Lag0017583 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017583
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	peptidyl-tRNA hydrolase ICT1, mitochondrial
Location	chr5: 5613863 .. 5619060 (-)
RNA-Seq Expression	Lag0017583
Synteny	Lag0017583

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTTTCCTTCCATTGCAGCAGAACATCAAGTCAAGTGTTCAAGTAATTTATTCCTTTCATTCTTTATATGATTTAATTTCTCTATTAATTTCTTTTTGACAAAGTTAGATGCTAGGAGGATTTTAAATTGTTCTTTGGCTAGTATATCCTAAAAAGGGAAAAGTTATTCAAATTTCTTGCAGTTTCCTACCCTTAAAGGAAAAAAGCCTTCTCTCATCAGCATTTTGCTAAGATGGTGAATGTGCTCTGATTGCTGTCAGTCATCATCTTCTTTACTTGTGAATTTATCTTTTCCTATCTCTCCCTCACAGACCATGTCACTGTGAATTTTGCAAGAAGTGGTGGCCCTGGGGGTCAGAATGTCAACAAAGGTCAGTTGATTTTCTTGGGCTGCTGATTGGTTTTGTTTCTACTTTAGAGTTGCTGTTTTCTTTATAAGGTATTATTTCCGTAATTGATAGTGCAGTGAACACGAAGGTTGACATGCGCTTCAATGTTAAAGATGCATATTGGCTAAGTGACAGAATCAGGGAAAGGATTATGCAAATGGTTTGTTACTCAAATTTTCTATTGCATCTCTTCTCTCTCCTTCGCTCAAATGAAATATATCTCTGAAGATAATTTGCTTTCAGTCTCTATCTCTGAAGGTAATGTATCAACGAAATTTGTTTCTTTTTCCTTGACAACCAAAATGTAGTAGGGTCAAACGGTTGTCTCATGAGATAGGTCGAAGTACACTCAGGCTAGGCTGAATACTCACAAATATAAAATAAAAAGAAAGAAATAAAAAAGAAATTTGTTTGTTATATAAAAAAAGACTTTTAAAAGCTAACTATTTAAACTCTAAAATTCGAAATGGTTTCTGTCATTATTTTGAAATTTAGGTACCGGAAAGTACTTGTGAAATTTTATAGACCGACAAGGTATTCATCTCATATTTTAATACAACTATGTGGTTTTTTGAATAGAAAAACAATTGAATCAATACAATATGACTATGGAACGAAGATGAAAGTTTATTTTGTGTACAATTCATAATGTGTTCCCTTGGATGCTGCTAGCTAGGCAAAAATAAAATTGGAAGTGGTTCAAGTTTTCATAATTCTTTCATCATGATATTGCTTCGTTTCTCTGGTCTATCTTGACATGAATATTGCTCCCTGCTTCTGAACAGGAGAAAAATCGGATCAATAAGGATGGGGAGCTTGTAATTTCATCCACTAAAACTAGAACGCAGAAGTTAACTTCAGTCCTCTTCATTTTTTATTTTCCCTCCCACGTTCGTTCTACCAAAAATAACTTTTCTTATTTTCTTCATTTCTTTAGGGGTAACATTGAAGATGCCTTGGAGAAACTTCAGGTACTTTGCCTTCCTATAAGATCCTTCTCTTTCTCTTCTTGTCTCAAATATATTCACATGGAAAATAAAATAGTCCGTGGCCATTTCTTAGATGGTAAATATTGCACATAAGATTAAGCATCCTTCCATAATTTCTTAACTTAATATAAATTTCCAATCAATGAGTTTGTTTCTATCTGAAAATCAGGCAATAATTGATGCTGCTTCTTATGTTCCGCCGCCTCCCTCAGAAGAGCAAAAGAAGAAAATTGCTAAGATGTGAGATCTTTCAACTTCCATGGTCACCTAGTTTCAAAAAGTTCATGTAGCTCCCATGATATACTTAATTGTGTGGTAACCTTTTGTGTTTGTAAAGGGCTGCTATTGGGGAACAGAAACGCCTTAAAAGCAAGAAGGTCCTTTCAGATAAGAAGGCATTTCGAAGGAGTCGAGACAGTTGGGATTAACGATATTGCTATGTAGAGTTCATCAACATTACAACTTCATACTTTCCAAACTTCTCTTCTCACAAAGAAGTTACCAACTTGTTCCTGTTTTGTTTTTTGATCGACTTTGCAGCTTACTCTTTTAGCTCAGGAAAATAATACAGGATTTTCAAAAAGTAATACCATGATTCTCTGGTGCAATGAAGAAATCATTCAGAGCAAAACCTGTTGGAAGCAGAGGACTTGGAGATTTGCTTCCTTCACAGGTGATTTCTGGAAATTGCTAGAAATGGATATAAGATAATAGATAACAATTTTTCTTTTTTACTTGATTGGTGCATTATGTATTTGAAGCACCAACTTAGAATCCAAGAGATCTTATAGAACTTCCCCTCTGTAGATGCGAGAACATTGACACACAATGTCTCGTTTCGTCAATGTATGCTAAACTAATATCAATTCAGTTTTAGCTTCTTTTTATTCGCTTTGTTCAAGTCATATGCATGCCTAAGTTGGTTCATTTCAAAAAACCAGAATTAGGAAAAATAAGAAAATTTACCAGGAAGTGTTGTGTAGTTGTGCTAGTTGTACTGAGTCCTTAGCTTTTTGTTGCTACACAAAGGAACTTTATTCAAGATGGCTTGATAGTCTAATTTTGGAAGAGATTGGTGGCTTGGGAAGAATCCCATGTGTTTCTTTTCTTAAACTTGGTAACTTAACTTGTGTCCTCCTAAAGGAAATTTGGGATAGACATTAATTCTTGATATATCATCTATAATTTACTATCAATTTGATCGTATATATTGGATCGGAGATCGATATTGATATAGATATTGAGACGATTTGTCTTTAATAGCTCAATTTCTTTGAATCAACAAGATGGAGAAATGCAGGCACCTTGGATGGATGTTTTTTTTCCGTGCATTATTTTCTCGTCTTTTGGTTGAGGGTATGTCTTAACTAGTTATGTTTAGGCTTGAGCATTTTTTATTTCATTTAAATTTTAATGATTATTATTAGTGGTATTTTGATAATACATGTAGTACTTTATTTTGTAAAAAGATTTTATTATATAGTTTTGGTTAAATAGTACATAGGCGAGGAACATTTTAGTAAGAATTAAACATTTTTTTTTCTTTTTATTCCTGAAATTTTATCCTTATTTTGATCCTCAAATTTTAAAACATATTGTTTAATCTCTAAATTATGGTTAAAAAAAATCTATATTTTAATAAATTCTTCTGCAGAAACTTGATACCTTTTATTTATTTATTATTGTTTTTTTGAGATATTATTTACTAATTGATTCATTCATACATTATTATTATTATTTTTGAGACATTATTTATTTTTTATTATTTTTTATGAGTAGCTGAGTGGTAGGTTAAATGTTGGTTATCTAAATAGATCAAAATTAATTTAAATAGTTAACAAAAAGTTAATGACAAAGACGGATAAAAACTAAAATAATTGTTATGTACAATTTAAAATCTAAAGTAGAACAATTGAAAGTCAATAAATTAAAATAAAATATTTGAAAATCAAAAGAAAATAAGCATAAAAGTAAAAAAAAAGAAAACTATAATAAGACTTAAATCAGGATTTCAATTCCTCTAGACAAACTATAAATTTTGTTAAATTATAAGTTTAGTCTCCCGACTTTTAGATTTATGTCTATTTGGTCTCTGAATTTTATAAAATGTCTAATAAATTTTTTAACTTTCATTTTTGTGTCTAATAGGTTCTTGAACTTTAAAAATGTCTAATAGGTTCTTGATTTCATGTTTAATAGGTTCTTTACAAATTTGAGATTTTTAAAAATGACCTAATCTATTAAATTGAATTAACTACAAGGTCTGTGGTTCAAATTTCTCCATTCCATATTGTCAAAAAAATTTGAATTTTATGCCTAATGTGATTCTAAACTTATTTTTATGTCTAATAGCCATGTGAATTAAAAAAATGTCGAATAGGTCAAAAACCTATTAGACGCAAAATGGAAAGTTGATGGACTTTTTGGACATAGAAGTGAAAGTTTAAAGAATTATAAGATACTTTTCAAAGTTCAGAGACCAAATAGACACAATCTTATAAGTTTAGTACTAAACTTGTAATTGAATCAAATTATTTAAATTAAAAAATAAAAATTCATTTTTTTAATTAGTTTAAATTTCTTATTATTAATATTAGGTTACTAATGATATTTTATTAATACTTCTATTATATGTAATGAAAAATGTTTATTTATATCTTATGTCCACGTCGAATTCATAAACCAATGGAAATAATAATTGTAGGGAAAAAAACATAAACTTATCAACTAGTATCAATTTTCGCCCTAGACTTTCAATCTCATCAAATTACACCTCAAATTAAAATAAGTGTTGCAATCTTACATTAAAACTTTAAAAAGTATTGCAACTTTAATCCTCTAATAAGTTTTCACTCCAAATAACGCCAAAAAAAGTTATCTTATGTATTCAATGATTTTATAAAACATATGCATGTTTGGTAAAAAAATACAATACTAGAGTTTAATTTTTCATTAATAGTTAGTTTGTGTTGTTCAAACTTATTTTTGTACAAAACTTGATTTTATTAAAATTAATGAATTTATGAAGATTTTGACAATGTTAAAATTAGTGAGTGAATTAACAAAAATTAAATTAAAGATAAAAATTTCAAACATCTTCTAGATTCAAAGTAAACCTAGATTAGTATTTTTTTGGTTAAAAATCATTTTGGTCCCTAAACTTTCATGAAAGTAACAATTTAGTCATTGAACTTTGATTTATAACGTACTTTCAATTTTGTAACGGTTTAGTCCCTATACTTTCTATTTTGTAACAATTTAGTCCATGAATTTTAATAAGTAACAATTCAGGGCTCGTTTGATAACGTTCCCGTTTCTCCTTTTTTAAGAAACAGACTTGTTTGATAACTCATCCCTGTTTCTTGTTTCTAAATTTCTAGAAACGTTTCTAAAAAAGAGGCCAAATTTGAGAAACTACAAAATGTTGTTTCTCAAATTCTGTTTCTGTTTTTTTTCTCTATCTTTCATGCATGTATCCATCTCTCCCTCTCATTCTCCCACCAATCTCTTCTCTTTCTCTATTTTTTTAACCACTTCCTCGTTTTAATCTTTTTCCATTATTTCGTTCTCTCTTTTTTTTTTTTTATTTTTTTTTCGTTATTTCTTTCTCTTTATTTTTTTTATTATTTATGTTATTTCTTTTTTTTTTTTCCTTTTATTATCACCTCCATGATCTCAGACTACCGGCCACCATCGTTGACATCCGACTATCGATCGTCGCCGACCAGCCACCACTGTCAACCTCCAACAATCAATTGTCGCCGACCGATCGCCTCCGTCGACCTTCGACTATCGGCTGCCGCCGACCTCCCCTGA

mRNA sequence

ATGCCTTTTCCTTCCATTGCAGCAGAACATCAAGTCAAGTGTTCAAACCATGTCACTGTGAATTTTGCAAGAAGTGGTGGCCCTGGGGGTCAGAATGTCAACAAAGTGAACACGAAGGTTGACATGCGCTTCAATGTTAAAGATGCATATTGGCTAAGTGACAGAATCAGGGAAAGGATTATGCAAATGGAGAAAAATCGGATCAATAAGGATGGGGAGCTTGTAATTTCATCCACTAAAACTAGAACGCAGAAGGGTAACATTGAAGATGCCTTGGAGAAACTTCAGGCAATAATTGATGCTGCTTCTTATGTTCCGCCGCCTCCCTCAGAAGAGCAAAAGAAGAAAATTGCTAAGATGGCTGCTATTGGGGAACAGAAACGCCTTAAAAGCAAGAAGCTTACTCTTTTAGCTCAGGAAAATAATACAGGATTTTCAAAAAGTAATACCATGATTCTCTGGTGCAATGAAGAAATCATTCAGAGCAAAACCTGTTGGAAGCAGAGGACTTGGAGATTTGCTTCCTTCACAGACTACCGGCCACCATCGTTGACATCCGACTATCGATCGTCGCCGACCAGCCACCACTGTCAACCTCCAACAATCAATTGTCGCCGACCGATCGCCTCCGTCGACCTTCGACTATCGGCTGCCGCCGACCTCCCCTGA

Coding sequence (CDS)

ATGCCTTTTCCTTCCATTGCAGCAGAACATCAAGTCAAGTGTTCAAACCATGTCACTGTGAATTTTGCAAGAAGTGGTGGCCCTGGGGGTCAGAATGTCAACAAAGTGAACACGAAGGTTGACATGCGCTTCAATGTTAAAGATGCATATTGGCTAAGTGACAGAATCAGGGAAAGGATTATGCAAATGGAGAAAAATCGGATCAATAAGGATGGGGAGCTTGTAATTTCATCCACTAAAACTAGAACGCAGAAGGGTAACATTGAAGATGCCTTGGAGAAACTTCAGGCAATAATTGATGCTGCTTCTTATGTTCCGCCGCCTCCCTCAGAAGAGCAAAAGAAGAAAATTGCTAAGATGGCTGCTATTGGGGAACAGAAACGCCTTAAAAGCAAGAAGCTTACTCTTTTAGCTCAGGAAAATAATACAGGATTTTCAAAAAGTAATACCATGATTCTCTGGTGCAATGAAGAAATCATTCAGAGCAAAACCTGTTGGAAGCAGAGGACTTGGAGATTTGCTTCCTTCACAGACTACCGGCCACCATCGTTGACATCCGACTATCGATCGTCGCCGACCAGCCACCACTGTCAACCTCCAACAATCAATTGTCGCCGACCGATCGCCTCCGTCGACCTTCGACTATCGGCTGCCGCCGACCTCCCCTGA

Protein sequence

MPFPSIAAEHQVKCSNHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKLTLLAQENNTGFSKSNTMILWCNEEIIQSKTCWKQRTWRFASFTDYRPPSLTSDYRSSPTSHHCQPPTINCRRPIASVDLRLSAAADLP

Homology

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BLAST of Lag0017583 vs. NCBI nr
Match: XP_022152820.1 (peptidyl-tRNA hydrolase ICT1, mitochondrial [Momordica charantia])

HSP 1 Score: 227.3 bits (578), Expect = 1.3e-55
Identity = 117/119 (98.32%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 16  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 75
           +HVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV
Sbjct: 98  DHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 157

Query: 76  ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKL 135
           ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKK+
Sbjct: 158 ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKI 216

[Close]

BLAST of Lag0017583 vs. NCBI nr
Match: KAF7828375.1 (peptidyl-tRNA hydrolase ICT1, mitochondrial [Senna tora])

HSP 1 Score: 225.3 bits (573), Expect = 5.1e-55
Identity = 119/133 (89.47%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 16  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 75
           +HVTVNFARSGGPGGQNVNKVNTKVDMRFNVK+AYWLSDRIRE+IMQMEKNRINKDGELV
Sbjct: 97  DHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKNAYWLSDRIREKIMQMEKNRINKDGELV 156

Query: 76  ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKLT 135
           ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKK  
Sbjct: 157 ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKK-- 216

Query: 136 LLAQENNTGFSKS 149
             AQ +   F +S
Sbjct: 217 --AQSDKKAFRRS 225

[Close]

BLAST of Lag0017583 vs. NCBI nr
Match: XP_021691536.1 (peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X2 [Hevea brasiliensis])

HSP 1 Score: 225.3 bits (573), Expect = 5.1e-55
Identity = 115/126 (91.27%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 8   AEHQVKCSNHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNR 67
           AE +   ++HVTVNFARSGGPGGQNVNKVNTKVDMRF+VKDAYWLSDRIRERIMQMEKNR
Sbjct: 81  AEERASSADHVTVNFARSGGPGGQNVNKVNTKVDMRFSVKDAYWLSDRIRERIMQMEKNR 140

Query: 68  INKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQK 127
           INKDGELVISSTKTRTQKGN+EDAL KLQAIIDAA+YVPPPPSEEQKKKIAKMAAIGEQK
Sbjct: 141 INKDGELVISSTKTRTQKGNVEDALAKLQAIIDAAAYVPPPPSEEQKKKIAKMAAIGEQK 200

Query: 128 RLKSKK 134
           RLKSKK
Sbjct: 201 RLKSKK 206

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BLAST of Lag0017583 vs. NCBI nr
Match: XP_021616566.1 (peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X1 [Manihot esculenta] >KAG8662185.1 hypothetical protein MANES_01G073500v8 [Manihot esculenta] >OAY59948.1 hypothetical protein MANES_01G073500v8 [Manihot esculenta])

HSP 1 Score: 224.6 bits (571), Expect = 8.7e-55
Identity = 116/118 (98.31%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 16  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 75
           +HVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV
Sbjct: 99  DHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 158

Query: 76  ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKK 134
           ISSTKTRTQKGNIEDAL KLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKK
Sbjct: 159 ISSTKTRTQKGNIEDALSKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKK 216

[Close]

BLAST of Lag0017583 vs. NCBI nr
Match: XP_038876872.1 (peptidyl-tRNA hydrolase ICT1, mitochondrial [Benincasa hispida] >XP_038876873.1 peptidyl-tRNA hydrolase ICT1, mitochondrial [Benincasa hispida])

HSP 1 Score: 222.2 bits (565), Expect = 4.3e-54
Identity = 114/119 (95.80%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 16  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 75
           +HVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLS+RIRERI+QMEKNRINKDGELV
Sbjct: 116 DHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSERIRERIIQMEKNRINKDGELV 175

Query: 76  ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKL 135
           ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEE+KKKIAKMAAIGEQKRLKSKK+
Sbjct: 176 ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEKKKKIAKMAAIGEQKRLKSKKV 234

[Close]

BLAST of Lag0017583 vs. ExPASy Swiss-Prot
Match: Q8R035 (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl58 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.7e-19
Identity = 54/135 (40.00%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 9   EHQVKCSNHV-----TVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQM 68
           EH  + S+++     ++++ RS GPGGQNVNKVN+K ++RF++  A W+ + +R++I   
Sbjct: 63  EHAKQASSYIPLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALT 122

Query: 69  EKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEE----QKKKIAK 128
            KN+INK GELV++S  +R Q  N+ + L+K++ +I  AS VP  PS+E    Q+ +I K
Sbjct: 123 HKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAEASQVPKEPSKEDARLQRLRIEK 182

Query: 129 MAAIGEQKRLKSKKL 135
           M     ++RL+ K+L
Sbjct: 183 M----NRERLRQKRL 193

[Close]

BLAST of Lag0017583 vs. ExPASy Swiss-Prot
Match: B5XAM2 (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Salmo salar OX=8030 GN=mrpl58 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.0e-19
Identity = 51/119 (42.86%), Postives = 81/119 (68.07%), Query Frame = 0


Query: 16  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 75
           + +TV+++RS GPGGQ+VNKV+TK ++RF+V  A W+ + +R++I+   KNRINK GEL+
Sbjct: 60  DRLTVSYSRSSGPGGQHVNKVSTKAEVRFHVYTADWIPEDVRQKIILNNKNRINKAGELL 119

Query: 76  ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKL 135
           ++S ++R+Q+ N+ D ++K+  II  A+  P  PS E     A       ++RLK KKL
Sbjct: 120 VTSEQSRSQQRNMGDCIQKISDIIAKATEKPHEPSAEDIALRASRLEKRNKERLKQKKL 178

[Close]

BLAST of Lag0017583 vs. ExPASy Swiss-Prot
Match: D2HD32 (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Ailuropoda melanoleuca OX=9646 GN=MRPL58 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.0e-17
Identity = 45/119 (37.82%), Postives = 79/119 (66.39%), Query Frame = 0


Query: 16  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 75
           + +T+++ RS GPGGQNVNKVN+K ++RF++  A W+++ +R+++  M KN+IN+ GEL+
Sbjct: 75  DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKMAIMHKNKINRSGELI 134

Query: 76  ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKL 135
           ++S  +R Q  N+ D L+K++ +I  AS  P  PS+E             ++RL+ K++
Sbjct: 135 LTSECSRYQFRNLADCLQKIRDMIAEASQTPKEPSKEDAALHRIRIENMNRERLRKKRI 193

[Close]

BLAST of Lag0017583 vs. ExPASy Swiss-Prot
Match: Q14197 (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL58 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.6e-17
Identity = 45/119 (37.82%), Postives = 79/119 (66.39%), Query Frame = 0


Query: 16  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 75
           + +T+++ RS GPGGQNVNKVN+K ++RF++  A W+++ +R++I    KN+IN+ GEL+
Sbjct: 75  DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELI 134

Query: 76  ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKL 135
           ++S  +R Q  N+ D L+K++ +I  AS  P  P++E  K          ++RL+ K++
Sbjct: 135 LTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRIENMNRERLRQKRI 193

[Close]

BLAST of Lag0017583 vs. ExPASy Swiss-Prot
Match: Q3T116 (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Bos taurus OX=9913 GN=MRPL58 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.7e-16
Identity = 47/123 (38.21%), Postives = 82/123 (66.67%), Query Frame = 0


Query: 16  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 75
           + +T+++ RS GPGGQNVNKVN+K ++RF++  A W+++ +R+++    KN+IN+ GEL+
Sbjct: 75  DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKMALTHKNKINRAGELI 134

Query: 76  ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEE----QKKKIAKMAAIGEQKRLKS 135
           ++S  +R Q  N+ D L+K++ +I  AS     PS+E    QK +I  M     ++RL+ 
Sbjct: 135 LTSEYSRYQFRNLADCLQKIRDMIAEASQPATEPSKEDAALQKLRIENM----NRERLRK 193

[Close]

BLAST of Lag0017583 vs. ExPASy TrEMBL
Match: A0A6J1DF18 (peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111020443 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 6.5e-56
Identity = 117/119 (98.32%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 16  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 75
           +HVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV
Sbjct: 98  DHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 157

Query: 76  ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKL 135
           ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKK+
Sbjct: 158 ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKI 216

[Close]

BLAST of Lag0017583 vs. ExPASy TrEMBL
Match: A0A2C9WIQ0 (RF_PROK_I domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_01G073500 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 4.2e-55
Identity = 116/118 (98.31%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 16  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 75
           +HVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV
Sbjct: 99  DHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 158

Query: 76  ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKK 134
           ISSTKTRTQKGNIEDAL KLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKK
Sbjct: 159 ISSTKTRTQKGNIEDALSKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKK 216

[Close]

BLAST of Lag0017583 vs. ExPASy TrEMBL
Match: A0A6J1HN26 (peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111465103 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.7e-54
Identity = 114/119 (95.80%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 16  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 75
           +HVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLS+RIRE+IMQ EKNRINKDGELV
Sbjct: 99  DHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSERIREKIMQTEKNRINKDGELV 158

Query: 76  ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKL 135
           ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKK+
Sbjct: 159 ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKV 217

[Close]

BLAST of Lag0017583 vs. ExPASy TrEMBL
Match: A0A6J1E5G6 (peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430949 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.7e-54
Identity = 114/119 (95.80%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 16  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 75
           +HVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLS+RIRE+IMQ EKNRINKDGELV
Sbjct: 99  DHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSERIREKIMQTEKNRINKDGELV 158

Query: 76  ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKL 135
           ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKK+
Sbjct: 159 ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKV 217

[Close]

BLAST of Lag0017583 vs. ExPASy TrEMBL
Match: A0A7N2REG6 (RF_PROK_I domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 3.6e-54
Identity = 117/133 (87.97%), Postives = 121/133 (90.98%), Query Frame = 0


Query: 2   PFPSIAAEHQVKCSNHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIM 61
           P P I  E       HVTVNFARSGGPGGQNVNKVNTKVDMRFNV++AYWLSDRIRE+IM
Sbjct: 89  PIPKITLE-------HVTVNFARSGGPGGQNVNKVNTKVDMRFNVENAYWLSDRIREKIM 148

Query: 62  QMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMA 121
           QMEKNRINKDGELVISSTKTRTQKGNIEDAL KLQAIIDAASYVPPPPSEEQKKKIAKMA
Sbjct: 149 QMEKNRINKDGELVISSTKTRTQKGNIEDALAKLQAIIDAASYVPPPPSEEQKKKIAKMA 208

Query: 122 AIGEQKRLKSKKL 135
           AIGEQKRLKSKK+
Sbjct: 209 AIGEQKRLKSKKV 214

[Close]

BLAST of Lag0017583 vs. TAIR 10
Match: AT1G62850.2 (Class I peptide chain release factor )

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-51
Identity = 102/119 (85.71%), Postives = 113/119 (94.96%), Query Frame = 0


Query: 16  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 75
           ++VT+NFARSGGPGGQNVNK+NTKVDMRFNVK+AYWLSDRIRE+I+  EKNRINKDGELV
Sbjct: 102 DNVTLNFARSGGPGGQNVNKLNTKVDMRFNVKNAYWLSDRIREKILLTEKNRINKDGELV 161

Query: 76  ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKL 135
           ISSTKTRTQKGNI+DALEKLQAIIDAASYVPPPPSEEQKKKI K+AA  + KRLKSKK+
Sbjct: 162 ISSTKTRTQKGNIDDALEKLQAIIDAASYVPPPPSEEQKKKIVKLAAKADNKRLKSKKV 220

[Close]

BLAST of Lag0017583 vs. TAIR 10
Match: AT1G62850.3 (Class I peptide chain release factor )

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-51
Identity = 102/119 (85.71%), Postives = 113/119 (94.96%), Query Frame = 0


Query: 16  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELV 75
           ++VT+NFARSGGPGGQNVNK+NTKVDMRFNVK+AYWLSDRIRE+I+  EKNRINKDGELV
Sbjct: 102 DNVTLNFARSGGPGGQNVNKLNTKVDMRFNVKNAYWLSDRIREKILLTEKNRINKDGELV 161

Query: 76  ISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKL 135
           ISSTKTRTQKGNI+DALEKLQAIIDAASYVPPPPSEEQKKKI K+AA  + KRLKSKK+
Sbjct: 162 ISSTKTRTQKGNIDDALEKLQAIIDAASYVPPPPSEEQKKKIVKLAAKADNKRLKSKKV 220

The following BLAST results are available for this feature:

BLAST of Lag0017583 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152820.1	1.3e-55	98.32	peptidyl-tRNA hydrolase ICT1, mitochondrial [Momordica charantia]	[more]
KAF7828375.1	5.1e-55	89.47	peptidyl-tRNA hydrolase ICT1, mitochondrial [Senna tora]	[more]
XP_021691536.1	5.1e-55	91.27	peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X2 [Hevea brasiliensis]	[more]
XP_021616566.1	8.7e-55	98.31	peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X1 [Manihot esculenta] >KAG8...	[more]
XP_038876872.1	4.3e-54	95.80	peptidyl-tRNA hydrolase ICT1, mitochondrial [Benincasa hispida] >XP_038876873.1 ...	[more]

BLAST of Lag0017583 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8R035	4.7e-19	40.00	Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl58 P...	[more]
B5XAM2	8.0e-19	42.86	Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Salmo salar OX=8030 GN=mrpl58 PE=...	[more]
D2HD32	2.0e-17	37.82	Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Ailuropoda melanoleuca OX=9646 GN...	[more]
Q14197	2.6e-17	37.82	Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL58 PE...	[more]
Q3T116	1.7e-16	38.21	Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Bos taurus OX=9913 GN=MRPL58 PE=2...	[more]

BLAST of Lag0017583 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DF18	6.5e-56	98.32	peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A2C9WIQ0	4.2e-55	98.31	RF_PROK_I domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_01G073...	[more]
A0A6J1HN26	2.7e-54	95.80	peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1E5G6	2.7e-54	95.80	peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A7N2REG6	3.6e-54	87.97	RF_PROK_I domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Lag0017583 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62850.2	1.3e-51	85.71	Class I peptide chain release factor	[more]
AT1G62850.3	1.3e-51	85.71	Class I peptide chain release factor	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000352	Peptide chain release factor class I	PFAM	PF00472	RF-1	coord: 16..132 e-value: 8.4E-18 score: 64.4
IPR000352	Peptide chain release factor class I	PROSITE	PS00745	RF_PROK_I	coord: 24..40
None	No IPR available	GENE3D	3.30.160.20		coord: 8..143 e-value: 4.0E-39 score: 135.5
None	No IPR available	PANTHER	PTHR47352	CLASS I PEPTIDE CHAIN RELEASE FACTOR	coord: 15..135
None	No IPR available	PANTHER	PTHR47352:SF1	CLASS I PEPTIDE CHAIN RELEASE FACTOR	coord: 15..135
None	No IPR available	SUPERFAMILY	110916	Peptidyl-tRNA hydrolase domain-like	coord: 16..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017583.1	Lag0017583.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006415	translational termination
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003747	translation release factor activity