Lag0017705 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0017705
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRibonuclease H
Locationchr5: 7299378 .. 7301046 (+)
RNA-Seq ExpressionLag0017705
SyntenyLag0017705
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGGGGAGGTGCCGCACAAATTCAAGGTACCAAACTTCCCGCAGTATGATGGGAAGAAGGATCCGAAACAGCACCTAGATGCATACCAAACTTGGATGGACTTTCATGGGGCGAACGAAGCGACAAGGTGCCGAGCTTTTGCCCTAACGCTCACAGGTTTAGCAAGGCAGTGGTTTGGCAAGGTCCAGCGAAGGTCAATAGGCTCGTTCAGGAGCTGGCCCGAGCGTTCGTTACCCAATTCCTAGGAGCTCGTAGTCGACAGAAGCGCCAAATAAACTTGCTGACAGTAAAGCAGGGGCCCCGAGAAAGCCTGAGGGATTATATTAACTGATTTAGCAACGAAGTTTTGCAGGTGGAGGGTTACGATGATGGAGTAGCTTTGACTGCTGTGATTTCAGGTTTGCAGGATGAAAGGCTACTCAATTCAATTGGAGAGAGCCAACCACGAACGTATGTGGAGTTTATGACCCAAGCACCAAGATACATAAGCGCGGAGGAGCTGTTGAGATCCAAACAGGAAGAAAGAGAGAGTCGGGGGATGTCAGACCGGCGTCAGGAAGACAGGGGAAAGAGGCACCAGGCGAAGGGAGAGGCGGGAGCCGACCAGAGCACTCCTCGGCCAATGGCCGAGGCCGACCAGATTCCAAGGAGCTGCAAGGCCGTGCGGAGCCTAAGGCCAGGTTCGACAGGTATACGCCACTAACAACTTCGCTTGAACAGGTCTTGGCCGCAATACAGGACACGAATCTGTTGAAACGCCCAGAAAAGTTGAGATCAGATCCCGACAGAAGAAACAGGAACAAATATTGCATGTTCCACGGAGATCACGGCCATACAACCAGAGAATGCATCCAGTTACGAGATGAGATAGAAACCCTAATCCGAGAGGGTTACCTCAAGGAATTCGTGGGGAATGACAAAAGCAAGAGGCCACCGCCAGCGGACCAAGGCAAGGGTGGTGTCAACCCACCGCTCGAGATTCGAACCATTTTAGGAGGACCCTCAGGAGGAGAGTCGAGTAGGAAGCGAAAAGTTGCAGTTCGAGAGGCACAACAAGAGCCCGGAGGGCAAGGTATGTACTCACTCCTACTTGATGAAAACTCACCAAAGTTAGAGTTTACAGAGAATGAGGTTGCGGGAACACGTCATCCGCACAACGACGGGCTGGTAATCGCTTTAACGGTTGCCAACGCGAAGGTCCACCGAATCCTCATTGATGGGGGAAGTTCTGCTGACGTGCTCTTGACTACTGCGTTCGACGCCCTGAAGCTGGGGAGTGATCGCCTGAAGCCGAGCCTCACACCACTGGTAGGTTTTGGCGGAGAAAAAGTAAGCCTGAGAGGGAGTGTCGAACTGCCGGTGACATTTGGAGAAGGATTGTAGACAGTAACGAGGATGATCAACTTCTTAGTGGTAGACTGCGTCCCAGCATATAATGCCATCTTGGGACGACCCACCCTACATGGACTCAAAGCTGTTGCTTCAACCTACCACCAAGTCCTGAAGTTCCCAACTGAAGAAGGTGTAGGAGCAGAGAGTGTCAAGGAATGCTACTTTATGGCGAGCAGAGAGTGTCAAGGGAATGCTACTTTATGGCACTCAAAACATCGACAGAAAGGTTCAAGCAACGATAGCCTCGGGATATGGCCGAGGCCGAGCATTTGA

mRNA sequence

ATGAGAGGGGAGGTGCCGCACAAATTCAAGGTACCAAACTTCCCGCAGTATGATGGGAAGAAGGATCCGAAACAGCACCTAGATGCATACCAAACTTGGATGGACTTTCATGGGGCGAACGAAGCGACAAGGTGCCGAGCTTTTGCCCTAACGCTCACAGGTTTAGCAAGGCAGTGGTTTGGCAAGGTGGAGGGTTACGATGATGGAGTAGCTTTGACTGCTGTGATTTCAGGAAGAAAGAGAGAGTCGGGGGATGTCAGACCGGCGTCAGGAAGACAGGGGAAAGAGGCACCAGGCGAAGGGAGAGGCGGGAGCCGACCAGAGCACTCCTCGGCCAATGGCCGAGGCCGACCAGATTCCAAGGAGCTGCAAGGCCGTGCGGAGCCTAAGGCCAGGTTCGACAGGTATACGCCACTAACAACTTCGCTTGAACAGGTCTTGGCCGCAATACAGGACACGAATCTGTTGAAACGCCCAGAAAAGTTGAGATCAGATCCCGACAGAAGAAACAGGAACAAATATTGCATGTTCCACGGAGATCACGGCCATACAACCAGAGAATGCATCCAGTTACGAGATGAGATAGAAACCCTAATCCGAGAGGGTTACCTCAAGGAATTCGTGGGGAATGACAAAAGCAAGAGGCCACCGCCAGCGGACCAAGGCAAGGGTGGTGTCAACCCACCGCTCGAGATTCGAACCATTTTAGGAGGACCCTCAGGAGGAGAGTCGAGTAGGAAGCGAAAAGTTGCAGTTCGAGAGGCACAACAAGAGCCCGGAGGGCAAGGTATGTACTCACTCCTACTTGATGAAAACTCACCAAAGTTAGAGTTTACAGAGAATGAGGTTGCGGGAACACGTCATCCGCACAACGACGGGCTGGTAATCGCTTTAACGGTTGCCAACGCGAAGGTCCACCGAATCCTCATTGATGGGGGAAGTTCTGCTGACGTGCTCTTGACTACTGCGTTCGACGCCCTGAAGCTGGGGAGTGATCGCCTGAAGCCGAGCCTCACACCACTGACAGTAACGAGGATGATCAACTTCTTAGTGGTAGACTGCGTCCCAGCATATAATGCCATCTTGGGACGACCCACCCTACATGGACTCAAAGCTGTTGCTTCAACCTACCACCAAGTCCTGAAGTTCCCAACTGAAGAAGGTGTAGGAGCAGAGAGTGTCAAGGAATGCTACTTTATGGCGAGCAGAGAGTGTCAAGGGAATGCTACTTTATGGCACTCAAAACATCGACAGAAAGGTTCAAGCAACGATAGCCTCGGGATATGGCCGAGGCCGAGCATTTGA

Coding sequence (CDS)

ATGAGAGGGGAGGTGCCGCACAAATTCAAGGTACCAAACTTCCCGCAGTATGATGGGAAGAAGGATCCGAAACAGCACCTAGATGCATACCAAACTTGGATGGACTTTCATGGGGCGAACGAAGCGACAAGGTGCCGAGCTTTTGCCCTAACGCTCACAGGTTTAGCAAGGCAGTGGTTTGGCAAGGTGGAGGGTTACGATGATGGAGTAGCTTTGACTGCTGTGATTTCAGGAAGAAAGAGAGAGTCGGGGGATGTCAGACCGGCGTCAGGAAGACAGGGGAAAGAGGCACCAGGCGAAGGGAGAGGCGGGAGCCGACCAGAGCACTCCTCGGCCAATGGCCGAGGCCGACCAGATTCCAAGGAGCTGCAAGGCCGTGCGGAGCCTAAGGCCAGGTTCGACAGGTATACGCCACTAACAACTTCGCTTGAACAGGTCTTGGCCGCAATACAGGACACGAATCTGTTGAAACGCCCAGAAAAGTTGAGATCAGATCCCGACAGAAGAAACAGGAACAAATATTGCATGTTCCACGGAGATCACGGCCATACAACCAGAGAATGCATCCAGTTACGAGATGAGATAGAAACCCTAATCCGAGAGGGTTACCTCAAGGAATTCGTGGGGAATGACAAAAGCAAGAGGCCACCGCCAGCGGACCAAGGCAAGGGTGGTGTCAACCCACCGCTCGAGATTCGAACCATTTTAGGAGGACCCTCAGGAGGAGAGTCGAGTAGGAAGCGAAAAGTTGCAGTTCGAGAGGCACAACAAGAGCCCGGAGGGCAAGGTATGTACTCACTCCTACTTGATGAAAACTCACCAAAGTTAGAGTTTACAGAGAATGAGGTTGCGGGAACACGTCATCCGCACAACGACGGGCTGGTAATCGCTTTAACGGTTGCCAACGCGAAGGTCCACCGAATCCTCATTGATGGGGGAAGTTCTGCTGACGTGCTCTTGACTACTGCGTTCGACGCCCTGAAGCTGGGGAGTGATCGCCTGAAGCCGAGCCTCACACCACTGACAGTAACGAGGATGATCAACTTCTTAGTGGTAGACTGCGTCCCAGCATATAATGCCATCTTGGGACGACCCACCCTACATGGACTCAAAGCTGTTGCTTCAACCTACCACCAAGTCCTGAAGTTCCCAACTGAAGAAGGTGTAGGAGCAGAGAGTGTCAAGGAATGCTACTTTATGGCGAGCAGAGAGTGTCAAGGGAATGCTACTTTATGGCACTCAAAACATCGACAGAAAGGTTCAAGCAACGATAGCCTCGGGATATGGCCGAGGCCGAGCATTTGA

Protein sequence

MRGEVPHKFKVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVEGYDDGVALTAVISGRKRESGDVRPASGRQGKEAPGEGRGGSRPEHSSANGRGRPDSKELQGRAEPKARFDRYTPLTTSLEQVLAAIQDTNLLKRPEKLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDKSKRPPPADQGKGGVNPPLEIRTILGGPSGGESSRKRKVAVREAQQEPGGQGMYSLLLDENSPKLEFTENEVAGTRHPHNDGLVIALTVANAKVHRILIDGGSSADVLLTTAFDALKLGSDRLKPSLTPLTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAESVKECYFMASRECQGNATLWHSKHRQKGSSNDSLGIWPRPSI
Homology
BLAST of Lag0017705 vs. NCBI nr
Match: XP_024041095.1 (uncharacterized protein LOC112098853 [Citrus clementina])

HSP 1 Score: 263.8 bits (673), Expect = 2.5e-66
Identity = 182/547 (33.27%), Postives = 256/547 (46.80%), Query Frame = 0

Query: 1   MRGEVPHKFKVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWF 60
           M  + P +F +P    YDG++DP +HL+ Y+T M+  GA++A  CRAF LTL G AR+WF
Sbjct: 182 MVAKYPPRFHLPQMEPYDGQRDPTEHLELYRTLMEVQGASQAILCRAFPLTLVGAARRWF 241

Query: 61  ----------------------------GK-----------------------------V 120
                                       GK                             V
Sbjct: 242 RRLQPHSISSFGDLSREFTSHFRSARQRGKPVTYLLTVKQQEGETLRDYIRRYNNEITQV 301

Query: 121 EGYDDGVALTAVISG----------RKRESGDVRPASGRQGKEAPGEGRGGSRPEHSSAN 180
           +GYDDG+AL+ ++ G           KR          R  K A  E R  +R +    +
Sbjct: 302 DGYDDGIALSGIMEGLRMGKLWWSVSKRPPTSYSEMLARAEKYANAEERFKNRNQEKGES 361

Query: 181 GRG-------------RPDSKELQGRAEPKAR-------------FDRYTPLTTSLEQVL 240
            +G             RPD    + +  P  R             F  +T L T  EQ+L
Sbjct: 362 TKGKKKKDDQRERRVVRPDQSLRRNQFRPGERSEVRDTRPRLASQFTNFTELNTPREQIL 421

Query: 241 AAIQDTNLLKRPEKLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEF 300
             +++  L + P  ++++P RRN NKYC FH DHGH T EC +L+++IE+L+R+G L+E+
Sbjct: 422 MQVRNPTLFRTPPPMKTNPSRRNPNKYCHFHKDHGHDTSECFELKEQIESLVRQGQLQEY 481

Query: 301 VGND----KSKRPPPADQGKG-----GVNPPLEIRTILGGPSGGESSRKRKVAVREAQQE 360
           V N     KS++P  + + KG           ++  I GGP+ G+S + RK   R+A+ E
Sbjct: 482 VRNPEDRVKSEQPESSKKRKGKKKEDSDESMSDVNHIWGGPAAGDSRKSRKNLARQARHE 541

Query: 361 PGGQGMYSLLLDENSP----KLEFTENEVAGTRHPHNDGLVIALTVANAKVHRILIDGGS 412
           P G  +      + S      + F+E++  G  HPH D LV+ L VAN ++HRILID GS
Sbjct: 542 PNGPEVNLTNQSQGSMVRGIPIIFSEDDARGVHHPHCDALVVTLPVANKRLHRILIDNGS 601

BLAST of Lag0017705 vs. NCBI nr
Match: XP_030955724.1 (uncharacterized protein LOC115977839 [Quercus lobata])

HSP 1 Score: 251.9 bits (642), Expect = 9.9e-63
Identity = 169/494 (34.21%), Postives = 233/494 (47.17%), Query Frame = 0

Query: 5   VPHKFKVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGK-- 64
           +P KFK+P+   YDG +DP  H+  ++T M   G  +   CRAF  TL G AR WF K  
Sbjct: 41  LPSKFKLPSLDSYDGTRDPFDHIATFKTTMHLQGVPDEIMCRAFPTTLKGPARVWFSKIP 100

Query: 65  -------------------------------------------------------VEGYD 124
                                                                  V+  D
Sbjct: 101 PSSVSSFEELSKLFVNNFIGGQRHKRSSSSLLTIEQGENESLRSFITRFNREALSVDEVD 160

Query: 125 DGVALTAVISGRK-----RESGDVRPASGRQGKEAPGEGRGGSRPEHSSANGR---GR-P 184
           D + L A  +G        +  +  P +  + K    E        HS    R   GR  
Sbjct: 161 DKLLLAAFHNGINSDLFIHKLYEKEPQTMAELKRKRAERMEAHPVRHSEQAPRPKKGRTE 220

Query: 185 DSKELQGR-AEPKARFDRYTPLTTSLEQVLAAIQDTNLLKRPEKLRSDPDRRNRNKYCMF 244
           D KE  GR   P  R   YTPL   L QVL  I+D   LK PEK++ DP++RN+NKYC F
Sbjct: 221 DRKERDGRKTGPLGRSQNYTPLNAPLNQVLMQIKDDPSLKWPEKMKGDPNKRNKNKYCRF 280

Query: 245 HGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDKSKRPPPADQGKGGVNPPLEIRTILG 304
           H DHGH T EC  L+ +IE LIR+G LK FVG D++         +    P  EIR I+G
Sbjct: 281 HRDHGHDTDECYDLKQQIENLIRQGKLKHFVGRDRTDEKLKGKMEESSRPPLGEIRIIVG 340

Query: 305 GPSGGESSRKRKVAVREAQQ-EPGGQGMYSLLLDENSPKLEFTENEVAGTRHPHNDGLVI 364
           G   G+SS+ +K  ++  Q  +  G+   +  +DE  P + FT+ +     HPH+D +VI
Sbjct: 341 GNPMGQSSKSKKTYLKAVQNVQLSGRPPRTRFMDE--PTISFTDEDAERIHHPHDDAIVI 400

Query: 365 ALTVANAKVHRILIDGGSSADVLLTTAFDALKLGSDRLKPSLTPL--------------- 406
            L +A+    R+L+D GSSAD+L    F  ++LG D+L+P  +PL               
Sbjct: 401 TLLIADYTTRRVLVDNGSSADILYYPTFQQMRLGRDQLRPVCSPLIGFKGMKVQPVGTIT 460

BLAST of Lag0017705 vs. NCBI nr
Match: XP_030930616.1 (uncharacterized protein LOC115956348 [Quercus lobata])

HSP 1 Score: 249.2 bits (635), Expect = 6.4e-62
Identity = 171/511 (33.46%), Postives = 239/511 (46.77%), Query Frame = 0

Query: 5   VPHKFKVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVE 64
           +P KFK+P+   YDG +DP  H+  ++T M   G  +   CRAF  TL GLAR WF K+ 
Sbjct: 148 LPSKFKMPSLDSYDGTRDPFDHIATFKTTMHLQGVPDEIMCRAFPTTLKGLARVWFSKIP 207

Query: 65  --------------------GYDDGVALTAVISGRKRESGDVRPASGRQGKEA------- 124
                               G     + +++++  + E+  +R    R  +EA       
Sbjct: 208 PNSMSSFEELSKLFVNNFIGGQRHKCSSSSLLTIEQGENESLRSFITRFNREALSVDEAD 267

Query: 125 ----------------------PGEGRGGSRPEHSSANGRGRPD---------------- 184
                                   E +  +   HS+ N     D                
Sbjct: 268 DKLLLAAFHNGVSSDLFIHKLYEKEPQSMAELVHSAQNFMNAEDAIIVKKRKRYERVDTN 327

Query: 185 -SKELQGRAEPK------------------ARFDRYTPLTTSLEQVLAAIQDTNLLKRPE 244
            S+ L+    PK                  AR  +YT L   LEQVL  I+D   LK PE
Sbjct: 328 PSRHLEQGPRPKKGRMEDRKDRDIKKPGSSARNQQYTSLNVPLEQVLMQIKDDPSLKWPE 387

Query: 245 KLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDKSKRPPPAD 304
           K+R DP++RNRNKYC FH DHGH T EC  L+ +IE LIR+G LK F+G D         
Sbjct: 388 KMRGDPNKRNRNKYCRFHRDHGHDTDECFDLKQQIENLIRQGKLKNFLGRDNRDEKMKGK 447

Query: 305 QGKGGVNPPLEIRTILGGPSGGESSRKRKVAVREAQQ-EPGGQGMYSLLLDENSPKLEFT 364
             +  + P  EIR I+GG S G+SS+ +K  ++  Q  +  G+   +   DE +  + FT
Sbjct: 448 MEESSLPPLEEIRVIVGGSSTGQSSKSKKAYLKVVQSVQLSGRSPRARTTDEAA--ITFT 507

Query: 365 ENEVAGTRHPHNDGLVIALTVANAKVHRILIDGGSSADVLLTTAFDALKLGSDRLKPSLT 406
           + +     HPH+D LVI L +A+    R+L+D GSS D+L   AF  ++LG DRL+P  +
Sbjct: 508 DEDAERIHHPHDDALVITLMIADYTTRRVLVDNGSSTDILYYPAFQQVRLGRDRLRPVNS 567

BLAST of Lag0017705 vs. NCBI nr
Match: XP_030969633.1 (uncharacterized protein LOC115989899 [Quercus lobata])

HSP 1 Score: 247.3 bits (630), Expect = 2.5e-61
Identity = 162/443 (36.57%), Postives = 229/443 (51.69%), Query Frame = 0

Query: 5   VPHKFKVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGK-- 64
           +P KFK+P+   YDG +DP  H+  ++T M   G  +   CRAF  TL G AR WF K  
Sbjct: 146 LPSKFKLPSLDSYDGTRDPFDHIATFKTTMHLQGVPDEIMCRAFPTTLKGPARVWFSKIP 205

Query: 65  ---VEGYDDGVAL--TAVISGRKRESGDVRPASGRQGKEAPGEGRGGSRPEHSSANGRGR 124
              V  +++   L     I G++ +S      +  QG+      R      +  A     
Sbjct: 206 PSSVSSFEESSKLFVNNFIGGQRHKSSSSSLLTIEQGENE--SLRSFITRFNREALSVDE 265

Query: 125 PDSKELQGRAEPKARFDRY------TPLTTSLEQVLAAIQDTNLLKRPEKLRSDPDRRNR 184
            D K L          D +          T  E VL  I+D   LK PEK++ DP++RN+
Sbjct: 266 VDDKLLLAAFHNGINSDLFIHNLYEKEPQTMAELVLMQIKDDPSLKWPEKMKGDPNKRNK 325

Query: 185 NKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDKSKRPPPADQGKGGV----N 244
           NKYC FH DHGH T EC  L+ +IE LIR+G LK FVG D++      ++ KG +     
Sbjct: 326 NKYCRFHRDHGHDTDECYDLKQQIENLIRQGKLKHFVGRDRTD-----EKLKGKIEESSR 385

Query: 245 PPL-EIRTILGGPSGGESSRKRKVAVREAQQ-EPGGQGMYSLLLDENSPKLEFTENEVAG 304
           PPL EIR I+GG   G+SS+ +K  ++  Q  +  G+   +  +DE  P + FT+ +   
Sbjct: 386 PPLGEIRIIVGGNPMGQSSKSKKTYLKVVQNVQLSGRTPRTRSMDE--PTISFTDEDAER 445

Query: 305 TRHPHNDGLVIALTVANAKVHRILIDGGSSADVLLTTAFDALKLGSDRLKPSLTPL---- 364
             HPH+D +VI L +A+    R+L+D GSSAD+L   AF  ++LG D+L+P  +PL    
Sbjct: 446 IHHPHDDAIVITLLIADYTTRRVLVDNGSSADILYYPAFQQMRLGRDQLRPVCSPLIGFG 505

Query: 365 ---------------------TVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQV 399
                                 +T+ +NFLVVDC  +YNAI+GRPTL+  KA+ STYH  
Sbjct: 506 GMKVQPVGTITLPVVVGSYPQQITKEVNFLVVDCTSSYNAIIGRPTLNSWKAITSTYHLS 565

BLAST of Lag0017705 vs. NCBI nr
Match: XP_030936482.1 (uncharacterized protein LOC115961685 [Quercus lobata])

HSP 1 Score: 246.9 bits (629), Expect = 3.2e-61
Identity = 157/440 (35.68%), Postives = 226/440 (51.36%), Query Frame = 0

Query: 5   VPHKFKVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGK-- 64
           +P KFK+P+   YDG +DP  H+  ++T M   G  +   CRAF  TL G AR WF K  
Sbjct: 146 LPSKFKLPSLDSYDGTRDPFDHIATFKTTMHLQGVPDEIMCRAFPTTLKGPARVWFSKIP 205

Query: 65  ---VEGYDD--GVALTAVISGRKRESGDVRPASGRQGKEAPGEGRGGSRPEHSSANGRGR 124
              V  +++   + +   I G++ +       +  QG+      R      +  A     
Sbjct: 206 PSSVSSFEELSKLFVNNFIGGQRHKRSSSSLLTIEQGENE--SLRSFITRFNREALSVDE 265

Query: 125 PDSKELQGRAEPKARFDRY------TPLTTSLEQVLAAIQDTNLLKRPEKLRSDPDRRNR 184
            D K L          D +          T  E VL  I+D   LK PEK++ DP++RN+
Sbjct: 266 VDDKLLLAAFHNGINSDLFIHKLYEKEPQTMAELVLMQIKDDPSLKWPEKMKGDPNKRNK 325

Query: 185 NKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDKSKRPPPADQGKGGVNPPLE 244
           NKYC FH DHGH T EC  L+ +IE LIR+G LK FVG D++         +    P  E
Sbjct: 326 NKYCRFHRDHGHDTDECYDLKQQIENLIRQGKLKHFVGRDRTDEKLKGKMEESSRPPLGE 385

Query: 245 IRTILGGPSGGESSRKRKVAVREAQQ-EPGGQGMYSLLLDENSPKLEFTENEVAGTRHPH 304
           IR I+GG   G+SS+ +K  ++  Q  +  G+   + L+DE  P + FT+ +     HPH
Sbjct: 386 IRIIVGGNPMGQSSKSKKTYLKAVQNVQLSGRPPRTRLMDE--PTISFTDEDAERIHHPH 445

Query: 305 NDGLVIALTVANAKVHRILIDGGSSADVLLTTAFDALKLGSDRLKPSLTPL--------- 364
           +D +VI L +A+    R+L+D GSSAD+L   AF  ++LG D+L+P  +PL         
Sbjct: 446 DDAIVITLLIADYTTRRVLVDNGSSADILYYPAFQQMRLGRDQLRPVCSPLIGFGGMKVQ 505

Query: 365 ----------------TVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPT 406
                            +T+ +NFLVVDC  +YNAI+GRPTL+  KA+ STYH  +KFPT
Sbjct: 506 PVGTITLPVVVGSYPQQITKEVNFLVVDCTSSYNAIIGRPTLNSWKAITSTYHLSVKFPT 565

BLAST of Lag0017705 vs. ExPASy TrEMBL
Match: A0A2N9FE79 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13364 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.8e-63
Identity = 169/501 (33.73%), Postives = 249/501 (49.70%), Query Frame = 0

Query: 5   VPHKFKVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVE 64
           +P +FKVP    +DG KDP  +L+A++T M      E   CRAF L L G AR WF K+E
Sbjct: 180 LPSRFKVPLLENFDGTKDPFDYLEAFKTIMQLQAVPEEVMCRAFPLGLRGSARVWFNKLE 239

Query: 65  GYDDGVAL--------------------TAVISGRKRESGDVRPASGRQGKEA------- 124
               G  +                    T ++S ++ E   +R    R  +EA       
Sbjct: 240 SESIGSFVQLSRAFIDHFIGSQRRGRPPTHLLSVKQMEGESLRTFVHRFNEEAMKIDRPK 299

Query: 125 --------------------PGEGRGGS---RPEHSSANGRGRPDSKELQGRAEPKARFD 184
                               P + R  +   +PE S        ++ E +    P  +F 
Sbjct: 300 EDVTVTAFMAEDALEAMDDPPPKRRKEAEDRKPEPSKQKVPKFTETPERKRTTAPPVKFS 359

Query: 185 RYTPLTTSLEQVLAAIQDTNLLKRPEKLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDE 244
            +TPL T ++++L  IQD   L+ P K+RSDP+ R +N YC FH DHGH T EC+ L+++
Sbjct: 360 SFTPLNTPIDKLLLQIQDDPSLRWPGKIRSDPNSRPKNLYCRFHRDHGHLTEECVALKEQ 419

Query: 245 IETLIREGYLKEFVGNDKSKRP--PPADQGKGGVN---PPLEIRTILGGP-SGGESSRKR 304
           IETLIR+G L+++V    + RP  PPA + +   N   P  EIRTI+GGP SGG S   R
Sbjct: 420 IETLIRQGKLQKYVSRPTNTRPAKPPAQREQAEHNRPGPVGEIRTIVGGPASGGTSRASR 479

Query: 305 KVAVREAQQEPGGQGMYSLLLDENSPK--------LEFTENEVAGTRHPHNDGLVIALTV 364
           K   R+         ++++++ +  PK        + F+E +  GT  PH+D LVI + +
Sbjct: 480 KAYARQ---------VHNIMVVQRPPKNIRLDDQIISFSEEDARGTHQPHDDALVITINI 539

Query: 365 ANAKVHRILIDGGSSADVLLTTAFDALKLGSDRLKPSLTPL------------------- 412
           A     R+++D GSSAD+L   A+  ++L  D+L+P   PL                   
Sbjct: 540 AGFTTRRVMVDNGSSADILYLPAYQQMRLDKDKLRPMDAPLVGFTGDKVCPVGIVTLPIT 599

BLAST of Lag0017705 vs. ExPASy TrEMBL
Match: A0A2N9EL41 (Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3176 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.1e-62
Identity = 166/483 (34.37%), Postives = 247/483 (51.14%), Query Frame = 0

Query: 5   VPHKFKVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVE 64
           +P +FKVP    +DG KDP  +L+A++T M      E   CRAF L L G AR WF K+E
Sbjct: 165 LPSRFKVPLLENFDGTKDPFDYLEAFKTIMQLQAVPEEVMCRAFPLGLRGSARVWFNKLE 224

Query: 65  GYDDG--VALTA------------------VISGRKRESGDVRPASGRQGKEA------- 124
               G  V L+                   ++S ++ E   +R    R  +EA       
Sbjct: 225 SESIGSFVQLSRAFIDHFIGSQRRGRPPIHLLSVKQMEGESLRTFVHRFNEEAMKIDRPK 284

Query: 125 -------------PGEGRGGS---RPEHSSANGRGRPDSKELQGRAEPKARFDRYTPLTT 184
                        P + R  +   +PE +        ++ E +    P  +F  +TPL T
Sbjct: 285 ENVTDALEAMDDPPPKRRKNTEDRKPEPAKQKVPKFTETPERKRTTAPPVKFSSFTPLNT 344

Query: 185 SLEQVLAAIQDTNLLKRPEKLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIETLIRE 244
            ++++L  IQD   L+ P K+RSDP+ R +N YC FH DHGH T +C+ L++++ETLIR+
Sbjct: 345 PIDKLLLQIQDDPSLRWPGKIRSDPNSRPKNLYCRFHRDHGHLTEDCVALKEQVETLIRQ 404

Query: 245 GYLKEFVGNDKSKRP--PPADQGKGGVN---PPLEIRTILGGP-SGGESSRKRKVAVREA 304
           G L+++V    + RP  PPA + +   N   P  EIRTI+GGP SGG S   RK   R+ 
Sbjct: 405 GKLQKYVSRPANTRPAKPPAQREQTEHNRPGPVGEIRTIIGGPASGGTSRASRKAYARQ- 464

Query: 305 QQEPGGQGMYSLLLDENSPK--------LEFTENEVAGTRHPHNDGLVIALTVANAKVHR 364
                   ++++++ +  PK        + F+E +  GT  PH+D LVI + +A     R
Sbjct: 465 --------VHNIMVVQRPPKNVRLDDQIISFSEEDARGTHQPHDDALVITINIAGFTTRR 524

Query: 365 ILIDGGSSADVLLTTAFDALKLGSDRLKPSLTPL-------------------------T 406
           +++D GSSAD+L    +  ++L  D+L+P   PL                         T
Sbjct: 525 VMVDNGSSADILYLPTYQQMRLDKDKLRPMDAPLVGFTSDKVCPNGIVTLPITVGTHPKT 584

BLAST of Lag0017705 vs. ExPASy TrEMBL
Match: A0A2N9IZ99 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58548 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.8e-62
Identity = 171/504 (33.93%), Postives = 247/504 (49.01%), Query Frame = 0

Query: 5   VPHKFKVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVE 64
           +P +FKVP    +DG KDP  +L+A++T M      E   CRAF L L G AR WF K+E
Sbjct: 178 LPSRFKVPLLENFDGTKDPFDYLEAFKTIMQLQAVPEEVMCRAFPLGLRGSARVWFNKLE 237

Query: 65  GYDDG--VALTAVI---------SGRKRESGDVRPASGRQGKE----------------- 124
               G  V L+             G    S   R A+GR+  E                 
Sbjct: 238 SESIGSFVQLSRAFIDHFIRQPTKGTTANSLAQRQANGRRITEDIWDFLYELCKDPPETM 297

Query: 125 ----------------------APGEGRGGS---RPEHSSANGRGRPDSKELQGRAEPKA 184
                                  P + R  +   +PE S        ++ E +    P  
Sbjct: 298 SELMYEATKHMNAEDALEAMDDPPPKRRKEAEDRKPEPSKQKVPKFTETPERKRTTAPPV 357

Query: 185 RFDRYTPLTTSLEQVLAAIQDTNLLKRPEKLRSDPDRRNRNKYCMFHGDHGHTTRECIQL 244
           +F  +TPL T ++++L  IQD   L+ P K+RSDP+ R +N YC FH DHGH T EC+ L
Sbjct: 358 KFSSFTPLNTPIDKLLLQIQDDPSLRWPGKIRSDPNSRPKNLYCRFHRDHGHLTEECVAL 417

Query: 245 RDEIETLIREGYLKEFVGNDKSKRP--PPADQGKGGVN---PPLEIRTILGGP-SGGESS 304
           +++IETLIR+G L+++V    + RP  PPA + +   N   P  EIRTI+GGP SGG S 
Sbjct: 418 KEQIETLIRQGKLQKYVNRPTNTRPAKPPAQREQAEPNRPGPVGEIRTIVGGPASGGTSR 477

Query: 305 RKRKVAVREAQQEPGGQGMYSLLLDENSPK--------LEFTENEVAGTRHPHNDGLVIA 364
             RK   R+         ++++++ +  PK        + F+E +  GT  PH+D LVI 
Sbjct: 478 ASRKAYARQ---------VHNIMVVQRPPKNIRLDDQIISFSEEDARGTHQPHDDALVIT 537

Query: 365 LTVANAKVHRILIDGGSSADVLLTTAFDALKLGSDRLKPSLTPL---------------- 412
           + +A     R+++D GSSAD+L   A+  ++L  D+L+P   PL                
Sbjct: 538 INIAGFTTRRVMVDNGSSADILYLPAYQQMRLDKDKLRPMDAPLVGFTGDKICPVGIVTL 597

BLAST of Lag0017705 vs. ExPASy TrEMBL
Match: A0A2N9IJR2 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52580 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.4e-62
Identity = 167/501 (33.33%), Postives = 246/501 (49.10%), Query Frame = 0

Query: 5   VPHKFKVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVE 64
           +P +FKVP    +DG KDP  +L+A++T M      E   CRAF L L G AR WF K+E
Sbjct: 178 LPSRFKVPLLENFDGTKDPFDYLEAFKTIMQLQAVPEEVMCRAFPLGLRGSARVWFNKLE 237

Query: 65  GYDDGVAL--------------------TAVISGRKRESGDVRPASGRQGKEA------- 124
               G  +                    T ++S ++ E   +R    R   EA       
Sbjct: 238 SESIGSFVQLSRAFIDHFIGSQRRGRPPTHLLSVKQMEGESLRTFVHRFNGEAMKIDRPK 297

Query: 125 --------------------PGEGR---GGSRPEHSSANGRGRPDSKELQGRAEPKARFD 184
                               P + R      +PE S        ++ E +    P  +F 
Sbjct: 298 EDVTVTAFMAEDALEAMDDPPPKRRKEVEDRKPEPSKQKVPKFTETPERKRTTAPPVKFS 357

Query: 185 RYTPLTTSLEQVLAAIQDTNLLKRPEKLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDE 244
            +TPL T ++++L  IQD   L+ P K+RSDP+ R +N YC FH DHGH T EC+ L+++
Sbjct: 358 SFTPLNTPIDKLLLQIQDDPSLRWPGKIRSDPNSRPKNLYCRFHRDHGHLTEECVALKEQ 417

Query: 245 IETLIREGYLKEFVGNDKSKRP--PPADQGKGGVN---PPLEIRTILGGP-SGGESSRKR 304
           +ETLIR+G L+++V    + RP  PP  + +   N   P  EIRTI+GGP SGG S   R
Sbjct: 418 VETLIRQGKLQKYVNRPTNTRPAKPPVQREQAEPNRPGPVGEIRTIVGGPASGGTSRASR 477

Query: 305 KVAVREAQQEPGGQGMYSLLLDENSPK--------LEFTENEVAGTRHPHNDGLVIALTV 364
           K   R+         ++++++ +  PK        + F+E +  GT  PH+D LVI + +
Sbjct: 478 KAYARQ---------VHNIMVVQRPPKNIRLDDQIISFSEEDARGTHQPHDDALVITINI 537

Query: 365 ANAKVHRILIDGGSSADVLLTTAFDALKLGSDRLKPSLTPL------------------- 412
           A     R+++D GSSAD+L   A+  ++L  D+L+P   PL                   
Sbjct: 538 AGFTTRRVMVDNGSSADILYLPAYQQMRLDKDKLRPMDAPLVGFTGDKICPVGIVTLPIM 597

BLAST of Lag0017705 vs. ExPASy TrEMBL
Match: A0A2N9IQC0 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54437 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.3e-60
Identity = 163/471 (34.61%), Postives = 233/471 (49.47%), Query Frame = 0

Query: 5   VPHKFKVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFG--- 64
           +P KFKVP    +DG KDP  +LD+++T M  HG ++   CR F   L G AR WF    
Sbjct: 169 LPAKFKVPQLETFDGFKDPLDYLDSFRTIMRLHGVSDEIMCRTFPTNLRGSARTWFNQAG 228

Query: 65  ---------------------------KVEGYDDGVALTAVISG---------------- 124
                                      +++  ++ VALTA  +G                
Sbjct: 229 DRLHRHIRPREGESLRSYVQRFNKEAVQIDEPNEYVALTAFNAGLLKGDFLFQLCKDPPK 288

Query: 125 -------------RKRESGDVRPASGRQGKEAPGEGRGGSRPEHSSANGRGRPDSKELQG 184
                           ++   R     + ++ P + R  S    SS     + + K +  
Sbjct: 289 SMSELMYEAQKFINAEDAFQARDEFLSRKRKEPEDRRFDSSRNKSSRQDYPKAERKNISS 348

Query: 185 RAEPKARFDRYTPLTTSLEQVLAAIQDTNLLKRPEKLRSDPDRRNRNKYCMFHGDHGHTT 244
               + R   +TPL  S++QVL  I+D   +K P KLRSDP +R+++ YC FH DHGHTT
Sbjct: 349 SNRREERPSSFTPLNMSIDQVLLQIEDNPDIKWPGKLRSDPTKRSKDLYCRFHRDHGHTT 408

Query: 245 RECIQLRDEIETLIREGYLKEFVGNDKSK-----RPPPADQGKGGVNPPL-----EIRTI 304
            +C  L+ +IE LIR+G L +FV  DK++     RPP  D+ K            EIRTI
Sbjct: 409 EDCFALKQQIEALIRQGKLGKFVRQDKTEVRQEPRPPRQDENKDRQEDRPRDIIGEIRTI 468

Query: 305 LGG-PSGGESSRKRKVAVREAQQEPGGQ-GMYSLLLDENSPKLEFTENEVAGTRHPHNDG 364
           +GG  SGG S   RK   R+A      Q    SL +D+    + F+E++     HPH+D 
Sbjct: 469 VGGLASGGASRSSRKAYARQAHNILVTQRSRKSLKMDDQ--VISFSEDDARNIHHPHDDA 528

Query: 365 LVIALTVANAKVHRILIDGGSSADVLLTTAFDALKLGSDRLKPSLTPLTVTRMINFLVVD 400
           LV+ LT+A     R+L+D GSSAD++   A+  +K+  ++LKP   PL       FLVVD
Sbjct: 529 LVVTLTIAGFLTRRVLVDNGSSADIIYLPAYQQMKVDKEQLKPIDIPL--VGFTEFLVVD 588

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_024041095.12.5e-6633.27uncharacterized protein LOC112098853 [Citrus clementina][more]
XP_030955724.19.9e-6334.21uncharacterized protein LOC115977839 [Quercus lobata][more]
XP_030930616.16.4e-6233.46uncharacterized protein LOC115956348 [Quercus lobata][more]
XP_030969633.12.5e-6136.57uncharacterized protein LOC115989899 [Quercus lobata][more]
XP_030936482.13.2e-6135.68uncharacterized protein LOC115961685 [Quercus lobata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9FE792.8e-6333.73Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13364 PE=4 SV=1[more]
A0A2N9EL411.1e-6234.37Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3176 PE=4 SV=1[more]
A0A2N9IZ991.8e-6233.93Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58548 PE=4 SV=1[more]
A0A2N9IJR22.4e-6233.33Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52580 PE=4 SV=1[more]
A0A2N9IQC01.3e-6034.61Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54437 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 414..434
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..133
NoneNo IPR availablePANTHERPTHR33240:SF7GAG-PRO-LIKE PROTEINcoord: 137..210
NoneNo IPR availablePANTHERPTHR33240OS08G0508500 PROTEINcoord: 137..210
coord: 305..388
NoneNo IPR availablePANTHERPTHR33240:SF7GAG-PRO-LIKE PROTEINcoord: 305..388
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 302..368
e-value: 7.36779E-6
score: 42.3236

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0017705.1Lag0017705.1mRNA