 237

[Close]

BLAST of Lag0017774 vs. NCBI nr
Match: XP_022159109.1 (uncharacterized protein LOC111025548 [Momordica charantia])

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-28
Identity = 101/266 (37.97%), Postives = 135/266 (50.75%), Query Frame = 0


Query: 104 KNNLPLKTELLNALKELGNPQ----RDLQESKDLGDPDLEELVDQVDPPFIEEVMKAPRC 163
           +N+ P+    LN  K +  P+    R  Q+ K     DLEEL+ Q D PF EE+M+    
Sbjct: 42  RNSEPIS---LNKGKPIDRPESSEKRHNQKEKGF---DLEELLGQADSPFTEEIMREKVP 101

Query: 164 PK------------------------------SSRCNQVRAFFFTLTGSAKHWFERLKRR 223
           PK                               S   + R F  TL GSA+ WF +LKR 
Sbjct: 102 PKFKLPTVKPFDGMTEPVDHLDAYREWMDIYGVSDAIRCRVFSTTLNGSARIWFRQLKRG 161

Query: 224 SISSFKELARAFLAQFMGAREQRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEG 283
           SISSFK LARAF+ QF+G R + +P   LLT+KQ+  ESL DY+ RFN+E LQ+EG ++ 
Sbjct: 162 SISSFKSLARAFMTQFVGGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQLEGLTDA 221

Query: 284 ATLVAITAGLEDERLLNSIGKSQPRTYAELVSRAQKYMSTEELLKSKRSGQEHKRHSSVD 336
            +L+A  +G+ DE L  S  K  P T++E +SRAQ+YMS  E   SKR           D
Sbjct: 222 VSLLAFMSGVRDEHLSFSFEKRTPSTFSEALSRAQRYMSASEFCYSKR---------EPD 281

[Close]

BLAST of Lag0017774 vs. NCBI nr
Match: XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])

HSP 1 Score: 137.5 bits (345), Expect = 2.3e-28
Identity = 85/184 (46.20%), Postives = 113/184 (61.41%), Query Frame = 0


Query: 186 LKRRSISSFKELARAFLAQFMGAREQRKPHINLLTVKQQPGESLRDYITRFNDEALQVEG 245
           +KR SISSFK LARAF+ QF+G R + +P   LLT+KQ+  ESL DY+ RFN E LQ+E 
Sbjct: 31  IKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNKEKLQIES 90

Query: 246 YSEGATLVAITAGLEDERLLNSIGKSQPRTYAELVSRAQKYMSTEELLKSKRSGQEHKRH 305
            ++  +L+A  +G+ DE L  S GK  P T++E +SRAQ+YMS  E   SKR        
Sbjct: 91  LTDVVSLLAFMSGVRDEHLSFSFGKKTPSTFSETLSRAQRYMSAGEFFYSKR-------- 150

Query: 306 SSVDQDRKKDKRQRTDDNGRG-RADHDHGRGRAHPFGKFEKYTSTVVPQEKVLMEIRNTG 365
              D  R   KR+R+ D  +G R +      +  P  KFEKYT T VP E+VLMEI++  
Sbjct: 151 -EPDGKRTDQKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKDQR 205

Query: 366 LLKF 369
           LLK+
Sbjct: 211 LLKW 205

[Close]

BLAST of Lag0017774 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.8e-40
Identity = 114/263 (43.35%), Postives = 147/263 (55.89%), Query Frame = 0


Query: 137 DLEELVDQVDPPFIEEVMKAPRCPK------------------------------SSRCN 196
           DLEEL+DQ D PF EE+M+    PK                               S   
Sbjct: 168 DLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAV 227

Query: 197 QVRAFFFTLTGSAKHWFERLKRRSISSFKELARAFLAQFMGAREQRKPHINLLTVKQQPG 256
           + R F  TL GSA+ WF +LKR SISSFK LARAF+ QF+G R + +P   LLT+KQ+  
Sbjct: 228 RCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTT 287

Query: 257 ESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAELVSRAQKY 316
           ESLRDY+ RFN+E LQVEG ++  +L+A  +G+ DE L  S GK  P T++E +SRAQ+Y
Sbjct: 288 ESLRDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRY 347

Query: 317 MSTEELLKSKRSGQEHKRHSSVDQDRKKDKRQRTDDNGRG-RADHDHGRGRAHPFGKFEK 369
           MS  E   SKR           D  R   KR+R+ D  +G R +      +  P  KFEK
Sbjct: 348 MSAGEFFYSKR---------EPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEK 407

[Close]

BLAST of Lag0017774 vs. ExPASy TrEMBL
Match: A0A6J1DZ49 (uncharacterized protein LOC111024851 OS=Momordica charantia OX=3673 GN=LOC111024851 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.0e-34
Identity = 92/203 (45.32%), Postives = 130/203 (64.04%), Query Frame = 0


Query: 150 IEEVMKAPRCPKSSRCNQVRAFFFTLTGSAKHWFERLKRRSISSFKELARAFLAQFMGAR 209
           I ++ +A RC         R F FTLTGSA++WF +LKR SISSFKELA AF+ QF+G R
Sbjct: 36  IYDIREAIRC---------RVFSFTLTGSARNWFRQLKRNSISSFKELAEAFVTQFVGGR 95

Query: 210 EQRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIG 269
            + KP   LLT+KQ+  ESL++Y+ RFN+E LQVEG ++   L+A  +G++DERL+ S G
Sbjct: 96  VKSKPVTYLLTIKQKATESLKEYVARFNEEKLQVEGLTDAVALIAFVSGVKDERLVFSFG 155

Query: 270 KSQPRTYAELVSRAQKYMSTEELLKSKRSGQEHKRHSSVDQDRKKDKRQRTDDNGRGRAD 329
           K  P T+ E +SRAQKYMS  EL+   R  +  + + S  ++R+ +KR R+      R+D
Sbjct: 156 KRTPGTFMEALSRAQKYMSAGELIHLSRDLERERANYSTKRERRGEKRHRSSWE---RSD 215

Query: 330 HDHGR-GRAHPFGKFEKYTSTVV 352
             HGR  +  P  KFEK   +++
Sbjct: 216 SGHGRLVQRDPQLKFEKSRMSII 226

[Close]

BLAST of Lag0017774 vs. ExPASy TrEMBL
Match: A0A6J1D3B7 (uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016619 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.0e-34
Identity = 93/198 (46.97%), Postives = 125/198 (63.13%), Query Frame = 0


Query: 169 RAFFFTLTGSAKHWFERLKRRSISSFKELARAFLAQFMGAREQRKPHINLLTVKQQPGES 228
           R F FTLTGS + WF++LKR+SISSFKELARAF+ QF G   + +P   LLT+KQ+  ES
Sbjct: 46  RVFSFTLTGSTRIWFQQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATES 105

Query: 229 LRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAELVSRAQKYMS 288
           L+DY+ RFN E LQVEG ++   L+   +G++DE+L+ S GK    T++E  SRAQ YMS
Sbjct: 106 LKDYVARFNKEKLQVEGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMS 165

Query: 289 TEELLKSKRSGQEHKRHSSVDQDRKKDKRQ----RTDDNGRGRADHDHGRGRAHPFGKFE 348
             EL+ SKR  +      +  + R  +KR        D+G+GR        +  P  KFE
Sbjct: 166 VGELIHSKRDPKGKYADYNTKRKRPGEKRHGLRWERSDSGQGRL------VQRDPQRKFE 225

Query: 349 KYTSTVVPQEKVLMEIRN 363
           KYT T VP E+VLMEI++
Sbjct: 226 KYTPTTVPLEQVLMEIKH 237

[Close]

BLAST of Lag0017774 vs. ExPASy TrEMBL
Match: A0A6J1E1E7 (uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025548 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.6e-29
Identity = 101/266 (37.97%), Postives = 135/266 (50.75%), Query Frame = 0


Query: 104 KNNLPLKTELLNALKELGNPQ----RDLQESKDLGDPDLEELVDQVDPPFIEEVMKAPRC 163
           +N+ P+    LN  K +  P+    R  Q+ K     DLEEL+ Q D PF EE+M+    
Sbjct: 42  RNSEPIS---LNKGKPIDRPESSEKRHNQKEKGF---DLEELLGQADSPFTEEIMREKVP 101

Query: 164 PK------------------------------SSRCNQVRAFFFTLTGSAKHWFERLKRR 223
           PK                               S   + R F  TL GSA+ WF +LKR 
Sbjct: 102 PKFKLPTVKPFDGMTEPVDHLDAYREWMDIYGVSDAIRCRVFSTTLNGSARIWFRQLKRG 161

Query: 224 SISSFKELARAFLAQFMGAREQRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEG 283
           SISSFK LARAF+ QF+G R + +P   LLT+KQ+  ESL DY+ RFN+E LQ+EG ++ 
Sbjct: 162 SISSFKSLARAFMTQFVGGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQLEGLTDA 221

Query: 284 ATLVAITAGLEDERLLNSIGKSQPRTYAELVSRAQKYMSTEELLKSKRSGQEHKRHSSVD 336
            +L+A  +G+ DE L  S  K  P T++E +SRAQ+YMS  E   SKR           D
Sbjct: 222 VSLLAFMSGVRDEHLSFSFEKRTPSTFSEALSRAQRYMSASEFCYSKR---------EPD 281

[Close]

BLAST of Lag0017774 vs. ExPASy TrEMBL
Match: A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-28
Identity = 85/184 (46.20%), Postives = 113/184 (61.41%), Query Frame = 0


Query: 186 LKRRSISSFKELARAFLAQFMGAREQRKPHINLLTVKQQPGESLRDYITRFNDEALQVEG 245
           +KR SISSFK LARAF+ QF+G R + +P   LLT+KQ+  ESL DY+ RFN E LQ+E 
Sbjct: 31  IKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNKEKLQIES 90

Query: 246 YSEGATLVAITAGLEDERLLNSIGKSQPRTYAELVSRAQKYMSTEELLKSKRSGQEHKRH 305
            ++  +L+A  +G+ DE L  S GK  P T++E +SRAQ+YMS  E   SKR        
Sbjct: 91  LTDVVSLLAFMSGVRDEHLSFSFGKKTPSTFSETLSRAQRYMSAGEFFYSKR-------- 150

Query: 306 SSVDQDRKKDKRQRTDDNGRG-RADHDHGRGRAHPFGKFEKYTSTVVPQEKVLMEIRNTG 365
              D  R   KR+R+ D  +G R +      +  P  KFEKYT T VP E+VLMEI++  
Sbjct: 151 -EPDGKRTDQKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKDQR 205

Query: 366 LLKF 369
           LLK+
Sbjct: 211 LLKW 205

The following BLAST results are available for this feature:

BLAST of Lag0017774 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	7.7e-40	43.35	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022158344.1	8.3e-34	45.32	uncharacterized protein LOC111024851 [Momordica charantia]	[more]
XP_022147761.1	8.3e-34	46.97	uncharacterized protein LOC111016619 [Momordica charantia]	[more]
XP_022159109.1	1.4e-28	37.97	uncharacterized protein LOC111025548 [Momordica charantia]	[more]
XP_022159368.1	2.3e-28	46.20	uncharacterized protein LOC111025785 [Momordica charantia]	[more]

BLAST of Lag0017774 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0017774 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	3.8e-40	43.35	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DZ49	4.0e-34	45.32	uncharacterized protein LOC111024851 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1D3B7	4.0e-34	46.97	uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1E1E7	6.6e-29	37.97	uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DYL6	1.1e-28	46.20	uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Lag0017774 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 72..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..346
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR33223	FAMILY NOT NAMED	coord: 167..325
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 171..260 e-value: 2.0E-15 score: 56.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017774.1	Lag0017774.1	mRNA