
Lag0017734 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATCTGGATCCAAGAAGGAGGATAAATGGATTGGGGTTACGTACGAGAAATTGCCAGATTTTTGCTATGGTTGTGGGTGGCTGGGTCACATCCTGAAAGAATATGAGATGCCATCAGAGTCAAGTGAGGTTGAGCTCCCCTATAGTCCTTGGCTTCGTGAACCTCCAAAGATTAGAGCCAAAGATGATTCTTATTTGGGGAGGAATATGCAGGGACGAGGAAGAGGGAGAGGGTGGAACCCGCACAGTGATCGGTGGAGGAACGACGATCCTGAGGGTGAGGAAGAGGGGATGGATGCAATTCTGGTGGTTCCAAGGGAACCAACACCGGCGGCGTATGTACCTACGACAGCTCAGGCGACAGTTTCAGACCAGACGGAATTGATGGACGGAACGGAGGCTCCAACGGTGGAAAATCCAAACTTGGTAACCAATTCGAGGAAGGAAAAACCTACCATGGATGGGGGCGGGAATCACGAAAATTGA ATGAAATCTGGATCCAAGAAGGAGGATAAATGGATTGGGGTTACGTACGAGAAATTGCCAGATTTTTGCTATGGTTGTGGGTGGCTGGGTCACATCCTGAAAGAATATGAGATGCCATCAGAGTCAAGTGAGGTTGAGCTCCCCTATAGTCCTTGGCTTCGTGAACCTCCAAAGATTAGAGCCAAAGATGATTCTTATTTGGGGAGGAATATGCAGGGACGAGGAAGAGGGAGAGGGTGGAACCCGCACAGTGATCGGTGGAGGAACGACGATCCTGAGGGTGAGGAAGAGGGGATGGATGCAATTCTGGTGGTTCCAAGGGAACCAACACCGGCGGCGTATGTACCTACGACAGCTCAGGCGACAGTTTCAGACCAGACGGAATTGATGGACGGAACGGAGGCTCCAACGGTGGAAAATCCAAACTTGGTAACCAATTCGAGGAAGGAAAAACCTACCATGGATGGGGGCGGGAATCACGAAAATTGA ATGAAATCTGGATCCAAGAAGGAGGATAAATGGATTGGGGTTACGTACGAGAAATTGCCAGATTTTTGCTATGGTTGTGGGTGGCTGGGTCACATCCTGAAAGAATATGAGATGCCATCAGAGTCAAGTGAGGTTGAGCTCCCCTATAGTCCTTGGCTTCGTGAACCTCCAAAGATTAGAGCCAAAGATGATTCTTATTTGGGGAGGAATATGCAGGGACGAGGAAGAGGGAGAGGGTGGAACCCGCACAGTGATCGGTGGAGGAACGACGATCCTGAGGGTGAGGAAGAGGGGATGGATGCAATTCTGGTGGTTCCAAGGGAACCAACACCGGCGGCGTATGTACCTACGACAGCTCAGGCGACAGTTTCAGACCAGACGGAATTGATGGACGGAACGGAGGCTCCAACGGTGGAAAATCCAAACTTGGTAACCAATTCGAGGAAGGAAAAACCTACCATGGATGGGGGCGGGAATCACGAAAATTGA MKSGSKKEDKWIGVTYEKLPDFCYGCGWLGHILKEYEMPSESSEVELPYSPWLREPPKIRAKDDSYLGRNMQGRGRGRGWNPHSDRWRNDDPEGEEEGMDAILVVPREPTPAAYVPTTAQATVSDQTELMDGTEAPTVENPNLVTNSRKEKPTMDGGGNHEN Homology
BLAST of Lag0017734 vs. NCBI nr
Match: KAA0046998.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK04784.1 reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 60.1 bits (144), Expect = 2.1e-05 Identity = 32/87 (36.78%), Postives = 45/87 (51.72%), Query Frame = 0
BLAST of Lag0017734 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia]) HSP 1 Score: 58.9 bits (141), Expect = 4.6e-05 Identity = 49/142 (34.51%), Postives = 61/142 (42.96%), Query Frame = 0
BLAST of Lag0017734 vs. NCBI nr
Match: KAF4362718.1 (hypothetical protein G4B88_018336 [Cannabis sativa]) HSP 1 Score: 57.0 bits (136), Expect = 1.8e-04 Identity = 25/63 (39.68%), Postives = 33/63 (52.38%), Query Frame = 0
BLAST of Lag0017734 vs. NCBI nr
Match: TVU49578.1 (hypothetical protein EJB05_00892, partial [Eragrostis curvula]) HSP 1 Score: 57.0 bits (136), Expect = 1.8e-04 Identity = 30/71 (42.25%), Postives = 37/71 (52.11%), Query Frame = 0
BLAST of Lag0017734 vs. NCBI nr
Match: KAF4349140.1 (hypothetical protein F8388_015837 [Cannabis sativa] >KAF4394914.1 hypothetical protein G4B88_002791 [Cannabis sativa]) HSP 1 Score: 57.0 bits (136), Expect = 1.8e-04 Identity = 23/65 (35.38%), Postives = 35/65 (53.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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