Lag0017721 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017721
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr5: 7723879 .. 7725368 (+)
RNA-Seq Expression	Lag0017721
Synteny	Lag0017721

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGGATTTTCATCGATAGGAAATCGTTTTCTCTATGGAAGAGCGGATGCGGAAGGAAGGTAATAATAGAAGAGAGAAAAGGTAAGAGAGTGGGGAGAATGGAGCTCGAGTTAGGTGCTTCTAATTGGGTCCTTGACTGCCTAGAGGCTGTGGCGAAATCTGGGAACCCCCGTGGCTTCTGGAGAAGGAGGAGATTGGACTCTGCTGTGTTACTCTTCCAAGTTTTAGAAAATGAAAGACGAAGGTTTGGGCTTTTGTCTTTGGAATTTTTTAGAAGAAGAAGGTCGGTGTTATATATTCCAGAAGGTTTTAAAGGGAAGGGATGGAGTCGGTTAGCAGGGGAATTATCATCGGTGTTATCCGGATACAGTGATTCAGGGAAGCTGATAACGAGGGATTCCCATAATGTCGTCCAAAGGAAAGATTCAGTCCTTACTCTAGAAAAGAAGAAGGATGGGAAGCAAAAACAATATGAAGAGGGAGATGAGAAAATACTAGATGAGGAGTTCGACTTCGCTTTTGAGTGTTCGTCGGCTGTCATCATCGAGAGATTCAGTAATAAAACACCCTGGTTTTCCATCAAGGATGCCATTCAGAAGGTTTATGCCGAAGGATGGATATTCAAGCCGTTTTGTGTGAATCTTGCAGTGGGTCTATGCGAAAACAAGGCAGCTATCAAGAAATTGTTATCGGAGGTCACGATCAGAGAAACCCCAGAATACTCCATCCATGAGTGGAGCTTCAAAAAGGTGGCGGAGGGTCGACGACAAGCCTTCTCTGGGGGGTGGGTCACAGCCCTTGATATTCCGCCATTTCTTTGCTCTAAAAGTTTGATTTCTGCAGTAGCGAGCATGTGTGGAGGAGTCAAAGCTAACGACGAGATAGAAGGAGACGAGGTTTCGATTAAAGAAGTTCGTTTTGAGGCAAATGGAAACTCGGACGGCTTTATTCCGGTGGTCAGCTACCTTCGCCATGAGGGATGTTTTTTCCCGATTAGGTTGGTCGTCGATCAGCAGCTGGAAATTGAGAGGTTGAAGATTGATGGAGATGGGTCTGAAAAAGCTGAGAAAGTCGTCCTTCACCTGCCAAAGGAAGCAGTTGTAGGGGGTCAGAGGATTCAGAGGAATAGGGATCACGTGAGGATAATGGGGAAAGGGCCTAAGGTTATGAAAATAACTGCTGATGGGAAGCACAAGTGTAAAAATGGGCCGGTGGGCCTAAAGGAGACAAGCCCAATTAGAATCCTTCACAGGGATCCGTCAAGTTCAGATTTGGAGGCGGTGCAGGCAATAAGGTTGGGCCTTCGGGCCTGAAGGCAGTTAATCCTATCAGCGTTACTCAAAGTTATCAGCCCAGCAAAGATAAGGAATCAGACCAAGGCCAATCGTCGCGAGTTGGCATTCCAGCGGCGCAGGTTTGCAAGGATCGGGCTGATCCGGATTCTTTAACGGCCAGACGAATACAGTCGAAGATGAAAAACAGCTAG

mRNA sequence

ATGGGGAGGATTTTCATCGATAGGAAATCGTTTTCTCTATGGAAGAGCGGATGCGGAAGGAAGGTAATAATAGAAGAGAGAAAAGGTAAGAGAGTGGGGAGAATGGAGCTCGAGTTAGGTGCTTCTAATTGGGTCCTTGACTGCCTAGAGGCTGTGGCGAAATCTGGGAACCCCCGTGGCTTCTGGAGAAGGAGGAGATTGGACTCTGCTGTGTTACTCTTCCAAGTTTTAGAAAATGAAAGACGAAGGTTTGGGCTTTTGTCTTTGGAATTTTTTAGAAGAAGAAGGTCGGTGTTATATATTCCAGAAGGTTTTAAAGGGAAGGGATGGAGTCGGTTAGCAGGGGAATTATCATCGGTGTTATCCGGATACAGTGATTCAGGGAAGCTGATAACGAGGGATTCCCATAATGTCGTCCAAAGGAAAGATTCAGTCCTTACTCTAGAAAAGAAGAAGGATGGGAAGCAAAAACAATATGAAGAGGGAGATGAGAAAATACTAGATGAGGAGTTCGACTTCGCTTTTGAGTGTTCGTCGGCTGTCATCATCGAGAGATTCAGTAATAAAACACCCTGGTTTTCCATCAAGGATGCCATTCAGAAGGTTTATGCCGAAGGATGGATATTCAAGCCGTTTTGTGTGAATCTTGCAGTGGGTCTATGCGAAAACAAGGCAGCTATCAAGAAATTGTTATCGGAGGTCACGATCAGAGAAACCCCAGAATACTCCATCCATGAGTGGAGCTTCAAAAAGGTGGCGGAGGGTCGACGACAAGCCTTCTCTGGGGGGTGGGTCACAGCCCTTGATATTCCGCCATTTCTTTGCTCTAAAAGTTTGATTTCTGCAGTAGCGAGCATGTGTGGAGGAGTCAAAGCTAACGACGAGATAGAAGGAGACGAGGTTTCGATTAAAGAAGTTCGTTTTGAGGCAAATGGAAACTCGGACGGCTTTATTCCGGTGGTCAGCTACCTTCGCCATGAGGGATGTTTTTTCCCGATTAGGTTGGTCGTCGATCAGCAGCTGGAAATTGAGAGGTTGAAGATTGATGGAGATGGGTCTGAAAAAGCTGAGAAAGTCGTCCTTCACCTGCCAAAGGAAGCAGTTGTAGGGGGTCAGAGGATTCAGAGGAATAGGGATCACGTGAGGATAATGGGGAAAGGGCCTAAGGGATCCGTCAAGTTCAGATTTGGAGGCGGTGCAGGCAATAAGGTTGGGCCTTCGGGCCTGAAGGCAGTTAATCCTATCAGCGTTACTCAAAGTTATCAGCCCAGCAAAGATAAGGAATCAGACCAAGGCCAATCGTCGCGAGTTGGCATTCCAGCGGCGCAGGTTTGCAAGGATCGGGCTGATCCGGATTCTTTAACGGCCAGACGAATACAGTCGAAGATGAAAAACAGCTAG

Coding sequence (CDS)

ATGGGGAGGATTTTCATCGATAGGAAATCGTTTTCTCTATGGAAGAGCGGATGCGGAAGGAAGGTAATAATAGAAGAGAGAAAAGGTAAGAGAGTGGGGAGAATGGAGCTCGAGTTAGGTGCTTCTAATTGGGTCCTTGACTGCCTAGAGGCTGTGGCGAAATCTGGGAACCCCCGTGGCTTCTGGAGAAGGAGGAGATTGGACTCTGCTGTGTTACTCTTCCAAGTTTTAGAAAATGAAAGACGAAGGTTTGGGCTTTTGTCTTTGGAATTTTTTAGAAGAAGAAGGTCGGTGTTATATATTCCAGAAGGTTTTAAAGGGAAGGGATGGAGTCGGTTAGCAGGGGAATTATCATCGGTGTTATCCGGATACAGTGATTCAGGGAAGCTGATAACGAGGGATTCCCATAATGTCGTCCAAAGGAAAGATTCAGTCCTTACTCTAGAAAAGAAGAAGGATGGGAAGCAAAAACAATATGAAGAGGGAGATGAGAAAATACTAGATGAGGAGTTCGACTTCGCTTTTGAGTGTTCGTCGGCTGTCATCATCGAGAGATTCAGTAATAAAACACCCTGGTTTTCCATCAAGGATGCCATTCAGAAGGTTTATGCCGAAGGATGGATATTCAAGCCGTTTTGTGTGAATCTTGCAGTGGGTCTATGCGAAAACAAGGCAGCTATCAAGAAATTGTTATCGGAGGTCACGATCAGAGAAACCCCAGAATACTCCATCCATGAGTGGAGCTTCAAAAAGGTGGCGGAGGGTCGACGACAAGCCTTCTCTGGGGGGTGGGTCACAGCCCTTGATATTCCGCCATTTCTTTGCTCTAAAAGTTTGATTTCTGCAGTAGCGAGCATGTGTGGAGGAGTCAAAGCTAACGACGAGATAGAAGGAGACGAGGTTTCGATTAAAGAAGTTCGTTTTGAGGCAAATGGAAACTCGGACGGCTTTATTCCGGTGGTCAGCTACCTTCGCCATGAGGGATGTTTTTTCCCGATTAGGTTGGTCGTCGATCAGCAGCTGGAAATTGAGAGGTTGAAGATTGATGGAGATGGGTCTGAAAAAGCTGAGAAAGTCGTCCTTCACCTGCCAAAGGAAGCAGTTGTAGGGGGTCAGAGGATTCAGAGGAATAGGGATCACGTGAGGATAATGGGGAAAGGGCCTAAGGGATCCGTCAAGTTCAGATTTGGAGGCGGTGCAGGCAATAAGGTTGGGCCTTCGGGCCTGAAGGCAGTTAATCCTATCAGCGTTACTCAAAGTTATCAGCCCAGCAAAGATAAGGAATCAGACCAAGGCCAATCGTCGCGAGTTGGCATTCCAGCGGCGCAGGTTTGCAAGGATCGGGCTGATCCGGATTCTTTAACGGCCAGACGAATACAGTCGAAGATGAAAAACAGCTAG

Protein sequence

MGRIFIDRKSFSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGWSRLAGELSSVLSGYSDSGKLITRDSHNVVQRKDSVLTLEKKKDGKQKQYEEGDEKILDEEFDFAFECSSAVIIERFSNKTPWFSIKDAIQKVYAEGWIFKPFCVNLAVGLCENKAAIKKLLSEVTIRETPEYSIHEWSFKKVAEGRRQAFSGGWVTALDIPPFLCSKSLISAVASMCGGVKANDEIEGDEVSIKEVRFEANGNSDGFIPVVSYLRHEGCFFPIRLVVDQQLEIERLKIDGDGSEKAEKVVLHLPKEAVVGGQRIQRNRDHVRIMGKGPKGSVKFRFGGGAGNKVGPSGLKAVNPISVTQSYQPSKDKESDQGQSSRVGIPAAQVCKDRADPDSLTARRIQSKMKNS

Homology

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BLAST of Lag0017721 vs. NCBI nr
Match: TYK14183.1 (hypothetical protein E5676_scaffold8046G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 154.1 bits (388), Expect = 3.0e-33
Identity = 109/352 (30.97%), Postives = 172/352 (48.86%), Query Frame = 0


Query: 1   MGRIFIDRKSFSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRG 60
           MG++ IDRK F +      RK+ IEER G+  G++EL+ G S WV DCL   A + N   
Sbjct: 1   MGKLKIDRKEFLVGFMVKARKIYIEERNGRIFGKLELDFGTSAWVRDCLVGAAGANNSMV 60

Query: 61  FWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGWSRLAGELSSV 120
           FW +RRL+ A++ FQVLENE+ RF +LSLE F+ R++ ++IPEG +G GW  LAGE+S++
Sbjct: 61  FW-QRRLEFAIIFFQVLENEKGRFAILSLESFKERKTRIFIPEGSRGSGWRSLAGEISAL 120

Query: 121 LSGYSDSGKLITRDSHNVVQRKDSVLTLEKKKDGKQKQYEEGDEKILDEEFDFAFECSSA 180
           L  +S +    T       + +++   L K    +++  E G      ++ +FAFE  S 
Sbjct: 121 LP-WSGTINQKTGSMSQPAKNREAFKGLGKMV--RRRTDESG------KDVEFAFEWKST 180

Query: 181 VIIERFSNKTPWFSIKDAIQKVYAEGWIFKPFCVNLAVGLCENKAAIKKLLSEVTIRETP 240
           VII++    + W ++K  +++       FK FC NLAVG+  + +  K  L    +   P
Sbjct: 181 VIIKKLRASSDWGALKQLLEQPPVICCNFKNFCANLAVGIGGSDSEAKNSLG---LGHCP 240

Query: 241 EYSIHEWSFKKVAEGRRQAFSGGWVTALDIPPFLCSKSLISAVASMCGGVKANDEIEGDE 300
           E  +                         +P               CGG    ++     
Sbjct: 241 ELMV-------------------------VP---------------CGGPDEEEDPFFKS 299

Query: 301 VSIKEVRFEANGNSDGFIPVVSYLRHEGCFFPIRLVV--DQQLEIERLKIDG 351
             ++EV F+A GN DGF+     + ++   F  R  +   Q+ E++ L  DG
Sbjct: 301 NWMREVCFKALGNEDGFVLACCIVNYQEFSFSSRFCIGWSQEGEVQLLSKDG 299

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BLAST of Lag0017721 vs. NCBI nr
Match: TQD89700.1 (hypothetical protein C1H46_024694 [Malus baccata])

HSP 1 Score: 100.9 bits (250), Expect = 3.0e-17
Identity = 99/392 (25.26%), Postives = 171/392 (43.62%), Query Frame = 0


Query: 6   IDRKSFSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRR 65
           I+ KSF       G ++ + ER   R  ++  +LG + W+++ L+AV  +G    F+R+ 
Sbjct: 21  IEDKSF-------GERIRVTERTRTRGYQISFDLGCAAWIIEQLKAVITTGG-LNFFRKY 80

Query: 66  RLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGWSRLAGELSSVLSGYS 125
           +  +     +  +N    F +LS          +++P+GFKG GW  L   +  +L G  
Sbjct: 81  KGHNYQFWVEGFQNRNGEFLVLSKTEKDGFVRHIFVPKGFKGIGWRNLEELMYEILQGGK 140

Query: 126 DSG-KLITRDSHNVVQRKD--SVLTLEKKKD----GKQKQYEEGDEKILDE---EFDF-- 185
            +G KL   +      R+D     T    +D    G+Q   EE + +  +E   EF +  
Sbjct: 141 KTGNKLRKMNRVGTEPRRDMSGAGTQGSYRDAVTGGRQTTKEEYNWRAREELWKEFTWNQ 200

Query: 186 ------AFECSSAVIIERFSNKTPWFSIKDAIQKVYAEGWIFKPFCVNLAVGLCENKAAI 245
                 ++   S V+ ER      W  ++ +++ +        PF  N A+ +C+N+   
Sbjct: 201 RKCSKESYSWGSVVVCERKVVHQSWREVEASLRNLLGTDIRLSPFQCNKALFVCQNEEEA 260

Query: 246 KK--LLSEVTIRETPEYSIHEWSFKKVAEGRRQAFS-GGWVTALDIPPFLCSKSLISAVA 305
           KK  LL  + ++E PE  +  W ++ +   +R A S GGWV    +PP L +K     + 
Sbjct: 261 KKIALLGAIGMKEYPEVKLAGW-WESLNTNQRMAVSYGGWVALEGLPPHLWTKKFFQDIG 320

Query: 306 SMCGGVKANDEIEGDEVSIKEVRFEANGNSDGFIPVVSYLRHEGCFFPIRLVVDQQLEIE 365
             CGG+   D+       + E + +   N  GFIP V  +      F +R  + Q    +
Sbjct: 321 EACGGLADIDQTTAGFGFLLEAKIKLKTNLTGFIPEVVEVADGDLVFRVR--IRQLSPAK 380

Query: 366 RLKIDGDGSEKAEKVVLHLPKEAVVGGQRIQR 377
           R  I  +   + E  V  L KE     Q++QR
Sbjct: 381 RPMIPAEDRGRPEAFVGSLEKE-----QQLQR 396

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BLAST of Lag0017721 vs. NCBI nr
Match: KAA0054521.1 (transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 3.6e-10
Identity = 61/173 (35.26%), Postives = 77/173 (44.51%), Query Frame = 0


Query: 16  SGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQ 75
           S CGRK+ IEER G+R  ++ELELG S WV DCL A A+  NP  FWRRR L++ VL   
Sbjct: 135 SECGRKICIEERNGERSRKLELELGTSAWVRDCLVAAAELSNPLVFWRRRWLETRVL--- 194

Query: 76  VLENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGWSRLAGELSSVLSGYSDS-GKLITRD 135
                                    IP+G  G G   LA E S  L G + S G L +  
Sbjct: 195 -------------------------IPDGKNGSGRRPLAAEAS--LEGRAGSEGSLKSGK 254

Query: 136 SHNVVQRKDSVLTLEKKKDGKQKQYEEGDEKILDEEFDFAFECSSAVIIERFS 188
             + V + D             K   EG  +    EFD   +C + VII+  S
Sbjct: 255 ELDAVVKADC-----------SKVESEGSPEDKKWEFDLRSDCEATVIIKMTS 266

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BLAST of Lag0017721 vs. NCBI nr
Match: KAE8648463.1 (hypothetical protein Csa_023678, partial [Cucumis sativus])

HSP 1 Score: 63.5 bits (153), Expect = 5.4e-06
Identity = 34/96 (35.42%), Postives = 45/96 (46.88%), Query Frame = 0


Query: 236 IRETPEYSIHEWSFKKVAEGRRQAFSGGWVTALDIPPFLCSKSLISAVASMCGGVKANDE 295
           I     + +  W F+ +   R+Q F GG V ALD+PPF  +K    ++ S CGG      
Sbjct: 64  IASKSRFFVSTWDFRVIEGQRKQEFRGGSVAALDVPPFFENKGDNPSLVSWCGGRAVKMC 123

Query: 296 IEGDEVSIKEVRFEANGNSDGFIPVVSYLRHEGCFF 332
           I      +KEV F A    DGFI V   + H   FF
Sbjct: 124 IHWSPTGLKEVSFRAEVKEDGFILVGCIVNHWDFFF 159

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BLAST of Lag0017721 vs. NCBI nr
Match: CAN75028.1 (hypothetical protein VITISV_026823 [Vitis vinifera])

HSP 1 Score: 61.6 bits (148), Expect = 2.0e-05
Identity = 40/144 (27.78%), Postives = 69/144 (47.92%), Query Frame = 0


Query: 3   RIFIDRKSFSLWKSGC--GRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRG 62
           RI +++K F +   G   G  V + ER    V  +  ++   +W+++ L+   +    RG
Sbjct: 16  RIIVEKKYFQVEFEGLNGGTWVSVTERSRGFVVSIGFDMEEMDWLMEHLKKAVEVEASRG 75

Query: 63  FWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGWSRLAGELSSV 122
           F R+ R  +  LL ++  N R RF  ++    +R+  VL +PEG KGKGW  L   + SV
Sbjct: 76  FVRKIRGKTKTLLMEICFNNRGRFMKITEFVTKRKPLVLIVPEGVKGKGWEDLKKAILSV 135

Query: 123 LSGYSDSGKLITRDSHNVVQRKDS 145
              Y   G      + ++   +D+
Sbjct: 136 QEYYERDGGASKEKNGDIRMNRDT 159

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BLAST of Lag0017721 vs. ExPASy TrEMBL
Match: A0A5D3CQQ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold8046G00070 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-33
Identity = 109/352 (30.97%), Postives = 172/352 (48.86%), Query Frame = 0


Query: 1   MGRIFIDRKSFSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRG 60
           MG++ IDRK F +      RK+ IEER G+  G++EL+ G S WV DCL   A + N   
Sbjct: 1   MGKLKIDRKEFLVGFMVKARKIYIEERNGRIFGKLELDFGTSAWVRDCLVGAAGANNSMV 60

Query: 61  FWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGWSRLAGELSSV 120
           FW +RRL+ A++ FQVLENE+ RF +LSLE F+ R++ ++IPEG +G GW  LAGE+S++
Sbjct: 61  FW-QRRLEFAIIFFQVLENEKGRFAILSLESFKERKTRIFIPEGSRGSGWRSLAGEISAL 120

Query: 121 LSGYSDSGKLITRDSHNVVQRKDSVLTLEKKKDGKQKQYEEGDEKILDEEFDFAFECSSA 180
           L  +S +    T       + +++   L K    +++  E G      ++ +FAFE  S 
Sbjct: 121 LP-WSGTINQKTGSMSQPAKNREAFKGLGKMV--RRRTDESG------KDVEFAFEWKST 180

Query: 181 VIIERFSNKTPWFSIKDAIQKVYAEGWIFKPFCVNLAVGLCENKAAIKKLLSEVTIRETP 240
           VII++    + W ++K  +++       FK FC NLAVG+  + +  K  L    +   P
Sbjct: 181 VIIKKLRASSDWGALKQLLEQPPVICCNFKNFCANLAVGIGGSDSEAKNSLG---LGHCP 240

Query: 241 EYSIHEWSFKKVAEGRRQAFSGGWVTALDIPPFLCSKSLISAVASMCGGVKANDEIEGDE 300
           E  +                         +P               CGG    ++     
Sbjct: 241 ELMV-------------------------VP---------------CGGPDEEEDPFFKS 299

Query: 301 VSIKEVRFEANGNSDGFIPVVSYLRHEGCFFPIRLVV--DQQLEIERLKIDG 351
             ++EV F+A GN DGF+     + ++   F  R  +   Q+ E++ L  DG
Sbjct: 301 NWMREVCFKALGNEDGFVLACCIVNYQEFSFSSRFCIGWSQEGEVQLLSKDG 299

[Close]

BLAST of Lag0017721 vs. ExPASy TrEMBL
Match: A0A0A0LY03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G673520 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-16
Identity = 54/145 (37.24%), Postives = 85/145 (58.62%), Query Frame = 0


Query: 17  GCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQV 76
           G  RK+ IEER G++ G+++L+LG   WV D L A A +    G W+R++LD  ++ FQV
Sbjct: 3   GSNRKIYIEERNGRKCGKLDLDLGTLTWVEDRLNAAADASFSMGSWQRKKLDFGIIFFQV 62

Query: 77  LENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGWSRLAGEL-----SSVLSGYSDSGKLI 136
           LEN  RRF ++SL+ F+ R++ ++I EG +  GW  LA E+       +L+     G + 
Sbjct: 63  LENIGRRFTIISLDSFKGRKARVFISEGSRESGWRSLAREILNMGRREILALLLGPG-IA 122

Query: 137 TRDSHNVVQRKDSVLTLEKKKDGKQ 157
           T+ S N +Q      +  K+K+G Q
Sbjct: 123 TQKSSNEIQHPKG--STRKRKEGSQ 144

[Close]

BLAST of Lag0017721 vs. ExPASy TrEMBL
Match: A0A0A0KB99 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G136570 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.4e-13
Identity = 44/89 (49.44%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 35  MELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRR 94
           MEL+ G S  V DCL   A + NPR FW RR L  A++ FQVLEN R RF +LSLE F+ 
Sbjct: 1   MELDFGTSALVRDCLTNAAVANNPRVFWGRRGLKFAIIFFQVLENARGRFVILSLESFKG 60

Query: 95  RRSVLYIPEGFKGKGWSRLAGELSSVLSG 124
           +++ ++I +G KGKG    A E+S +L G
Sbjct: 61  KKTRIFISKGSKGKGRKSFAEEISVLLLG 89

[Close]

BLAST of Lag0017721 vs. ExPASy TrEMBL
Match: A0A0A0KGZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G169320 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.5e-11
Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = 0


Query: 8   RKSFSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRL 67
           ++S+    + CGRK+ IEE  G+R G++ELELGAS WV+DCL A A+  NP GFW RR L
Sbjct: 120 KQSYLKENAQCGRKICIEEGNGERFGKLELELGASAWVIDCLVAAAELSNPLGFWWRRWL 179

Query: 68  DSAVLLFQVLENERR 83
           +   + FQ     RR
Sbjct: 180 ERTNIFFQASLEGRR 194

[Close]

BLAST of Lag0017721 vs. ExPASy TrEMBL
Match: A0A5A7ULV4 (Transcription elongation factor B polypeptide 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G003030 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.7e-10
Identity = 61/173 (35.26%), Postives = 77/173 (44.51%), Query Frame = 0


Query: 16  SGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQ 75
           S CGRK+ IEER G+R  ++ELELG S WV DCL A A+  NP  FWRRR L++ VL   
Sbjct: 135 SECGRKICIEERNGERSRKLELELGTSAWVRDCLVAAAELSNPLVFWRRRWLETRVL--- 194

Query: 76  VLENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGWSRLAGELSSVLSGYSDS-GKLITRD 135
                                    IP+G  G G   LA E S  L G + S G L +  
Sbjct: 195 -------------------------IPDGKNGSGRRPLAAEAS--LEGRAGSEGSLKSGK 254

Query: 136 SHNVVQRKDSVLTLEKKKDGKQKQYEEGDEKILDEEFDFAFECSSAVIIERFS 188
             + V + D             K   EG  +    EFD   +C + VII+  S
Sbjct: 255 ELDAVVKADC-----------SKVESEGSPEDKKWEFDLRSDCEATVIIKMTS 266

[Close]

BLAST of Lag0017721 vs. TAIR 10
Match: AT2G32080.1 (purin-rich alpha 1 )

HSP 1 Score: 44.7 bits (104), Expect = 2.4e-04
Identity = 30/111 (27.03%), Postives = 47/111 (42.34%), Query Frame = 0


Query: 11  FSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSA 70
           F L ++  GR + I E+       + +     +W LD       S     F +  +LDS 
Sbjct: 45  FDLKENPRGRYLKISEKTSATRSTIIVPSSGISWFLDLFNYYVNSEEHELFSKELQLDSK 104

Query: 71  VLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFK-GKGWSRLAGELSSV 121
           V  F + EN R RF  +S     R RS + +P G    +GW+     L+ +
Sbjct: 105 VFYFDIGENRRGRFLKVSEASVSRNRSTIIVPAGSSPDEGWAAFRNILAEI 155

[Close]

BLAST of Lag0017721 vs. TAIR 10
Match: AT2G32080.2 (purin-rich alpha 1 )

HSP 1 Score: 44.7 bits (104), Expect = 2.4e-04
Identity = 30/111 (27.03%), Postives = 47/111 (42.34%), Query Frame = 0


Query: 11  FSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSA 70
           F L ++  GR + I E+       + +     +W LD       S     F +  +LDS 
Sbjct: 45  FDLKENPRGRYLKISEKTSATRSTIIVPSSGISWFLDLFNYYVNSEEHELFSKELQLDSK 104

Query: 71  VLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFK-GKGWSRLAGELSSV 121
           V  F + EN R RF  +S     R RS + +P G    +GW+     L+ +
Sbjct: 105 VFYFDIGENRRGRFLKVSEASVSRNRSTIIVPAGSSPDEGWAAFRNILAEI 155

The following BLAST results are available for this feature:

BLAST of Lag0017721 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK14183.1	3.0e-33	30.97	hypothetical protein E5676_scaffold8046G00070 [Cucumis melo var. makuwa]	[more]
TQD89700.1	3.0e-17	25.26	hypothetical protein C1H46_024694 [Malus baccata]	[more]
KAA0054521.1	3.6e-10	35.26	transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. ma...	[more]
KAE8648463.1	5.4e-06	35.42	hypothetical protein Csa_023678, partial [Cucumis sativus]	[more]
CAN75028.1	2.0e-05	27.78	hypothetical protein VITISV_026823 [Vitis vinifera]	[more]

BLAST of Lag0017721 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0017721 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CQQ0	1.5e-33	30.97	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LY03	2.1e-16	37.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G673520 PE=4 SV=1	[more]
A0A0A0KB99	6.4e-13	49.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G136570 PE=4 SV=1	[more]
A0A0A0KGZ5	3.5e-11	49.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G169320 PE=4 SV=1	[more]
A0A5A7ULV4	1.7e-10	35.26	Transcription elongation factor B polypeptide 3 isoform X2 OS=Cucumis melo var. ...	[more]

BLAST of Lag0017721 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32080.1	2.4e-04	27.03	purin-rich alpha 1	[more]
AT2G32080.2	2.4e-04	27.03	purin-rich alpha 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 418..466
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 418..438

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017721.1	Lag0017721.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0090304	nucleic acid metabolic process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003676	nucleic acid binding