Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGCTGCTACTCAACCTCCTTCTACTCGTCCTGCTTTTAATGGTGGCAGGGGACACGGTCACAGCCGCAACAATGGTCGTGGACGTTTTCCTCCTCAGAACGGAAATGACAGAGGTCGTGTCCCTAATTTTACAAATTCTTTATCTACTGACAATCGTCCCTCCTGTCAAATTTGTCAGCGACCAAGTCACAGCGCCTTGGATTGTTATAATAGGATGAACTATCACTATCAGGGTCGTCATCCACCACCTCAACTTGCTGCTATGGTGGCCTCACAAAACAACTCTTATTTGAATATGACGAATCCCTCTGCTATTCCATTTGTTTTGCCGTGGTTTGTTGATTTTGGGTGCAATGCCCACGTTACAGCTGATCTTGGTAACTTAATGGTGGCTTCTGAATATAATGGCGAGAAGCATATTTCTGTTGGTAGTGGGCAAAGTCTCCCTATAACTCACACAGGTTCTGACACATTTCCTATTTCATCTACTTCCTCTTTGTCCTTATCAAATCTTCTCTGTGCGTGCCTCATATCTCAAATAATCTTTGTCTATATATCAACTATGTGTCGACAATAATTGCATTGTTATTTTTTATTCTGGTCGATTCTCTATTCAGGACAAAACTTTGGGGTGCCTTCTCTTCCAAGGACCTAATAAAAAATGGTCTCTATCCTATCACTCCATCTGTTGCCCCTTCCATGTCTACCAACTCATCAATCTCTTCTCCTGTTGCTCATATTGGCGTCAAGTCATCCTCTACTCTATGGCATAATCAGTTAGGCCATCCTAACTCGCAAGTTCTCCATACGGTTCTTCGTCATCTTAGTTTACCTATATGTAATAACAATCGTTGTGTCTACGAGTTTTGTCTTTCTAGTAAGATGCATAAACTTCATTTTCCAAAATATACTACGTTTTCCATGTATCCATTGGAGTTGCTTCATAGTGATGTATATTGTATGGGGTCCAACTCCTGA
mRNA sequence
ATGTTTGCTGCTACTCAACCTCCTTCTACTCGTCCTGCTTTTAATGGTGGCAGGGGACACGGTCACAGCCGCAACAATGGTCGTGGACGTTTTCCTCCTCAGAACGGAAATGACAGAGGTCGTGTCCCTAATTTTACAAATTCTTTATCTACTGACAATCGTCCCTCCTGTCAAATTTGTCAGCGACCAAGTCACAGCGCCTTGGATTGTTATAATAGGATGAACTATCACTATCAGGGTCGTCATCCACCACCTCAACTTGCTGCTATGGTGGCCTCACAAAACAACTCTTATTTGAATATGACGAATCCCTCTGCTATTCCATTTGTTTTGCCGTGGTTTGTTGATTTTGGGTGCAATGCCCACGTTACAGCTGATCTTGGTAACTTAATGGTGGCTTCTGAATATAATGGCGAGAAGCATATTTCTGTTGGTAGTGGGCAAAGTCTCCCTATAACTCACACAGGTTCTGACACATTTCCTATTTCATCTACTTCCTCTTTGTCCTTATCAAATCTTCTCTGTGCGACAAAACTTTGGGGTGCCTTCTCTTCCAAGGACCTAATAAAAAATGGTCTCTATCCTATCACTCCATCTGTTGCCCCTTCCATGTCTACCAACTCATCAATCTCTTCTCCTGTTGCTCATATTGGCGTCAAGTCATCCTCTACTCTATGGCATAATCAGTTAGGCCATCCTAACTCGCAAGTTCTCCATACGGTTCTTCGTCATCTTAGTTTACCTATATGTAATAACAATCGTTGTGTCTACGAGTTTTGTCTTTCTAGTAAGATGCATAAACTTCATTTTCCAAAATATACTACGTTTTCCATGTATCCATTGGAGTTGCTTCATAGTGATGTATATTGTATGGGGTCCAACTCCTGA
Coding sequence (CDS)
ATGTTTGCTGCTACTCAACCTCCTTCTACTCGTCCTGCTTTTAATGGTGGCAGGGGACACGGTCACAGCCGCAACAATGGTCGTGGACGTTTTCCTCCTCAGAACGGAAATGACAGAGGTCGTGTCCCTAATTTTACAAATTCTTTATCTACTGACAATCGTCCCTCCTGTCAAATTTGTCAGCGACCAAGTCACAGCGCCTTGGATTGTTATAATAGGATGAACTATCACTATCAGGGTCGTCATCCACCACCTCAACTTGCTGCTATGGTGGCCTCACAAAACAACTCTTATTTGAATATGACGAATCCCTCTGCTATTCCATTTGTTTTGCCGTGGTTTGTTGATTTTGGGTGCAATGCCCACGTTACAGCTGATCTTGGTAACTTAATGGTGGCTTCTGAATATAATGGCGAGAAGCATATTTCTGTTGGTAGTGGGCAAAGTCTCCCTATAACTCACACAGGTTCTGACACATTTCCTATTTCATCTACTTCCTCTTTGTCCTTATCAAATCTTCTCTGTGCGACAAAACTTTGGGGTGCCTTCTCTTCCAAGGACCTAATAAAAAATGGTCTCTATCCTATCACTCCATCTGTTGCCCCTTCCATGTCTACCAACTCATCAATCTCTTCTCCTGTTGCTCATATTGGCGTCAAGTCATCCTCTACTCTATGGCATAATCAGTTAGGCCATCCTAACTCGCAAGTTCTCCATACGGTTCTTCGTCATCTTAGTTTACCTATATGTAATAACAATCGTTGTGTCTACGAGTTTTGTCTTTCTAGTAAGATGCATAAACTTCATTTTCCAAAATATACTACGTTTTCCATGTATCCATTGGAGTTGCTTCATAGTGATGTATATTGTATGGGGTCCAACTCCTGA
Protein sequence
MFAATQPPSTRPAFNGGRGHGHSRNNGRGRFPPQNGNDRGRVPNFTNSLSTDNRPSCQICQRPSHSALDCYNRMNYHYQGRHPPPQLAAMVASQNNSYLNMTNPSAIPFVLPWFVDFGCNAHVTADLGNLMVASEYNGEKHISVGSGQSLPITHTGSDTFPISSTSSLSLSNLLCATKLWGAFSSKDLIKNGLYPITPSVAPSMSTNSSISSPVAHIGVKSSSTLWHNQLGHPNSQVLHTVLRHLSLPICNNNRCVYEFCLSSKMHKLHFPKYTTFSMYPLELLHSDVYCMGSNS
Homology
BLAST of Lag0017659 vs. NCBI nr
Match:
XP_022150845.1 (uncharacterized protein LOC111018892 [Momordica charantia])
HSP 1 Score: 155.2 bits (391), Expect = 8.6e-34
Identity = 91/166 (54.82%), Postives = 109/166 (65.66%), Query Frame = 0
Query: 1 MFAAT-QPPSTRPAFNGGRGH--GHSRNNGRGR--FPPQNGND-RGRVP-NFTNSLSTDN 60
+FA++ Q + AF+ + H G +NNGRG+ F P N RGR NF S DN
Sbjct: 263 LFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADN 322
Query: 61 RPSCQICQRPSHSALDCYNRMNYHYQGRHPPPQLAAMVASQNNSYLNMTNPSAIPFVLPW 120
R CQIC + H+ALDCYNRMN+H+QGRHPPPQLAAMVA QNNSYL + N S W
Sbjct: 323 RSPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSP----TTW 382
Query: 121 FVDFGCNAHVTADLGNL---MVASEYNGEKHISVGSGQSLPITHTG 157
D CN H+TADL NL +AS+YNGE++ISVGSGQS PITH G
Sbjct: 383 LADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHFG 424
BLAST of Lag0017659 vs. NCBI nr
Match:
RVW87886.1 (Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera])
HSP 1 Score: 154.8 bits (390), Expect = 1.1e-33
Identity = 117/326 (35.89%), Postives = 162/326 (49.69%), Query Frame = 0
Query: 16 GGRGHGH--SRNNGRGRFP-----PQNGNDRGRVPNFTNSLS------TDNRPSCQICQR 75
G R H + SR++G +FP P + R +P+ S S + +R CQIC+R
Sbjct: 250 GPRSHNNNRSRSSGTSKFPGSVPVPSSSPFRQPLPHLPASSSPPVSHASRSRSPCQICKR 309
Query: 76 PSHSALDCYNRMNYHYQGRHPPPQLAAMVASQNNSYLNMTNPSAIPFVLPWFVDFGCNAH 135
+H ALDCYNRMNY +QGRHPP +LAAMVA N +YLN W+ D G N H
Sbjct: 310 ENHQALDCYNRMNYAFQGRHPPTELAAMVAEANTTYLNQHQ---------WYADSGANIH 369
Query: 136 VTADLGNLMVASEYNGEKHISVGSGQSLPITHTGSDTF---------------PISSTSS 195
VT+D NL ++ Y G + VG+G L I+ T + T P +S
Sbjct: 370 VTSDAANLAISQPYEGPDTVGVGNGAGLIISRTSTATIKTPSSTLALIDVAYCPQASAHL 429
Query: 196 LSLSNLLCAT-----KLWGA-FSSKDL----------IKNGLYPITPSVAPSMSTNSSIS 255
LS+ N C +L G+ FS KDL GLYPI ++S
Sbjct: 430 LSI-NKFCKDNNVLFELTGSDFSVKDLKTGETLMTGPSDRGLYPIN----LQQLSSSKFH 489
Query: 256 SPVAHIGVKSSSTLWHNQLGHPNSQVLHTVLRHLSLPICN--NNRCVYEFCLSSKMHKLH 296
+ +GVK+S+ WH +LGHP+S LH VL + SLP+ + + + + E C K +L
Sbjct: 490 AFSMIVGVKASTATWHCRLGHPSSSTLHHVLHNYSLPVSDSFHKKSICESCQLGKSKQLP 549
BLAST of Lag0017659 vs. NCBI nr
Match:
RVW77387.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 154.5 bits (389), Expect = 1.5e-33
Identity = 117/326 (35.89%), Postives = 161/326 (49.39%), Query Frame = 0
Query: 16 GGRGH--GHSRNNGRGRFP-----PQNGNDRGRVPNFTNSLS------TDNRPSCQICQR 75
G R H SR++G +FP P + R +P+ S S + +R CQIC+R
Sbjct: 250 GPRSHNINRSRSSGTSKFPGSVPVPSSSPFRQPLPHLPASSSPPVSHASRSRSPCQICKR 309
Query: 76 PSHSALDCYNRMNYHYQGRHPPPQLAAMVASQNNSYLNMTNPSAIPFVLPWFVDFGCNAH 135
+H ALDCYNRMNY +QGRHPP +LAAMVA N +YLN W+ D G N H
Sbjct: 310 ENHQALDCYNRMNYAFQGRHPPTELAAMVAEANTTYLNQHQ---------WYADSGANIH 369
Query: 136 VTADLGNLMVASEYNGEKHISVGSGQSLPITHTGSDTF---------------PISSTSS 195
VT+D NL ++ Y G + VG+G L I+ TG+ T P +S
Sbjct: 370 VTSDAANLAISQPYEGPDTVGVGNGAGLIISRTGTATIKTPSSTLALNDVAYCPQASAHL 429
Query: 196 LSLSNLLCAT-----KLWGA-FSSKDL----------IKNGLYPITPSVAPSMSTNSSIS 255
LS+ N C +L G+ FS KDL GLYPI ++S
Sbjct: 430 LSI-NKFCKDNNVLFELTGSDFSVKDLKTGKTLMTGPSDRGLYPIN----LQQLSSSKFH 489
Query: 256 SPVAHIGVKSSSTLWHNQLGHPNSQVLHTVLRHLSLPICN--NNRCVYEFCLSSKMHKLH 296
+ +GVK+S+ WH +LGHP+S LH VL + SLP+ + + + + E C K +L
Sbjct: 490 AFSMIVGVKASTATWHYRLGHPSSSTLHHVLHNYSLPVSDSFHKKSICESCQLGKSKQLP 549
BLAST of Lag0017659 vs. NCBI nr
Match:
KAF8394586.1 (hypothetical protein HHK36_020800 [Tetracentron sinense])
HSP 1 Score: 151.4 bits (381), Expect = 1.2e-32
Identity = 107/306 (34.97%), Postives = 148/306 (48.37%), Query Frame = 0
Query: 16 GGRGHGHSRNNGRGRFPPQNGNDRGRV-PNFTNSLSTDNRPSCQICQRPSHSALDCYNRM 75
G RG + R GRGR N GR P+ +S N PSCQIC R HSALDC++R+
Sbjct: 93 GSRGSSYFRGRGRGR------NHGGRANPSNNHSTKPSNAPSCQICNRVGHSALDCFHRL 152
Query: 76 NYHYQGRHPPPQLAAMVASQNNSYLNMTNPSAIPFVLPWFVDFGCNAHVTADLGNLMVAS 135
+ +QGR PPP+L AM A + +S WF D G HVTADL NL + S
Sbjct: 153 DLSFQGRQPPPKLQAMAAMRQDS--------------TWFTDTGATNHVTADLNNLSLHS 212
Query: 136 EYNGEKHISVGSGQSLPITHTGSDTFPISSTSSLSLSNLL---CATK------------- 195
+Y G +++VG+G+ L I H GS ++ S+ S+ + ++L C TK
Sbjct: 213 DYEGSDNLTVGNGKGLHIEHIGSTSYS-SNGSTFHMQDILHVPCITKNLLSVSQFSKDND 272
Query: 196 -----LWGAFSSKD----------LIKNGLYPITPSVAPSMSTNSSISSPVAHIGVKSSS 255
FS KD GLYP+ N SSP A SS
Sbjct: 273 CHFVFTSSGFSVKDNKSGKILFQGRSSKGLYPLH---FQPHDKNKPYSSPSAFTSSTVSS 332
Query: 256 TLWHNQLGHPNSQVLHTVLRHLSLPICNNNRCVYEFCLSSKMHKLHFPKYTTFSMYPLEL 290
++WH++LGHP+ Q L V H+ L + ++ + C K +L F + S YPLEL
Sbjct: 333 SVWHHRLGHPSHQTLQQVAPHIHLGRSSQHQTICSSCQMGKSSRLPFQLSDSISQYPLEL 374
BLAST of Lag0017659 vs. NCBI nr
Match:
KAB5527608.1 (hypothetical protein DKX38_021455 [Salix brachista])
HSP 1 Score: 150.2 bits (378), Expect = 2.8e-32
Identity = 88/231 (38.10%), Postives = 128/231 (55.41%), Query Frame = 0
Query: 53 NRPSCQICQRPSHSALDCYNRMNYHYQGRHPPPQLAAMVASQNNSYLNMTNPSAIPFVLP 112
+R CQIC+R H ALDC+NRMNY YQGRHPP +LAAMVA N +YLN
Sbjct: 295 SRSPCQICRREGHQALDCFNRMNYSYQGRHPPTELAAMVAEANTTYLNQNQ--------- 354
Query: 113 WFVDFGCNAHVTADLGNLMVASEYNGEKHISVGSGQSLPITHTGSDTFPISSTSSLSLSN 172
W+ D G N HVT+D+ NL + Y G++ + VG+G L I+HTG+ ++ +S L+L +
Sbjct: 355 WYADSGANIHVTSDVANLDNSQPYEGDESVGVGNGTGLNISHTGTAAI-LTPSSVLTLKD 414
Query: 173 LLCAT--------------------KLWGA-FSSKDLI----------KNGLYPITPSVA 232
++C +L G FS KD++ +NGLYPI
Sbjct: 415 VVCCPQASAQLLSINKFCKDNNVLFELTGTHFSVKDMLTGNTLLTGPSENGLYPIN---- 474
Query: 233 PSMSTNSSISSPVAHIGVKSSSTLWHNQLGHPNSQVLHTVLRHLSLPICNN 253
++S + +GVK+S+++WH +LGHP+++ L VL + SLP+ NN
Sbjct: 475 LRQLSSSKFQALTMTVGVKASTSIWHCRLGHPSAKTLSLVLSNFSLPLTNN 511
BLAST of Lag0017659 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 88.6 bits (218), Expect = 1.3e-16
Identity = 97/322 (30.12%), Postives = 138/322 (42.86%), Query Frame = 0
Query: 18 RGHGHSRN-NGRG---RFPPQNGNDRGRVPNFTNSLSTDNRPS-----CQICQRPSHSAL 77
R +RN N RG + N P+ + S S + +P CQIC HSA
Sbjct: 210 RNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAK 269
Query: 78 DC-----YNRMNYHYQGRHP--PPQLAAMVASQNNSYLNMTNPSAIPFVLPWFVDFGCNA 137
C + Q P P Q A +A NS N N W +D G
Sbjct: 270 RCPQLHQFQSTTNQQQSTSPFTPWQPRANLAV--NSPYNANN---------WLLDSGATH 329
Query: 138 HVTADLGNLMVASEYNGEKHISVGSGQSLPITHTGSDTFPISSTS-----SLSLSNL--- 197
H+T+D NL Y G + + G ++PITHTGS + P SS S L + N+
Sbjct: 330 HITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKN 389
Query: 198 ------LCATK------LWGAFSSKDL----------IKNGLY--PITPSVAPSMSTNSS 257
LC T +F KDL K+ LY PI S A SM
Sbjct: 390 LISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSM----- 449
Query: 258 ISSPVAHIGVKSSSTLWHNQLGHPNSQVLHTVLRHLSLPICNNNRCVYEF--CLSSKMHK 290
+SP + K++ + WH++LGHP+ +L++V+ + SLP+ N + + C +K HK
Sbjct: 450 FASPCS----KATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHK 509
BLAST of Lag0017659 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 77.4 bits (189), Expect = 3.0e-13
Identity = 81/310 (26.13%), Postives = 127/310 (40.97%), Query Frame = 0
Query: 15 NGGRGHGHSRNNGRGRFPPQNGNDRGRVPNFTNSLSTDNRPSCQICQRPSHSALDCYNRM 74
NG R + + N P + PN N+ S CQIC HSA C
Sbjct: 239 NGNRNNRYDNRNNNNNSKPWQQSSTNFHPN--NNQSKPYLGKCQICGVQGHSAKRCSQLQ 298
Query: 75 NY--HYQGRHPPPQLAAMVASQNNSYLNMTNPSAIPFVLPWFVDFGCNAHVTADLGNLMV 134
++ + PP + Q + L + +P + W +D G H+T+D NL +
Sbjct: 299 HFLSSVNSQQPP---SPFTPWQPRANLALGSPYSSN---NWLLDSGATHHITSDFNNLSL 358
Query: 135 ASEYNGEKHISVGSGQSLPITHTGSDTFPISSTSSLSLSNLLCATKLW------------ 194
Y G + V G ++PI+HTGS + S L+L N+L +
Sbjct: 359 HQPYTGGDDVMVADGSTIPISHTGSTSLSTKS-RPLNLHNILYVPNIHKNLISVYRLCNA 418
Query: 195 ---------GAFSSKDL----------IKNGLYPITPSVAPSMSTNSSISSPVAHIGVKS 254
+F KDL K+ LY + + +S +S SS H
Sbjct: 419 NGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATH----- 478
Query: 255 SSTLWHNQLGHPNSQVLHTVLRHLSLPICNNNRCVYEF--CLSSKMHKLHFPKYTTFSMY 290
+ WH +LGHP +L++V+ + SL + N + CL +K +K+ F + T S
Sbjct: 479 --SSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTR 532
BLAST of Lag0017659 vs. ExPASy TrEMBL
Match:
A0A2N9E6N0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2498 PE=4 SV=1)
HSP 1 Score: 164.1 bits (414), Expect = 9.0e-37
Identity = 119/316 (37.66%), Postives = 166/316 (52.53%), Query Frame = 0
Query: 16 GGRGHGH---SRNNGRGRFPPQN----GNDRGRVPNFTNSLSTDNRPSCQICQRPSHSAL 75
GGRG+ RN+ RG F + N G PN+ NS T RP CQIC + H AL
Sbjct: 661 GGRGNNRGRGGRNSNRGGFSSNSQGFASNPLGFSPNY-NSSGTSQRPQCQICGKTGHLAL 720
Query: 76 DCYNRMNYHYQGRHPPPQLAAMVASQNNSYLN--MTNPSAIPFVLPWFVDFGCNAHVTAD 135
DC++RMN+ YQGR PP +LAA+ ++ +S +N +N S+ W D G H T D
Sbjct: 721 DCFHRMNFAYQGRQPPAKLAAIASTAMSSAINAPYSNQSS------WISDTGATDHFTPD 780
Query: 136 LGNLMVASEYNGEKHISVGSGQSLPITHTGSDTFPISS----------TSSLSLSNLLCA 195
+ ++ +Y G ++VG+GQSLPITHTG+ SS S+S SNLL
Sbjct: 781 ISHIPDCHDYRGTDQVTVGNGQSLPITHTGNSQLYASSHLFKLRKILHVPSMS-SNLLSV 840
Query: 196 TKLW-----------GAFSSKDL----------IKNGLYPITPSVAPSMSTNSSISSPVA 255
+ F KDL ++GLYPI ++ P+ S +S
Sbjct: 841 HRFCKDNNASFYFDASKFRIKDLSSGRLLYNGPSEHGLYPIHGAILPASSPKLFHTS--- 900
Query: 256 HIGVKSSSTLWHNQLGHPNSQVLHTVLRH-LSLPICN-NNRCVYEFCLSSKMHKLHFPKY 290
V SSS LWHN+LGHP V+ VL++ L LP+ N + C++ CL KMHKL FP +
Sbjct: 901 --AVSSSSQLWHNRLGHPQQSVVKHVLQNKLRLPVSNTTSLCIH--CLEGKMHKLPFPNF 960
BLAST of Lag0017659 vs. ExPASy TrEMBL
Match:
A0A2N9FKJ8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15492 PE=4 SV=1)
HSP 1 Score: 163.7 bits (413), Expect = 1.2e-36
Identity = 119/315 (37.78%), Postives = 166/315 (52.70%), Query Frame = 0
Query: 1 MFAATQPP----STRPAF--NGGRGHGHSRNN---GRGRFPPQNGNDRGRVPNFTNSLST 60
MFA+ P +++ +F N + G RNN GRGRF N + PN ++S +
Sbjct: 206 MFASAAPNNRNFNSQSSFYVNSSQARGRGRNNSQRGRGRFNHNNQYSQPNAPNQSHSQYS 265
Query: 61 D--------NRPSCQICQRPSHSALDCYNRMNYHYQGRHPPPQLAAMVASQNNSYLNMTN 120
+RP CQIC + H ALDCY+RM++ YQGRHPP +LAAM ++ NNS T
Sbjct: 266 QQAQNKPDGSRPQCQICGKLGHQALDCYHRMDFAYQGRHPPAKLAAMASTSNNSQGGET- 325
Query: 121 PSAIPFVLPWFVDFGCNAHVTADLGNLMVASEYNGEKHISVGSGQSLPITHTGSDTFPIS 180
W D G H+TA+L NL V + Y G ++VG+GQS+PI +TG + +
Sbjct: 326 ---------WLTDTGATDHLTANLNNLTVQNPYKGSDQVAVGNGQSIPINNTG-NVHKLC 385
Query: 181 STSSLSL----SNLLCATKLWGAFSSKDLIKNGLYPITPSVAPSMSTNS--SISSPVAHI 240
+ ++ S + L G K L +NGLYPI S+ST S + SS A +
Sbjct: 386 TDNNCSCYFDSNKFLIQDLPSGKVLYKGLSRNGLYPIHTHPPSSVSTPSVTASSSVSAFL 445
Query: 241 GVKSSSTLWHNQLGHPNSQVLHTVLRHLSLPICNNNRCVY---EFCLSSKMHKLHFPKYT 290
K+ LWH +LGHP+ +VL + L LS + + N+ V + CL KMHKL F
Sbjct: 446 SSKNKWQLWHQRLGHPSDRVLVSSLPSLSSCMSDRNKHVQHHCKHCLIGKMHKLPFVHSQ 505
BLAST of Lag0017659 vs. ExPASy TrEMBL
Match:
A0A2N9HKM9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40116 PE=4 SV=1)
HSP 1 Score: 162.2 bits (409), Expect = 3.4e-36
Identity = 119/316 (37.66%), Postives = 165/316 (52.22%), Query Frame = 0
Query: 16 GGRGHGH---SRNNGRGRFPPQN----GNDRGRVPNFTNSLSTDNRPSCQICQRPSHSAL 75
GGRG+ RN+ RG F + N G PN+ NS T RP CQIC + H AL
Sbjct: 254 GGRGNNRGRGGRNSNRGGFSSNSQGFASNPLGFSPNY-NSSGTSQRPQCQICGKTGHLAL 313
Query: 76 DCYNRMNYHYQGRHPPPQLAAMVASQNNSYLN--MTNPSAIPFVLPWFVDFGCNAHVTAD 135
DC++RMN+ YQGR PP +LAA+ ++ +S +N +N S+ W D G H T D
Sbjct: 314 DCFHRMNFAYQGRQPPAKLAAIASTAMSSAINAPYSNQSS------WISDTGATDHFTPD 373
Query: 136 LGNLMVASEYNGEKHISVGSGQSLPITHTGSDTFPISS----------TSSLSLSNLLCA 195
+ ++ +Y G ++VG+GQSLPITHTG+ SS S+S SNLL
Sbjct: 374 ISHIPDCHDYRGTDQVTVGNGQSLPITHTGNSQLYASSHLFKLRKILHVPSMS-SNLLSV 433
Query: 196 TKLW-----------GAFSSKDL----------IKNGLYPITPSVAPSMSTNSSISSPVA 255
+ F KDL ++GLYPI ++ P+ S +S
Sbjct: 434 HRFCKDNNASFYFDASKFRIKDLSSGRLLYNGPSEHGLYPIHGAILPASSPKLFHTS--- 493
Query: 256 HIGVKSSSTLWHNQLGHPNSQVLHTVLRH-LSLPICN-NNRCVYEFCLSSKMHKLHFPKY 290
V SSS LWHN+LGHP V+ VL++ L LP+ N + C++ CL KMHKL FP
Sbjct: 494 --AVSSSSQLWHNRLGHPQQSVVKHVLQNKLRLPVSNTTSLCIH--CLEGKMHKLPFPNS 553
BLAST of Lag0017659 vs. ExPASy TrEMBL
Match:
A0A2N9EJ78 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2556 PE=4 SV=1)
HSP 1 Score: 161.4 bits (407), Expect = 5.8e-36
Identity = 118/326 (36.20%), Postives = 175/326 (53.68%), Query Frame = 0
Query: 4 ATQPPS--TRPAFN-GGRGHGHSRNNGRGRFPPQNGNDRGRV--PNFTNSLSTDN--RPS 63
+ +PP+ RP F + +G R G R PQ + + P + +S + N RPS
Sbjct: 223 SNKPPNQDRRPRFPIPSKPNGSPRYQGPHRTSPQISHQKPSTNPPKYRSSPAPFNSTRPS 282
Query: 64 CQICQRPSHSALDCYNRMNYHYQGRHPPPQLAAMVASQNNSYLNMTNPSAIPFVLPWFVD 123
CQIC + +H ALDCY+RM+Y YQGRHPP QLAAMVA N + N PW+ D
Sbjct: 283 CQICGKNNHQALDCYHRMDYSYQGRHPPSQLAAMVAQTNAQFSNEEQ--------PWYAD 342
Query: 124 FGCNAHVTADLGNLMVASE-YNGEKHISVGSGQSLPITHTGSDTFPISST---------- 183
G N H+TADL NL + E Y GE +++VG+G +L I + GS + +++
Sbjct: 343 SGANQHITADLENLNITQEPYQGETNVAVGNGSTLQIANMGSTSLTANNSTFKLKHVLHC 402
Query: 184 -----SSLSLSNLL----CATKLW-GAFSSKDL----------IKNGLYPI-TPSVAPSM 243
+ LS+ N C +L +F KD+ K+GLYPI ++P
Sbjct: 403 PNVPINLLSIQNFCADNHCLFELTASSFLVKDIRTGQTLLHGHSKDGLYPIPLHRLSP-- 462
Query: 244 STNSSISSPVAHIGVKSSSTLWHNQLGHPNSQVLHTVLRHLSLPICNNNRCVY-EFCLSS 290
S IS+ A +G+++S+ +WH++LGHP ++H V+ H LPI ++N + E C +
Sbjct: 463 ---SPISNFTAFVGLQASTKVWHHRLGHPAMPLVHRVIHHHKLPISSSNDSTFCEPCQMA 522
BLAST of Lag0017659 vs. ExPASy TrEMBL
Match:
A0A2N9I1S1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45683 PE=4 SV=1)
HSP 1 Score: 157.9 bits (398), Expect = 6.4e-35
Identity = 129/356 (36.24%), Postives = 173/356 (48.60%), Query Frame = 0
Query: 1 MFAATQPP----STRPAF--NGGRGHGHSRNN---GRGRF-----------PPQNGNDRG 60
MFA+ P S++ +F N + G RNN GRGRF P QN +
Sbjct: 245 MFASAAPNNRNFSSQSSFYVNNSQARGRGRNNSHRGRGRFNHNHQYAQSTAPNQNHSQYS 304
Query: 61 RVPNFTNSLSTD---------NRPSCQICQRPSHSALDCYNRMNYHYQGRHPPPQLAAMV 120
+ + S + + +RP CQIC + H ALDCY+RM++ YQGRHPP +LAAM
Sbjct: 305 QHNQYAQSTAPNQQALNKPDGSRPQCQICGKLGHQALDCYHRMDFAYQGRHPPAKLAAMA 364
Query: 121 ASQNNSYLNMTNPSAIPFVLPWFVDFGCNAHVTADLGNLMVASEYNGEKHISVGSGQSLP 180
++ NNS T W D G H+TA+L NL V Y G ++VG+GQS+P
Sbjct: 365 STSNNSQGGET----------WLTDTGATDHLTANLNNLTVQDPYKGSDQVAVGNGQSIP 424
Query: 181 ITHTGSD-------TFPISST--SSLSLSNLLCATKLW---------------------G 240
I HTG+ F + + SS SNLL KL G
Sbjct: 425 INHTGNGQLCTKFYNFRLHNLLHSSKISSNLLSVHKLCTDNNCSCYFDSNKFLIQDLPSG 484
Query: 241 AFSSKDLIKNGLYPI---TPSVA--PSMSTNSSISSPVAHIGVKSSSTLWHNQLGHPNSQ 290
K L +NGLYPI PS PS++ +SS+S A + K+ LWH +LGHP+ +
Sbjct: 485 KVLYKGLSRNGLYPIHTHPPSSVSPPSVTASSSVS---AFLSSKNKWQLWHQRLGHPSDR 544
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022150845.1 | 8.6e-34 | 54.82 | uncharacterized protein LOC111018892 [Momordica charantia] | [more] |
RVW87886.1 | 1.1e-33 | 35.89 | Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera] | [more] |
RVW77387.1 | 1.5e-33 | 35.89 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
KAF8394586.1 | 1.2e-32 | 34.97 | hypothetical protein HHK36_020800 [Tetracentron sinense] | [more] |
KAB5527608.1 | 2.8e-32 | 38.10 | hypothetical protein DKX38_021455 [Salix brachista] | [more] |
Match Name | E-value | Identity | Description | |
Q9ZT94 | 1.3e-16 | 30.12 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 3.0e-13 | 26.13 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A2N9E6N0 | 9.0e-37 | 37.66 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2498 PE=4 SV=1 | [more] |
A0A2N9FKJ8 | 1.2e-36 | 37.78 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15492 PE=4 SV=1 | [more] |
A0A2N9HKM9 | 3.4e-36 | 37.66 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40116 PE=4 SV=1 | [more] |
A0A2N9EJ78 | 5.8e-36 | 36.20 | Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... | [more] |
A0A2N9I1S1 | 6.4e-35 | 36.24 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45683 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |