Lag0017661 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGGATCCTCAACATGCTCCAGTGCTGCCGCGGCTCAGCCGTCTCTCCTTCTTTCTCTCGCTCCAGCGCCGCCGCGAGACTCAGCCGTCTCTCTCTCTTTCTCTCGCTCTAGCGTTGCCGCAAACTCAACCGTGTCTCTCTCTTTCTCTCGCTTGTCTCTCTCTTTCTCTCGCTCCAGCGCCGCCACAAACTCAACCATTCTCTCTTTCTCGCTCCAGCTCCGATTGGATCGAGGTACGCGCTTAAGTAGGGCAACTCGAGACGTTTCACTGCATTTCCAGCCTGATTTAATGATCGGTTATATTTTCAATGGACAGCGGAAATGTTCAATTCTTCTCCTCCTCCTCCTTTGAAAAGGCTTTCACAGTATGCCCCATGTTGATTCGTGTCATGAAGGTCTGTTGATGCCCATTCCAATGTTGCAACTTGGTCTAATACTGATACAATAATTTGAAATTTACTTCACTCGTTTTCTGATTCTTTGATAGGTCCAACCTGAAAAAATTTAATCTAATCATTGGTAGTGGTGGAAAAAAGGTGAAGAGAATTATAGAAGAAACAGGAGTCGAGGCTATTGACACTCAAGATGAAGGGATAGTATGTTTACAGGAATTTCATTTAGCCAACTTAGCCAACTATGACTCTTTTGACTGCAATTTTGATATGTTTTTCTTTTGTAGGTTAAAATTACTGCAAAGGATTTCTCAAGCTTGGAAAAATCTAAAGCTATTATTAGCAATCTAACTATGGTTCCTACCGTTGGTGATATATAA ATGTGGGATCCTCAACATGCTCCAGTGCTGCCGCGGCTCAGCCGTCTCTCCTTCTTTCTCTCGCTCCAGCGCCGCCGCGAGACTCAGCCGTCTCTCTCTCTTTCTCTCGCTCTAGCGTTGCCGCAAACTCAACCGTCGGAAATGTTCAATTCTTCTCCTCCTCCTCCTTTGAAAAGGCTTTCACAGTCCAACCTGAAAAAATTTAATCTAATCATTGGTAGTGGTGGAAAAAAGGTGAAGAGAATTATAGAAGAAACAGGAGTCGAGGCTATTGACACTCAAGATGAAGGGATAGTTAAAATTACTGCAAAGGATTTCTCAAGCTTGGAAAAATCTAAAGCTATTATTAGCAATCTAACTATGGTTCCTACCGTTGGTGATATATAA ATGTGGGATCCTCAACATGCTCCAGTGCTGCCGCGGCTCAGCCGTCTCTCCTTCTTTCTCTCGCTCCAGCGCCGCCGCGAGACTCAGCCGTCTCTCTCTCTTTCTCTCGCTCTAGCGTTGCCGCAAACTCAACCGTCGGAAATGTTCAATTCTTCTCCTCCTCCTCCTTTGAAAAGGCTTTCACAGTCCAACCTGAAAAAATTTAATCTAATCATTGGTAGTGGTGGAAAAAAGGTGAAGAGAATTATAGAAGAAACAGGAGTCGAGGCTATTGACACTCAAGATGAAGGGATAGTTAAAATTACTGCAAAGGATTTCTCAAGCTTGGAAAAATCTAAAGCTATTATTAGCAATCTAACTATGGTTCCTACCGTTGGTGATATATAA MWDPQHAPVLPRLSRLSFFLSLQRRRETQPSLSLSLALALPQTQPSEMFNSSPPPPLKRLSQSNLKKFNLIIGSGGKKVKRIIEETGVEAIDTQDEGIVKITAKDFSSLEKSKAIISNLTMVPTVGDI Homology
BLAST of Lag0017661 vs. NCBI nr
Match: XP_022147753.1 (probable polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X2 [Momordica charantia]) HSP 1 Score: 121.3 bits (303), Expect = 6.0e-24 Identity = 68/91 (74.73%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of Lag0017661 vs. NCBI nr
Match: XP_022147752.1 (probable polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X1 [Momordica charantia]) HSP 1 Score: 121.3 bits (303), Expect = 6.0e-24 Identity = 68/91 (74.73%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of Lag0017661 vs. NCBI nr
Match: KAF3442818.1 (hypothetical protein FNV43_RR16736 [Rhamnella rubrinervis]) HSP 1 Score: 118.6 bits (296), Expect = 3.9e-23 Identity = 67/91 (73.63%), Postives = 72/91 (79.12%), Query Frame = 0
BLAST of Lag0017661 vs. NCBI nr
Match: KAF3441239.1 (hypothetical protein FNV43_RR15152 [Rhamnella rubrinervis]) HSP 1 Score: 118.6 bits (296), Expect = 3.9e-23 Identity = 66/91 (72.53%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of Lag0017661 vs. NCBI nr
Match: PON42102.1 (Polyribonucleotide nucleotidyltransferase [Trema orientale]) HSP 1 Score: 117.1 bits (292), Expect = 1.1e-22 Identity = 65/91 (71.43%), Postives = 72/91 (79.12%), Query Frame = 0
BLAST of Lag0017661 vs. ExPASy Swiss-Prot
Match: Q69LE7 (Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PNP1 PE=2 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.1e-20 Identity = 57/91 (62.64%), Postives = 66/91 (72.53%), Query Frame = 0
BLAST of Lag0017661 vs. ExPASy Swiss-Prot
Match: Q8GZQ3 (Polyribonucleotide nucleotidyltransferase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNP1 PE=1 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.5e-17 Identity = 53/91 (58.24%), Postives = 64/91 (70.33%), Query Frame = 0
BLAST of Lag0017661 vs. ExPASy Swiss-Prot
Match: Q6MDI2 (Polyribonucleotide nucleotidyltransferase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=pnp PE=3 SV=2) HSP 1 Score: 56.6 bits (135), Expect = 2.4e-07 Identity = 40/97 (41.24%), Postives = 56/97 (57.73%), Query Frame = 0
BLAST of Lag0017661 vs. ExPASy Swiss-Prot
Match: C0R0E0 (Polyribonucleotide nucleotidyltransferase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) OX=565034 GN=pnp PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.6e-06 Identity = 28/73 (38.36%), Postives = 45/73 (61.64%), Query Frame = 0
BLAST of Lag0017661 vs. ExPASy Swiss-Prot
Match: B8CW78 (Polyribonucleotide nucleotidyltransferase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=pnp PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.5e-06 Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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