Lag0017691 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017691
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	ATP-dependent DNA helicase
Location	chr5: 6938385 .. 6940302 (-)
RNA-Seq Expression	Lag0017691
Synteny	Lag0017691

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTTTTTATCAAGAGTCGGGTAGGGCTGGTCGTGATCAATTACCCTCTAAAAGTCTGTTATACTATGGAATTGAAGACCGCAGAAGAATGGTTAATTTCTCAACTTGAACTTGCTGTCCTCTCTTCCCTCATTAGGTTGCACTTTTTTTTTTTTTCTTTTTTGCATGATTCATTTATTTATTTGACATTTTCCATTGTTGCAGGAATTTATTCTAAGAAATAGCTCCAGTGTTGATAAGAAGATCCTACCATCTTCAAACTCTCAAGAAAAGTTATCAGAGAAGTCCTTAACTGACTTTACTCAGGTGATTTTCGTCTGCATTTGTAATCTGACAATCATATTGTTTGCCGTTATCTTGATGTCCTGGCACAACTGAATGCAGATGGTTGAGTATTGTGAGGGTTCTCGATGTCGCAGGAAGCAAATTCTGGAGAGTTTCGGAGAACAGGTAGGAGGAAGGTTTATTTGTACAATCACAATGGGTGTTCGTTTTCTTCTCAACACCTGACTACTGTCTCAGAAGCTAATAAATGTAATTGTTGGACTGACTAGGTTCCTGCATCCATATGTAGTAGAACGTGTGATGCCTGCAAACACCCTAACATTGTTGCTGCCTATTTGGAGGAGCTTACTACTTGTGCTGTTAGGCGAAATAATTCATCCTCTAGAATTTTTGTCAGCAGGTGCTTGTCTTAAATATGTTTTAAATTTTAAATTTTATTATTGAAGAGGCTAGTCGTAAATCTTAAAGGCAACTTATTTGTTGAAGTAATATATTATAACTTTCTTAAGTATAACATATTTCTCAATCCATTATAAAAGCATGCTGAAACTTCTGCTTTTGTTGTGATTTATCTATTCTATTGACAAACACTTCTAGAGAGAGAGAGAAATGGAACAGGCAGGACATATGTTTGAGAAGGCAAAGCCATATTTGGGAGTAATTGCACTAAGATTTGCTTCTGCAGGAATGTCTATTATCTCTAACGCAAAGGTAGGACATTGTTGTTGCTCCTTTTGCCTTTGTCTTGGACAGGTACTAATTTTCTCTCGCTCTAAGCTACATTTTGTCTAGCCTTTCATCATCACTAACCCATTTCATTGGCAGAAAAATAAGGCGAAAGATGACTCTTCGAATTTTCGCCAAGATTCGCCAAGATTCTTCTACTGGGTACTAATTTTAAGAATATTTTGTGTTTTTTTTTCGTTCGAATCACTACTTTTTGATATTAGTTCTGATTCTGCTAGCTTATGTAAAAAAAGAGGGGTTCATTTGGGTGTTTATGGTTTTGTTTCTTTTTATACAATATATCAAGTCCGTATTGGTTGTAGTGGGAGATTCATTAACTTTCTTTTTATACGATATATCAAGTCCGTATGGTTTTTCAGGTTGGTATAAGATTGTTATCACAAGAAGGAAGATAAGCTCATAGCATAGATTGATAAGATCAATATTGAAATTGTTTGTTTGTGTAGGTTTATAACCTTTTTTTTTGGGGGGGGGGGGTGAGTTTGAAATTGTTTGTGTTAGTTTGTAAGTTTAGTGTGGGAGGGGGTTGAGAAATACTTGTGTTGTGTTTTGAAATTGTTTATGTGAGTTTATGATTTTAGTTGGATTTAGTGGGAAGTTGATAAATACTTGAGTCATGCTTTGAAATTGTTTGTATGACTTTATCGTTATATTTTGAAATCGCTTGTGTTAGTTTATAAGTTTAGTTGAGTTGAAGGTTGAGAAATACTTTAGTTATGCTTTGAAATTGTTTGTTTGTGTTGGTTTATATCAATCATAGGCTTTACAATACTTAGTTATGCTTTGTGTTGCAGATGATGAAATGGATATTCTCGAAAAAGGAGTTCAAAGAGGAACTTGGGAAAGAGCGTTTTAAGGAGTTGTATACTTATTTTGTTTAG

mRNA sequence

ATGGAAGCTTTTTATCAAGAGTCGGGTAGGGCTGGTCGTGATCAATTACCCTCTAAAAGTCTGTTATACTATGGAATTGAAGACCGCAGAAGAATGGAATTTATTCTAAGAAATAGCTCCAGTGTTGATAAGAAGATCCTACCATCTTCAAACTCTCAAGAAAAGTTATCAGAGAAGTCCTTAACTGACTTTACTCAGATGGTTGAGTATTGTGAGGGTTCTCGATGTCGCAGGAAGCAAATTCTGGAGAGTTTCGGAGAACAGGTTCCTGCATCCATATGTAGTAGAACGTGTGATGCCTGCAAACACCCTAACATTGTTGCTGCCTATTTGGAGGAGCTTACTACTTGTGCTGTTAGGCGAAATAATTCATCCTCTAGAATTTTTGTCAGCAGAGAGAGAGAAATGGAACAGGCAGGACATATGTTTGAGAAGGCAAAGCCATATTTGGGAGTAATTGCACTAAGATTTGCTTCTGCAGGAATGTCTATTATCTCTAACGCAAAGGTAGGACATTGTTGTTGCTCCTTTTGCCTTTGTCTTGGACAGAAAAATAAGGCGAAAGATGACTCTTCGAATTTTCGCCAAGATTCGCCAAGATTCTTCTACTGGATGATGAAATGGATATTCTCGAAAAAGGAGTTCAAAGAGGAACTTGGGAAAGAGCGTTTTAAGGAGTTGTATACTTATTTTGTTTAG

Coding sequence (CDS)

ATGGAAGCTTTTTATCAAGAGTCGGGTAGGGCTGGTCGTGATCAATTACCCTCTAAAAGTCTGTTATACTATGGAATTGAAGACCGCAGAAGAATGGAATTTATTCTAAGAAATAGCTCCAGTGTTGATAAGAAGATCCTACCATCTTCAAACTCTCAAGAAAAGTTATCAGAGAAGTCCTTAACTGACTTTACTCAGATGGTTGAGTATTGTGAGGGTTCTCGATGTCGCAGGAAGCAAATTCTGGAGAGTTTCGGAGAACAGGTTCCTGCATCCATATGTAGTAGAACGTGTGATGCCTGCAAACACCCTAACATTGTTGCTGCCTATTTGGAGGAGCTTACTACTTGTGCTGTTAGGCGAAATAATTCATCCTCTAGAATTTTTGTCAGCAGAGAGAGAGAAATGGAACAGGCAGGACATATGTTTGAGAAGGCAAAGCCATATTTGGGAGTAATTGCACTAAGATTTGCTTCTGCAGGAATGTCTATTATCTCTAACGCAAAGGTAGGACATTGTTGTTGCTCCTTTTGCCTTTGTCTTGGACAGAAAAATAAGGCGAAAGATGACTCTTCGAATTTTCGCCAAGATTCGCCAAGATTCTTCTACTGGATGATGAAATGGATATTCTCGAAAAAGGAGTTCAAAGAGGAACTTGGGAAAGAGCGTTTTAAGGAGTTGTATACTTATTTTGTTTAG

Protein sequence

MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEELTTCAVRRNNSSSRIFVSREREMEQAGHMFEKAKPYLGVIALRFASAGMSIISNAKVGHCCCSFCLCLGQKNKAKDDSSNFRQDSPRFFYWMMKWIFSKKEFKEELGKERFKELYTYFV

Homology

[Close]

BLAST of Lag0017691 vs. NCBI nr
Match: KAA0061460.1 (ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63
Identity = 126/132 (95.45%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFI+RN SS DKKILPSS+SQEK SEKS
Sbjct: 337 MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFIIRNRSSADKKILPSSSSQEKQSEKS 396

Query: 61  LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEELTTCAVR 120
           LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSR+CDACKHPNIVAAYLEELTTCAVR
Sbjct: 397 LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIVAAYLEELTTCAVR 456

Query: 121 RNNSSSRIFVSR 133
           RNNSSSRIFVSR
Sbjct: 457 RNNSSSRIFVSR 468

[Close]

BLAST of Lag0017691 vs. NCBI nr
Match: XP_008459900.1 (PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X2 [Cucumis melo])

HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63
Identity = 126/132 (95.45%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFI+RN SS DKKILPSS+SQEK SEKS
Sbjct: 337 MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFIIRNRSSADKKILPSSSSQEKQSEKS 396

Query: 61  LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEELTTCAVR 120
           LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSR+CDACKHPNIVAAYLEELTTCAVR
Sbjct: 397 LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIVAAYLEELTTCAVR 456

Query: 121 RNNSSSRIFVSR 133
           RNNSSSRIFVSR
Sbjct: 457 RNNSSSRIFVSR 468

[Close]

BLAST of Lag0017691 vs. NCBI nr
Match: XP_008459885.1 (PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis melo])

HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63
Identity = 126/132 (95.45%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFI+RN SS DKKILPSS+SQEK SEKS
Sbjct: 337 MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFIIRNRSSADKKILPSSSSQEKQSEKS 396

Query: 61  LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEELTTCAVR 120
           LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSR+CDACKHPNIVAAYLEELTTCAVR
Sbjct: 397 LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIVAAYLEELTTCAVR 456

Query: 121 RNNSSSRIFVSR 133
           RNNSSSRIFVSR
Sbjct: 457 RNNSSSRIFVSR 468

[Close]

BLAST of Lag0017691 vs. NCBI nr
Match: TYK10816.1 (ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63
Identity = 126/132 (95.45%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFI+RN SS DKKILPSS+SQEK SEKS
Sbjct: 331 MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFIIRNRSSADKKILPSSSSQEKQSEKS 390

Query: 61  LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEELTTCAVR 120
           LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSR+CDACKHPNIVAAYLEELTTCAVR
Sbjct: 391 LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIVAAYLEELTTCAVR 450

Query: 121 RNNSSSRIFVSR 133
           RNNSSSRIFVSR
Sbjct: 451 RNNSSSRIFVSR 462

[Close]

BLAST of Lag0017691 vs. NCBI nr
Match: XP_004141074.1 (ATP-dependent DNA helicase Q-like 3 [Cucumis sativus])

HSP 1 Score: 247.7 bits (631), Expect = 1.0e-61
Identity = 124/132 (93.94%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRN SS DKKILPSS+SQEK  EKS
Sbjct: 337 MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQPEKS 396

Query: 61  LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEELTTCAVR 120
           LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSR+CDACKHPNI+AAYLEELTT AVR
Sbjct: 397 LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTSAVR 456

Query: 121 RNNSSSRIFVSR 133
           RNNSSSRIFVSR
Sbjct: 457 RNNSSSRIFVSR 468

[Close]

BLAST of Lag0017691 vs. ExPASy Swiss-Prot
Match: Q9FT72 (ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana OX=3702 GN=RECQL3 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.6e-38
Identity = 82/144 (56.94%), Postives = 101/144 (70.14%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           ME+FYQESGRAGRDQLPS+S+LYYG++DR++ME++LRN          S N +   S+K 
Sbjct: 337 MESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRN----------SENKKSSSSKKP 396

Query: 61  LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEELTTCAVR 120
            +DF Q+V YCEGS CRRK+ILESFGE+ P   C +TCDACKHPN VA  LEEL T A R
Sbjct: 397 TSDFEQIVTYCEGSGCRRKKILESFGEEFPVQQCKKTCDACKHPNQVAHCLEELMTTASR 456

Query: 121 RNNSSSRIFVSREREMEQAGHMFE 145
           R+N SSRIF++        G   E
Sbjct: 457 RHN-SSRIFITSSNNKTNEGQYSE 469

[Close]

BLAST of Lag0017691 vs. ExPASy Swiss-Prot
Match: O94762 (ATP-dependent DNA helicase Q5 OS=Homo sapiens OX=9606 GN=RECQL5 PE=1 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 2.0e-12
Identity = 41/114 (35.96%), Postives = 60/114 (52.63%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           M  +YQESGRAGRD  PS   LYY   DR ++ F++R   +     L      +   + +
Sbjct: 340 MAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAK----LQEKRGNKASDKAT 399

Query: 61  LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEEL 115
           +  F  +V +CE   CR   I + FG+ +PA  C++ CD C++P  V   LE L
Sbjct: 400 IMAFDALVTFCEELGCRHAAIAKYFGDALPA--CAKGCDHCQNPTAVRRRLEAL 447

[Close]

BLAST of Lag0017691 vs. ExPASy Swiss-Prot
Match: Q8VID5 (ATP-dependent DNA helicase Q5 OS=Mus musculus OX=10090 GN=Recql5 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 9.9e-12
Identity = 40/114 (35.09%), Postives = 59/114 (51.75%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           M  +YQESGRAGRD  PS   LYY   DR ++ F++R   +     L      +   + +
Sbjct: 341 MAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKELAK----LQEKRGNKPSDKAT 400

Query: 61  LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEEL 115
           L  F  +V +CE   CR   I + FG+  PA  C++ CD C++P  +   L+ L
Sbjct: 401 LLAFDALVTFCEEVGCRHAAIAKYFGDAPPA--CAKGCDYCQNPAAITKKLDAL 448

[Close]

BLAST of Lag0017691 vs. ExPASy Swiss-Prot
Match: D4ACP5 (ATP-dependent DNA helicase Q5 OS=Rattus norvegicus OX=10116 GN=Recql5 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11
Identity = 40/114 (35.09%), Postives = 58/114 (50.88%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           M  +YQESGRAGRD  PS   LYY   DR ++ F++R   +     L      +   + +
Sbjct: 341 MAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKELAK----LQEKRGNKPSDKAT 400

Query: 61  LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEEL 115
           L  F  +V +CE   CR   I + FG+  PA  C++ CD C+ P  +   L+ L
Sbjct: 401 LLAFDALVTFCEEVGCRHAAIAKYFGDAPPA--CAKGCDCCQSPAAIRKKLDAL 448

[Close]

BLAST of Lag0017691 vs. ExPASy Swiss-Prot
Match: P35187 (ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SGS1 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.4e-10
Identity = 33/104 (31.73%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 1    MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
            +E +YQE+GRAGRD   S  + Y+   D R M+ +++   ++D+          +  EK 
Sbjct: 981  LEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQKDKNLDR----------ENKEKH 1040

Query: 61   LTDFTQMVEYCEG-SRCRRKQILESFGEQVPASICSRTCDACKH 104
            L    Q++ YC+  + CRRK +L  F E   + +C + CD C++
Sbjct: 1041 LNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSKLCHKNCDNCRN 1074

[Close]

BLAST of Lag0017691 vs. ExPASy TrEMBL
Match: A0A5A7V2G7 (ATP-dependent DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00190 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.2e-63
Identity = 126/132 (95.45%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFI+RN SS DKKILPSS+SQEK SEKS
Sbjct: 337 MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFIIRNRSSADKKILPSSSSQEKQSEKS 396

Query: 61  LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEELTTCAVR 120
           LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSR+CDACKHPNIVAAYLEELTTCAVR
Sbjct: 397 LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIVAAYLEELTTCAVR 456

Query: 121 RNNSSSRIFVSR 133
           RNNSSSRIFVSR
Sbjct: 457 RNNSSSRIFVSR 468

[Close]

BLAST of Lag0017691 vs. ExPASy TrEMBL
Match: A0A5D3CK54 (ATP-dependent DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001320 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.2e-63
Identity = 126/132 (95.45%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFI+RN SS DKKILPSS+SQEK SEKS
Sbjct: 331 MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFIIRNRSSADKKILPSSSSQEKQSEKS 390

Query: 61  LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEELTTCAVR 120
           LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSR+CDACKHPNIVAAYLEELTTCAVR
Sbjct: 391 LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIVAAYLEELTTCAVR 450

Query: 121 RNNSSSRIFVSR 133
           RNNSSSRIFVSR
Sbjct: 451 RNNSSSRIFVSR 462

[Close]

BLAST of Lag0017691 vs. ExPASy TrEMBL
Match: A0A1S3CBQ2 (ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103498866 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.2e-63
Identity = 126/132 (95.45%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFI+RN SS DKKILPSS+SQEK SEKS
Sbjct: 337 MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFIIRNRSSADKKILPSSSSQEKQSEKS 396

Query: 61  LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEELTTCAVR 120
           LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSR+CDACKHPNIVAAYLEELTTCAVR
Sbjct: 397 LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIVAAYLEELTTCAVR 456

Query: 121 RNNSSSRIFVSR 133
           RNNSSSRIFVSR
Sbjct: 457 RNNSSSRIFVSR 468

[Close]

BLAST of Lag0017691 vs. ExPASy TrEMBL
Match: A0A1S3CBB1 (ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103498866 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.2e-63
Identity = 126/132 (95.45%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFI+RN SS DKKILPSS+SQEK SEKS
Sbjct: 337 MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFIIRNRSSADKKILPSSSSQEKQSEKS 396

Query: 61  LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEELTTCAVR 120
           LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSR+CDACKHPNIVAAYLEELTTCAVR
Sbjct: 397 LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIVAAYLEELTTCAVR 456

Query: 121 RNNSSSRIFVSR 133
           RNNSSSRIFVSR
Sbjct: 457 RNNSSSRIFVSR 468

[Close]

BLAST of Lag0017691 vs. ExPASy TrEMBL
Match: A0A0A0LES3 (ATP-dependent DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_2G00090 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 4.9e-62
Identity = 124/132 (93.94%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRN SS DKKILPSS+SQEK  EKS
Sbjct: 244 MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQPEKS 303

Query: 61  LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEELTTCAVR 120
           LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSR+CDACKHPNI+AAYLEELTT AVR
Sbjct: 304 LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTSAVR 363

Query: 121 RNNSSSRIFVSR 133
           RNNSSSRIFVSR
Sbjct: 364 RNNSSSRIFVSR 375

[Close]

BLAST of Lag0017691 vs. TAIR 10
Match: AT4G35740.1 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-39
Identity = 82/144 (56.94%), Postives = 101/144 (70.14%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           ME+FYQESGRAGRDQLPS+S+LYYG++DR++ME++LRN          S N +   S+K 
Sbjct: 337 MESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRN----------SENKKSSSSKKP 396

Query: 61  LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEELTTCAVR 120
            +DF Q+V YCEGS CRRK+ILESFGE+ P   C +TCDACKHPN VA  LEEL T A R
Sbjct: 397 TSDFEQIVTYCEGSGCRRKKILESFGEEFPVQQCKKTCDACKHPNQVAHCLEELMTTASR 456

Query: 121 RNNSSSRIFVSREREMEQAGHMFE 145
           R+N SSRIF++        G   E
Sbjct: 457 RHN-SSRIFITSSNNKTNEGQYSE 469

[Close]

BLAST of Lag0017691 vs. TAIR 10
Match: AT4G35740.2 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-39
Identity = 82/144 (56.94%), Postives = 101/144 (70.14%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           ME+FYQESGRAGRDQLPS+S+LYYG++DR++ME++LRN          S N +   S+K 
Sbjct: 244 MESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRN----------SENKKSSSSKKP 303

Query: 61  LTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRTCDACKHPNIVAAYLEELTTCAVR 120
            +DF Q+V YCEGS CRRK+ILESFGE+ P   C +TCDACKHPN VA  LEEL T A R
Sbjct: 304 TSDFEQIVTYCEGSGCRRKKILESFGEEFPVQQCKKTCDACKHPNQVAHCLEELMTTASR 363

Query: 121 RNNSSSRIFVSREREMEQAGHMFE 145
           R+N SSRIF++        G   E
Sbjct: 364 RHN-SSRIFITSSNNKTNEGQYSE 376

[Close]

BLAST of Lag0017691 vs. TAIR 10
Match: AT3G05740.1 (RECQ helicase l1 )

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-09
Identity = 38/106 (35.85%), Postives = 57/106 (53.77%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSNSQEKLSEKS 60
           +E++YQESGRAGRD L ++ +  Y  +D  R+  +LRN    +     S+ +Q K     
Sbjct: 509 VESYYQESGRAGRDGLQAQCICLYQKKDFSRVVCMLRNGQGRNMDRFKSAMAQAK----- 568

Query: 61  LTDFTQMVEYCE-GSRCRRKQILESFGEQVPASICSRT---CDACK 103
                +M +YCE  + CRR+ +LE FGE     IC  +   CD C+
Sbjct: 569 -----KMQQYCELKTECRRQMLLEYFGESFDRMICKSSLNPCDNCE 604

[Close]

BLAST of Lag0017691 vs. TAIR 10
Match: AT1G10930.1 (DNA helicase (RECQl4A) )

HSP 1 Score: 60.5 bits (145), Expect = 2.1e-09
Identity = 37/106 (34.91%), Postives = 57/106 (53.77%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSS----NSQEKL 60
           +E ++QE GRAGRD   S  +LYYG  D  R++ ++ +   VD+  + +      S  +L
Sbjct: 754 IEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMI-SQGGVDQSPMATGYNRVASSGRL 813

Query: 61  SEKSLTDFTQMVEYCEGS-RCRRKQILESFGEQVPASICSRTCDAC 102
            E +  +  +MV YCE    CRR   L   GE+  ++ C +TCD C
Sbjct: 814 LETNTENLLRMVRYCENEVECRRFLQLVHLGEKFDSTNCKKTCDNC 858

[Close]

BLAST of Lag0017691 vs. TAIR 10
Match: AT1G60930.1 (RECQ helicase L4B )

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-08
Identity = 35/111 (31.53%), Postives = 54/111 (48.65%), Query Frame = 0


Query: 1   MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNSSSVDKKILPSSN---SQEKLS 60
           +E ++QE GRAGRD   S  +LYY   D  R++ ++        ++    N   S  ++ 
Sbjct: 770 IEGYHQECGRAGRDGQRSSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCKASSGRML 829

Query: 61  EKSLTDFTQMVEYCEGS-RCRRKQILESFGEQVPASICSRTCDACKHPNIV 108
           E +  +  +MV YCE    CRR   L   GE+  ++ C  TCD C    I+
Sbjct: 830 ETNTENLLRMVSYCENEVDCRRFLQLVHLGEKFDSTNCKNTCDNCSSSKIL 880

The following BLAST results are available for this feature:

BLAST of Lag0017691 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061460.1	2.4e-63	95.45	ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008459900.1	2.4e-63	95.45	PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X2 [Cucumis melo]	[more]
XP_008459885.1	2.4e-63	95.45	PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis melo]	[more]
TYK10816.1	2.4e-63	95.45	ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_004141074.1	1.0e-61	93.94	ATP-dependent DNA helicase Q-like 3 [Cucumis sativus]	[more]

BLAST of Lag0017691 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FT72	1.6e-38	56.94	ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana OX=3702 GN=RECQL3 PE...	[more]
O94762	2.0e-12	35.96	ATP-dependent DNA helicase Q5 OS=Homo sapiens OX=9606 GN=RECQL5 PE=1 SV=2	[more]
Q8VID5	9.9e-12	35.09	ATP-dependent DNA helicase Q5 OS=Mus musculus OX=10090 GN=Recql5 PE=1 SV=1	[more]
D4ACP5	1.3e-11	35.09	ATP-dependent DNA helicase Q5 OS=Rattus norvegicus OX=10116 GN=Recql5 PE=1 SV=1	[more]
P35187	5.4e-10	31.73	ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2...	[more]

BLAST of Lag0017691 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V2G7	1.2e-63	95.45	ATP-dependent DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A5D3CK54	1.2e-63	95.45	ATP-dependent DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3CBQ2	1.2e-63	95.45	ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103498866 PE=3 SV=1	[more]
A0A1S3CBB1	1.2e-63	95.45	ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103498866 PE=3 SV=1	[more]
A0A0A0LES3	4.9e-62	93.94	ATP-dependent DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_2G00090 PE=3 SV=1	[more]

BLAST of Lag0017691 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35740.1	1.2e-39	56.94	DEAD/DEAH box RNA helicase family protein	[more]
AT4G35740.2	1.2e-39	56.94	DEAD/DEAH box RNA helicase family protein	[more]
AT3G05740.1	1.2e-09	35.85	RECQ helicase l1	[more]
AT1G10930.1	2.1e-09	34.91	DNA helicase (RECQl4A)	[more]
AT1G60930.1	2.3e-08	31.53	RECQ helicase L4B	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032284	ATP-dependent DNA helicase RecQ, zinc-binding domain	PFAM	PF16124	RecQ_Zn_bind	coord: 27..102 e-value: 4.5E-14 score: 52.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..120 e-value: 3.0E-23 score: 84.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..113
None	No IPR available	PANTHER	PTHR13710:SF134	ATP-DEPENDENT DNA HELICASE Q-LIKE 3	coord: 1..146
None	No IPR available	PANTHER	PTHR13710	DNA HELICASE RECQ FAMILY MEMBER	coord: 1..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017691.1	Lag0017691.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034605	cellular response to heat
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003678	DNA helicase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding