Lag0017658 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017658
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrotran_gag_3 domain-containing protein
Location	chr5: 6455537 .. 6456212 (+)
RNA-Seq Expression	Lag0017658
Synteny	Lag0017658

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCTTCACGCCTACTACTGAGAAGGACCTTCACTCTCCAAGTTTTTTGTTGTCTAATATTTGTAATCTGGTTTCTATCCGATTGGATTATTCTTCAAATTTTATTCTCTGGAAATTTCAGCTTACATCGATTCTTAAGGCTCATAAGCTCTTCGGCTTCATTGATGGTTCCATTCTACAGCCTGCTGAATTTCTTTCTTTGGTTGTTGCAACTTCTTCAACCACTGAGAATCCTACTAATTCAACATCGTCTGCCTCTGAAGCAGCTACTCTTGTGATCAATCCGAAGCATGGTGATTGGATTGCAAAAGATCAAGCCCTAATAACGCTTATCAACGCTACCTTGTCTCCTGAAGCTCTTGCTTATGCGTTGTCAGCAACACTACCTCTAAGTAAAAATGTGGGAGGTACTTGAAAAACACTATACCTCAAGCTCTCGTACTAATGTAGTCAATTTGAAATCTGATTTGCAGTCCATTTCGAAGAAAGTGGATGAATCTATCGAGGCTTATGTCAAGAGGATCAATGAAATCAAAGACAAGTTAGCCAATGTCTCCATTATGGTCAATGATGAGGATCTTCTGATCTGTACATTGAATGGGTTAACAATCGACTACAACAACATTTTGTACTTCGATGCGCACTCGAACACAATCAGTTTCTTTTGCTGA

mRNA sequence

ATGGATTCCTTCACGCCTACTACTGAGAAGGACCTTCACTCTCCAAGTTTTTTGTTGTCTAATATTTGTAATCTGGTTTCTATCCGATTGGATTATTCTTCAAATTTTATTCTCTGGAAATTTCAGCTTACATCGATTCTTAAGGCTCATAAGCTCTTCGGCTTCATTGATGGTTCCATTCTACAGCCTGCTGAATTTCTTTCTTTGGTTGTTGCAACTTCTTCAACCACTGAGAATCCTACTAATTCAACATCGTCTGCCTCTGAAGCAGCTACTCTTGTGATCAATCCGAAGCATGGTGATTGGATTGCAAAAGATCAAGCCCTAATAACGCTTATCAACGCTACCTTGTCTCCTGAAGCTCTTGCTTATGCGTTGTCAGCAACACTACCTCTAAGTAAAAATGTGGGAGTCAATTTGAAATCTGATTTGCAGTCCATTTCGAAGAAAGTGGATGAATCTATCGAGGCTTATGTCAAGAGGATCAATGAAATCAAAGACAAGTTAGCCAATGTCTCCATTATGGTCAATGATGAGGATCTTCTGATCTGTACATTGAATGGGTTAACAATCGACTACAACAACATTTTGTACTTCGATGCGCACTCGAACACAATCAGTTTCTTTTGCTGA

Coding sequence (CDS)

ATGGATTCCTTCACGCCTACTACTGAGAAGGACCTTCACTCTCCAAGTTTTTTGTTGTCTAATATTTGTAATCTGGTTTCTATCCGATTGGATTATTCTTCAAATTTTATTCTCTGGAAATTTCAGCTTACATCGATTCTTAAGGCTCATAAGCTCTTCGGCTTCATTGATGGTTCCATTCTACAGCCTGCTGAATTTCTTTCTTTGGTTGTTGCAACTTCTTCAACCACTGAGAATCCTACTAATTCAACATCGTCTGCCTCTGAAGCAGCTACTCTTGTGATCAATCCGAAGCATGGTGATTGGATTGCAAAAGATCAAGCCCTAATAACGCTTATCAACGCTACCTTGTCTCCTGAAGCTCTTGCTTATGCGTTGTCAGCAACACTACCTCTAAGTAAAAATGTGGGAGTCAATTTGAAATCTGATTTGCAGTCCATTTCGAAGAAAGTGGATGAATCTATCGAGGCTTATGTCAAGAGGATCAATGAAATCAAAGACAAGTTAGCCAATGTCTCCATTATGGTCAATGATGAGGATCTTCTGATCTGTACATTGAATGGGTTAACAATCGACTACAACAACATTTTGTACTTCGATGCGCACTCGAACACAATCAGTTTCTTTTGCTGA

Protein sequence

MDSFTPTTEKDLHSPSFLLSNICNLVSIRLDYSSNFILWKFQLTSILKAHKLFGFIDGSILQPAEFLSLVVATSSTTENPTNSTSSASEAATLVINPKHGDWIAKDQALITLINATLSPEALAYALSATLPLSKNVGVNLKSDLQSISKKVDESIEAYVKRINEIKDKLANVSIMVNDEDLLICTLNGLTIDYNNILYFDAHSNTISFFC

Homology

[Close]

BLAST of Lag0017658 vs. NCBI nr
Match: XP_022150845.1 (uncharacterized protein LOC111018892 [Momordica charantia])

HSP 1 Score: 211.1 bits (536), Expect = 9.4e-51
Identity = 128/209 (61.24%), Postives = 150/209 (71.77%), Query Frame = 0


Query: 1   MDSFTPTTEKDLHSPSFLLSNICNLVSIRLDYSSNFILWKFQLTSILKAHKLFGFIDGSI 60
           M S +  T+KDLHSP FLLSNICNLVSIRLD S++FILWKFQLT+ILKAHKLFGFIDGS+
Sbjct: 22  MTSSSTNTKKDLHSPIFLLSNICNLVSIRLD-STDFILWKFQLTAILKAHKLFGFIDGSV 81

Query: 61  LQPAEFLSLVVATSSTTENPTNSTSSASEAATLVINPKHGDWIAKDQALITLINATLSPE 120
             P++FL    A+SS TE+   +T+S       VINP   DWIAKDQAL+TLINATLS E
Sbjct: 82  SAPSQFL----ASSSETESQPTTTTSLP-----VINPHFEDWIAKDQALMTLINATLSAE 141

Query: 121 ALAYALSATLPL-------------SKNVGVNLKSDLQSISKKVDESIEAYVKRINEIKD 180
           ALAY + +                 S+   VNLKSDLQSI KK +ESI+AYVKRI EIKD
Sbjct: 142 ALAYVVRSGTSKQVWEVLEKHYSSNSRTNVVNLKSDLQSIVKKTEESIDAYVKRIKEIKD 201

Query: 181 KLANVSIMVNDEDLLICTLNGLTIDYNNI 197
           K ANVSI +NDE LLI  LNGL+ +YN +
Sbjct: 202 KFANVSITINDEYLLIYALNGLSTEYNTL 220

[Close]

BLAST of Lag0017658 vs. NCBI nr
Match: XP_008448007.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 6.5e-44
Identity = 112/201 (55.72%), Postives = 136/201 (67.66%), Query Frame = 0


Query: 7   TTEKDLHSPSFLLSNICNLVSIRLDYSSNFILWKFQLTSILKAHKLFGFIDGSILQPAEF 66
           + EKD  SP FLLSNICNL+S+RLD S+NF+LWKFQLT+ILKAHKL+GFIDG+   P   
Sbjct: 11  SAEKDSLSPIFLLSNICNLISMRLD-STNFVLWKFQLTAILKAHKLYGFIDGTNPCP--- 70

Query: 67  LSLVVATSSTTENPTNSTSSASEAATLVINPKHGDWIAKDQALITLINATLSPEALAYAL 126
                        P  + SS++       NP + DWIAKDQAL+T+INATLSPEALAY +
Sbjct: 71  -------------PRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVV 130

Query: 127 SATLPL-------------SKNVGVNLKSDLQSISKKVDESIEAYVKRINEIKDKLANVS 186
            +T                S++  VNLKSDLQ+I KK DESI+AY+KRI EIKDKLANVS
Sbjct: 131 GSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVS 190

Query: 187 IMVNDEDLLICTLNGLTIDYN 195
             +N+EDLLI  LNGL  +YN
Sbjct: 191 TFINEEDLLIYALNGLPNEYN 194

[Close]

BLAST of Lag0017658 vs. NCBI nr
Match: XP_008448008.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 6.5e-44
Identity = 112/201 (55.72%), Postives = 136/201 (67.66%), Query Frame = 0


Query: 7   TTEKDLHSPSFLLSNICNLVSIRLDYSSNFILWKFQLTSILKAHKLFGFIDGSILQPAEF 66
           + EKD  SP FLLSNICNL+S+RLD S+NF+LWKFQLT+ILKAHKL+GFIDG+   P   
Sbjct: 11  SAEKDSLSPIFLLSNICNLISMRLD-STNFVLWKFQLTAILKAHKLYGFIDGTNPCP--- 70

Query: 67  LSLVVATSSTTENPTNSTSSASEAATLVINPKHGDWIAKDQALITLINATLSPEALAYAL 126
                        P  + SS++       NP + DWIAKDQAL+T+INATLSPEALAY +
Sbjct: 71  -------------PRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVV 130

Query: 127 SATLPL-------------SKNVGVNLKSDLQSISKKVDESIEAYVKRINEIKDKLANVS 186
            +T                S++  VNLKSDLQ+I KK DESI+AY+KRI EIKDKLANVS
Sbjct: 131 GSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVS 190

Query: 187 IMVNDEDLLICTLNGLTIDYN 195
             +N+EDLLI  LNGL  +YN
Sbjct: 191 TFINEEDLLIYALNGLPNEYN 194

[Close]

BLAST of Lag0017658 vs. NCBI nr
Match: KAA0049700.1 (T4.5 [Cucumis melo var. makuwa] >TYK12172.1 T4.5 [Cucumis melo var. makuwa])

HSP 1 Score: 188.3 bits (477), Expect = 6.5e-44
Identity = 112/201 (55.72%), Postives = 136/201 (67.66%), Query Frame = 0


Query: 7   TTEKDLHSPSFLLSNICNLVSIRLDYSSNFILWKFQLTSILKAHKLFGFIDGSILQPAEF 66
           + EKD  SP FLLSNICNL+S+RLD S+NF+LWKFQLT+ILKAHKL+GFIDG+   P   
Sbjct: 11  SAEKDSLSPIFLLSNICNLISMRLD-STNFVLWKFQLTAILKAHKLYGFIDGTNPCP--- 70

Query: 67  LSLVVATSSTTENPTNSTSSASEAATLVINPKHGDWIAKDQALITLINATLSPEALAYAL 126
                        P  + SS++       NP + DWIAKDQAL+T+INATLSPEALAY +
Sbjct: 71  -------------PRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVV 130

Query: 127 SATLPL-------------SKNVGVNLKSDLQSISKKVDESIEAYVKRINEIKDKLANVS 186
            +T                S++  VNLKSDLQ+I KK DESI+AY+KRI EIKDKLANVS
Sbjct: 131 GSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVS 190

Query: 187 IMVNDEDLLICTLNGLTIDYN 195
             +N+EDLLI  LNGL  +YN
Sbjct: 191 TFINEEDLLIYALNGLPNEYN 194

[Close]

BLAST of Lag0017658 vs. NCBI nr
Match: XP_016900446.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 6.5e-44
Identity = 112/201 (55.72%), Postives = 136/201 (67.66%), Query Frame = 0


Query: 7   TTEKDLHSPSFLLSNICNLVSIRLDYSSNFILWKFQLTSILKAHKLFGFIDGSILQPAEF 66
           + EKD  SP FLLSNICNL+S+RLD S+NF+LWKFQLT+ILKAHKL+GFIDG+   P   
Sbjct: 11  SAEKDSLSPIFLLSNICNLISMRLD-STNFVLWKFQLTAILKAHKLYGFIDGTNPCP--- 70

Query: 67  LSLVVATSSTTENPTNSTSSASEAATLVINPKHGDWIAKDQALITLINATLSPEALAYAL 126
                        P  + SS++       NP + DWIAKDQAL+T+INATLSPEALAY +
Sbjct: 71  -------------PRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVV 130

Query: 127 SATLPL-------------SKNVGVNLKSDLQSISKKVDESIEAYVKRINEIKDKLANVS 186
            +T                S++  VNLKSDLQ+I KK DESI+AY+KRI EIKDKLANVS
Sbjct: 131 GSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVS 190

Query: 187 IMVNDEDLLICTLNGLTIDYN 195
             +N+EDLLI  LNGL  +YN
Sbjct: 191 TFINEEDLLIYALNGLPNEYN 194

[Close]

BLAST of Lag0017658 vs. ExPASy TrEMBL
Match: A0A6J1D9L6 (uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018892 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 4.6e-51
Identity = 128/209 (61.24%), Postives = 150/209 (71.77%), Query Frame = 0


Query: 1   MDSFTPTTEKDLHSPSFLLSNICNLVSIRLDYSSNFILWKFQLTSILKAHKLFGFIDGSI 60
           M S +  T+KDLHSP FLLSNICNLVSIRLD S++FILWKFQLT+ILKAHKLFGFIDGS+
Sbjct: 22  MTSSSTNTKKDLHSPIFLLSNICNLVSIRLD-STDFILWKFQLTAILKAHKLFGFIDGSV 81

Query: 61  LQPAEFLSLVVATSSTTENPTNSTSSASEAATLVINPKHGDWIAKDQALITLINATLSPE 120
             P++FL    A+SS TE+   +T+S       VINP   DWIAKDQAL+TLINATLS E
Sbjct: 82  SAPSQFL----ASSSETESQPTTTTSLP-----VINPHFEDWIAKDQALMTLINATLSAE 141

Query: 121 ALAYALSATLPL-------------SKNVGVNLKSDLQSISKKVDESIEAYVKRINEIKD 180
           ALAY + +                 S+   VNLKSDLQSI KK +ESI+AYVKRI EIKD
Sbjct: 142 ALAYVVRSGTSKQVWEVLEKHYSSNSRTNVVNLKSDLQSIVKKTEESIDAYVKRIKEIKD 201

Query: 181 KLANVSIMVNDEDLLICTLNGLTIDYNNI 197
           K ANVSI +NDE LLI  LNGL+ +YN +
Sbjct: 202 KFANVSITINDEYLLIYALNGLSTEYNTL 220

[Close]

BLAST of Lag0017658 vs. ExPASy TrEMBL
Match: A0A5D3CLI6 (T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 3.2e-44
Identity = 112/201 (55.72%), Postives = 136/201 (67.66%), Query Frame = 0


Query: 7   TTEKDLHSPSFLLSNICNLVSIRLDYSSNFILWKFQLTSILKAHKLFGFIDGSILQPAEF 66
           + EKD  SP FLLSNICNL+S+RLD S+NF+LWKFQLT+ILKAHKL+GFIDG+   P   
Sbjct: 11  SAEKDSLSPIFLLSNICNLISMRLD-STNFVLWKFQLTAILKAHKLYGFIDGTNPCP--- 70

Query: 67  LSLVVATSSTTENPTNSTSSASEAATLVINPKHGDWIAKDQALITLINATLSPEALAYAL 126
                        P  + SS++       NP + DWIAKDQAL+T+INATLSPEALAY +
Sbjct: 71  -------------PRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVV 130

Query: 127 SATLPL-------------SKNVGVNLKSDLQSISKKVDESIEAYVKRINEIKDKLANVS 186
            +T                S++  VNLKSDLQ+I KK DESI+AY+KRI EIKDKLANVS
Sbjct: 131 GSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVS 190

Query: 187 IMVNDEDLLICTLNGLTIDYN 195
             +N+EDLLI  LNGL  +YN
Sbjct: 191 TFINEEDLLIYALNGLPNEYN 194

[Close]

BLAST of Lag0017658 vs. ExPASy TrEMBL
Match: A0A1S3BI58 (uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 3.2e-44
Identity = 112/201 (55.72%), Postives = 136/201 (67.66%), Query Frame = 0


Query: 7   TTEKDLHSPSFLLSNICNLVSIRLDYSSNFILWKFQLTSILKAHKLFGFIDGSILQPAEF 66
           + EKD  SP FLLSNICNL+S+RLD S+NF+LWKFQLT+ILKAHKL+GFIDG+   P   
Sbjct: 11  SAEKDSLSPIFLLSNICNLISMRLD-STNFVLWKFQLTAILKAHKLYGFIDGTNPCP--- 70

Query: 67  LSLVVATSSTTENPTNSTSSASEAATLVINPKHGDWIAKDQALITLINATLSPEALAYAL 126
                        P  + SS++       NP + DWIAKDQAL+T+INATLSPEALAY +
Sbjct: 71  -------------PRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVV 130

Query: 127 SATLPL-------------SKNVGVNLKSDLQSISKKVDESIEAYVKRINEIKDKLANVS 186
            +T                S++  VNLKSDLQ+I KK DESI+AY+KRI EIKDKLANVS
Sbjct: 131 GSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVS 190

Query: 187 IMVNDEDLLICTLNGLTIDYN 195
             +N+EDLLI  LNGL  +YN
Sbjct: 191 TFINEEDLLIYALNGLPNEYN 194

[Close]

BLAST of Lag0017658 vs. ExPASy TrEMBL
Match: A0A1S4DWT9 (uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 3.2e-44
Identity = 112/201 (55.72%), Postives = 136/201 (67.66%), Query Frame = 0


Query: 7   TTEKDLHSPSFLLSNICNLVSIRLDYSSNFILWKFQLTSILKAHKLFGFIDGSILQPAEF 66
           + EKD  SP FLLSNICNL+S+RLD S+NF+LWKFQLT+ILKAHKL+GFIDG+   P   
Sbjct: 11  SAEKDSLSPIFLLSNICNLISMRLD-STNFVLWKFQLTAILKAHKLYGFIDGTNPCP--- 70

Query: 67  LSLVVATSSTTENPTNSTSSASEAATLVINPKHGDWIAKDQALITLINATLSPEALAYAL 126
                        P  + SS++       NP + DWIAKDQAL+T+INATLSPEALAY +
Sbjct: 71  -------------PRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVV 130

Query: 127 SATLPL-------------SKNVGVNLKSDLQSISKKVDESIEAYVKRINEIKDKLANVS 186
            +T                S++  VNLKSDLQ+I KK DESI+AY+KRI EIKDKLANVS
Sbjct: 131 GSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVS 190

Query: 187 IMVNDEDLLICTLNGLTIDYN 195
             +N+EDLLI  LNGL  +YN
Sbjct: 191 TFINEEDLLIYALNGLPNEYN 194

[Close]

BLAST of Lag0017658 vs. ExPASy TrEMBL
Match: A0A1S3BIR3 (uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 3.2e-44
Identity = 112/201 (55.72%), Postives = 136/201 (67.66%), Query Frame = 0


Query: 7   TTEKDLHSPSFLLSNICNLVSIRLDYSSNFILWKFQLTSILKAHKLFGFIDGSILQPAEF 66
           + EKD  SP FLLSNICNL+S+RLD S+NF+LWKFQLT+ILKAHKL+GFIDG+   P   
Sbjct: 11  SAEKDSLSPIFLLSNICNLISMRLD-STNFVLWKFQLTAILKAHKLYGFIDGTNPCP--- 70

Query: 67  LSLVVATSSTTENPTNSTSSASEAATLVINPKHGDWIAKDQALITLINATLSPEALAYAL 126
                        P  + SS++       NP + DWIAKDQAL+T+INATLSPEALAY +
Sbjct: 71  -------------PRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVV 130

Query: 127 SATLPL-------------SKNVGVNLKSDLQSISKKVDESIEAYVKRINEIKDKLANVS 186
            +T                S++  VNLKSDLQ+I KK DESI+AY+KRI EIKDKLANVS
Sbjct: 131 GSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVS 190

Query: 187 IMVNDEDLLICTLNGLTIDYN 195
             +N+EDLLI  LNGL  +YN
Sbjct: 191 TFINEEDLLIYALNGLPNEYN 194

The following BLAST results are available for this feature:

BLAST of Lag0017658 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150845.1	9.4e-51	61.24	uncharacterized protein LOC111018892 [Momordica charantia]	[more]
XP_008448007.1	6.5e-44	55.72	PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]	[more]
XP_008448008.1	6.5e-44	55.72	PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]	[more]
KAA0049700.1	6.5e-44	55.72	T4.5 [Cucumis melo var. makuwa] >TYK12172.1 T4.5 [Cucumis melo var. makuwa]	[more]
XP_016900446.1	6.5e-44	55.72	PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo]	[more]

BLAST of Lag0017658 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0017658 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9L6	4.6e-51	61.24	uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A5D3CLI6	3.2e-44	55.72	T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=...	[more]
A0A1S3BI58	3.2e-44	55.72	uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DWT9	3.2e-44	55.72	uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BIR3	3.2e-44	55.72	uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Lag0017658 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029472	Retrotransposon Copia-like, N-terminal	PFAM	PF14244	Retrotran_gag_3	coord: 24..64 e-value: 4.8E-8 score: 32.7
None	No IPR available	PANTHER	PTHR47481	FAMILY NOT NAMED	coord: 18..195
None	No IPR available	PANTHER	PTHR47481:SF3	GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATED	coord: 18..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017658.1	Lag0017658.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding