Lag0017611 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017611
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	ycf49-like protein
Location	chr5: 5950894 .. 5954454 (-)
RNA-Seq Expression	Lag0017611
Synteny	Lag0017611

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATGTCGCTCACCTCCACCTTGTCATATTCCTTCTCTAATCCCAAATCGCCCATTTCCTCGTCTTCTTCTTCTTCCCCCTCGCTGCCCAGGTCCAGAGATTTTGCCGCTCCGACGGGAACCCAACTCCGGAGGATTATCGGTTCCGGTCTGGCTTTGCACTCGAAAACCATGGTGGTTTTGCTCGGCACGGGCTTCACTCTTGCCCTTCTGGGACCTGAATCGGCTTCTGCTGCGGCGGAATTGCAGTCTTCGCTGCAATTTAACGAGCCCCAGAATGCTCTCTCCTTGCCCACCTGGGCCATTCATGTTTCCAGTGTTGTTGAGTGGTGAGGATTTATGAATCTTGTTCTCTTTCGACTTGTTTTATGTTTTTTCAGAATTTGCCTCAAGTTTGGTTATTTCAATGAAGTAGTGTTAAGTGTAGTGATCATGTTGAAAGACCGTAGCTACCATATCCAACTATACATTTCCAATGTGCATGTAAGAAGGGATAGATTCTCAAAATTCATGACAAGTTTGATAGTTTACTAATATAGAGAGTTAGTAGCTTTTCGGGTAACATCAAAGAAGTGTAGGACTATTGCTGAAAATTTTGTTACATGACAGAGAAACCAACAGTAAACTTAAAAAGTTTAAAATTATATGCTTAATTTTTTGTATGCTTGTTAAATGACTATCGATATTAATGGGAAAGAAAAGACATTGTAGGACTTTGAACACAAGGTATGATGTTATGTTAAGTTGTTGCTAAACCCAAAAACTTATATTGATAGGTAAGTGTATATTTGATTTCTTATATCTGTGCTTTTATTATTTTCAATGGATATAAACTCTGGATTTTAGTTACTCATATGATAAACAAGAAATTAAAGGAAAAGGAACAATGGTAAACCAAGCAATTCATATACTGCTGGTGGCTACCTTGGTCTATAATTTGTTGATCACAAGTCTTGTGTTGTAAGGATTACAGCAATGGCTTTGGTGTGGCAATATGGAGAGAAATCTGGCAATGAATCTTGGAAGGGACTTTCTTGGGGAATGGTAAGTTCTTTTTCTCTGTCTATGTTGTTTTCTTATCTATGATCGATCTTATAGCTAGGAGTTTTTTTTTTCTTCGAACTTTAAAGAATCAATCCATTTATTTATATAACAATTCAGGTAAAAGTTAAAATTAAATTCAGAGAGAGAGAGAGAGAGAGAGTAGATTAGTATTTCTTTAATCTCTCTCTGGTCATTTTCCTTCTTTGAAAAGAGAAAGAGAAGAAGAAGAGGAAAGTAATGCTTAGCAAATCTTAAACTGATATTACCTAACATATTAAAGTAAACCATCACAAACAGAGCACAAATGTAAATTGGATTCAATTTACCCTTAGTGGCTTGGGATCATTCAATTAGAGAAGTATTAACTTATGGGCTGTTTTCAATAAAGTCATAATTTGGCCATGTAGGTCTTCAAAGCTTTTAGGTTTCTTTTGAACGGCTCAACTCAACCACTCTGGACAGATAACTAACAGTGGTTGCTTCCTTCTGAATTCTCTCTTAACTGGAGCAGGTACCATTGCTAGGTGGAGCATTTTGTGCTTGTACATGGCATTTTTTCTACAACTCCGAGTCTCTTGAGGTACACTGAGTTTCTTCTTTTGCAAGATCTTGTTGGACATAATGAAATAACTGATAGTGTTCATATATTCTAAATAACCAATACGAAGTTATAATCTATTCTTGATCATTATGATTTTTTTTAAAGTTTTGAAACTATTAAAAGGTACACCTAGCCGAAATAGTTTTCTGTCATTCATATATTAGCTTCTTTCAATTATCCTCATTATGGAAATTTTAGAGCACCTCAGTATAAGCTCTTCAAGTGTAGTCATAAAACAAACCATCAATTGGGGAACTTTGTCTGTAACATGCTCAATCTAGTGCAATTCTTCATTTACCACCTCTGAATTTCCACTCCAATCTCCCAACTTAATGATACGAACACTGCTGTGTTATTGATATTTAAAGGGAAATACAAGGGGCTAAGGGAGAATTTTGAGAGCTCCCTAACCTCTCCCAATACCAAACTCTTCCCCAGCACGTCTACTCTACCCCTCTGCCTCTCTTCCTAGTATAGACATTGACATTCTTAACCGAGGCCTATCACTTAAGTTCATCGTCATTTTGGGTTTTCATTTCTAAATTTGAACTCTGAGATCGCAAGGAGAATCAACTCCTTGTCGCCTGTTTTGTTATCAGTCAGGATGTTCCCAGTTATATCTTCAAATTTTGTTAACTGAGCATTTGTTTCTTTTTTCCCGTTTCAATGTCAGTCAAATATTTGTGTTGGCATGGAACTCCATAAATTATGAATTTCTCTTGGTGCACTGGTTTTTTAAAAACTTTTCTTTATACCTTTCAACTACAACTAAGAGGGTAGTTGTGTGTGGCGCCATGGCCTAGATAATGTTGCAAATTTGGGTCCTTGAATTTTGTCCAACTCCTACAATAGTGAAAACTAAAAACACCAAGGAGAGGAAACTAGATGGAATTTATTACTATTTTTGAAGTGCTCCCACTTTTTATGTTCATTTCTTGAATTGCAGCATCAGATATATTCTTGCTTTCTATCCTAATTTGTTAATGTCTGCTAGATGGCAATAGTTTTATGCATCAAATTTCACAAGAATTAGGGACGTTTGATTTCTGTTGGAACAAAAGACAGTTTGATGAATTGGATTTCTTGTTTTTGGATTCAGTTCTTTTAAATTTTCTTAAAGACCAGTTATTTAGCTTGATTCATGGTTATAATTTCTGAACAAAATAATTAGAAGTGTAGAAAACCACCGACTCATTTCTCTTCCTCTACTTTGCTTCACTCTTCCATAAATTTCTTTCACAATACTTCCAACATACCATTGGTTGGTCCAATCACATAAGTGCATTCCGTATGTCACAACATTTGATTGTGAACAGCTTGAGGTCCAAACTTGGCCAAGAAAGACAAGGAAGAAGGATGGGAAAAATGAAGAAAAACTGATTCAAACTAATCTCTCTCTGGGTTTAGATTAATAGCATTCAGATTCTATTGGCTTAGTTTCAAGAGAACAAGAGCAACCTTACTGTGAAAAATACAGAGTGACCCATCTCTCTCTCTCTCTCCCTCTAGATGAAACTGATCTCTCTTTCTCTCTGGGATTAGGTTCATAGGATTCAGATTCCATTGGCGTACTTCGAGGAATCCTTCGATATTAGTGGTTGTGTATAACTGATTTTTCTCAATCTTTTCGGCAAGTTTCAAAATAACAAGGCAGGCACCTGTCCCTCTGTCCCTCTGATTCCATGCTTGGGATTTGTTTGTAAGGGAAGTCAGTTCTATTAGTTCAGTTTCAAAAGGGAAAGATCAACCTCAAGTCCTCAACATGAAAAGGCTATAAAATGACTTGGATTTGGTGTTGAGTGCAGGTTTTGGTGGCCCTTCAGGCAATACTGACGGCCATAGGAAATGCCACAATGTGCATTGCTGCATTTCGAATATACAAATCTTCACAAGAACGTTCAAGGAACTTGTAA

mRNA sequence

ATGTCCATGTCGCTCACCTCCACCTTGTCATATTCCTTCTCTAATCCCAAATCGCCCATTTCCTCGTCTTCTTCTTCTTCCCCCTCGCTGCCCAGGTCCAGAGATTTTGCCGCTCCGACGGGAACCCAACTCCGGAGGATTATCGGTTCCGGTCTGGCTTTGCACTCGAAAACCATGGTGGTTTTGCTCGGCACGGGCTTCACTCTTGCCCTTCTGGGACCTGAATCGGCTTCTGCTGCGGCGGAATTGCAGTCTTCGCTGCAATTTAACGAGCCCCAGAATGCTCTCTCCTTGCCCACCTGGGCCATTCATGTTTCCAGTGTTGTTGAGTGGATTACAGCAATGGCTTTGGTGTGGCAATATGGAGAGAAATCTGGCAATGAATCTTGGAAGGGACTTTCTTGGGGAATGGTACCATTGCTAGGTGGAGCATTTTGTGCTTGTACATGGCATTTTTTCTACAACTCCGAGTCTCTTGAGGTTTTGGTGGCCCTTCAGGCAATACTGACGGCCATAGGAAATGCCACAATGTGCATTGCTGCATTTCGAATATACAAATCTTCACAAGAACGTTCAAGGAACTTGTAA

Coding sequence (CDS)

ATGTCCATGTCGCTCACCTCCACCTTGTCATATTCCTTCTCTAATCCCAAATCGCCCATTTCCTCGTCTTCTTCTTCTTCCCCCTCGCTGCCCAGGTCCAGAGATTTTGCCGCTCCGACGGGAACCCAACTCCGGAGGATTATCGGTTCCGGTCTGGCTTTGCACTCGAAAACCATGGTGGTTTTGCTCGGCACGGGCTTCACTCTTGCCCTTCTGGGACCTGAATCGGCTTCTGCTGCGGCGGAATTGCAGTCTTCGCTGCAATTTAACGAGCCCCAGAATGCTCTCTCCTTGCCCACCTGGGCCATTCATGTTTCCAGTGTTGTTGAGTGGATTACAGCAATGGCTTTGGTGTGGCAATATGGAGAGAAATCTGGCAATGAATCTTGGAAGGGACTTTCTTGGGGAATGGTACCATTGCTAGGTGGAGCATTTTGTGCTTGTACATGGCATTTTTTCTACAACTCCGAGTCTCTTGAGGTTTTGGTGGCCCTTCAGGCAATACTGACGGCCATAGGAAATGCCACAATGTGCATTGCTGCATTTCGAATATACAAATCTTCACAAGAACGTTCAAGGAACTTGTAA

Protein sequence

MSMSLTSTLSYSFSNPKSPISSSSSSSPSLPRSRDFAAPTGTQLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESASAAAELQSSLQFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAIGNATMCIAAFRIYKSSQERSRNL

Homology

[Close]

BLAST of Lag0017611 vs. NCBI nr
Match: XP_022152779.1 (uncharacterized protein LOC111020415 [Momordica charantia])

HSP 1 Score: 320.1 bits (819), Expect = 1.3e-83
Identity = 176/201 (87.56%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 3   MSLTSTLSYSFSNPKSPISSSSSSSPSLPRSRDFAAPT----GTQLRRIIGSGLALHSKT 62
           M LTSTL +SFSNPK PISSSSSSSP  PRSRDFAAP+    G + RRIIG+GL L SK+
Sbjct: 1   MPLTSTLLHSFSNPKCPISSSSSSSP--PRSRDFAAPSKXPPGIRFRRIIGAGLVLDSKS 60

Query: 63  MVVLLGTGFTLALLGPESASAAAELQ----SSLQFNEPQNALSLPTWAIHVSSVVEWITA 122
           MVVLLGTGFTLALLGPESASAAAELQ    SSLQFNEPQNALSLPTWAIHVSSVVEWITA
Sbjct: 61  MVVLLGTGFTLALLGPESASAAAELQALGASSLQFNEPQNALSLPTWAIHVSSVVEWITA 120

Query: 123 MALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAIGN 182
           MALVWQYGEKSGNE+WKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTA+GN
Sbjct: 121 MALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGN 180

Query: 183 ATMCIAAFRIYKSSQERSRNL 196
           ATMCIAAFRIYK SQERSRNL
Sbjct: 181 ATMCIAAFRIYK-SQERSRNL 198

[Close]

BLAST of Lag0017611 vs. NCBI nr
Match: XP_023005556.1 (uncharacterized protein LOC111498507 [Cucurbita maxima])

HSP 1 Score: 303.9 bits (777), Expect = 9.9e-79
Identity = 172/204 (84.31%), Postives = 179/204 (87.75%), Query Frame = 0


Query: 3   MSLTSTLSYSFSNPKSPISSSSSSSPSLPRS-RDFAAP----TGTQLRRIIGSGLALHSK 62
           MSLTSTL +SFSNPK PISSSSSS  SLPRS  DFAA     TG +  RIIG+GLAL SK
Sbjct: 1   MSLTSTLLHSFSNPKCPISSSSSS--SLPRSATDFAASSQALTGIRFPRIIGAGLALDSK 60

Query: 63  TMVVLLGTGFTLALLGPES--ASAAAELQ----SSLQFNEPQNALSLPTWAIHVSSVVEW 122
           TMVVL+GTG TLALLGPES  A+AA ELQ    SSLQFNEPQNALSLPTWAIHVSSVVEW
Sbjct: 61  TMVVLIGTGLTLALLGPESAAATAATELQSLGASSLQFNEPQNALSLPTWAIHVSSVVEW 120

Query: 123 ITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTA 182
           ITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTA
Sbjct: 121 ITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTA 180

Query: 183 IGNATMCIAAFRIYKSSQERSRNL 196
           +GNATMCIAAFRIYK+SQERS  L
Sbjct: 181 VGNATMCIAAFRIYKASQERSSKL 202

[Close]

BLAST of Lag0017611 vs. NCBI nr
Match: KAG6596827.1 (hypothetical protein SDJN03_10007, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 302.8 bits (774), Expect = 2.2e-78
Identity = 171/205 (83.41%), Postives = 178/205 (86.83%), Query Frame = 0


Query: 3   MSLTSTLSYSFSNPKSPISSSSSSSPSLPRS-RDFAAP----TGTQLRRIIGSGLALHSK 62
           MSLTSTL  SFSNPK PISSSSSSS SLPRS  DFAA     T  +  RIIG+GLAL SK
Sbjct: 1   MSLTSTLFRSFSNPKCPISSSSSSSSSLPRSATDFAASSQALTRIRFPRIIGAGLALDSK 60

Query: 63  TMVVLLGTGFTLALLGPESA---SAAAELQ----SSLQFNEPQNALSLPTWAIHVSSVVE 122
           TMVVL+GTG TLALLGPESA   +AA ELQ    SSLQFNEPQNALSLPTWAIHVSSVVE
Sbjct: 61  TMVVLIGTGLTLALLGPESAAATAAATELQSLGASSLQFNEPQNALSLPTWAIHVSSVVE 120

Query: 123 WITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILT 182
           WITAMALVWQYGEKSG+ESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILT
Sbjct: 121 WITAMALVWQYGEKSGDESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILT 180

Query: 183 AIGNATMCIAAFRIYKSSQERSRNL 196
           A+GNATMCIAAFRIYK+SQERS  L
Sbjct: 181 AVGNATMCIAAFRIYKASQERSSKL 205

[Close]

BLAST of Lag0017611 vs. NCBI nr
Match: XP_023539827.1 (uncharacterized protein LOC111800391 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301.6 bits (771), Expect = 4.9e-78
Identity = 171/205 (83.41%), Postives = 178/205 (86.83%), Query Frame = 0


Query: 3   MSLTSTLSYSFSNPKSPISSSSSSSPSLPRS-RDFAAP----TGTQLRRIIGSGLALHSK 62
           MSLTSTL +SFSNPK PISSSSSS  SLPRS  DFAA     TG +  R IG+GLAL SK
Sbjct: 1   MSLTSTLFHSFSNPKCPISSSSSS--SLPRSATDFAASSQALTGIRFPRTIGAGLALDSK 60

Query: 63  TMVVLLGTGFTLALLGPESA---SAAAELQ----SSLQFNEPQNALSLPTWAIHVSSVVE 122
           TMVVL+GTG TLALLGPESA   +AA ELQ    SSLQFNEPQNALSLPTWAIHVSSVVE
Sbjct: 61  TMVVLIGTGLTLALLGPESAAATAAATELQSLGASSLQFNEPQNALSLPTWAIHVSSVVE 120

Query: 123 WITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILT 182
           WITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILT
Sbjct: 121 WITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILT 180

Query: 183 AIGNATMCIAAFRIYKSSQERSRNL 196
           A+GNATMCIAAFRIYK+SQERS  L
Sbjct: 181 AVGNATMCIAAFRIYKASQERSSKL 203

[Close]

BLAST of Lag0017611 vs. NCBI nr
Match: XP_022944188.1 (uncharacterized protein LOC111448709 [Cucurbita moschata])

HSP 1 Score: 298.5 bits (763), Expect = 4.2e-77
Identity = 171/205 (83.41%), Postives = 178/205 (86.83%), Query Frame = 0


Query: 3   MSLTSTLSYSFSNPKSPISSSSSSSPSLPRS-RDFAAP----TGTQLRRIIGSGLALHSK 62
           MSLTSTL  SFSNPK PISSSSSSS SLPRS  DFAA     T  +  RIIG+GLAL SK
Sbjct: 1   MSLTSTLFRSFSNPKCPISSSSSSS-SLPRSATDFAASSQALTRIRFPRIIGAGLALDSK 60

Query: 63  TMVVLLGTGFTLALLGPESA---SAAAELQ----SSLQFNEPQNALSLPTWAIHVSSVVE 122
           TMVVL+GTG TLALLGPESA   +AA ELQ    SSLQFNEPQNALSLPTWAIHVSSVVE
Sbjct: 61  TMVVLIGTGLTLALLGPESAAATAAATELQSLGASSLQFNEPQNALSLPTWAIHVSSVVE 120

Query: 123 WITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILT 182
           WITAMALVWQYGEKSG+ESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILT
Sbjct: 121 WITAMALVWQYGEKSGDESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILT 180

Query: 183 AIGNATMCIAAFRIYKSSQERSRNL 196
           A+GNATMCIAAFRIYK+SQERS  L
Sbjct: 181 AVGNATMCIAAFRIYKASQERSSKL 204

[Close]

BLAST of Lag0017611 vs. ExPASy Swiss-Prot
Match: Q55720 (Ycf49-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll0608 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-28
Identity = 58/99 (58.59%), Postives = 74/99 (74.75%), Query Frame = 0


Query: 94  NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFF 153
           NALS+PTW +HVSSV+EWI A+ALV +Y  K+G   W+ L+WGMVP L  A CACTWHFF
Sbjct: 2   NALSIPTWMVHVSSVIEWIVAIALVSRYATKAGYGHWRALAWGMVPALVSATCACTWHFF 61

Query: 154 YNSESLEVLVALQAILTAIGNATMCIAAFRIYKSSQERS 193
            N+  L+ LV LQA+ T IGN T+C+AA+ IY+ S + S
Sbjct: 62  DNASQLDWLVTLQALTTVIGNITLCLAAWWIYRQSAQPS 100

[Close]

BLAST of Lag0017611 vs. ExPASy Swiss-Prot
Match: P15811 (Uncharacterized protein ycf49 OS=Cyanophora paradoxa OX=2762 GN=ycf49 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.3e-08
Identity = 35/101 (34.65%), Postives = 49/101 (48.51%), Query Frame = 0


Query: 94  NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFF 153
           N LS  TW +H+SSV+EW+  +     Y +   N S K   +        A CACT HFF
Sbjct: 2   NVLSYFTWFVHLSSVLEWLNIIYFFLLYTKLKKNLSLKTFIFSFFISFCSALCACTLHFF 61

Query: 154 YNSESLEVLVALQAILTAIGNATMCIAAFRIYKSSQERSRN 195
            N      L+ LQ+ LT   N T+  +   IYK    +++N
Sbjct: 62  NNQSFYYFLINLQSFLTLFANITLYFSIL-IYKQQILKNQN 101

[Close]

BLAST of Lag0017611 vs. ExPASy Swiss-Prot
Match: Q9TM18 (Uncharacterized protein ycf49 OS=Cyanidium caldarium OX=2771 GN=ycf49 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-04
Identity = 29/83 (34.94%), Postives = 45/83 (54.22%), Query Frame = 0


Query: 95  ALSLPTWAIHVSSVVEWITAMALVW---QYGEKSGNESWKGLSWGMVPLLGGAFCACTWH 154
           +LSLPTW IH+ ++VEW   + L++    + +   + ++  +   +   L G F AC WH
Sbjct: 3   SLSLPTWNIHIVTLVEWSIVIRLIYLFTYFYDIPRSFNFLIIILMIFFFLSGLF-ACCWH 62

Query: 155 FFYNSESLEVLVALQAILTAIGN 175
           FF N+  L  +   QA LTA  N
Sbjct: 63  FFNNNSILLWISVAQAALTAFSN 84

[Close]

BLAST of Lag0017611 vs. ExPASy TrEMBL
Match: A0A6J1DH09 (uncharacterized protein LOC111020415 OS=Momordica charantia OX=3673 GN=LOC111020415 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.5e-84
Identity = 176/201 (87.56%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 3   MSLTSTLSYSFSNPKSPISSSSSSSPSLPRSRDFAAPT----GTQLRRIIGSGLALHSKT 62
           M LTSTL +SFSNPK PISSSSSSSP  PRSRDFAAP+    G + RRIIG+GL L SK+
Sbjct: 1   MPLTSTLLHSFSNPKCPISSSSSSSP--PRSRDFAAPSKXPPGIRFRRIIGAGLVLDSKS 60

Query: 63  MVVLLGTGFTLALLGPESASAAAELQ----SSLQFNEPQNALSLPTWAIHVSSVVEWITA 122
           MVVLLGTGFTLALLGPESASAAAELQ    SSLQFNEPQNALSLPTWAIHVSSVVEWITA
Sbjct: 61  MVVLLGTGFTLALLGPESASAAAELQALGASSLQFNEPQNALSLPTWAIHVSSVVEWITA 120

Query: 123 MALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAIGN 182
           MALVWQYGEKSGNE+WKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTA+GN
Sbjct: 121 MALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGN 180

Query: 183 ATMCIAAFRIYKSSQERSRNL 196
           ATMCIAAFRIYK SQERSRNL
Sbjct: 181 ATMCIAAFRIYK-SQERSRNL 198

[Close]

BLAST of Lag0017611 vs. ExPASy TrEMBL
Match: A0A6J1KVA7 (uncharacterized protein LOC111498507 OS=Cucurbita maxima OX=3661 GN=LOC111498507 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.8e-79
Identity = 172/204 (84.31%), Postives = 179/204 (87.75%), Query Frame = 0


Query: 3   MSLTSTLSYSFSNPKSPISSSSSSSPSLPRS-RDFAAP----TGTQLRRIIGSGLALHSK 62
           MSLTSTL +SFSNPK PISSSSSS  SLPRS  DFAA     TG +  RIIG+GLAL SK
Sbjct: 1   MSLTSTLLHSFSNPKCPISSSSSS--SLPRSATDFAASSQALTGIRFPRIIGAGLALDSK 60

Query: 63  TMVVLLGTGFTLALLGPES--ASAAAELQ----SSLQFNEPQNALSLPTWAIHVSSVVEW 122
           TMVVL+GTG TLALLGPES  A+AA ELQ    SSLQFNEPQNALSLPTWAIHVSSVVEW
Sbjct: 61  TMVVLIGTGLTLALLGPESAAATAATELQSLGASSLQFNEPQNALSLPTWAIHVSSVVEW 120

Query: 123 ITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTA 182
           ITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTA
Sbjct: 121 ITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTA 180

Query: 183 IGNATMCIAAFRIYKSSQERSRNL 196
           +GNATMCIAAFRIYK+SQERS  L
Sbjct: 181 VGNATMCIAAFRIYKASQERSSKL 202

[Close]

BLAST of Lag0017611 vs. ExPASy TrEMBL
Match: A0A6J1FXT1 (uncharacterized protein LOC111448709 OS=Cucurbita moschata OX=3662 GN=LOC111448709 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77
Identity = 171/205 (83.41%), Postives = 178/205 (86.83%), Query Frame = 0


Query: 3   MSLTSTLSYSFSNPKSPISSSSSSSPSLPRS-RDFAAP----TGTQLRRIIGSGLALHSK 62
           MSLTSTL  SFSNPK PISSSSSSS SLPRS  DFAA     T  +  RIIG+GLAL SK
Sbjct: 1   MSLTSTLFRSFSNPKCPISSSSSSS-SLPRSATDFAASSQALTRIRFPRIIGAGLALDSK 60

Query: 63  TMVVLLGTGFTLALLGPESA---SAAAELQ----SSLQFNEPQNALSLPTWAIHVSSVVE 122
           TMVVL+GTG TLALLGPESA   +AA ELQ    SSLQFNEPQNALSLPTWAIHVSSVVE
Sbjct: 61  TMVVLIGTGLTLALLGPESAAATAAATELQSLGASSLQFNEPQNALSLPTWAIHVSSVVE 120

Query: 123 WITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILT 182
           WITAMALVWQYGEKSG+ESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILT
Sbjct: 121 WITAMALVWQYGEKSGDESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILT 180

Query: 183 AIGNATMCIAAFRIYKSSQERSRNL 196
           A+GNATMCIAAFRIYK+SQERS  L
Sbjct: 181 AVGNATMCIAAFRIYKASQERSSKL 204

[Close]

BLAST of Lag0017611 vs. ExPASy TrEMBL
Match: A0A0A0L4G0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036550 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 8.5e-76
Identity = 159/193 (82.38%), Postives = 166/193 (86.01%), Query Frame = 0


Query: 3   MSLTSTLSYSFSNPKSPISSSSSSSPSLPRSRDFAAPTGTQLRRIIGSGLALHSKTMVVL 62
           MSLTS L YSFS PKSP+  S+  +P+      F  PTG   RR I S L   SKTMVVL
Sbjct: 1   MSLTSPLLYSFSIPKSPLPISTDFAPT------FQLPTGVSFRRPI-SRLGFPSKTMVVL 60

Query: 63  LGTGFTLALLGPESASAAAELQSSLQFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYG 122
           LGTGFTLALLGPESASAA EL SSL FNEPQNALSLPTWAIHVSSVVEWITAMALVWQYG
Sbjct: 61  LGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYG 120

Query: 123 EKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAIGNATMCIAAF 182
           EKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVA+QA+LTAIGNATMCIAAF
Sbjct: 121 EKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAF 180

Query: 183 RIYKSSQERSRNL 196
           RIYKSSQERS+NL
Sbjct: 181 RIYKSSQERSKNL 186

[Close]

BLAST of Lag0017611 vs. ExPASy TrEMBL
Match: A0A1S3BLS2 (ycf49-like protein OS=Cucumis melo OX=3656 GN=LOC103490947 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 5.5e-75
Identity = 158/193 (81.87%), Postives = 165/193 (85.49%), Query Frame = 0


Query: 3   MSLTSTLSYSFSNPKSPISSSSSSSPSLPRSRDFAAPTGTQLRRIIGSGLALHSKTMVVL 62
           MSLTS L YSFS PKSP+  S+  +P+         PTG   RR I S L   SK MVVL
Sbjct: 1   MSLTSPLLYSFSIPKSPLPISTDFAPTT------QLPTGVSFRRPI-SRLGFPSKAMVVL 60

Query: 63  LGTGFTLALLGPESASAAAELQSSLQFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYG 122
           LGTGFTLALLGPESASAA ELQSSL FNEPQNALSLPTWAIHVSSVVEWITAMALVWQYG
Sbjct: 61  LGTGFTLALLGPESASAATELQSSLLFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYG 120

Query: 123 EKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAIGNATMCIAAF 182
           EKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVA+QA+LTAIGNATMCIAAF
Sbjct: 121 EKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAF 180

Query: 183 RIYKSSQERSRNL 196
           RIYKSSQERS+NL
Sbjct: 181 RIYKSSQERSKNL 186

The following BLAST results are available for this feature:

BLAST of Lag0017611 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152779.1	1.3e-83	87.56	uncharacterized protein LOC111020415 [Momordica charantia]	[more]
XP_023005556.1	9.9e-79	84.31	uncharacterized protein LOC111498507 [Cucurbita maxima]	[more]
KAG6596827.1	2.2e-78	83.41	hypothetical protein SDJN03_10007, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023539827.1	4.9e-78	83.41	uncharacterized protein LOC111800391 [Cucurbita pepo subsp. pepo]	[more]
XP_022944188.1	4.2e-77	83.41	uncharacterized protein LOC111448709 [Cucurbita moschata]	[more]

BLAST of Lag0017611 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q55720	1.3e-28	58.59	Ycf49-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN...	[more]
P15811	4.3e-08	34.65	Uncharacterized protein ycf49 OS=Cyanophora paradoxa OX=2762 GN=ycf49 PE=3 SV=1	[more]
Q9TM18	1.7e-04	34.94	Uncharacterized protein ycf49 OS=Cyanidium caldarium OX=2771 GN=ycf49 PE=3 SV=1	[more]

BLAST of Lag0017611 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DH09	6.5e-84	87.56	uncharacterized protein LOC111020415 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1KVA7	4.8e-79	84.31	uncharacterized protein LOC111498507 OS=Cucurbita maxima OX=3661 GN=LOC111498507...	[more]
A0A6J1FXT1	2.0e-77	83.41	uncharacterized protein LOC111448709 OS=Cucurbita moschata OX=3662 GN=LOC1114487...	[more]
A0A0A0L4G0	8.5e-76	82.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036550 PE=4 SV=1	[more]
A0A1S3BLS2	5.5e-75	81.87	ycf49-like protein OS=Cucumis melo OX=3656 GN=LOC103490947 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019634	Uncharacterised protein family Ycf49	PFAM	PF10693	DUF2499	coord: 95..182 e-value: 4.8E-39 score: 132.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR33833	NUCLEOLAR-LIKE PROTEIN-RELATED	coord: 31..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017611.1	Lag0017611.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane