Lag0017673 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017673
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrotrans_gag domain-containing protein
Location	chr5: 6634153 .. 6635312 (-)
RNA-Seq Expression	Lag0017673
Synteny	Lag0017673

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGAGGCCGAGGAGCCGAGGCCGACGAGAGGAAGTTGACGCCAAAATCGCCGCCCTTGAGGATAAGGTGAGGGGCATGGATCGAAGTTTGTCCAGGATACTTCAAATCTTGGATAAACCTGGTCCTAGCACCAAACTCCATGAGGAGGGCTTGATTAGAGACCCGAAGAAGGGGAAGGAACTAGTCGAGTACGTGGATGAGTCGGATACAGGATCAAAGGAAAAGAGACCAACAATGCGACCAACAAGGTCAAGGGGGCTGAAGCATGCAGGGCGCACAGTTCTGAGAGCCTAGAACCAAGTACCAGCCGTAGAACAGACCTGAGAAACCTAATTGAAGAGAAGCGTAGAAGTGCCAAAGCTGTCGAGTCCGAGGCCAAAGCTGTCGAAGTTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGTCGAGGCCGAGGCTAAGAAGGACAATCTCCCTTGGAAAACTGAGCTTCTGAACACACTAAAGGAGCTCGGAAATCCTCAGGGAGACCTACAGAAGTCAAAGGACCTTGGAGAACAAGACTTGGAAGAACTGATCGATCAAGTCGCCCCGTCCTTCACGGAAGAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAAGTACCTACATTCAAACCGTATGATGGCAAAAAAGACCCCGTGCAGCATCTAAACGCCTACAAAAACTGGATGGATTTTCACGGCGTCTCAAATGCAATCAGATGTCGAGCATTCTTTTTCACTCTGACAGGATCAAACAAGTACTGGTTTGAAAGGTTGAAAAGTAGATCCATAAGCTCTTTCAAGGAATTAGCTCGAGCGTTCCTTGCGCAGTTTATGGGAGCCAGAGAACAGTGCAAGCCTAATATCAACCTCTTAACCGTCAAACAACAGCCAGGTGAGAGCTTGCGCGATTGTATAACACGTTTTAATGAGGAAGTACGACAGGTTGAGGGATATAGTGAGGAAGCAATCCTAGTAGCCATCACAGTGGGACTAGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCAGAGTTTGTTTCCCGGGCGCAGAAATACATGAGCGCAAAGGAGTTGCTCAATTCAAAGAAGTCAGGACGAGAGCACAAGAGACATTCTTCAGTCGATTAG

mRNA sequence

ATGGAGAAGAGGCCGAGGAGCCGAGGCCGACGAGAGGAAGTTGACGCCAAAATCGCCGCCCTTGAGGATAAGGTGAGGGGCATGGATCGAAGTTTGTCCAGGATACTTCAAATCTTGGATAAACCTGGTCCTAGCACCAAACTCCATGAGGAGGGCTTGATTAGAGACCCGAAGAAGGGGAAGGAACTAGTCGAGGCGCACAGTTCTGAGAGCCTAGAACCAAGTACCAGCCGTAGAACAGACCTGAGAAACCTAATTGAAGAGAAGCGTAGAAGTGCCAAAGCTGTCGAGTCCGAGGCCAAAGCTGTCGAAGTTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGTCGAGGCCGAGGCTAAGAAGGACAATCTCCCTTGGAAAACTGAGCTTCTGAACACACTAAAGGAGCTCGGAAATCCTCAGGGAGACCTACAGAAGTCAAAGGACCTTGGAGAACAAGACTTGGAAGAACTGATCGATCAAGTCGCCCCGTCCTTCACGGAAGAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAAGTACCTACATTCAAACCGTATGATGGCAAAAAAGACCCCGTGCAGCATCTAAACGCCTACAAAAACTGGATGGATTTTCACGGCGTCTCAAATGCAATCAGATGTCGAGCATTCTTTTTCACTCTGACAGGATCAAACAAGTACTGGTTTGAAAGGTTGAAAAGTAGATCCATAAGCTCTTTCAAGGAATTAGCTCGAGCGTTCCTTGCGCAGTTTATGGGAGCCAGAGAACAGTGCAAGCCTAATATCAACCTCTTAACCGTCAAACAACAGCCAGGTGAGAGCTTGCGCGATTGTATAACACGTTTTAATGAGGAAGTACGACAGGTTGAGGGATATAGTGAGGAAGCAATCCTAGTAGCCATCACAGTGGGACTAGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCAGAGTTTGTTTCCCGGGCGCAGAAATACATGAGCGCAAAGGAGTTGCTCAATTCAAAGAAGTCAGGACGAGAGCACAAGAGACATTCTTCAGTCGATTAG

Coding sequence (CDS)

ATGGAGAAGAGGCCGAGGAGCCGAGGCCGACGAGAGGAAGTTGACGCCAAAATCGCCGCCCTTGAGGATAAGGTGAGGGGCATGGATCGAAGTTTGTCCAGGATACTTCAAATCTTGGATAAACCTGGTCCTAGCACCAAACTCCATGAGGAGGGCTTGATTAGAGACCCGAAGAAGGGGAAGGAACTAGTCGAGGCGCACAGTTCTGAGAGCCTAGAACCAAGTACCAGCCGTAGAACAGACCTGAGAAACCTAATTGAAGAGAAGCGTAGAAGTGCCAAAGCTGTCGAGTCCGAGGCCAAAGCTGTCGAAGTTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGTCGAGGCCGAGGCTAAGAAGGACAATCTCCCTTGGAAAACTGAGCTTCTGAACACACTAAAGGAGCTCGGAAATCCTCAGGGAGACCTACAGAAGTCAAAGGACCTTGGAGAACAAGACTTGGAAGAACTGATCGATCAAGTCGCCCCGTCCTTCACGGAAGAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAAGTACCTACATTCAAACCGTATGATGGCAAAAAAGACCCCGTGCAGCATCTAAACGCCTACAAAAACTGGATGGATTTTCACGGCGTCTCAAATGCAATCAGATGTCGAGCATTCTTTTTCACTCTGACAGGATCAAACAAGTACTGGTTTGAAAGGTTGAAAAGTAGATCCATAAGCTCTTTCAAGGAATTAGCTCGAGCGTTCCTTGCGCAGTTTATGGGAGCCAGAGAACAGTGCAAGCCTAATATCAACCTCTTAACCGTCAAACAACAGCCAGGTGAGAGCTTGCGCGATTGTATAACACGTTTTAATGAGGAAGTACGACAGGTTGAGGGATATAGTGAGGAAGCAATCCTAGTAGCCATCACAGTGGGACTAGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCAGAGTTTGTTTCCCGGGCGCAGAAATACATGAGCGCAAAGGAGTTGCTCAATTCAAAGAAGTCAGGACGAGAGCACAAGAGACATTCTTCAGTCGATTAG

Protein sequence

MEKRPRSRGRREEVDAKIAALEDKVRGMDRSLSRILQILDKPGPSTKLHEEGLIRDPKKGKELVEAHSSESLEPSTSRRTDLRNLIEEKRRSAKAVESEAKAVEVEARAAEAEARAVEAEAKKDNLPWKTELLNTLKELGNPQGDLQKSKDLGEQDLEELIDQVAPSFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLNSKKSGREHKRHSSVD

Homology

[Close]

BLAST of Lag0017673 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 205.7 bits (522), Expect = 6.7e-49
Identity = 132/303 (43.56%), Postives = 179/303 (59.08%), Query Frame = 0


Query: 50  EEGLIRDPKKGKELVEAHSSESLEPSTSR-----RTDLRNLIEEKRRSAKAVESEA-KAV 109
           E  L+RDPKKGK   E+ + ES     S+      T  R  I + R++ K  +S A    
Sbjct: 71  EVPLVRDPKKGKGPTESDTEESTNSVGSKLRIGGNTRQRTRIFDPRKTKKQHKSPAPNGG 130

Query: 110 EVEARAAEAEARAVEAEAKKDNLPWKTELLNTLKELGNPQGDLQKSKDLGEQDLEELIDQ 169
           + +     +E  +++ + K  + P  +E  ++ KE G               DLEEL+DQ
Sbjct: 131 KSDHDDRNSEPISLD-KGKPADRPESSEKRHSHKEKG--------------FDLEELLDQ 190

Query: 170 VAPSFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFT 229
               FTEE+M+ +VP KFK+PT K +D   DPV HL+AY+ WMD +GVS A+RCR F  T
Sbjct: 191 ADSPFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTT 250

Query: 230 LTGSNKYWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCIT 289
           L GS + WF +LK  SISSFK LARAF+ QF+G R + +P   LLT+KQ+  ESLRD + 
Sbjct: 251 LNGSARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVA 310

Query: 290 RFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLN 347
           RFNEE  QVEG ++   L+A   G+ DE L  S GK  P T++E +SRAQ+YMSA E   
Sbjct: 311 RFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFY 358

[Close]

BLAST of Lag0017673 vs. NCBI nr
Match: XP_022159109.1 (uncharacterized protein LOC111025548 [Momordica charantia])

HSP 1 Score: 204.5 bits (519), Expect = 1.5e-48
Identity = 109/216 (50.46%), Postives = 144/216 (66.67%), Query Frame = 0


Query: 133 LNTLKELGNPQGDLQK--SKDLGEQDLEELIDQVAPSFTEEVMKAEVPQKFKVPTFKPYD 192
           LN  K +  P+   ++   K+ G  DLEEL+ Q    FTEE+M+ +VP KFK+PT KP+D
Sbjct: 49  LNKGKPIDRPESSEKRHNQKEKG-FDLEELLGQADSPFTEEIMREKVPPKFKLPTVKPFD 108

Query: 193 GKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSFKELARAF 252
           G  +PV HL+AY+ WMD +GVS+AIRCR F  TL GS + WF +LK  SISSFK LARAF
Sbjct: 109 GMTEPVDHLDAYREWMDIYGVSDAIRCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAF 168

Query: 253 LAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLED 312
           + QF+G R + +P   LLT+KQ+  ESL D + RFNEE  Q+EG ++   L+A   G+ D
Sbjct: 169 MTQFVGGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQLEGLTDAVSLLAFMSGVRD 228

Query: 313 ERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLNSKK 347
           E L  S  K  P T++E +SRAQ+YMSA E   SK+
Sbjct: 229 EHLSFSFEKRTPSTFSEALSRAQRYMSASEFCYSKR 263

[Close]

BLAST of Lag0017673 vs. NCBI nr
Match: XP_022147761.1 (uncharacterized protein LOC111016619 [Momordica charantia])

HSP 1 Score: 186.8 bits (473), Expect = 3.2e-43
Identity = 90/174 (51.72%), Postives = 122/174 (70.11%), Query Frame = 0


Query: 173 MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWF 232
           MK +VP KFK+P  K YDG  DP+ HL+ Y  W D +G++ AIRCR F FTLTGS + WF
Sbjct: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60

Query: 233 ERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEVRQV 292
           ++LK +SISSFKELARAF+ QF G   + +P   LLT+KQ+  ESL+D + RFN+E  QV
Sbjct: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120

Query: 293 EGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLNSKK 347
           EG ++  +L+    G++DE+L+ S GK    T++E  SRAQ YMS  EL++SK+
Sbjct: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKR 174

[Close]

BLAST of Lag0017673 vs. NCBI nr
Match: XP_022150035.1 (uncharacterized protein LOC111018307 [Momordica charantia])

HSP 1 Score: 186.4 bits (472), Expect = 4.2e-43
Identity = 94/177 (53.11%), Postives = 121/177 (68.36%), Query Frame = 0


Query: 170 EEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNK 229
           EE+MK +VP KFK+PT K +DG  D V HL+AY+ WMD +GVS A++CR F  TL+GS +
Sbjct: 2   EEIMKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIYGVSEAVKCRVFSTTLSGSAR 61

Query: 230 YWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEV 289
            WF +LK  SISSFK LA+AF+ QF+G R + +P   LLT+KQ+  ESL D + RFNEE 
Sbjct: 62  VWFRQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDYVARFNEEK 121

Query: 290 RQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLNSKK 347
            QVEG +    L+A    + DE L  S GK  P T++E +SRAQKYMSA E   SK+
Sbjct: 122 LQVEGLTNAVSLMAFMSDIRDEHLSFSFGKKTPSTFSEALSRAQKYMSAGEFFFSKR 178

[Close]

BLAST of Lag0017673 vs. NCBI nr
Match: XP_022158344.1 (uncharacterized protein LOC111024851 [Momordica charantia])

HSP 1 Score: 184.5 bits (467), Expect = 1.6e-42
Identity = 97/197 (49.24%), Postives = 126/197 (63.96%), Query Frame = 0


Query: 173 MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWF 232
           MK +   KFK+P    YDG  DP+ HL+AY+ W D + +  AIRCR F FTLTGS + WF
Sbjct: 1   MKEKARPKFKLPAIAEYDGSADPIDHLDAYREWADIYDIREAIRCRVFSFTLTGSARNWF 60

Query: 233 ERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEVRQV 292
            +LK  SISSFKELA AF+ QF+G R + KP   LLT+KQ+  ESL++ + RFNEE  QV
Sbjct: 61  RQLKRNSISSFKELAEAFVTQFVGGRVKSKPVTYLLTIKQKATESLKEYVARFNEEKLQV 120

Query: 293 EGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELL---------- 352
           EG ++   L+A   G++DERL+ S GK  P T+ E +SRAQKYMSA EL+          
Sbjct: 121 EGLTDAVALIAFVSGVKDERLVFSFGKRTPGTFMEALSRAQKYMSAGELIHLSRDLERER 180

Query: 353 ---NSKKSGREHKRHSS 357
              ++K+  R  KRH S
Sbjct: 181 ANYSTKRERRGEKRHRS 197

[Close]

BLAST of Lag0017673 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.3e-49
Identity = 132/303 (43.56%), Postives = 179/303 (59.08%), Query Frame = 0


Query: 50  EEGLIRDPKKGKELVEAHSSESLEPSTSR-----RTDLRNLIEEKRRSAKAVESEA-KAV 109
           E  L+RDPKKGK   E+ + ES     S+      T  R  I + R++ K  +S A    
Sbjct: 71  EVPLVRDPKKGKGPTESDTEESTNSVGSKLRIGGNTRQRTRIFDPRKTKKQHKSPAPNGG 130

Query: 110 EVEARAAEAEARAVEAEAKKDNLPWKTELLNTLKELGNPQGDLQKSKDLGEQDLEELIDQ 169
           + +     +E  +++ + K  + P  +E  ++ KE G               DLEEL+DQ
Sbjct: 131 KSDHDDRNSEPISLD-KGKPADRPESSEKRHSHKEKG--------------FDLEELLDQ 190

Query: 170 VAPSFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFT 229
               FTEE+M+ +VP KFK+PT K +D   DPV HL+AY+ WMD +GVS A+RCR F  T
Sbjct: 191 ADSPFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTT 250

Query: 230 LTGSNKYWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCIT 289
           L GS + WF +LK  SISSFK LARAF+ QF+G R + +P   LLT+KQ+  ESLRD + 
Sbjct: 251 LNGSARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVA 310

Query: 290 RFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLN 347
           RFNEE  QVEG ++   L+A   G+ DE L  S GK  P T++E +SRAQ+YMSA E   
Sbjct: 311 RFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFY 358

[Close]

BLAST of Lag0017673 vs. ExPASy TrEMBL
Match: A0A6J1E1E7 (uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025548 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 7.3e-49
Identity = 109/216 (50.46%), Postives = 144/216 (66.67%), Query Frame = 0


Query: 133 LNTLKELGNPQGDLQK--SKDLGEQDLEELIDQVAPSFTEEVMKAEVPQKFKVPTFKPYD 192
           LN  K +  P+   ++   K+ G  DLEEL+ Q    FTEE+M+ +VP KFK+PT KP+D
Sbjct: 49  LNKGKPIDRPESSEKRHNQKEKG-FDLEELLGQADSPFTEEIMREKVPPKFKLPTVKPFD 108

Query: 193 GKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSFKELARAF 252
           G  +PV HL+AY+ WMD +GVS+AIRCR F  TL GS + WF +LK  SISSFK LARAF
Sbjct: 109 GMTEPVDHLDAYREWMDIYGVSDAIRCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAF 168

Query: 253 LAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLED 312
           + QF+G R + +P   LLT+KQ+  ESL D + RFNEE  Q+EG ++   L+A   G+ D
Sbjct: 169 MTQFVGGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQLEGLTDAVSLLAFMSGVRD 228

Query: 313 ERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLNSKK 347
           E L  S  K  P T++E +SRAQ+YMSA E   SK+
Sbjct: 229 EHLSFSFEKRTPSTFSEALSRAQRYMSASEFCYSKR 263

[Close]

BLAST of Lag0017673 vs. ExPASy TrEMBL
Match: A0A6J1D3B7 (uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016619 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.6e-43
Identity = 90/174 (51.72%), Postives = 122/174 (70.11%), Query Frame = 0


Query: 173 MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWF 232
           MK +VP KFK+P  K YDG  DP+ HL+ Y  W D +G++ AIRCR F FTLTGS + WF
Sbjct: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60

Query: 233 ERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEVRQV 292
           ++LK +SISSFKELARAF+ QF G   + +P   LLT+KQ+  ESL+D + RFN+E  QV
Sbjct: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120

Query: 293 EGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLNSKK 347
           EG ++  +L+    G++DE+L+ S GK    T++E  SRAQ YMS  EL++SK+
Sbjct: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKR 174

[Close]

BLAST of Lag0017673 vs. ExPASy TrEMBL
Match: A0A6J1D7D2 (uncharacterized protein LOC111018307 OS=Momordica charantia OX=3673 GN=LOC111018307 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.1e-43
Identity = 94/177 (53.11%), Postives = 121/177 (68.36%), Query Frame = 0


Query: 170 EEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNK 229
           EE+MK +VP KFK+PT K +DG  D V HL+AY+ WMD +GVS A++CR F  TL+GS +
Sbjct: 2   EEIMKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIYGVSEAVKCRVFSTTLSGSAR 61

Query: 230 YWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEV 289
            WF +LK  SISSFK LA+AF+ QF+G R + +P   LLT+KQ+  ESL D + RFNEE 
Sbjct: 62  VWFRQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDYVARFNEEK 121

Query: 290 RQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLNSKK 347
            QVEG +    L+A    + DE L  S GK  P T++E +SRAQKYMSA E   SK+
Sbjct: 122 LQVEGLTNAVSLMAFMSDIRDEHLSFSFGKKTPSTFSEALSRAQKYMSAGEFFFSKR 178

[Close]

BLAST of Lag0017673 vs. ExPASy TrEMBL
Match: A0A6J1DZ49 (uncharacterized protein LOC111024851 OS=Momordica charantia OX=3673 GN=LOC111024851 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 7.8e-43
Identity = 97/197 (49.24%), Postives = 126/197 (63.96%), Query Frame = 0


Query: 173 MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWF 232
           MK +   KFK+P    YDG  DP+ HL+AY+ W D + +  AIRCR F FTLTGS + WF
Sbjct: 1   MKEKARPKFKLPAIAEYDGSADPIDHLDAYREWADIYDIREAIRCRVFSFTLTGSARNWF 60

Query: 233 ERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEVRQV 292
            +LK  SISSFKELA AF+ QF+G R + KP   LLT+KQ+  ESL++ + RFNEE  QV
Sbjct: 61  RQLKRNSISSFKELAEAFVTQFVGGRVKSKPVTYLLTIKQKATESLKEYVARFNEEKLQV 120

Query: 293 EGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELL---------- 352
           EG ++   L+A   G++DERL+ S GK  P T+ E +SRAQKYMSA EL+          
Sbjct: 121 EGLTDAVALIAFVSGVKDERLVFSFGKRTPGTFMEALSRAQKYMSAGELIHLSRDLERER 180

Query: 353 ---NSKKSGREHKRHSS 357
              ++K+  R  KRH S
Sbjct: 181 ANYSTKRERRGEKRHRS 197

The following BLAST results are available for this feature:

BLAST of Lag0017673 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	6.7e-49	43.56	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022159109.1	1.5e-48	50.46	uncharacterized protein LOC111025548 [Momordica charantia]	[more]
XP_022147761.1	3.2e-43	51.72	uncharacterized protein LOC111016619 [Momordica charantia]	[more]
XP_022150035.1	4.2e-43	53.11	uncharacterized protein LOC111018307 [Momordica charantia]	[more]
XP_022158344.1	1.6e-42	49.24	uncharacterized protein LOC111024851 [Momordica charantia]	[more]

BLAST of Lag0017673 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0017673 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	3.3e-49	43.56	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1E1E7	7.3e-49	50.46	uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1D3B7	1.6e-43	51.72	uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1D7D2	2.1e-43	53.11	uncharacterized protein LOC111018307 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1DZ49	7.8e-43	49.24	uncharacterized protein LOC111024851 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Lag0017673 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 11..31
None	No IPR available	COILS	Coil	Coil	coord: 79..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..81
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 220..309 e-value: 2.7E-11 score: 43.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017673.1	Lag0017673.1	mRNA