Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGACAAATGTTTGAGATTTATTTTACATACAAATGGTCATGTGATTGATGGTGTAGATGGAGTTGAATATGATCGACCAGCATGTGGTGGTTTCACTGTTAATGCTCGTAGTGGGGTTGTCTTTGAACAATTTGTTGAAATGATAGGAGCATCGTTGGGTGTAAAAGTTAGGGAAAATCAATTAGAGATAGTGTATAGACAACCTGAAGTAACACCATTGGGATCAGTTAGATTTATACCAATATCTATCCCTAACAATCAAACGATGAATTTAATGTTTTCAATTGCGTTGCCTGTCCCAAATGTTGTACACTTATATGTCAATGTCAGAAGAATAGAAGATAATGTACAAAATTTTGGAGAAATTCCCAACCAATGTATTGAACCTAGCCAATGCATGATCTTGAGCCTGAATCAGTACCACCACCATGTGATGGTGAAGATGTAGTTGTAGATAATAATTTTAAAGAGTTAAGGACCGAAACAAATGATGAATTTGAAGATTTGGAATTTGATGATCGTGAACATACCATCCCTTCAGTAGTATTCACCCAACTAGATGGTCACACGGTAGATAGCACTATAGAACACGACCCAGTTGTAGCACCGGTGCCAGTTCAAAATGATCTGTTGTACAAGGGTTTGATTTTTCAAGACAAAGAGATTCTTCAACATGTGGTGAAACACTTTTTTGTTAAGTGTCACTCACCTTACAAAGTTGTCGAGTCAAACGTCGGCGATTTGGGCAATAAGATGTATAAAGTGGAAAGATGATTGCAAATGGTGACTTCGTGCCATAAAAAAAGTCTCATAGACTTTGAGAGATCACTAAGTATGTTGATCCTCACTCATGTTTCTACTCAGAATTGAATCAGAGTCATTTGCAGTTAGATTCAACAATGATTGCAATGGAATTTTGCGAGACTGTGAAGGAGCAACCTTCTATCAGTGTGTTGAAACTACAATCAAAGATAAAAGAAAAATCTGGGTACCACGTTCCTTACCACAGGATTGTGGGGAGGAAAAAGAAAAGTCTTGGTTAA
mRNA sequence
ATGGAAGACAAATGTTTGAGATTTATTTTACATACAAATGGTCATGTGATTGATGGTGTAGATGGAGTTGAATATGATCGACCAGCATGTGGTGGTTTCACTGTTAATGCTCGTAGTGGGGTTGTCTTTGAACAATTTGTTGAAATGATAGGAGCATCGTTGGGTGTAAAACCAATGCATGATCTTGAGCCTGAATCAGTACCACCACCATGTGATGGTGAAGATGTAGTTGTAGATAATAATTTTAAAGAGTTAAGGACCGAAACAAATGATGAATTTGAAGATTTGGAATTTGATGATCGTGAACATACCATCCCTTCAGTAGTATTCACCCAACTAGATGGTCACACGGTAGATAGCACTATAGAACACGACCCAGTTGTAGCACCGGTGCCAGTTCAAAATGATCTGTTGTACAAGGAATTGAATCAGAGTCATTTGCAGTTAGATTCAACAATGATTGCAATGGAATTTTGCGAGACTGTGAAGGAGCAACCTTCTATCAGTGTGTTGAAACTACAATCAAAGATAAAAGAAAAATCTGGGTACCACGTTCCTTACCACAGGATTGTGGGGAGGAAAAAGAAAAGTCTTGGTTAA
Coding sequence (CDS)
ATGGAAGACAAATGTTTGAGATTTATTTTACATACAAATGGTCATGTGATTGATGGTGTAGATGGAGTTGAATATGATCGACCAGCATGTGGTGGTTTCACTGTTAATGCTCGTAGTGGGGTTGTCTTTGAACAATTTGTTGAAATGATAGGAGCATCGTTGGGTGTAAAACCAATGCATGATCTTGAGCCTGAATCAGTACCACCACCATGTGATGGTGAAGATGTAGTTGTAGATAATAATTTTAAAGAGTTAAGGACCGAAACAAATGATGAATTTGAAGATTTGGAATTTGATGATCGTGAACATACCATCCCTTCAGTAGTATTCACCCAACTAGATGGTCACACGGTAGATAGCACTATAGAACACGACCCAGTTGTAGCACCGGTGCCAGTTCAAAATGATCTGTTGTACAAGGAATTGAATCAGAGTCATTTGCAGTTAGATTCAACAATGATTGCAATGGAATTTTGCGAGACTGTGAAGGAGCAACCTTCTATCAGTGTGTTGAAACTACAATCAAAGATAAAAGAAAAATCTGGGTACCACGTTCCTTACCACAGGATTGTGGGGAGGAAAAAGAAAAGTCTTGGTTAA
Protein sequence
MEDKCLRFILHTNGHVIDGVDGVEYDRPACGGFTVNARSGVVFEQFVEMIGASLGVKPMHDLEPESVPPPCDGEDVVVDNNFKELRTETNDEFEDLEFDDREHTIPSVVFTQLDGHTVDSTIEHDPVVAPVPVQNDLLYKELNQSHLQLDSTMIAMEFCETVKEQPSISVLKLQSKIKEKSGYHVPYHRIVGRKKKSLG
Homology
BLAST of Lag0017573 vs. NCBI nr
Match:
KAA0041167.1 (uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa])
HSP 1 Score: 172.6 bits (436), Expect = 3.5e-39
Identity = 102/286 (35.66%), Postives = 149/286 (52.10%), Query Frame = 0
Query: 1 MEDKCLRFILHTNGHVIDGVDGVEYDRPACGGFTVNARSGVVFEQFVEMIGASLGVK-PM 60
M DK L F+L NG++IDG DG++YD+PACGGFT++ SG+VFEQF+E++G+S+G+ +
Sbjct: 1 MADKILGFMLFVNGNMIDGSDGIDYDQPACGGFTISVNSGIVFEQFIEIVGSSVGIDIRI 60
Query: 61 HDLE-----PESVPPPC------------------------------------------- 120
D+E P+ P
Sbjct: 61 SDIEIIYRHPDLTPSGLIRFMPFPIPNEQAMKTMFSIAMPISNMVHLYVNVSRVSLDINL 120
Query: 121 ---------------------------DGEDVVVDNNFKELRTETN---DEFEDLEFDDR 180
D E+++ +N+ + RTE + DEFE+ +FD R
Sbjct: 121 NSKSFCQLEDRTQVIVPDSELVASLVYDDEEMMANNDNIDFRTEIDDEFDEFEEFDFDGR 180
Query: 181 EHTIPSVVFTQLDGHTVDSTIEHDPVVAPVPVQNDLLYKEL---------NQSHLQLDST 199
EH +PS TQ+D +DS EHDP+VAP+ V N LYK + + SH+QLDS+
Sbjct: 181 EHELPSNTLTQIDMDVIDSIREHDPIVAPMVVDNSELYKGMICQDKETLQHMSHVQLDSS 240
BLAST of Lag0017573 vs. NCBI nr
Match:
TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 115.9 bits (289), Expect = 3.9e-22
Identity = 80/227 (35.24%), Postives = 104/227 (45.81%), Query Frame = 0
Query: 53 SLGVKPMH-----DLEPES-VPPPCDGEDVVVDNNFKELRTETNDEFEDLEFDDREHTIP 112
+L V+P + D+EPES PP C E++V N + E RTET+DEFE+++FD E+ +P
Sbjct: 71 NLNVEPRYVEEYVDVEPESDAPPVCHEEEMVATNEYTEFRTETDDEFEEMDFDGCEYEVP 130
Query: 113 SVVFTQLDGHTVDSTIEHDPVVAPVPVQNDLL---------------------------- 172
S FT LD + VD EHDP++ P+ N L
Sbjct: 131 SNTFTDLDMNAVDVIQEHDPIIVPMVTDNTKLYTGMICENKKMLQHMVKCFAIKSHAPYE 190
Query: 173 -----------------------------------------------YKELNQSHLQLDS 199
Y EL+QSH+QLDS
Sbjct: 191 VVESTPTKWVIRCKKSNEGCKWRLRAIMKKSHGLFEITKLSDQHTCFYSELSQSHVQLDS 250
BLAST of Lag0017573 vs. NCBI nr
Match:
KAA0034014.1 (uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa])
HSP 1 Score: 115.5 bits (288), Expect = 5.1e-22
Identity = 79/226 (34.96%), Postives = 104/226 (46.02%), Query Frame = 0
Query: 53 SLGVKPMH-----DLEPES-VPPPCDGEDVVVDNNFKELRTETNDEFEDLEFDDREHTIP 112
+L V+P + D+EPES PP C E++V N + E RTET+DEFE+++FD E+ +P
Sbjct: 71 NLNVEPRYVEEYVDVEPESDAPPVCHEEEMVATNEYTEFRTETDDEFEEMDFDGCEYEVP 130
Query: 113 SVVFTQLDGHTVDSTIEHDPVVAPVPVQNDLL---------------------------- 172
S FT LD + VD+ EHDP++ P+ N L
Sbjct: 131 SNTFTDLDMNAVDAIQEHDPIIVPMVTDNTKLYTGMICENKEMMQHMVKCFAIKSHAPYE 190
Query: 173 -----------------------------------------------YKELNQSHLQLDS 198
Y EL+QSH+QLDS
Sbjct: 191 VVESTPTKWVIRCKKSNEGCKWRLRAIMKKSHGLFEITKLSDQHTCFYSELSQSHVQLDS 250
BLAST of Lag0017573 vs. NCBI nr
Match:
KAA0036768.1 (uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa])
HSP 1 Score: 112.1 bits (279), Expect = 5.6e-21
Identity = 79/227 (34.80%), Postives = 103/227 (45.37%), Query Frame = 0
Query: 53 SLGVKPMH-----DLEPES-VPPPCDGEDVVVDNNFKELRTETNDEFEDLEFDDREHTIP 112
+L V+P + D+EPES P C E++V N + E RTET+DEFE+++FD E+ +P
Sbjct: 71 NLNVEPRYVEEYVDVEPESDAPLVCHEEEMVATNEYTEFRTETDDEFEEMDFDGCEYEVP 130
Query: 113 SVVFTQLDGHTVDSTIEHDPVVAPVPVQNDLL---------------------------- 172
S FT LD + VD EHDP++ P+ N L
Sbjct: 131 SNTFTDLDMNAVDVIQEHDPIIVPMVTDNTKLYTGMICENKKMLQHMVKCFAIKSHAPYE 190
Query: 173 -----------------------------------------------YKELNQSHLQLDS 199
Y EL+QSH+QLDS
Sbjct: 191 VVESTPTKWVIRCKKSNEGCKWRLRAIMKKSHGLFEITKLSDQHTCFYSELSQSHVQLDS 250
BLAST of Lag0017573 vs. NCBI nr
Match:
KAA0040476.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa] >TYK23484.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 109.4 bits (272), Expect = 3.7e-20
Identity = 75/218 (34.40%), Postives = 98/218 (44.95%), Query Frame = 0
Query: 53 SLGVKPMH-----DLEPES-VPPPCDGEDVVVDNNFKELRTETNDEFEDLEFDDREHTIP 112
+L V+P + D+EPES PP C E++V N + E RTET+DEFE+++FD E+ +P
Sbjct: 71 NLNVEPRYVEEYVDVEPESNAPPVCHEEEMVATNEYTEFRTETDDEFEEMDFDGCEYEVP 130
Query: 113 SVVFTQLDGHTVDSTIEHDPVVAPVPVQNDLL---------------------------- 172
S FT LD + VD EHDP++ P+ N L
Sbjct: 131 SNKFTDLDMNAVDGIQEHDPIIVPMVTDNTKLYTGMICENKEMLQHMIKCFAIKSHAPYE 190
Query: 173 -----------------------------------------------YKELNQSHLQLDS 190
Y +L+QSH+QLDS
Sbjct: 191 VVESTPTKWVIRCKKSNEGCKWRLRAIMKKSHGLFEITKLSDQHTCFYSKLSQSHVQLDS 250
BLAST of Lag0017573 vs. ExPASy TrEMBL
Match:
A0A5A7THR5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00980 PE=4 SV=1)
HSP 1 Score: 172.6 bits (436), Expect = 1.7e-39
Identity = 102/286 (35.66%), Postives = 149/286 (52.10%), Query Frame = 0
Query: 1 MEDKCLRFILHTNGHVIDGVDGVEYDRPACGGFTVNARSGVVFEQFVEMIGASLGVK-PM 60
M DK L F+L NG++IDG DG++YD+PACGGFT++ SG+VFEQF+E++G+S+G+ +
Sbjct: 1 MADKILGFMLFVNGNMIDGSDGIDYDQPACGGFTISVNSGIVFEQFIEIVGSSVGIDIRI 60
Query: 61 HDLE-----PESVPPPC------------------------------------------- 120
D+E P+ P
Sbjct: 61 SDIEIIYRHPDLTPSGLIRFMPFPIPNEQAMKTMFSIAMPISNMVHLYVNVSRVSLDINL 120
Query: 121 ---------------------------DGEDVVVDNNFKELRTETN---DEFEDLEFDDR 180
D E+++ +N+ + RTE + DEFE+ +FD R
Sbjct: 121 NSKSFCQLEDRTQVIVPDSELVASLVYDDEEMMANNDNIDFRTEIDDEFDEFEEFDFDGR 180
Query: 181 EHTIPSVVFTQLDGHTVDSTIEHDPVVAPVPVQNDLLYKEL---------NQSHLQLDST 199
EH +PS TQ+D +DS EHDP+VAP+ V N LYK + + SH+QLDS+
Sbjct: 181 EHELPSNTLTQIDMDVIDSIREHDPIVAPMVVDNSELYKGMICQDKETLQHMSHVQLDSS 240
BLAST of Lag0017573 vs. ExPASy TrEMBL
Match:
A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)
HSP 1 Score: 115.9 bits (289), Expect = 1.9e-22
Identity = 80/227 (35.24%), Postives = 104/227 (45.81%), Query Frame = 0
Query: 53 SLGVKPMH-----DLEPES-VPPPCDGEDVVVDNNFKELRTETNDEFEDLEFDDREHTIP 112
+L V+P + D+EPES PP C E++V N + E RTET+DEFE+++FD E+ +P
Sbjct: 71 NLNVEPRYVEEYVDVEPESDAPPVCHEEEMVATNEYTEFRTETDDEFEEMDFDGCEYEVP 130
Query: 113 SVVFTQLDGHTVDSTIEHDPVVAPVPVQNDLL---------------------------- 172
S FT LD + VD EHDP++ P+ N L
Sbjct: 131 SNTFTDLDMNAVDVIQEHDPIIVPMVTDNTKLYTGMICENKKMLQHMVKCFAIKSHAPYE 190
Query: 173 -----------------------------------------------YKELNQSHLQLDS 199
Y EL+QSH+QLDS
Sbjct: 191 VVESTPTKWVIRCKKSNEGCKWRLRAIMKKSHGLFEITKLSDQHTCFYSELSQSHVQLDS 250
BLAST of Lag0017573 vs. ExPASy TrEMBL
Match:
A0A5A7SS31 (DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00820 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 2.5e-22
Identity = 79/226 (34.96%), Postives = 104/226 (46.02%), Query Frame = 0
Query: 53 SLGVKPMH-----DLEPES-VPPPCDGEDVVVDNNFKELRTETNDEFEDLEFDDREHTIP 112
+L V+P + D+EPES PP C E++V N + E RTET+DEFE+++FD E+ +P
Sbjct: 71 NLNVEPRYVEEYVDVEPESDAPPVCHEEEMVATNEYTEFRTETDDEFEEMDFDGCEYEVP 130
Query: 113 SVVFTQLDGHTVDSTIEHDPVVAPVPVQNDLL---------------------------- 172
S FT LD + VD+ EHDP++ P+ N L
Sbjct: 131 SNTFTDLDMNAVDAIQEHDPIIVPMVTDNTKLYTGMICENKEMMQHMVKCFAIKSHAPYE 190
Query: 173 -----------------------------------------------YKELNQSHLQLDS 198
Y EL+QSH+QLDS
Sbjct: 191 VVESTPTKWVIRCKKSNEGCKWRLRAIMKKSHGLFEITKLSDQHTCFYSELSQSHVQLDS 250
BLAST of Lag0017573 vs. ExPASy TrEMBL
Match:
A0A5D3DIM2 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00560 PE=4 SV=1)
HSP 1 Score: 109.4 bits (272), Expect = 1.8e-20
Identity = 75/218 (34.40%), Postives = 98/218 (44.95%), Query Frame = 0
Query: 53 SLGVKPMH-----DLEPES-VPPPCDGEDVVVDNNFKELRTETNDEFEDLEFDDREHTIP 112
+L V+P + D+EPES PP C E++V N + E RTET+DEFE+++FD E+ +P
Sbjct: 71 NLNVEPRYVEEYVDVEPESNAPPVCHEEEMVATNEYTEFRTETDDEFEEMDFDGCEYEVP 130
Query: 113 SVVFTQLDGHTVDSTIEHDPVVAPVPVQNDLL---------------------------- 172
S FT LD + VD EHDP++ P+ N L
Sbjct: 131 SNKFTDLDMNAVDGIQEHDPIIVPMVTDNTKLYTGMICENKEMLQHMIKCFAIKSHAPYE 190
Query: 173 -----------------------------------------------YKELNQSHLQLDS 190
Y +L+QSH+QLDS
Sbjct: 191 VVESTPTKWVIRCKKSNEGCKWRLRAIMKKSHGLFEITKLSDQHTCFYSKLSQSHVQLDS 250
BLAST of Lag0017573 vs. ExPASy TrEMBL
Match:
A0A1S3C4J7 (uncharacterized protein LOC103496397 OS=Cucumis melo OX=3656 GN=LOC103496397 PE=4 SV=1)
HSP 1 Score: 109.4 bits (272), Expect = 1.8e-20
Identity = 75/227 (33.04%), Postives = 103/227 (45.37%), Query Frame = 0
Query: 53 SLGVKPMH-----DLEPES-VPPPCDGEDVVVDNNFKELRTETNDEFEDLEFDDREHTIP 112
+L V+P + D++PES PP C E++V N + E RT+T+DEFE+++FD E+ +P
Sbjct: 7 NLNVEPRYVEEYVDVDPESDAPPVCHEEEMVATNEYTEFRTKTDDEFEEMDFDGCEYEVP 66
Query: 113 SVVFTQLDGHTVDSTIEHDPVVAPVPVQNDLL---------------------------- 172
S FT LD VD EHDP++ P+ + N L
Sbjct: 67 SNTFTNLDMDAVDDIQEHDPIIVPMVIDNTKLYMGMICENKEMLQHMVKCFAIKSHAPYE 126
Query: 173 -----------------------------------------------YKELNQSHLQLDS 199
Y EL+QSH+QLDS
Sbjct: 127 VVESTPTKWVIRCKKSNKGCKWRLRAIMKKSHGLFEITKLSDQHTCFYSELSQSHVQLDS 186
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0041167.1 | 3.5e-39 | 35.66 | uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa] | [more] |
| TYJ95836.1 | 3.9e-22 | 35.24 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| KAA0034014.1 | 5.1e-22 | 34.96 | uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa] | [more] |
| KAA0036768.1 | 5.6e-21 | 34.80 | uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa] | [more] |
| KAA0040476.1 | 3.7e-20 | 34.40 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7THR5 | 1.7e-39 | 35.66 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3BAB0 | 1.9e-22 | 35.24 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| A0A5A7SS31 | 2.5e-22 | 34.96 | DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
| A0A5D3DIM2 | 1.8e-20 | 34.40 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| A0A1S3C4J7 | 1.8e-20 | 33.04 | uncharacterized protein LOC103496397 OS=Cucumis melo OX=3656 GN=LOC103496397 PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
